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MELO.jh033958.1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCGATCGGTATAAACATCAACAACTCCGAATTGGATTAGTTTCTCCTCAACAAATAAGTGCTTGGGCCAATAAAACCCTACCGAATGGCGAGATAGTTGGAGAGGTAACAAAACCCTATACTTTTCATTACAAAACCAATAAACCTGAAAAAGATGGATTATTTTGTGAAAGAATTTTTGGGCCTATAAAAAGCGGGATTTGTGCTTGTGGAAATTATCGAGTAATCGGAGATAAAAAAGAAGATTCGAAATTTTGTGAACAATGCGGAGTCGAATTTGTTGATTCTCGGATACGAAGATATCAAATGGGCTATATTAAACTGGCATGCCCAGTAACCCATGTGTGGTATTTAAAACGTCTTCCTAGTTATATCGCGAATCTTTTAGATAAACCTCTTAAAGAATTAGAAGGCTTAGTATATTGCGATGTG ATGATCGATCGGTATAAACATCAACAACTCCGAATTGGATTAGTTTCTCCTCAACAAATAAGTGCTTGGGCCAATAAAACCCTACCGAATGGCGAGATAGTTGGAGAGGTAACAAAACCCTATACTTTTCATTACAAAACCAATAAACCTGAAAAAGATGGATTATTTTGTGAAAGAATTTTTGGGCCTATAAAAAGCGGGATTTGTGCTTGTGGAAATTATCGAGTAATCGGAGATAAAAAAGAAGATTCGAAATTTTGTGAACAATGCGGAGTCGAATTTGTTGATTCTCGGATACGAAGATATCAAATGGGCTATATTAAACTGGCATGCCCAGTAACCCATGTGTGGTATTTAAAACGTCTTCCTAGTTATATCGCGAATCTTTTAGATAAACCTCTTAAAGAATTAGAAGGCTTAGTATATTGCGATGTG ATGATCGATCGGTATAAACATCAACAACTCCGAATTGGATTAGTTTCTCCTCAACAAATAAGTGCTTGGGCCAATAAAACCCTACCGAATGGCGAGATAGTTGGAGAGGTAACAAAACCCTATACTTTTCATTACAAAACCAATAAACCTGAAAAAGATGGATTATTTTGTGAAAGAATTTTTGGGCCTATAAAAAGCGGGATTTGTGCTTGTGGAAATTATCGAGTAATCGGAGATAAAAAAGAAGATTCGAAATTTTGTGAACAATGCGGAGTCGAATTTGTTGATTCTCGGATACGAAGATATCAAATGGGCTATATTAAACTGGCATGCCCAGTAACCCATGTGTGGTATTTAAAACGTCTTCCTAGTTATATCGCGAATCTTTTAGATAAACCTCTTAAAGAATTAGAAGGCTTAGTATATTGCGATGTG MIDRYKHQQLRIGLVSPQQISAWANKTLPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGDKKEDSKFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDV Homology
BLAST of MELO.jh033958.1 vs. NCBI nr
Match: YP_009346476.1 (RNA polymerase beta [Cucumis x hytivus] >AOW71086.1 RNA polymerase beta [Cucumis x hytivus] >QDK99938.1 RpoC1 [Siraitia grosvenorii]) HSP 1 Score: 312 bits (800), Expect = 1.16e-107 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of MELO.jh033958.1 vs. NCBI nr
Match: QDH07807.1 (RpoC1 [Cucumis sativus]) HSP 1 Score: 312 bits (800), Expect = 1.71e-105 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of MELO.jh033958.1 vs. NCBI nr
Match: MBY3555948.1 (hypothetical protein [Modestobacter lapidis]) HSP 1 Score: 304 bits (778), Expect = 2.64e-104 Identity = 140/145 (96.55%), Postives = 142/145 (97.93%), Query Frame = 0
BLAST of MELO.jh033958.1 vs. NCBI nr
Match: WP_222050809.1 (hypothetical protein [Modestobacter lapidis]) HSP 1 Score: 304 bits (778), Expect = 3.36e-104 Identity = 140/145 (96.55%), Postives = 142/145 (97.93%), Query Frame = 0
BLAST of MELO.jh033958.1 vs. NCBI nr
Match: KAF5949346.1 (hypothetical protein HYC85_011339 [Camellia sinensis]) HSP 1 Score: 303 bits (777), Expect = 4.77e-104 Identity = 140/145 (96.55%), Postives = 142/145 (97.93%), Query Frame = 0
BLAST of MELO.jh033958.1 vs. ExPASy Swiss-Prot
Match: Q4VZP2 (DNA-directed RNA polymerase subunit beta' OS=Cucumis sativus OX=3659 GN=rpoC1 PE=3 SV=3) HSP 1 Score: 313.9 bits (803), Expect = 9.3e-85 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of MELO.jh033958.1 vs. ExPASy Swiss-Prot
Match: B1A926 (DNA-directed RNA polymerase subunit beta' OS=Carica papaya OX=3649 GN=rpoC1 PE=3 SV=1) HSP 1 Score: 307.0 bits (785), Expect = 1.1e-82 Identity = 140/144 (97.22%), Postives = 142/144 (98.61%), Query Frame = 0
BLAST of MELO.jh033958.1 vs. ExPASy Swiss-Prot
Match: A6MM27 (DNA-directed RNA polymerase subunit beta' OS=Buxus microphylla OX=153571 GN=rpoC1 PE=3 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 1.9e-82 Identity = 139/144 (96.53%), Postives = 142/144 (98.61%), Query Frame = 0
BLAST of MELO.jh033958.1 vs. ExPASy Swiss-Prot
Match: A6MMB3 (DNA-directed RNA polymerase subunit beta' OS=Chloranthus spicatus OX=13006 GN=rpoC1 PE=3 SV=1) HSP 1 Score: 305.8 bits (782), Expect = 2.5e-82 Identity = 140/145 (96.55%), Postives = 142/145 (97.93%), Query Frame = 0
BLAST of MELO.jh033958.1 vs. ExPASy Swiss-Prot
Match: A4QK09 (DNA-directed RNA polymerase subunit beta' OS=Arabis hirsuta OX=78191 GN=rpoC1 PE=3 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 4.3e-82 Identity = 138/144 (95.83%), Postives = 141/144 (97.92%), Query Frame = 0
BLAST of MELO.jh033958.1 vs. ExPASy TrEMBL
Match: A0A1P8C7P4 (DNA-directed RNA polymerase OS=Cucumis x hytivus OX=442738 GN=rpoC1 PE=4 SV=1) HSP 1 Score: 312 bits (800), Expect = 5.62e-108 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of MELO.jh033958.1 vs. ExPASy TrEMBL
Match: A0A515BLK7 (DNA-directed RNA polymerase OS=Siraitia grosvenorii OX=190515 GN=rpoC1 PE=4 SV=1) HSP 1 Score: 312 bits (800), Expect = 5.62e-108 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of MELO.jh033958.1 vs. ExPASy TrEMBL
Match: A0A513X1K3 (DNA-directed RNA polymerase OS=Cucumis sativus OX=3659 GN=rpoC1 PE=4 SV=1) HSP 1 Score: 312 bits (800), Expect = 8.30e-106 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of MELO.jh033958.1 vs. ExPASy TrEMBL
Match: A0A7J7HC24 (DNA-directed RNA polymerase OS=Camellia sinensis OX=4442 GN=HYC85_011339 PE=4 SV=1) HSP 1 Score: 303 bits (777), Expect = 2.31e-104 Identity = 140/145 (96.55%), Postives = 142/145 (97.93%), Query Frame = 0
BLAST of MELO.jh033958.1 vs. ExPASy TrEMBL
Match: A0A7J7KX65 (DNA-directed RNA polymerase OS=Kingdonia uniflora OX=39325 GN=GIB67_021735 PE=4 SV=1) HSP 1 Score: 303 bits (776), Expect = 2.58e-104 Identity = 140/145 (96.55%), Postives = 142/145 (97.93%), Query Frame = 0
BLAST of MELO.jh033958.1 vs. TAIR 10
Match: ATCG00180.1 (DNA-directed RNA polymerase family protein ) HSP 1 Score: 303.5 bits (776), Expect = 9.0e-83 Identity = 138/144 (95.83%), Postives = 140/144 (97.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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