MELO.jh030941.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh030941.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionAcetyl-CoA carboxylase 1-like
Locationchr05: 9752998 .. 9753168 (+)
RNA-Seq ExpressionMELO.jh030941.1
SyntenyMELO.jh030941.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGGAAAGGGGAAGGCCTTTAATAACACTAGAGTGAAGAATAGAGTGAAGCGGTCGATTAAGGTGGCCGCGATTAGTAACAAGCTAGCAGATATGATGATGATTCACGGAGGAAATATGGCCAAAAGCCAATGAAGGGTTCTCCACACCCAAGGTATACAAATATGA

mRNA sequence

ATGGTAGGAAAGGGGAAGGCCTTTAATAACACTAGAGTGAAGAATAGAGTGAAGCGGTCGATTAAGGTGGCCGCGATTAGTAACAAGCTAGCAGATATGATGATGATTCACGGAGGAAATATGGCCAAAAGCCAATGAAGGGTTCTCCACACCCAAGGTATACAAATATGA

Coding sequence (CDS)

ATGGTAGGAAAGGGGAAGGCCTTTAATAACACTAGAGTGAAGAATAGAGTGAAGCGGTCGATTAAGGTGGCCGCGATTAGTAACAAGCTAGCAGATATGATGATGATTCACGGAGGAAATATGGCCAAAAGCCAATGA

Protein sequence

MVGKGKAFNNTRVKNRVKRSIKVAAISNKLADMMMIHGGNMAKSQ
Homology
BLAST of MELO.jh030941.1 vs. NCBI nr
Match: TYK26778.1 (heat stress transcription factor A-2d-like [Cucumis melo var. makuwa])

HSP 1 Score: 78.2 bits (191), Expect = 2.12e-15
Identity = 39/45 (86.67%), Postives = 42/45 (93.33%), Query Frame = 0

Query: 1   MVGKGKAFNNTRVKNRVKRSIKVAAISNKLADMMMIHGGNMAKSQ 45
           + GKGKAFNNTRVK+RVKRSIKV  ISNKLADMM+IHGGNMAKSQ
Sbjct: 302 ITGKGKAFNNTRVKHRVKRSIKVPTISNKLADMMIIHGGNMAKSQ 346

BLAST of MELO.jh030941.1 vs. NCBI nr
Match: KAA0051708.1 (acetyl-CoA carboxylase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 2.90e-15
Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = 0

Query: 1   MVGKGKAFNNTRVKNRVKRSIKVAAISNKLADMMMIHGGNMAKSQ 45
           + GKGKAFNNTRVK+RVK SIKV  ISNKLADMM+IHGGNMAKSQ
Sbjct: 118 VTGKGKAFNNTRVKHRVKWSIKVPTISNKLADMMIIHGGNMAKSQ 162

BLAST of MELO.jh030941.1 vs. NCBI nr
Match: KAA0042207.1 (triacylglycerol lipase 1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 2.71e-14
Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = 0

Query: 1   MVGKGKAFNNTRVKNRVKRSIKVAAISNKLADMMMIHGGNMAKSQ 45
           + GKGKAFNNTRVK+RVK SIKV  ISNKLADMM+IHGGNMAKSQ
Sbjct: 299 ITGKGKAFNNTRVKHRVKWSIKVPTISNKLADMMIIHGGNMAKSQ 343

BLAST of MELO.jh030941.1 vs. NCBI nr
Match: KAA0054890.1 (triacylglycerol lipase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 72.8 bits (177), Expect = 1.13e-13
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 0

Query: 1   MVGKGKAFNNTRVKNRVKRSIKVAAISNKLADMMMIHGGNMAKSQ 45
           + GKGKAFNNTRVK+RVKR IKV  ISNKL D+M+IHGGNMAKSQ
Sbjct: 224 ITGKGKAFNNTRVKHRVKRYIKVPTISNKLVDVMIIHGGNMAKSQ 268

BLAST of MELO.jh030941.1 vs. NCBI nr
Match: KAA0042275.1 (transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 72.4 bits (176), Expect = 1.62e-13
Identity = 36/45 (80.00%), Postives = 41/45 (91.11%), Query Frame = 0

Query: 1   MVGKGKAFNNTRVKNRVKRSIKVAAISNKLADMMMIHGGNMAKSQ 45
           ++ K KAFNNTRVK+RVKRSIKV  ISN+LADMM+IHGGNMAKSQ
Sbjct: 141 LIRKEKAFNNTRVKHRVKRSIKVPTISNRLADMMIIHGGNMAKSQ 185

BLAST of MELO.jh030941.1 vs. ExPASy TrEMBL
Match: A0A5D3DTC4 (Heat stress transcription factor A-2d-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G00780 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.03e-15
Identity = 39/45 (86.67%), Postives = 42/45 (93.33%), Query Frame = 0

Query: 1   MVGKGKAFNNTRVKNRVKRSIKVAAISNKLADMMMIHGGNMAKSQ 45
           + GKGKAFNNTRVK+RVKRSIKV  ISNKLADMM+IHGGNMAKSQ
Sbjct: 302 ITGKGKAFNNTRVKHRVKRSIKVPTISNKLADMMIIHGGNMAKSQ 346

BLAST of MELO.jh030941.1 vs. ExPASy TrEMBL
Match: A0A5A7U8V0 (Acetyl-CoA carboxylase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G00940 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.40e-15
Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = 0

Query: 1   MVGKGKAFNNTRVKNRVKRSIKVAAISNKLADMMMIHGGNMAKSQ 45
           + GKGKAFNNTRVK+RVK SIKV  ISNKLADMM+IHGGNMAKSQ
Sbjct: 118 VTGKGKAFNNTRVKHRVKWSIKVPTISNKLADMMIIHGGNMAKSQ 162

BLAST of MELO.jh030941.1 vs. ExPASy TrEMBL
Match: A0A5A7TKJ7 (Triacylglycerol lipase 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G007180 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.31e-14
Identity = 38/45 (84.44%), Postives = 41/45 (91.11%), Query Frame = 0

Query: 1   MVGKGKAFNNTRVKNRVKRSIKVAAISNKLADMMMIHGGNMAKSQ 45
           + GKGKAFNNTRVK+RVK SIKV  ISNKLADMM+IHGGNMAKSQ
Sbjct: 299 ITGKGKAFNNTRVKHRVKWSIKVPTISNKLADMMIIHGGNMAKSQ 343

BLAST of MELO.jh030941.1 vs. ExPASy TrEMBL
Match: A0A5A7UHW8 (Triacylglycerol lipase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G00080 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.46e-14
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 0

Query: 1   MVGKGKAFNNTRVKNRVKRSIKVAAISNKLADMMMIHGGNMAKSQ 45
           + GKGKAFNNTRVK+RVKR IKV  ISNKL D+M+IHGGNMAKSQ
Sbjct: 224 ITGKGKAFNNTRVKHRVKRYIKVPTISNKLVDVMIIHGGNMAKSQ 268

BLAST of MELO.jh030941.1 vs. ExPASy TrEMBL
Match: A0A5A7TLF6 (Transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00590 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.82e-14
Identity = 36/45 (80.00%), Postives = 41/45 (91.11%), Query Frame = 0

Query: 1   MVGKGKAFNNTRVKNRVKRSIKVAAISNKLADMMMIHGGNMAKSQ 45
           ++ K KAFNNTRVK+RVKRSIKV  ISN+LADMM+IHGGNMAKSQ
Sbjct: 141 LIRKEKAFNNTRVKHRVKRSIKVPTISNRLADMMIIHGGNMAKSQ 185

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK26778.12.12e-1586.67heat stress transcription factor A-2d-like [Cucumis melo var. makuwa][more]
KAA0051708.12.90e-1584.44acetyl-CoA carboxylase 1-like [Cucumis melo var. makuwa][more]
KAA0042207.12.71e-1484.44triacylglycerol lipase 1 isoform X2 [Cucumis melo var. makuwa][more]
KAA0054890.11.13e-1380.00triacylglycerol lipase 1-like [Cucumis melo var. makuwa][more]
KAA0042275.11.62e-1380.00transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 [Cucumis melo var. ma... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DTC41.03e-1586.67Heat stress transcription factor A-2d-like OS=Cucumis melo var. makuwa OX=119469... [more]
A0A5A7U8V01.40e-1584.44Acetyl-CoA carboxylase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A5A7TKJ71.31e-1484.44Triacylglycerol lipase 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A5A7UHW85.46e-1480.00Triacylglycerol lipase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A5A7TLF67.82e-1480.00Transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 OS=Cucumis melo var. ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018872Zn-cluster domainPFAMPF10533Plant_zn_clustcoord: 12..32
e-value: 3.6E-7
score: 30.1

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh030941.1.t1MELO.jh030941.1.t1mRNA