MELO.jh033482.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh033482.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionBeta-galactosidase
Locationchr05: 22430725 .. 22430919 (-)
RNA-Seq ExpressionMELO.jh033482.1
SyntenyMELO.jh033482.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATAGATTCACACCCAAATTCATTACAAGCTACTGCCTTTTTATATGGTAGTTGTTTTATCTTCTATGACACAGGATTGGCTAGGCAACCTAAGTGGGGTCACTTGAGAGATGTTCATAAAGCTATAAAGATGTGCGAAAAAGCATTAGTGAGTACAAATCCTGTAGTTACTTCTCTTGGTCAAAATTAG

mRNA sequence

ATGGATATAGATTCACACCCAAATTCATTACAAGCTACTGCCTTTTTATATGGTAGTTGTTTTATCTTCTATGACACAGGATTGGCTAGGCAACCTAAGTGGGGTCACTTGAGAGATGTTCATAAAGCTATAAAGATGTGCGAAAAAGCATTAGTGAGTACAAATCCTGTAGTTACTTCTCTTGGTCAAAATTAG

Coding sequence (CDS)

ATGGATATAGATTCACACCCAAATTCATTACAAGCTACTGCCTTTTTATATGGTAGTTGTTTTATCTTCTATGACACAGGATTGGCTAGGCAACCTAAGTGGGGTCACTTGAGAGATGTTCATAAAGCTATAAAGATGTGCGAAAAAGCATTAGTGAGTACAAATCCTGTAGTTACTTCTCTTGGTCAAAATTAG

Protein sequence

MDIDSHPNSLQATAFLYGSCFIFYDTGLARQPKWGHLRDVHKAIKMCEKALVSTNPVVTSLGQN
Homology
[Close]
BLAST of MELO.jh033482.1 vs. NCBI nr
Match: KAE8672290.1 (hypothetical protein F3Y22_tig00111847pilonHSYRG00125 [Hibiscus syriacus])

HSP 1 Score: 73.6 bits (179), Expect = 4.21e-14
Identity = 30/48 (62.50%), Postives = 39/48 (81.25%), Query Frame = 0 

Query: 17  YGSCFIFYDTGLARQPKWGHLRDVHKAIKMCEKALVSTNPVVTSLGQN 64
           YG+    Y  GL RQPKWGHLRDVHKAIK+CE+A+++T+P ++SLG N
Sbjct: 127 YGNIDSAYGAGLVRQPKWGHLRDVHKAIKLCEEAMIATDPTISSLGPN 174

[Close]
BLAST of MELO.jh033482.1 vs. NCBI nr
Match: KAG7019243.1 (Beta-galactosidase 8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 75.1 bits (183), Expect = 8.49e-14
Identity = 37/53 (69.81%), Postives = 42/53 (79.25%), Query Frame = 0 

Query: 12  ATAFLYGSCFIFYDTGLARQPKWGHLRDVHKAIKMCEKALVSTNPVVTSLGQN 64
           AT++ Y +    Y  GL RQPKWGHLR+VHKAIKMCEKALVST P V+SLGQN
Sbjct: 309 ATSYDYDAPIDEY--GLVRQPKWGHLREVHKAIKMCEKALVSTEPAVSSLGQN 359

[Close]
BLAST of MELO.jh033482.1 vs. NCBI nr
Match: XP_022964792.1 (beta-galactosidase 8-like [Cucurbita moschata])

HSP 1 Score: 75.1 bits (183), Expect = 8.49e-14
Identity = 37/53 (69.81%), Postives = 42/53 (79.25%), Query Frame = 0 

Query: 12  ATAFLYGSCFIFYDTGLARQPKWGHLRDVHKAIKMCEKALVSTNPVVTSLGQN 64
           AT++ Y +    Y  GL RQPKWGHLR+VHKAIKMCEKALVST P V+SLGQN
Sbjct: 309 ATSYDYDAPIDEY--GLVRQPKWGHLREVHKAIKMCEKALVSTEPAVSSLGQN 359

[Close]
BLAST of MELO.jh033482.1 vs. NCBI nr
Match: KAG6583488.1 (Beta-galactosidase 8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 75.1 bits (183), Expect = 8.50e-14
Identity = 37/53 (69.81%), Postives = 42/53 (79.25%), Query Frame = 0 

Query: 12  ATAFLYGSCFIFYDTGLARQPKWGHLRDVHKAIKMCEKALVSTNPVVTSLGQN 64
           AT++ Y +    Y  GL RQPKWGHLR+VHKAIKMCEKALVST P V+SLGQN
Sbjct: 384 ATSYDYDAPIDEY--GLVRQPKWGHLREVHKAIKMCEKALVSTEPAVSSLGQN 434

[Close]
BLAST of MELO.jh033482.1 vs. NCBI nr
Match: XP_004148770.1 (beta-galactosidase 8 [Cucumis sativus] >KAE8652735.1 hypothetical protein Csa_014351 [Cucumis sativus])

HSP 1 Score: 74.7 bits (182), Expect = 1.16e-13
Identity = 37/53 (69.81%), Postives = 42/53 (79.25%), Query Frame = 0 

Query: 12  ATAFLYGSCFIFYDTGLARQPKWGHLRDVHKAIKMCEKALVSTNPVVTSLGQN 64
           AT++ Y +    Y  GL RQPKWGHLRDVHKAIKMCE+ALVST+P VTSLG N
Sbjct: 309 ATSYDYDAPIDEY--GLVRQPKWGHLRDVHKAIKMCEEALVSTDPAVTSLGPN 359

[Close]
BLAST of MELO.jh033482.1 vs. ExPASy Swiss-Prot
Match: P45582 (Beta-galactosidase OS=Asparagus officinalis OX=4686 PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 6.1e-12
Identity = 30/38 (78.95%), Postives = 33/38 (86.84%), Query Frame = 0 

Query: 27  GLARQPKWGHLRDVHKAIKMCEKALVSTNPVVTSLGQN 65
           GL RQPKWGHLRD+HKAIK+CE ALVS  P +TSLGQN
Sbjct: 322 GLLRQPKWGHLRDLHKAIKLCEPALVSGEPTITSLGQN 359

[Close]
BLAST of MELO.jh033482.1 vs. ExPASy Swiss-Prot
Match: Q9SCV4 (Beta-galactosidase 8 OS=Arabidopsis thaliana OX=3702 GN=BGAL8 PE=2 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 7.9e-12
Identity = 28/38 (73.68%), Postives = 34/38 (89.47%), Query Frame = 0 

Query: 27  GLARQPKWGHLRDVHKAIKMCEKALVSTNPVVTSLGQN 65
           GL RQPKWGHLRD+HKAIK+CE AL++T+P +TSLG N
Sbjct: 327 GLLRQPKWGHLRDLHKAIKLCEDALIATDPTITSLGSN 364

[Close]
BLAST of MELO.jh033482.1 vs. ExPASy Swiss-Prot
Match: Q10NX8 (Beta-galactosidase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0255100 PE=1 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 6.7e-11
Identity = 31/53 (58.49%), Postives = 39/53 (73.58%), Query Frame = 0 

Query: 12  ATAFLYGSCFIFYDTGLARQPKWGHLRDVHKAIKMCEKALVSTNPVVTSLGQN 65
           AT++ Y +    Y  G+ RQPKWGHLRDVHKAIK+CE AL++  P  +SLGQN
Sbjct: 315 ATSYDYDAPIDEY--GMVRQPKWGHLRDVHKAIKLCEPALIAAEPSYSSLGQN 365

[Close]
BLAST of MELO.jh033482.1 vs. ExPASy Swiss-Prot
Match: P48981 (Beta-galactosidase OS=Malus domestica OX=3750 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.1e-10
Identity = 32/53 (60.38%), Postives = 38/53 (71.70%), Query Frame = 0 

Query: 12  ATAFLYGSCFIFYDTGLARQPKWGHLRDVHKAIKMCEKALVSTNPVVTSLGQN 65
           AT++ Y +    Y  GL R+PKWGHLRD+HKAIK CE ALVS +P VT LG N
Sbjct: 308 ATSYDYDAPLDEY--GLPREPKWGHLRDLHKAIKSCESALVSVDPSVTKLGSN 358

[Close]
BLAST of MELO.jh033482.1 vs. ExPASy Swiss-Prot
Match: Q9SCV9 (Beta-galactosidase 3 OS=Arabidopsis thaliana OX=3702 GN=BGAL3 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 4.4e-10
Identity = 27/36 (75.00%), Postives = 34/36 (94.44%), Query Frame = 0 

Query: 27  GLARQPKWGHLRDVHKAIKMCEKALVSTNPVVTSLG 63
           GL RQPK+GHL+++H+AIKMCEKALVS +PVVTS+G
Sbjct: 328 GLIRQPKYGHLKELHRAIKMCEKALVSADPVVTSIG 363

[Close]
BLAST of MELO.jh033482.1 vs. ExPASy TrEMBL
Match: A0A6A2XR00 (Beta-galactosidase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111847pilonHSYRG00125 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.04e-14
Identity = 30/48 (62.50%), Postives = 39/48 (81.25%), Query Frame = 0 

Query: 17  YGSCFIFYDTGLARQPKWGHLRDVHKAIKMCEKALVSTNPVVTSLGQN 64
           YG+    Y  GL RQPKWGHLRDVHKAIK+CE+A+++T+P ++SLG N
Sbjct: 127 YGNIDSAYGAGLVRQPKWGHLRDVHKAIKLCEEAMIATDPTISSLGPN 174

[Close]
BLAST of MELO.jh033482.1 vs. ExPASy TrEMBL
Match: A0A6J1HIP2 (Beta-galactosidase OS=Cucurbita moschata OX=3662 GN=LOC111464792 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 4.11e-14
Identity = 37/53 (69.81%), Postives = 42/53 (79.25%), Query Frame = 0 

Query: 12  ATAFLYGSCFIFYDTGLARQPKWGHLRDVHKAIKMCEKALVSTNPVVTSLGQN 64
           AT++ Y +    Y  GL RQPKWGHLR+VHKAIKMCEKALVST P V+SLGQN
Sbjct: 309 ATSYDYDAPIDEY--GLVRQPKWGHLREVHKAIKMCEKALVSTEPAVSSLGQN 359

[Close]
BLAST of MELO.jh033482.1 vs. ExPASy TrEMBL
Match: A0A0A0LUR1 (Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_1G085360 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 5.60e-14
Identity = 37/53 (69.81%), Postives = 42/53 (79.25%), Query Frame = 0 

Query: 12  ATAFLYGSCFIFYDTGLARQPKWGHLRDVHKAIKMCEKALVSTNPVVTSLGQN 64
           AT++ Y +    Y  GL RQPKWGHLRDVHKAIKMCE+ALVST+P VTSLG N
Sbjct: 261 ATSYDYDAPIDEY--GLVRQPKWGHLRDVHKAIKMCEEALVSTDPAVTSLGPN 311

[Close]
BLAST of MELO.jh033482.1 vs. ExPASy TrEMBL
Match: A0A5A7UQ64 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G00480 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 7.67e-14
Identity = 36/53 (67.92%), Postives = 42/53 (79.25%), Query Frame = 0 

Query: 12  ATAFLYGSCFIFYDTGLARQPKWGHLRDVHKAIKMCEKALVSTNPVVTSLGQN 64
           AT++ Y +    Y  GL RQPKWGHLRDVHKAIKMCE+AL+ST+P VTSLG N
Sbjct: 309 ATSYDYDAPIDEY--GLVRQPKWGHLRDVHKAIKMCEEALISTDPAVTSLGPN 359

[Close]
BLAST of MELO.jh033482.1 vs. ExPASy TrEMBL
Match: A0A5D3BCM5 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G00120 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 7.67e-14
Identity = 36/53 (67.92%), Postives = 42/53 (79.25%), Query Frame = 0 

Query: 12  ATAFLYGSCFIFYDTGLARQPKWGHLRDVHKAIKMCEKALVSTNPVVTSLGQN 64
           AT++ Y +    Y  GL RQPKWGHLRDVHKAIKMCE+AL+ST+P VTSLG N
Sbjct: 309 ATSYDYDAPIDEY--GLVRQPKWGHLRDVHKAIKMCEEALISTDPAVTSLGPN 359

[Close]
BLAST of MELO.jh033482.1 vs. TAIR 10
Match: AT2G28470.1 (beta-galactosidase 8 )

HSP 1 Score: 70.5 bits (171), Expect = 5.6e-13
Identity = 28/38 (73.68%), Postives = 34/38 (89.47%), Query Frame = 0 

Query: 27  GLARQPKWGHLRDVHKAIKMCEKALVSTNPVVTSLGQN 65
           GL RQPKWGHLRD+HKAIK+CE AL++T+P +TSLG N
Sbjct: 327 GLLRQPKWGHLRDLHKAIKLCEDALIATDPTITSLGSN 364

[Close]
BLAST of MELO.jh033482.1 vs. TAIR 10
Match: AT2G28470.2 (beta-galactosidase 8 )

HSP 1 Score: 70.5 bits (171), Expect = 5.6e-13
Identity = 28/38 (73.68%), Postives = 34/38 (89.47%), Query Frame = 0 

Query: 27  GLARQPKWGHLRDVHKAIKMCEKALVSTNPVVTSLGQN 65
           GL RQPKWGHLRD+HKAIK+CE AL++T+P +TSLG N
Sbjct: 321 GLLRQPKWGHLRDLHKAIKLCEDALIATDPTITSLGSN 358

[Close]
BLAST of MELO.jh033482.1 vs. TAIR 10
Match: AT4G36360.1 (beta-galactosidase 3 )

HSP 1 Score: 64.7 bits (156), Expect = 3.1e-11
Identity = 27/36 (75.00%), Postives = 34/36 (94.44%), Query Frame = 0 

Query: 27  GLARQPKWGHLRDVHKAIKMCEKALVSTNPVVTSLG 63
           GL RQPK+GHL+++H+AIKMCEKALVS +PVVTS+G
Sbjct: 328 GLIRQPKYGHLKELHRAIKMCEKALVSADPVVTSIG 363

[Close]
BLAST of MELO.jh033482.1 vs. TAIR 10
Match: AT4G36360.2 (beta-galactosidase 3 )

HSP 1 Score: 64.7 bits (156), Expect = 3.1e-11
Identity = 27/36 (75.00%), Postives = 34/36 (94.44%), Query Frame = 0 

Query: 27  GLARQPKWGHLRDVHKAIKMCEKALVSTNPVVTSLG 63
           GL RQPK+GHL+++H+AIKMCEKALVS +PVVTS+G
Sbjct: 328 GLIRQPKYGHLKELHRAIKMCEKALVSADPVVTSIG 363

[Close]
BLAST of MELO.jh033482.1 vs. TAIR 10
Match: AT3G13750.1 (beta galactosidase 1 )

HSP 1 Score: 58.2 bits (139), Expect = 2.9e-09
Identity = 28/51 (54.90%), Postives = 35/51 (68.63%), Query Frame = 0 

Query: 12  ATAFLYGSCFIFYDTGLARQPKWGHLRDVHKAIKMCEKALVSTNPVVTSLG 63
           AT++ Y +    Y  GL RQPKWGHL+D+H+AIK+CE ALVS  P    LG
Sbjct: 316 ATSYDYDAPLDEY--GLERQPKWGHLKDLHRAIKLCEPALVSGEPTRMPLG 364

The following BLAST results are available for this feature:
BLAST of MELO.jh033482.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8672290.14.21e-1462.50hypothetical protein F3Y22_tig00111847pilonHSYRG00125 [Hibiscus syriacus][more]
KAG7019243.18.49e-1469.81Beta-galactosidase 8 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022964792.18.49e-1469.81beta-galactosidase 8-like [Cucurbita moschata][more]
KAG6583488.18.50e-1469.81Beta-galactosidase 8, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_004148770.11.16e-1369.81beta-galactosidase 8 [Cucumis sativus] >KAE8652735.1 hypothetical protein Csa_01... [more]
BLAST of MELO.jh033482.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P455826.1e-1278.95Beta-galactosidase OS=Asparagus officinalis OX=4686 PE=2 SV=1[more]
Q9SCV47.9e-1273.68Beta-galactosidase 8 OS=Arabidopsis thaliana OX=3702 GN=BGAL8 PE=2 SV=2[more]
Q10NX86.7e-1158.49Beta-galactosidase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0255100 PE... [more]
P489811.1e-1060.38Beta-galactosidase OS=Malus domestica OX=3750 PE=1 SV=1[more]
Q9SCV94.4e-1075.00Beta-galactosidase 3 OS=Arabidopsis thaliana OX=3702 GN=BGAL3 PE=2 SV=1[more]
BLAST of MELO.jh033482.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6A2XR002.04e-1462.50Beta-galactosidase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111847pilonHSYRG... [more]
A0A6J1HIP24.11e-1469.81Beta-galactosidase OS=Cucurbita moschata OX=3662 GN=LOC111464792 PE=3 SV=1[more]
A0A0A0LUR15.60e-1469.81Beta-galactosidase OS=Cucumis sativus OX=3659 GN=Csa_1G085360 PE=3 SV=1[more]
A0A5A7UQ647.67e-1467.92Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G0... [more]
A0A5D3BCM57.67e-1467.92Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G0... [more]
BLAST of MELO.jh033482.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G28470.15.6e-1373.68beta-galactosidase 8 [more]
AT2G28470.25.6e-1373.68beta-galactosidase 8 [more]
AT4G36360.13.1e-1175.00beta-galactosidase 3 [more]
AT4G36360.23.1e-1175.00beta-galactosidase 3 [more]
AT3G13750.12.9e-0954.90beta galactosidase 1 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh033482.1.t1MELO.jh033482.1.t1mRNA