MELO.jh033171.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh033171.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr02: 19831341 .. 19831972 (-)
RNA-Seq ExpressionMELO.jh033171.1
SyntenyMELO.jh033171.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGAGTGTTCGCCACTCGTTGGAAGCATTGACCATCTTTTGGACCGTTTTGGGTCGCACATTAGTTCTCCCTCCAACAAGCTTGCTTCCCGACCTATACCTTGGGAAAACGTGTGAGGGAGCATGCCAAGAGTGTGGGTTGAAGTTCTTGGAGTATGAGTCCCGAAGATTGGAAGACTTATGACAAATACGAAGCAAAGGGAAGAAATCGTCGGGAGACTGCCTTTTACTCTAGGACGAGAAAACTGAGTCCGGGGCATTCGCGCTTTTGTTTTCTTGGGACGCACATCGGAGGTCCTCGAGCTCAGCCTATTTCCTTCGCTGGAACTGCATTTCCTGTGGTTTTGACACTGGACGAGCGTTTACCATTCATTGGAAACATTGGCCATCTTTTGAACCGTTTTGGGTCGTGCCTTATCTCTCCCACCAACGAGCTCGCTTCCCGACCTATACCTCCGGAAAACGTGTCAGGGAGCATGCCAGGAGTGTGGGTTGAAGTCCTCGGAGCACGAGACCCGAAGATCGAAAGACTTATGACCAATACGGAGCAAAGGGAAGAAACCGTCGGGGGACCGCCTTTTACCCCAGGACGAGAAAACTGAGTCCGGGGCATTCCCGCTCGCGTTTTCTTGG

mRNA sequence

ACGAGTGTTCGCCACTCGTTGGAAGCATTGACCATCTTTTGGACCGTTTTGGGTCGCACATTAGTTCTCCCTCCAACAAGCTTGCTTCCCGACCTATACCTTGGGAAAACGTGTGAGGGAGCATGCCAAGATCCTCGGAGCACGAGACCCGAAGATCGAAAGACTTATGACCAATACGGAGCAAAGGGAAGAAACCGTCGGGGGACCGCCTTTTACCCCAGGACGAGAAAACTGAGTCCGGGGCATTCCCGCTCGCGTTTTCTTGG

Coding sequence (CDS)

ATGACCAATACGGAGCAAAGGGAAGAAACCGTCGGGGGACCGCCTTTTACCCCAGGACGAGAAAACTGA

Protein sequence

MTNTEQREETVGGPPFTPGREN
Homology
[Close]
BLAST of MELO.jh033171.1 vs. NCBI nr
Match: MRQ44720.1 (hypothetical protein [Riemerella anatipestifer])

HSP 1 Score: 45.1 bits (105), Expect = 5.04e-05
Identity = 21/22 (95.45%), Postives = 21/22 (95.45%), Query Frame = 0 

Query: 1  MTNTEQREETVGGPPFTPGREN 22
          MTNTEQREETVGGP FTPGREN
Sbjct: 40 MTNTEQREETVGGPLFTPGREN 61

[Close]
BLAST of MELO.jh033171.1 vs. NCBI nr
Match: WP_206746731.1 (hypothetical protein, partial [Helicobacter pylori])

HSP 1 Score: 45.1 bits (105), Expect = 8.15e-05
Identity = 21/22 (95.45%), Postives = 21/22 (95.45%), Query Frame = 0 

Query: 1  MTNTEQREETVGGPPFTPGREN 22
          MTNTEQREETVGGP FTPGREN
Sbjct: 20 MTNTEQREETVGGPLFTPGREN 41

The following BLAST results are available for this feature:
BLAST of MELO.jh033171.1 vs. NCBI nr
Match NameE-valueIdentityDescription
MRQ44720.15.04e-0595.45hypothetical protein [Riemerella anatipestifer][more]
WP_206746731.18.15e-0595.45hypothetical protein, partial [Helicobacter pylori][more]
BLAST of MELO.jh033171.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh033171.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh033171.1 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh033171.1.t1MELO.jh033171.1.t1mRNA