MELO.jh034033.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh034033.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr11: 29503144 .. 29503425 (-)
RNA-Seq ExpressionMELO.jh034033.1
SyntenyMELO.jh034033.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGTTGTAATTTGTATAATGTACTTTGTGCGTGCAATTATAATATAATGAAATTGGAATCGGAACTAAAGAGATGAATGATGATGATGATGATGATGATGATTCATTGATTTGCTATTGTACGCACCTCACGGCGAGTTCATCGAATCGTTTGTTAGGTTGCCGTTGTCGGAGAACATGGAGGTCGCCGCCGGGACAAAACTCCGTCAAGAGACAGAGCCACTTCGGTGAGTCGATACTAGCATAAAGCGTCGGTAGAAATGGATGGTCCAAAGACTCCAAA

mRNA sequence

GAGTTGTAATTTGTATAATGTACTTTGTGCGTGCAATTATAATATAATGAAATTGGAATCGGAACTAAAGAGATGAATGATGATGATGATGATGATGATGATTCATTGATTTGCTATTGTACGCACCTCACGGCGAGTTCATCGAATCGTTTGTTAGGTTGCCGTTGTCGGAGAACATGGAGGTCGCCGCCGGGACAAAACTCCGTCAAGAGACAGAGCCACTTCGGTGAGTCGATACTAGCATAAAGCGTCGGTAGAAATGGATGGTCCAAAGACTCCAAA

Coding sequence (CDS)

ATGAATGATGATGATGATGATGATGATGATTCATTGATTTGCTATTGTACGCACCTCACGGCGAGTTCATCGAATCGTTTGTTAGGTTGCCGTTGTCGGAGAACATGGAGGTCGCCGCCGGGACAAAACTCCGTCAAGAGACAGAGCCACTTCGGTGAGTCGATACTAGCATAA

Protein sequence

MNDDDDDDDDSLICYCTHLTASSSNRLLGCRCRRTWRSPPGQNSVKRQSHFGESILA
Homology
[Close]
BLAST of MELO.jh034033.1 vs. NCBI nr
Match: ACR36865.1 (unknown [Zea mays])

HSP 1 Score: 50.1 bits (118), Expect = 4.14e-05
Identity = 23/40 (57.50%), Postives = 27/40 (67.50%), Query Frame = 0 

Query: 18 HLTASSSNRLLGCRCRRTWRSPPGQNSVKRQSHFGESILA 57
          +L A S   L GCRCR TWRSPPGQNS+ RQ++   S  A
Sbjct: 38 YLAACSGKCLPGCRCRSTWRSPPGQNSMTRQANRSVSKCA 77

[Close]
BLAST of MELO.jh034033.1 vs. ExPASy TrEMBL
Match: C4J6R5 (Uncharacterized protein OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.01e-05
Identity = 23/40 (57.50%), Postives = 27/40 (67.50%), Query Frame = 0 

Query: 18 HLTASSSNRLLGCRCRRTWRSPPGQNSVKRQSHFGESILA 57
          +L A S   L GCRCR TWRSPPGQNS+ RQ++   S  A
Sbjct: 38 YLAACSGKCLPGCRCRSTWRSPPGQNSMTRQANRSVSKCA 77

The following BLAST results are available for this feature:
BLAST of MELO.jh034033.1 vs. NCBI nr
Match NameE-valueIdentityDescription
ACR36865.14.14e-0557.50unknown [Zea mays][more]
BLAST of MELO.jh034033.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh034033.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
C4J6R52.01e-0557.50Uncharacterized protein OS=Zea mays OX=4577 PE=2 SV=1[more]
BLAST of MELO.jh034033.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..57

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh034033.1.t1MELO.jh034033.1.t1mRNA