MELO.jh030344.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh030344.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionProtein MNN4-like
Locationchr02: 12707236 .. 12707390 (-)
RNA-Seq ExpressionMELO.jh030344.1
SyntenyMELO.jh030344.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAGAGCAAGGAAAAATGAAAAGAAAAGATGTTCAAGGATAACTGCGAAGAGGCCTCGAAAGAAATTGAGGAACTGAGTCCTTTGGAGGACGATGCCCCAAAGCCAAAGAAAAAGAGAAAAGTCACGATGAAGTAAAAGGCTTTGAGGGA

mRNA sequence

ATGAAGAAGAGCAAGGAAAAATGAAAAGAAAAGATGTTCAAGGATAACTGCGAAGAGGCCTCGAAAGAAATTGAGGAACTGAGTCCTTTGGAGGACGATGCCCCAAAGCCAAAGAAAAAGAGAAAAGTCACGATGAAGTAAAAGGCTTTGAGGGA

Coding sequence (CDS)

ATGTTCAAGGATAACTGCGAAGAGGCCTCGAAAGAAATTGAGGAACTGAGTCCTTTGGAGGACGATGCCCCAAAGCCAAAGAAAAAGAGAAAAGTCACGATGAAGTAA

Protein sequence

MFKDNCEEASKEIEELSPLEDDAPKPKKKRKVTMK
Homology
BLAST of MELO.jh030344.1 vs. NCBI nr
Match: KAA0053239.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 61.2 bits (147), Expect = 1.42e-09
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0

Query: 2  FKDNCEEASKEIEELSPLEDDAPKPKKKRKVTMK 35
          FKD C+EASKEIEELSPLEDDAPKPKKKRKV MK
Sbjct: 60 FKDYCKEASKEIEELSPLEDDAPKPKKKRKVAMK 93

BLAST of MELO.jh030344.1 vs. NCBI nr
Match: KAA0041719.1 (hypothetical protein E6C27_scaffold67G00550 [Cucumis melo var. makuwa])

HSP 1 Score: 48.1 bits (113), Expect = 1.54e-05
Identity = 25/33 (75.76%), Postives = 29/33 (87.88%), Query Frame = 0

Query: 3   KDNCEEASKEIEELSPLEDDAPKPKKKRKVTMK 35
           K+ C+EA KEIE+L  LE+DAPKPKKKRKVTMK
Sbjct: 70  KEFCKEALKEIEDLGHLENDAPKPKKKRKVTMK 102

BLAST of MELO.jh030344.1 vs. NCBI nr
Match: KAA0039027.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 47.8 bits (112), Expect = 1.03e-04
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 0

Query: 2  FKDNCEEASKEIEELSPLEDDAPKPKKKRKVTMK 35
          F++  EE  KEIE+LSPLED+ P PKKKRKVTMK
Sbjct: 30 FEEYYEEVEKEIEKLSPLEDEVPNPKKKRKVTMK 63

BLAST of MELO.jh030344.1 vs. NCBI nr
Match: TYJ99764.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 47.8 bits (112), Expect = 1.03e-04
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 0

Query: 2  FKDNCEEASKEIEELSPLEDDAPKPKKKRKVTMK 35
          F++  EE  KEIE+LSPLED+ P PKKKRKVTMK
Sbjct: 30 FEEYYEEVEKEIEKLSPLEDEVPNPKKKRKVTMK 63

BLAST of MELO.jh030344.1 vs. NCBI nr
Match: TYK15833.1 (protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 47.0 bits (110), Expect = 1.15e-04
Identity = 23/33 (69.70%), Postives = 28/33 (84.85%), Query Frame = 0

Query: 3   KDNCEEASKEIEELSPLEDDAPKPKKKRKVTMK 35
           +++CEE  KEIE L PLE +AP+PKKKRKVTMK
Sbjct: 69  EEHCEEFEKEIENLCPLEKEAPRPKKKRKVTMK 101

BLAST of MELO.jh030344.1 vs. ExPASy TrEMBL
Match: A0A5A7UID3 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00240 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 6.89e-10
Identity = 31/34 (91.18%), Postives = 32/34 (94.12%), Query Frame = 0

Query: 2  FKDNCEEASKEIEELSPLEDDAPKPKKKRKVTMK 35
          FKD C+EASKEIEELSPLEDDAPKPKKKRKV MK
Sbjct: 60 FKDYCKEASKEIEELSPLEDDAPKPKKKRKVAMK 93

BLAST of MELO.jh030344.1 vs. ExPASy TrEMBL
Match: A0A5A7TK20 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G00550 PE=4 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 7.47e-06
Identity = 25/33 (75.76%), Postives = 29/33 (87.88%), Query Frame = 0

Query: 3   KDNCEEASKEIEELSPLEDDAPKPKKKRKVTMK 35
           K+ C+EA KEIE+L  LE+DAPKPKKKRKVTMK
Sbjct: 70  KEFCKEALKEIEDLGHLENDAPKPKKKRKVTMK 102

BLAST of MELO.jh030344.1 vs. ExPASy TrEMBL
Match: A0A5A7TBR6 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G001140 PE=4 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 4.99e-05
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 0

Query: 2  FKDNCEEASKEIEELSPLEDDAPKPKKKRKVTMK 35
          F++  EE  KEIE+LSPLED+ P PKKKRKVTMK
Sbjct: 30 FEEYYEEVEKEIEKLSPLEDEVPNPKKKRKVTMK 63

BLAST of MELO.jh030344.1 vs. ExPASy TrEMBL
Match: A0A5D3BL64 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold252G00430 PE=4 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 4.99e-05
Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 0

Query: 2  FKDNCEEASKEIEELSPLEDDAPKPKKKRKVTMK 35
          F++  EE  KEIE+LSPLED+ P PKKKRKVTMK
Sbjct: 30 FEEYYEEVEKEIEKLSPLEDEVPNPKKKRKVTMK 63

BLAST of MELO.jh030344.1 vs. ExPASy TrEMBL
Match: A0A5D3CVF0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00030 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 5.59e-05
Identity = 23/33 (69.70%), Postives = 28/33 (84.85%), Query Frame = 0

Query: 3   KDNCEEASKEIEELSPLEDDAPKPKKKRKVTMK 35
           +++CEE  KEIE L PLE +AP+PKKKRKVTMK
Sbjct: 69  EEHCEEFEKEIENLCPLEKEAPRPKKKRKVTMK 101

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0053239.11.42e-0991.18protein MNN4-like [Cucumis melo var. makuwa][more]
KAA0041719.11.54e-0575.76hypothetical protein E6C27_scaffold67G00550 [Cucumis melo var. makuwa][more]
KAA0039027.11.03e-0470.59protein MNN4-like [Cucumis melo var. makuwa][more]
TYJ99764.11.03e-0470.59protein MNN4-like [Cucumis melo var. makuwa][more]
TYK15833.11.15e-0469.70protein MNN4-like [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7UID36.89e-1091.18Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00... [more]
A0A5A7TK207.47e-0675.76Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7TBR64.99e-0570.59Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G001... [more]
A0A5D3BL644.99e-0570.59Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold252G00... [more]
A0A5D3CVF05.59e-0569.70Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold637G00... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh030344.1.t1MELO.jh030344.1.t1mRNA