MELO.jh031409.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh031409.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionTSA1-like protein
Locationchr07: 16205417 .. 16205590 (+)
RNA-Seq ExpressionMELO.jh031409.1
SyntenyMELO.jh031409.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAAGGAGATTGAGAGCAAGAATAAAGAATATGAGTTGCTCCAAAATAAATACGAGTTTCTGAGGCTTGACAATCTTACTCACGATTCCATGGTTGGCTAGGACAAGATTGAGGTTAGTCGAGGAGTTGAAGGAGATGGAGAGTGAAATTCAACAACTCAAGGAATTGTA

mRNA sequence

ATGATGAAGGAGATTGAGAGCAAGAATAAAGAATATGAGTTGCTCCAAAATAAATACGAGTTTCTGAGGCTTGACAATCTTACTCACGATTCCATGGTTGGCTAGGACAAGATTGAGGTTAGTCGAGGAGTTGAAGGAGATGGAGAGTGAAATTCAACAACTCAAGGAATTGTA

Coding sequence (CDS)

ATGATGAAGGAGATTGAGAGCAAGAATAAAGAATATGAGTTGCTCCAAAATAAATACGAGTTTCTGAGGCTTGACAATCTTACTCACGATTCCATGGTTGGCTAG

Protein sequence

MMKEIESKNKEYELLQNKYEFLRLDNLTHDSMVG
Homology
BLAST of MELO.jh031409.1 vs. NCBI nr
Match: KAA0047373.1 (TSA1-like protein [Cucumis melo var. makuwa] >TYK14049.1 TSA1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 61.2 bits (147), Expect = 6.27e-11
Identity = 30/33 (90.91%), Postives = 32/33 (96.97%), Query Frame = 0

Query: 1  MMKEIESKNKEYELLQNKYEFLRLDNLTHDSMV 33
          M KEIESKNKEYELLQ+KYEFLRLD+LTHDSMV
Sbjct: 1  MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMV 33

BLAST of MELO.jh031409.1 vs. NCBI nr
Match: KAA0048522.1 (TSA1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 62.4 bits (150), Expect = 5.10e-10
Identity = 30/33 (90.91%), Postives = 32/33 (96.97%), Query Frame = 0

Query: 1  MMKEIESKNKEYELLQNKYEFLRLDNLTHDSMV 33
          M KEIESKNKEYE+LQ+KYEFLRLDNLTHDSMV
Sbjct: 1  MRKEIESKNKEYEILQSKYEFLRLDNLTHDSMV 33

BLAST of MELO.jh031409.1 vs. NCBI nr
Match: TYK28313.1 (TSA1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 62.4 bits (150), Expect = 5.10e-10
Identity = 30/33 (90.91%), Postives = 32/33 (96.97%), Query Frame = 0

Query: 1  MMKEIESKNKEYELLQNKYEFLRLDNLTHDSMV 33
          M KEIESKNKEYE+LQ+KYEFLRLDNLTHDSMV
Sbjct: 1  MRKEIESKNKEYEILQSKYEFLRLDNLTHDSMV 33

BLAST of MELO.jh031409.1 vs. NCBI nr
Match: KAE8649201.1 (hypothetical protein Csa_014777 [Cucumis sativus])

HSP 1 Score: 60.5 bits (145), Expect = 3.20e-09
Identity = 30/33 (90.91%), Postives = 31/33 (93.94%), Query Frame = 0

Query: 1  MMKEIESKNKEYELLQNKYEFLRLDNLTHDSMV 33
          M KEIESKNKEYELLQ+KYEFLRLDNLTH SMV
Sbjct: 58 MRKEIESKNKEYELLQSKYEFLRLDNLTHKSMV 90

BLAST of MELO.jh031409.1 vs. NCBI nr
Match: XP_031739615.1 (TSA1-like protein [Cucumis sativus])

HSP 1 Score: 60.5 bits (145), Expect = 3.20e-09
Identity = 30/33 (90.91%), Postives = 31/33 (93.94%), Query Frame = 0

Query: 1  MMKEIESKNKEYELLQNKYEFLRLDNLTHDSMV 33
          M KEIESKNKEYELLQ+KYEFLRLDNLTH SMV
Sbjct: 58 MRKEIESKNKEYELLQSKYEFLRLDNLTHKSMV 90

BLAST of MELO.jh031409.1 vs. ExPASy TrEMBL
Match: A0A5A7TUZ5 (TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00230 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.04e-11
Identity = 30/33 (90.91%), Postives = 32/33 (96.97%), Query Frame = 0

Query: 1  MMKEIESKNKEYELLQNKYEFLRLDNLTHDSMV 33
          M KEIESKNKEYELLQ+KYEFLRLD+LTHDSMV
Sbjct: 1  MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMV 33

BLAST of MELO.jh031409.1 vs. ExPASy TrEMBL
Match: A0A5D3DX93 (TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001380 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 2.47e-10
Identity = 30/33 (90.91%), Postives = 32/33 (96.97%), Query Frame = 0

Query: 1  MMKEIESKNKEYELLQNKYEFLRLDNLTHDSMV 33
          M KEIESKNKEYE+LQ+KYEFLRLDNLTHDSMV
Sbjct: 1  MRKEIESKNKEYEILQSKYEFLRLDNLTHDSMV 33

BLAST of MELO.jh031409.1 vs. ExPASy TrEMBL
Match: A0A5A7TYB0 (TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G001430 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 2.47e-10
Identity = 30/33 (90.91%), Postives = 32/33 (96.97%), Query Frame = 0

Query: 1  MMKEIESKNKEYELLQNKYEFLRLDNLTHDSMV 33
          M KEIESKNKEYE+LQ+KYEFLRLDNLTHDSMV
Sbjct: 1  MRKEIESKNKEYEILQSKYEFLRLDNLTHDSMV 33

BLAST of MELO.jh031409.1 vs. ExPASy TrEMBL
Match: A0A0A0KYB9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G051390 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.55e-09
Identity = 30/33 (90.91%), Postives = 31/33 (93.94%), Query Frame = 0

Query: 1  MMKEIESKNKEYELLQNKYEFLRLDNLTHDSMV 33
          M KEIESKNKEYELLQ+KYEFLRLDNLTH SMV
Sbjct: 52 MRKEIESKNKEYELLQSKYEFLRLDNLTHKSMV 84

BLAST of MELO.jh031409.1 vs. ExPASy TrEMBL
Match: A0A5A7UY16 (TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G00150 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.32e-09
Identity = 28/33 (84.85%), Postives = 29/33 (87.88%), Query Frame = 0

Query: 1  MMKEIESKNKEYELLQNKYEFLRLDNLTHDSMV 33
          M KEIESKNKEYE LQ+KYEFLRL NLTH SMV
Sbjct: 13 MRKEIESKNKEYEFLQSKYEFLRLKNLTHKSMV 45

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0047373.16.27e-1190.91TSA1-like protein [Cucumis melo var. makuwa] >TYK14049.1 TSA1-like protein [Cucu... [more]
KAA0048522.15.10e-1090.91TSA1-like protein [Cucumis melo var. makuwa][more]
TYK28313.15.10e-1090.91TSA1-like protein [Cucumis melo var. makuwa][more]
KAE8649201.13.20e-0990.91hypothetical protein Csa_014777 [Cucumis sativus][more]
XP_031739615.13.20e-0990.91TSA1-like protein [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TUZ53.04e-1190.91TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00... [more]
A0A5D3DX932.47e-1090.91TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00... [more]
A0A5A7TYB02.47e-1090.91TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G001... [more]
A0A0A0KYB91.55e-0990.91Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G051390 PE=4 SV=1[more]
A0A5A7UY165.32e-0984.85TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G0... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..25

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh031409.1.t1MELO.jh031409.1.t1mRNA