MELO.jh024042.1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidestart_codon Hold the cursor over a type above to highlight its positions in the sequence below.GTTATAACCTTGGATATGGGCCTTCTTGTAACTGGCACAAAATATCGTGGGGAGTTTGAAGAAAGATTAAAGAAACTGATGGAGGAAATAAAAAAAAGTGATGAAATAATTCTATTTATTGATGAGGTGCATACATTAATTGGAGCAGGGGCTGCAGAAGGAGCTATTGATGCAGCAAACATATTAAAACCTGCCCTTGCAAGGGGTGAACTGCAG GTTATAACCTTGGATATGGGCCTTCTTGTAACTGGCACAAAATATCGTGGGGAGTTTGAAGAAAGATTAAAGAAACTGATGGAGGAAATAAAAAAAAGTGATGAAATAATTCTATTTATTGATGAGGTGCATACATTAATTGGAGCAGGGGCTGCAGAAGGAGCTATTGATGCAGCAAACATATTAAAACCTGCCCTTGCAAGGGGTGAACTGCAG ATGGGCCTTCTTGTAACTGGCACAAAATATCGTGGGGAGTTTGAAGAAAGATTAAAGAAACTGATGGAGGAAATAAAAAAAAGTGATGAAATAATTCTATTTATTGATGAGGTGCATACATTAATTGGAGCAGGGGCTGCAGAAGGAGCTATTGATGCAGCAAACATATTAAAACCTGCCCTTGCAAGGGGTGAACTGCAG MGLLVTGTKYRGEFEERLKKLMEEIKKSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQ Homology
BLAST of MELO.jh024042.1 vs. NCBI nr
Match: KAA0066397.1 (chaperone protein ClpC [Cucumis melo var. makuwa] >TYK00888.1 chaperone protein ClpC [Cucumis melo var. makuwa]) HSP 1 Score: 129 bits (325), Expect = 9.32e-37 Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of MELO.jh024042.1 vs. NCBI nr
Match: VVW59200.1 (unnamed protein product, partial [Nymphaea colorata]) HSP 1 Score: 126 bits (316), Expect = 7.69e-36 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of MELO.jh024042.1 vs. NCBI nr
Match: KAA0061986.1 (ATP-dependent Clp protease ATP-binding subunit clpA-like protein CD4B [Cucumis melo var. makuwa]) HSP 1 Score: 126 bits (316), Expect = 9.76e-36 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of MELO.jh024042.1 vs. NCBI nr
Match: MCI09382.1 (chaperone protein ClpC chloroplastic-like [Trifolium medium]) HSP 1 Score: 126 bits (316), Expect = 2.25e-35 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of MELO.jh024042.1 vs. NCBI nr
Match: VAH31937.1 (unnamed protein product [Triticum turgidum subsp. durum]) HSP 1 Score: 124 bits (310), Expect = 6.91e-35 Identity = 63/67 (94.03%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of MELO.jh024042.1 vs. ExPASy Swiss-Prot
Match: P31541 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CD4A PE=3 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 1.7e-28 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of MELO.jh024042.1 vs. ExPASy Swiss-Prot
Match: P31542 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CD4B PE=3 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 1.7e-28 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of MELO.jh024042.1 vs. ExPASy Swiss-Prot
Match: Q2QVG9 (Chaperone protein ClpC2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CLPC2 PE=2 SV=2) HSP 1 Score: 125.9 bits (315), Expect = 1.7e-28 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of MELO.jh024042.1 vs. ExPASy Swiss-Prot
Match: Q9FI56 (Chaperone protein ClpC1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPC1 PE=1 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 3.7e-28 Identity = 64/67 (95.52%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of MELO.jh024042.1 vs. ExPASy Swiss-Prot
Match: Q9SXJ7 (Chaperone protein ClpC2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPC2 PE=1 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 3.7e-28 Identity = 64/67 (95.52%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of MELO.jh024042.1 vs. ExPASy TrEMBL
Match: A0A5A7VH27 (Chaperone protein ClpC OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00470 PE=4 SV=1) HSP 1 Score: 129 bits (325), Expect = 4.51e-37 Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of MELO.jh024042.1 vs. ExPASy TrEMBL
Match: A0A5K1AZE0 (ATPase_AAA_core domain-containing protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS13145 PE=4 SV=1) HSP 1 Score: 126 bits (316), Expect = 1.51e-36 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of MELO.jh024042.1 vs. ExPASy TrEMBL
Match: A0A5K1F945 (ATPase_AAA_core domain-containing protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS23346 PE=4 SV=1) HSP 1 Score: 126 bits (316), Expect = 3.72e-36 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of MELO.jh024042.1 vs. ExPASy TrEMBL
Match: A0A5A7V664 (ATP-dependent Clp protease ATP-binding subunit clpA-like protein CD4B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G002890 PE=4 SV=1) HSP 1 Score: 126 bits (316), Expect = 4.73e-36 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of MELO.jh024042.1 vs. ExPASy TrEMBL
Match: A0A392PCA2 (Chaperone protein ClpC chloroplastic-like (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1) HSP 1 Score: 126 bits (316), Expect = 1.09e-35 Identity = 65/67 (97.01%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of MELO.jh024042.1 vs. TAIR 10
Match: AT3G48870.1 (Clp ATPase ) HSP 1 Score: 124.8 bits (312), Expect = 2.6e-29 Identity = 64/67 (95.52%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of MELO.jh024042.1 vs. TAIR 10
Match: AT3G48870.2 (Clp ATPase ) HSP 1 Score: 124.8 bits (312), Expect = 2.6e-29 Identity = 64/67 (95.52%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of MELO.jh024042.1 vs. TAIR 10
Match: AT5G50920.1 (CLPC homologue 1 ) HSP 1 Score: 124.8 bits (312), Expect = 2.6e-29 Identity = 64/67 (95.52%), Postives = 66/67 (98.51%), Query Frame = 0
BLAST of MELO.jh024042.1 vs. TAIR 10
Match: AT5G15450.1 (casein lytic proteinase B3 ) HSP 1 Score: 89.7 bits (221), Expect = 9.4e-19 Identity = 42/68 (61.76%), Postives = 56/68 (82.35%), Query Frame = 0
BLAST of MELO.jh024042.1 vs. TAIR 10
Match: AT1G74310.1 (heat shock protein 101 ) HSP 1 Score: 87.0 bits (214), Expect = 6.1e-18 Identity = 40/68 (58.82%), Postives = 57/68 (83.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|