MELO.jh031606.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh031606.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionProtein NRT1/ PTR FAMILY 5.2-like
Locationchr08: 12483268 .. 12483424 (+)
RNA-Seq ExpressionMELO.jh031606.1
SyntenyMELO.jh031606.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCACAAGTGGAGGGGAAAGGCTCGAAAAATGGAAGAGATGATTATACGGAAGATGGAACTGTGAGTCTCAAAGGTTTACCTGTCTTAAGATCAAAGACCGGGAGATGGAGAGCCTGTTACTTCATTGTTGGTAATTATAATCTTTAACGAACTT

mRNA sequence

ATGCCACAAGTGGAGGGGAAAGGCTCGAAAAATGGAAGAGATGATTATACGGAAGATGGAACTGTGAGTCTCAAAGGTTTACCTGTCTTAAGATCAAAGACCGGGAGATGGAGAGCCTGTTACTTCATTGTTGGTAATTATAATCTTTAACGAACTT

Coding sequence (CDS)

ATGCCACAAGTGGAGGGGAAAGGCTCGAAAAATGGAAGAGATGATTATACGGAAGATGGAACTGTGAGTCTCAAAGGTTTACCTGTCTTAAGATCAAAGACCGGGAGATGGAGAGCCTGTTACTTCATTGTTGGTAATTATAATCTTTAA

Protein sequence

MPQVEGKGSKNGRDDYTEDGTVSLKGLPVLRSKTGRWRACYFIVGNYNL
Homology
[Close]
BLAST of MELO.jh031606.1 vs. NCBI nr
Match: KAA0043221.1 (protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo var. makuwa] >TYK21343.1 protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo var. makuwa])

HSP 1 Score: 88.6 bits (218), Expect = 1.96e-21
Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 0 

Query: 1  MPQVEGKGSKNGRDDYTEDGTVSLKGLPVLRSKTGRWRACYFIVGNY 47
          M QVE KGSKNGRDDYTED TVS KGLPVLRSKTGRWRAC FIVG+Y
Sbjct: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIVGDY 47

[Close]
BLAST of MELO.jh031606.1 vs. NCBI nr
Match: KAA0037975.1 (protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo var. makuwa])

HSP 1 Score: 82.8 bits (203), Expect = 8.63e-17
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 0 

Query: 1  MPQVEGKGSKNGRDDYTEDGTVSLKGLPVLRSKTGRWRACYFIV 44
          M QVE KGS+NGRDDYTEDGTVSLKGLPVLRSKTG WRAC FIV
Sbjct: 1  MAQVEEKGSENGRDDYTEDGTVSLKGLPVLRSKTGGWRACSFIV 44

[Close]
BLAST of MELO.jh031606.1 vs. NCBI nr
Match: XP_008447390.2 (PREDICTED: LOW QUALITY PROTEIN: protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo])

HSP 1 Score: 82.8 bits (203), Expect = 8.63e-17
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 0 

Query: 1  MPQVEGKGSKNGRDDYTEDGTVSLKGLPVLRSKTGRWRACYFIV 44
          M QVE KGS+NGRDDYTEDGTVSLKGLPVLRSKTG WRAC FIV
Sbjct: 1  MAQVEEKGSENGRDDYTEDGTVSLKGLPVLRSKTGGWRACSFIV 44

[Close]
BLAST of MELO.jh031606.1 vs. NCBI nr
Match: XP_004152059.1 (protein NRT1/ PTR FAMILY 5.2 [Cucumis sativus] >KGN58287.1 hypothetical protein Csa_017448 [Cucumis sativus])

HSP 1 Score: 82.8 bits (203), Expect = 8.63e-17
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 0 

Query: 1  MPQVEGKGSKNGRDDYTEDGTVSLKGLPVLRSKTGRWRACYFIV 44
          M QV  KGS+NGRDDYTEDGTVSLKGLPVLRSKTGRWRAC FIV
Sbjct: 1  MAQVGEKGSENGRDDYTEDGTVSLKGLPVLRSKTGRWRACSFIV 44

[Close]
BLAST of MELO.jh031606.1 vs. NCBI nr
Match: PNX74482.1 (peptide transporter PTR3-a-like protein, partial [Trifolium pratense])

HSP 1 Score: 75.1 bits (183), Expect = 2.78e-16
Identity = 33/45 (73.33%), Postives = 38/45 (84.44%), Query Frame = 0 

Query: 1  MPQVEGKGSKNGRDDYTEDGTVSLKGLPVLRSKTGRWRACYFIVG 45
          M  VE KGS NG++DYT+DGTV LKG P+LRSKTGRW+AC FIVG
Sbjct: 1  MVMVEEKGSANGQEDYTQDGTVDLKGRPILRSKTGRWKACSFIVG 45

[Close]
BLAST of MELO.jh031606.1 vs. ExPASy Swiss-Prot
Match: Q8VZR7 (Protein NRT1/ PTR FAMILY 5.1 OS=Arabidopsis thaliana OX=3702 GN=NPF5.1 PE=2 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 3.5e-07
Identity = 22/30 (73.33%), Postives = 26/30 (86.67%), Query Frame = 0 

Query: 16 YTEDGTVSLKGLPVLRSKTGRWRACYFIVG 46
          YT+DGTV L+G PVL SKTGRWRAC F++G
Sbjct: 7  YTQDGTVDLQGRPVLASKTGRWRACSFLLG 36

[Close]
BLAST of MELO.jh031606.1 vs. ExPASy Swiss-Prot
Match: Q9FNL8 (Protein NRT1/ PTR FAMILY 5.3 OS=Arabidopsis thaliana OX=3702 GN=NPF5.3 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.9e-06
Identity = 21/31 (67.74%), Postives = 26/31 (83.87%), Query Frame = 0 

Query: 14 DDYTEDGTVSLKGLPVLRSKTGRWRACYFIV 45
          DDYT+DGTV L+G  V RS+TGRW+AC F+V
Sbjct: 8  DDYTKDGTVDLRGNRVRRSQTGRWKACSFVV 38

[Close]
BLAST of MELO.jh031606.1 vs. ExPASy Swiss-Prot
Match: Q9FNL7 (Protein NRT1/ PTR FAMILY 5.2 OS=Arabidopsis thaliana OX=3702 GN=NPF5.2 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 5.0e-06
Identity = 21/31 (67.74%), Postives = 25/31 (80.65%), Query Frame = 0 

Query: 14 DDYTEDGTVSLKGLPVLRSKTGRWRACYFIV 45
          DDYT+DGTV L+G PV RS  GRW+AC F+V
Sbjct: 8  DDYTKDGTVDLQGNPVRRSIRGRWKACSFVV 38

[Close]
BLAST of MELO.jh031606.1 vs. ExPASy Swiss-Prot
Match: P46032 (Protein NRT1/ PTR FAMILY 8.3 OS=Arabidopsis thaliana OX=3702 GN=NPF8.3 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 7.2e-05
Identity = 18/31 (58.06%), Postives = 22/31 (70.97%), Query Frame = 0 

Query: 16 YTEDGTVSLKGLPVLRSKTGRWRACYFIVGN 47
          Y EDG+V   G P L+ KTG W+AC FI+GN
Sbjct: 24 YAEDGSVDFNGNPPLKEKTGNWKACPFILGN 54

[Close]
BLAST of MELO.jh031606.1 vs. ExPASy Swiss-Prot
Match: Q9M390 (Protein NRT1/ PTR FAMILY 8.1 OS=Arabidopsis thaliana OX=3702 GN=NPF8.1 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 9.4e-05
Identity = 18/34 (52.94%), Postives = 24/34 (70.59%), Query Frame = 0 

Query: 13 RDDYTEDGTVSLKGLPVLRSKTGRWRACYFIVGN 47
          +D YT+DGTV +   P  + KTG W+AC FI+GN
Sbjct: 4  KDVYTQDGTVDIHKNPANKEKTGNWKACRFILGN 37

[Close]
BLAST of MELO.jh031606.1 vs. ExPASy TrEMBL
Match: A0A5D3DCP8 (Protein NRT1/ PTR FAMILY 5.2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1814G00110 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 9.51e-22
Identity = 41/47 (87.23%), Postives = 42/47 (89.36%), Query Frame = 0 

Query: 1  MPQVEGKGSKNGRDDYTEDGTVSLKGLPVLRSKTGRWRACYFIVGNY 47
          M QVE KGSKNGRDDYTED TVS KGLPVLRSKTGRWRAC FIVG+Y
Sbjct: 1  MAQVEEKGSKNGRDDYTEDATVSFKGLPVLRSKTGRWRACSFIVGDY 47

[Close]
BLAST of MELO.jh031606.1 vs. ExPASy TrEMBL
Match: A0A5A7T926 (Protein NRT1/ PTR FAMILY 5.2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001600 PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.18e-17
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 0 

Query: 1  MPQVEGKGSKNGRDDYTEDGTVSLKGLPVLRSKTGRWRACYFIV 44
          M QVE KGS+NGRDDYTEDGTVSLKGLPVLRSKTG WRAC FIV
Sbjct: 1  MAQVEEKGSENGRDDYTEDGTVSLKGLPVLRSKTGGWRACSFIV 44

[Close]
BLAST of MELO.jh031606.1 vs. ExPASy TrEMBL
Match: A0A0A0LC54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608170 PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.18e-17
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 0 

Query: 1  MPQVEGKGSKNGRDDYTEDGTVSLKGLPVLRSKTGRWRACYFIV 44
          M QV  KGS+NGRDDYTEDGTVSLKGLPVLRSKTGRWRAC FIV
Sbjct: 1  MAQVGEKGSENGRDDYTEDGTVSLKGLPVLRSKTGRWRACSFIV 44

[Close]
BLAST of MELO.jh031606.1 vs. ExPASy TrEMBL
Match: A0A1S3BHC2 (LOW QUALITY PROTEIN: protein NRT1/ PTR FAMILY 5.2-like OS=Cucumis melo OX=3656 GN=LOC103489849 PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.18e-17
Identity = 39/44 (88.64%), Postives = 40/44 (90.91%), Query Frame = 0 

Query: 1  MPQVEGKGSKNGRDDYTEDGTVSLKGLPVLRSKTGRWRACYFIV 44
          M QVE KGS+NGRDDYTEDGTVSLKGLPVLRSKTG WRAC FIV
Sbjct: 1  MAQVEEKGSENGRDDYTEDGTVSLKGLPVLRSKTGGWRACSFIV 44

[Close]
BLAST of MELO.jh031606.1 vs. ExPASy TrEMBL
Match: A0A2K3L7H5 (Peptide transporter PTR3-a-like protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g030402 PE=3 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.35e-16
Identity = 33/45 (73.33%), Postives = 38/45 (84.44%), Query Frame = 0 

Query: 1  MPQVEGKGSKNGRDDYTEDGTVSLKGLPVLRSKTGRWRACYFIVG 45
          M  VE KGS NG++DYT+DGTV LKG P+LRSKTGRW+AC FIVG
Sbjct: 1  MVMVEEKGSANGQEDYTQDGTVDLKGRPILRSKTGRWKACSFIVG 45

[Close]
BLAST of MELO.jh031606.1 vs. TAIR 10
Match: AT2G40460.1 (Major facilitator superfamily protein )

HSP 1 Score: 54.7 bits (130), Expect = 2.5e-08
Identity = 22/30 (73.33%), Postives = 26/30 (86.67%), Query Frame = 0 

Query: 16 YTEDGTVSLKGLPVLRSKTGRWRACYFIVG 46
          YT+DGTV L+G PVL SKTGRWRAC F++G
Sbjct: 7  YTQDGTVDLQGRPVLASKTGRWRACSFLLG 36

[Close]
BLAST of MELO.jh031606.1 vs. TAIR 10
Match: AT5G46040.1 (Major facilitator superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 2.1e-07
Identity = 21/31 (67.74%), Postives = 26/31 (83.87%), Query Frame = 0 

Query: 14 DDYTEDGTVSLKGLPVLRSKTGRWRACYFIV 45
          DDYT+DGTV L+G  V RS+TGRW+AC F+V
Sbjct: 8  DDYTKDGTVDLRGNRVRRSQTGRWKACSFVV 38

[Close]
BLAST of MELO.jh031606.1 vs. TAIR 10
Match: AT5G46050.1 (peptide transporter 3 )

HSP 1 Score: 50.8 bits (120), Expect = 3.5e-07
Identity = 21/31 (67.74%), Postives = 25/31 (80.65%), Query Frame = 0 

Query: 14 DDYTEDGTVSLKGLPVLRSKTGRWRACYFIV 45
          DDYT+DGTV L+G PV RS  GRW+AC F+V
Sbjct: 8  DDYTKDGTVDLQGNPVRRSIRGRWKACSFVV 38

[Close]
BLAST of MELO.jh031606.1 vs. TAIR 10
Match: AT2G02040.1 (peptide transporter 2 )

HSP 1 Score: 47.0 bits (110), Expect = 5.1e-06
Identity = 18/31 (58.06%), Postives = 22/31 (70.97%), Query Frame = 0 

Query: 16 YTEDGTVSLKGLPVLRSKTGRWRACYFIVGN 47
          Y EDG+V   G P L+ KTG W+AC FI+GN
Sbjct: 24 YAEDGSVDFNGNPPLKEKTGNWKACPFILGN 54

[Close]
BLAST of MELO.jh031606.1 vs. TAIR 10
Match: AT3G54140.1 (peptide transporter 1 )

HSP 1 Score: 46.6 bits (109), Expect = 6.7e-06
Identity = 18/34 (52.94%), Postives = 24/34 (70.59%), Query Frame = 0 

Query: 13 RDDYTEDGTVSLKGLPVLRSKTGRWRACYFIVGN 47
          +D YT+DGTV +   P  + KTG W+AC FI+GN
Sbjct: 4  KDVYTQDGTVDIHKNPANKEKTGNWKACRFILGN 37

The following BLAST results are available for this feature:
BLAST of MELO.jh031606.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0043221.11.96e-2187.23protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo var. makuwa] >TYK21343.1 protein... [more]
KAA0037975.18.63e-1788.64protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo var. makuwa][more]
XP_008447390.28.63e-1788.64PREDICTED: LOW QUALITY PROTEIN: protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo][more]
XP_004152059.18.63e-1788.64protein NRT1/ PTR FAMILY 5.2 [Cucumis sativus] >KGN58287.1 hypothetical protein ... [more]
PNX74482.12.78e-1673.33peptide transporter PTR3-a-like protein, partial [Trifolium pratense][more]
BLAST of MELO.jh031606.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8VZR73.5e-0773.33Protein NRT1/ PTR FAMILY 5.1 OS=Arabidopsis thaliana OX=3702 GN=NPF5.1 PE=2 SV=2[more]
Q9FNL82.9e-0667.74Protein NRT1/ PTR FAMILY 5.3 OS=Arabidopsis thaliana OX=3702 GN=NPF5.3 PE=2 SV=1[more]
Q9FNL75.0e-0667.74Protein NRT1/ PTR FAMILY 5.2 OS=Arabidopsis thaliana OX=3702 GN=NPF5.2 PE=2 SV=1[more]
P460327.2e-0558.06Protein NRT1/ PTR FAMILY 8.3 OS=Arabidopsis thaliana OX=3702 GN=NPF8.3 PE=1 SV=1[more]
Q9M3909.4e-0552.94Protein NRT1/ PTR FAMILY 8.1 OS=Arabidopsis thaliana OX=3702 GN=NPF8.1 PE=1 SV=1[more]
BLAST of MELO.jh031606.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DCP89.51e-2287.23Protein NRT1/ PTR FAMILY 5.2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7T9264.18e-1788.64Protein NRT1/ PTR FAMILY 5.2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A0A0LC544.18e-1788.64Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G608170 PE=3 SV=1[more]
A0A1S3BHC24.18e-1788.64LOW QUALITY PROTEIN: protein NRT1/ PTR FAMILY 5.2-like OS=Cucumis melo OX=3656 G... [more]
A0A2K3L7H51.35e-1673.33Peptide transporter PTR3-a-like protein (Fragment) OS=Trifolium pratense OX=5757... [more]
BLAST of MELO.jh031606.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G40460.12.5e-0873.33Major facilitator superfamily protein [more]
AT5G46040.12.1e-0767.74Major facilitator superfamily protein [more]
AT5G46050.13.5e-0767.74peptide transporter 3 [more]
AT2G02040.15.1e-0658.06peptide transporter 2 [more]
AT3G54140.16.7e-0652.94peptide transporter 1 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh031606.1.t1MELO.jh031606.1.t1mRNA