MELO.jh023660.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh023660.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr11: 3244361 .. 3245955 (+)
RNA-Seq ExpressionMELO.jh023660.1
SyntenyMELO.jh023660.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TTACTTCAGGGTTTTGAAAACTTTCTCAAAAGCTCCAATGTAGAAGACATCATCATGGCCGAAATCATACAATTTCCTCACGATTCCTATTCTCTTTCCTTTCAGCCCTTCAGCCCTTAGAAATTGGCCATATCCACCTCTTGGAATGTATTTTGATGCTTCAATTGTTGAATTATCATATCTGTCCGCTCCTGCAATGGCATCTAGAACATAAGCAGCATCTGCTACTGTTCTACAAATAGGCCTGTTCCATCATTAGTCAATCAGCAGAAAATACTTCCTTTGGATACTTAATAGAAACAGTTCAATAGAAACAAATTGATTACCCAACAGTGTCCTGCCTCAAAGAGATCGGAACGACCCCTGCCCGACTTGTGAGACCTACTGTGGGTTTGATGCCAACTACTGAGTTGAGAGTAGAAGGGCATAATATTGATCCATCAGTTTCGGTTCCCAGTGAAACTGTAACCATATTTGCTGCAACGGATATGGCAGAGCCGCTACTTGAGCCACACGGTTCTCCCATTGTGTAAGGATTCTGCAAACATATCCTCTGCTCTTAGTCTATTGTTGATTTAACTCTAATGTTTGATGTCTTTTAATTAGACTTTCTAATTGACTGATTTTTTTTTTAAAAGATAGCTTAGAGGCTGATATTAACAATATATTTTTAGTTAAAAACTTAGAAGGATTGTTTATTGGCCGAATCTGAGTAGTTCTACACTTTCAAAATCTTCTTTAGTTATCCTATTATTTGAAATATATTTTGAGATGTGACGTCCTACTGTGTGGTACAGATTCATTATTGTGTGATTTCACTTAGAAGCGGACAATTATTGAAGAAGTTGGAAAAGTTACACACCTTCCCTTGGCCACCCCTAGCGCTCCAACCATTGGGCGGTTCATAGGACCTGAAATCGGACCACTCACTTAGGCTCGCTTTCCCAAAGATAATTGCACCTGCCTTCCTCAACTTAGTCACCACACCTGCATCACGAGGAACAATAGAGCCAAGCAGAGCAAAGGAGCCAGCCGTTGTGTTGAGCTTATCCTTGGTTGCAATGTTATCTTTTACAAGTACAGGGATGCCATGAAGTGGAGACAAAGATCTCAGTGAGCTTCTCTTGCGCTTGAGATCGGCTTGAGAGGCTTGGTTTAAAGCATCTGGATTCACTTCTATGATCCCTTTCAGGATGGGGTTTAATCTACGCACTTGTTCGAGGTAAAACTCAACGAGTTGCCTCGAGGTGAGTTTGTTTTGGTAGAAAGCAAGTTGGAAGTCTTTCAAAGTTGCTTCTTCAATGGAAAAGTTGGTGTCAAAGCTACAACTCCCACTCCCATATAATGATAAAATCGCCAACAAACCCAGAAGCATGGATATGTAAATGGGAAAGCTTTGGGTAGCCATGGGAGCTTAGTTCATGAATCTGTTTTTTTTTATCAGTCAACGATCAAGTGGAGTATGCTCCACTCCTTAGTGGAAATATCTTTTTGAGAATCAAGAATACTTTAATGCTTAGACTCTTTTGTTTTTTTTTTTTTTTAATGGAGATTGAAACTTTTAACTTGGAGTTGAATGTATGTTTTAATAAGAA

mRNA sequence

TTACTTCAGGGTTTTGAAAACTTTCTCAAAAGCTCCAATGTAGAAGACATCATCATGGCCGAAATCATACAATTTCCTCACGATTCCTATTCTCTTTCCTTTCAGCCCTTCAGCCCTTAGAAATTGGCCATATCCACCTCTTGGAATGTATTTTGATGCTTCAATTGTTGAATTATCATATCTGTCCGCTCCTGCAATGGCATCTAGAACATAAGCAGCATCTGCTACTGTTCTACAAATAGGCCTGTTCCATCATTAGTCAATCAGCAGAAAATACTTCCTTTGGATACTTAATAGAAACAGTTCAATAGAAACAAATTGATTACCCAACAGTGTCCTGCCTCAAAGAGATCGGAACGACCCCTGCCCGACTTGTGAGACCTACTGTGGGTTTGATGCCAACTACTGAGTTGAGAGTAGAAGGGCATAATATTGATCCATCAGTTTCGGTTCCCAGTGAAACTGTAACCATATTTGCTGCAACGGATATGGCAGAGCCGCTACTTGAGCCACACGGTTCTCCCATTGTATTCATTATTGTGTGATTTCACTTAGAAGCGGACAATTATTGAAGAAGTTGGAAAAGTTACACACCTTCCCTTGGCCACCCCTAGCGCTCCAACCATTGGGCGGTTCATAGGACCTGAAATCGGACCACTCACTTAGGCTCGCTTTCCCAAAGATAATTGCACCTGCCTTCCTCAACTTAGTCACCACACCTGCATCACGAGGAACAATAGAGCCAAGCAGAGCAAAGGAGCCAGCCGTTGTGTTGAGCTTATCCTTGGTTGCAATGTTATCTTTTACAAGTACAGGGATGCCATGAAGTGGAGACAAAGATCTCAGTGAGCTTCTCTTGCGCTTGAGATCGGCTTGAGAGGCTTGGTTTAAAGCATCTGGATTCACTTCTATGATCCCTTTCAGGATGGGGTTTAATCTACGCACTTGTTCGAGGTAAAACTCAACGAGTTGCCTCGAGGTGAGTTTGTTTTGGTAGAAAGCAAGTTGGAAGTCTTTCAAAGTTGCTTCTTCAATGGAAAAGTTGGTGTCAAAGCTACAACTCCCACTCCCATATAATGATAAAATCGCCAACAAACCCAGAAGCATGGATATGTAAATGGGAAAGCTTTGGGTAGCCATGGGAGCTTAGTTCATGAATCTGTTTTTTTTTATCAGTCAACGATCAAGTGGAGTATGCTCCACTCCTTAGTGGAAATATCTTTTTGAGAATCAAGAATACTTTAATGCTTAGACTCTTTTGTTTTTTTTTTTTTTTAATGGAGATTGAAACTTTTAACTTGGAGTTGAATGTATGTTTTAATAAGAA

Coding sequence (CDS)

ATGCCAACTACTGAGTTGAGAGTAGAAGGGCATAATATTGATCCATCAGTTTCGGTTCCCAGTGAAACTGTAACCATATTTGCTGCAACGGATATGGCAGAGCCGCTACTTGAGCCACACGGTTCTCCCATTGTATTCATTATTGTGTGA

Protein sequence

MPTTELRVEGHNIDPSVSVPSETVTIFAATDMAEPLLEPHGSPIVFIIV
Homology
[Close]
BLAST of MELO.jh023660.1 vs. NCBI nr
Match: MCI18393.1 (hypothetical protein [Trifolium medium])

HSP 1 Score: 74.7 bits (182), Expect = 4.99e-16
Identity = 34/46 (73.91%), Postives = 42/46 (91.30%), Query Frame = 0 

Query: 1  MPTTELRVEGHNIDPSVSVPSETVTIFAATDMAEPLLEPHGSPIVF 46
          MPTTEL++EGH ++PSVSVPS+TVT FAATD+A+PLLEPHG P V+
Sbjct: 26 MPTTELKLEGHKMEPSVSVPSDTVTKFAATDIADPLLEPHGLPNVY 71

[Close]
BLAST of MELO.jh023660.1 vs. NCBI nr
Match: KAF7837068.1 (Uncharacterized protein G2W53_005550 [Senna tora])

HSP 1 Score: 67.8 bits (164), Expect = 5.75e-12
Identity = 32/45 (71.11%), Postives = 38/45 (84.44%), Query Frame = 0 

Query: 1   MPTTELRVEGHNIDPSVSVPSETVTIFAATDMAEPLLEPHGSPIV 45
           MPT EL+ EGH ++PSVSVP E VTIFAATD+A+PLL+P G PIV
Sbjct: 91  MPTKELKWEGHKMEPSVSVPREIVTIFAATDIADPLLDPQGVPIV 135

[Close]
BLAST of MELO.jh023660.1 vs. NCBI nr
Match: KAG5578352.1 (hypothetical protein H5410_058486 [Solanum commersonii])

HSP 1 Score: 59.7 bits (143), Expect = 4.90e-10
Identity = 25/42 (59.52%), Postives = 36/42 (85.71%), Query Frame = 0 

Query: 1  MPTTELRVEGHNIDPSVSVPSETVTIFAATDMAEPLLEPHGS 42
          +PTTEL ++G  ++P+VSVP+ T  +FAATD+AEP+L+PHGS
Sbjct: 40 IPTTELALDGDRMEPAVSVPNATAAMFAATDVAEPVLDPHGS 81

[Close]
BLAST of MELO.jh023660.1 vs. NCBI nr
Match: KAB8094894.1 (hypothetical protein EE612_022333, partial [Oryza sativa] >BAS87983.1 Os04g0183401, partial [Oryza sativa Japonica Group])

HSP 1 Score: 53.5 bits (127), Expect = 1.46e-06
Identity = 26/42 (61.90%), Postives = 30/42 (71.43%), Query Frame = 0 

Query: 1  MPTTELRVEGHNIDPSVSVPSETVTIFAATDMAEPLLEPHGS 42
          +PTTE    G +IDPSVSVPS T  +FAA   A PLL+PHGS
Sbjct: 36 IPTTEFSDAGQSIDPSVSVPSVTAAMFAAAATAGPLLDPHGS 77

[Close]
BLAST of MELO.jh023660.1 vs. NCBI nr
Match: KAG5584482.1 (hypothetical protein H5410_044916 [Solanum commersonii])

HSP 1 Score: 52.8 bits (125), Expect = 1.94e-06
Identity = 22/42 (52.38%), Postives = 34/42 (80.95%), Query Frame = 0 

Query: 1   MPTTELRVEGHNIDPSVSVPSETVTIFAATDMAEPLLEPHGS 42
           +PTTEL ++G  ++P+VSVP+ T  +FAA D+A+P+L+P GS
Sbjct: 160 IPTTELALDGDGMEPAVSVPNATAAMFAAIDVADPVLDPDGS 201

[Close]
BLAST of MELO.jh023660.1 vs. ExPASy TrEMBL
Match: A0A392Q1W0 (Uncharacterized protein (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.42e-16
Identity = 34/46 (73.91%), Postives = 42/46 (91.30%), Query Frame = 0 

Query: 1  MPTTELRVEGHNIDPSVSVPSETVTIFAATDMAEPLLEPHGSPIVF 46
          MPTTEL++EGH ++PSVSVPS+TVT FAATD+A+PLLEPHG P V+
Sbjct: 26 MPTTELKLEGHKMEPSVSVPSDTVTKFAATDIADPLLEPHGLPNVY 71

[Close]
BLAST of MELO.jh023660.1 vs. ExPASy TrEMBL
Match: A0A5K1H2I8 (Uncharacterized protein OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS28320 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.51e-08
Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 1  MPTTELRVEGHNIDPSVSVPSETVTIFAATDMAEPLLEPHGSPI 44
          +PTTEL + G  + PSVSVPS+T   FAAT +A+P+LEPHGS +
Sbjct: 13 IPTTELALAGQMMLPSVSVPSDTGAKFAATPVADPVLEPHGSAV 56

[Close]
BLAST of MELO.jh023660.1 vs. ExPASy TrEMBL
Match: J3LVT1 (Uncharacterized protein OS=Oryza brachyantha OX=4533 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.24e-07
Identity = 26/42 (61.90%), Postives = 31/42 (73.81%), Query Frame = 0 

Query: 1  MPTTELRVEGHNIDPSVSVPSETVTIFAATDMAEPLLEPHGS 42
          +PTTE    G +IDPSVSVPS T  +FAA   A+PLL+PHGS
Sbjct: 23 IPTTEFFDAGQSIDPSVSVPSVTAAMFAAAASADPLLDPHGS 64

[Close]
BLAST of MELO.jh023660.1 vs. ExPASy TrEMBL
Match: A0A0P0W6Y7 (Os04g0183401 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0183401 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 7.07e-07
Identity = 26/42 (61.90%), Postives = 30/42 (71.43%), Query Frame = 0 

Query: 1  MPTTELRVEGHNIDPSVSVPSETVTIFAATDMAEPLLEPHGS 42
          +PTTE    G +IDPSVSVPS T  +FAA   A PLL+PHGS
Sbjct: 36 IPTTEFSDAGQSIDPSVSVPSVTAAMFAAAATAGPLLDPHGS 77

[Close]
BLAST of MELO.jh023660.1 vs. ExPASy TrEMBL
Match: M8BH00 (Uncharacterized protein OS=Aegilops tauschii OX=37682 GN=F775_42978 PE=4 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.08e-06
Identity = 23/42 (54.76%), Postives = 31/42 (73.81%), Query Frame = 0 

Query: 1  MPTTELRVEGHNIDPSVSVPSETVTIFAATDMAEPLLEPHGS 42
          +PTTE    G +++PS+ VPS T T+FAA  +AEP L+PHGS
Sbjct: 16 IPTTEFSDAGQSMEPSLFVPSVTATMFAAAAIAEPPLDPHGS 57

The following BLAST results are available for this feature:
BLAST of MELO.jh023660.1 vs. NCBI nr
Match NameE-valueIdentityDescription
MCI18393.14.99e-1673.91hypothetical protein [Trifolium medium][more]
KAF7837068.15.75e-1271.11Uncharacterized protein G2W53_005550 [Senna tora][more]
KAG5578352.14.90e-1059.52hypothetical protein H5410_058486 [Solanum commersonii][more]
KAB8094894.11.46e-0661.90hypothetical protein EE612_022333, partial [Oryza sativa] >BAS87983.1 Os04g01834... [more]
KAG5584482.11.94e-0652.38hypothetical protein H5410_044916 [Solanum commersonii][more]
BLAST of MELO.jh023660.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh023660.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A392Q1W02.42e-1673.91Uncharacterized protein (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1[more]
A0A5K1H2I82.51e-0859.09Uncharacterized protein OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS28320 PE=4 SV... [more]
J3LVT11.24e-0761.90Uncharacterized protein OS=Oryza brachyantha OX=4533 PE=4 SV=1[more]
A0A0P0W6Y77.07e-0761.90Os04g0183401 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os04... [more]
M8BH001.08e-0654.76Uncharacterized protein OS=Aegilops tauschii OX=37682 GN=F775_42978 PE=4 SV=1[more]
BLAST of MELO.jh023660.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh023660.1.t1MELO.jh023660.1.t1mRNA