MELO.jh022648.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh022648.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionProtein kinase family protein
Locationchr10: 10884540 .. 10885094 (+)
RNA-Seq ExpressionMELO.jh022648.1
SyntenyMELO.jh022648.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAAAGGTTCGTCTGCTTCAATTTTGTAAATATGAGATCTATTGTGCTTTGGTGATGGATAATTTTGCTCTTTCCTGTCTCCTGTACTTCGTACTCTGTTCGATGATAAAGACCTTGTTATCTTGGTTTTCTTACACAATTAAGAAATGATTTTATTCTTATATTTCCTGCCTCTATCTCTATTGGGCCCAACAAAACAATAGGTAAATAAGATTAAGAGAATAAATTAAACTACAAGGCGTGGGCATTTTATTTTGTGCAAAATCTCAATGTAAATTTAAGTCTATTGGATTTGATTTCAAGATGCTACCATTCTGCTTCTTCAAGGACACAATATACCCAAAAATCATACAAAGTGAGTGATTCTTTCCCCTTCAAGTGGATAAGCAAAAAATGGAGAGAAGGGTTTCATGTGACCTCAATGACAACTGCAGGAAGCTGATGGGGTGTTGTCATGTGATGCAATGCTGGTTTTAGTGACCAAGTTGAGTTTTGTTTATGTTTTTAGTATCCGCAGTCAATTAAATATGTTAATATTATTATTCTTGTGA

mRNA sequence

ATGTCAAAAGGTTCGTCTGCTTCAATTTTGACACAATATACCCAAAAATCATACAAAGTGAGTGATTCTTTCCCCTTCAAGTGGATAAGCAAAAAATGGAGAGAAGGGTTTCATGTGACCTCAATGACAACTGCAGGAAGCTGATGGGGTGTTGTCATGTGATGCAATGCTGGTTTTAGTGACCAAGTTGAGTTTTGTTTATGTTTTTAGTATCCGCAGTCAATTAAATATGTTAATATTATTATTCTTGTGA

Coding sequence (CDS)

ATGTCAAAAGGTTCGTCTGCTTCAATTTTGACACAATATACCCAAAAATCATACAAAGTGAGTGATTCTTTCCCCTTCAAGTGGATAAGCAAAAAATGGAGAGAAGGGTTTCATGTGACCTCAATGACAACTGCAGGAAGCTGA

Protein sequence

MSKGSSASILTQYTQKSYKVSDSFPFKWISKKWREGFHVTSMTTAGS
Homology
BLAST of MELO.jh022648.1 vs. NCBI nr
Match: PNX87956.1 (casein kinase i isoform alpha, partial [Trifolium pratense])

HSP 1 Score: 75.9 bits (185), Expect = 1.60e-16
Identity = 37/50 (74.00%), Postives = 43/50 (86.00%), Query Frame = 0

Query: 1  MSKGSSASIL---TQYTQKSYKVSDSFPFKWISKKWREGFHVTSMTTAGS 47
          ++ GSS  +L   TQYTQ+SYKVS+SFPFKWI+KKWREGFHVTSM TAGS
Sbjct: 16 VTNGSSLVVLSKGTQYTQQSYKVSESFPFKWINKKWREGFHVTSMATAGS 65

BLAST of MELO.jh022648.1 vs. NCBI nr
Match: MCH94420.1 (serine/threonine-protein kinase VRK1-like [Trifolium medium])

HSP 1 Score: 75.1 bits (183), Expect = 4.31e-16
Identity = 33/37 (89.19%), Postives = 36/37 (97.30%), Query Frame = 0

Query: 11 TQYTQKSYKVSDSFPFKWISKKWREGFHVTSMTTAGS 47
          TQYTQ+SYKVS+SFPFKWI+KKWREGFHVTSM TAGS
Sbjct: 1  TQYTQQSYKVSESFPFKWINKKWREGFHVTSMATAGS 37

BLAST of MELO.jh022648.1 vs. NCBI nr
Match: KAG7948083.1 (hypothetical protein I3843_14G129300 [Carya illinoinensis] >KAG7948084.1 hypothetical protein I3843_14G129300 [Carya illinoinensis])

HSP 1 Score: 77.4 bits (189), Expect = 5.12e-16
Identity = 38/47 (80.85%), Postives = 40/47 (85.11%), Query Frame = 0

Query: 1  MSKGSSASILTQYTQKSYKVSDSFPFKWISKKWREGFHVTSMTTAGS 47
          MSKG      TQYTQ+SYKVSDSFPFKWI+KKWREGFHVTSM TAGS
Sbjct: 49 MSKG------TQYTQQSYKVSDSFPFKWINKKWREGFHVTSMATAGS 89

BLAST of MELO.jh022648.1 vs. NCBI nr
Match: KAG6679480.1 (hypothetical protein I3842_14G133100 [Carya illinoinensis])

HSP 1 Score: 77.4 bits (189), Expect = 1.07e-15
Identity = 38/47 (80.85%), Postives = 40/47 (85.11%), Query Frame = 0

Query: 1   MSKGSSASILTQYTQKSYKVSDSFPFKWISKKWREGFHVTSMTTAGS 47
           MSKG      TQYTQ+SYKVSDSFPFKWI+KKWREGFHVTSM TAGS
Sbjct: 89  MSKG------TQYTQQSYKVSDSFPFKWINKKWREGFHVTSMATAGS 129

BLAST of MELO.jh022648.1 vs. NCBI nr
Match: KAG6679481.1 (hypothetical protein I3842_14G133100 [Carya illinoinensis] >KAG7948127.1 hypothetical protein I3843_14G131500 [Carya illinoinensis])

HSP 1 Score: 77.4 bits (189), Expect = 1.09e-15
Identity = 38/47 (80.85%), Postives = 40/47 (85.11%), Query Frame = 0

Query: 1   MSKGSSASILTQYTQKSYKVSDSFPFKWISKKWREGFHVTSMTTAGS 47
           MSKG      TQYTQ+SYKVSDSFPFKWI+KKWREGFHVTSM TAGS
Sbjct: 90  MSKG------TQYTQQSYKVSDSFPFKWINKKWREGFHVTSMATAGS 130

BLAST of MELO.jh022648.1 vs. ExPASy Swiss-Prot
Match: Q852L0 (Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD16 PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 1.3e-11
Identity = 32/49 (65.31%), Postives = 41/49 (83.67%), Query Frame = 0

Query: 2   SKGSSASIL---TQYTQKSYKVSDSFPFKWISKKWREGFHVTSMTTAGS 48
           + GSS  ++   T YTQ+SYKVS+SFP+KWI+KKW+EGFHVTSM TAG+
Sbjct: 562 TNGSSLVVMSKGTPYTQQSYKVSESFPYKWINKKWKEGFHVTSMATAGN 610

BLAST of MELO.jh022648.1 vs. ExPASy TrEMBL
Match: A0A2K3MAZ5 (Casein kinase i isoform alpha (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g044056 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 7.74e-17
Identity = 37/50 (74.00%), Postives = 43/50 (86.00%), Query Frame = 0

Query: 1  MSKGSSASIL---TQYTQKSYKVSDSFPFKWISKKWREGFHVTSMTTAGS 47
          ++ GSS  +L   TQYTQ+SYKVS+SFPFKWI+KKWREGFHVTSM TAGS
Sbjct: 16 VTNGSSLVVLSKGTQYTQQSYKVSESFPFKWINKKWREGFHVTSMATAGS 65

BLAST of MELO.jh022648.1 vs. ExPASy TrEMBL
Match: A0A5K0WNX6 (Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS5407 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.10e-16
Identity = 33/37 (89.19%), Postives = 35/37 (94.59%), Query Frame = 0

Query: 11 TQYTQKSYKVSDSFPFKWISKKWREGFHVTSMTTAGS 47
          T YTQ+SYKVSDSFPFKWI+KKWREGFHVTSM TAGS
Sbjct: 1  TMYTQQSYKVSDSFPFKWINKKWREGFHVTSMATAGS 37

BLAST of MELO.jh022648.1 vs. ExPASy TrEMBL
Match: A0A392N3M6 (Serine/threonine-protein kinase VRK1-like (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0015380 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 2.08e-16
Identity = 33/37 (89.19%), Postives = 36/37 (97.30%), Query Frame = 0

Query: 11 TQYTQKSYKVSDSFPFKWISKKWREGFHVTSMTTAGS 47
          TQYTQ+SYKVS+SFPFKWI+KKWREGFHVTSM TAGS
Sbjct: 1  TQYTQQSYKVSESFPFKWINKKWREGFHVTSMATAGS 37

BLAST of MELO.jh022648.1 vs. ExPASy TrEMBL
Match: A0A1J3E084 (Uncharacterized protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=GA_TR3432_c29_g1_i1_g.10960 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.21e-15
Identity = 33/37 (89.19%), Postives = 36/37 (97.30%), Query Frame = 0

Query: 11 TQYTQKSYKVSDSFPFKWISKKWREGFHVTSMTTAGS 47
          T YTQ+SYKVSDSFPFKWI+KKW+EGFHVTSMTTAGS
Sbjct: 30 TPYTQQSYKVSDSFPFKWINKKWKEGFHVTSMTTAGS 66

BLAST of MELO.jh022648.1 vs. ExPASy TrEMBL
Match: A0A5K0W046 (Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS1635 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.29e-15
Identity = 32/37 (86.49%), Postives = 35/37 (94.59%), Query Frame = 0

Query: 11 TQYTQKSYKVSDSFPFKWISKKWREGFHVTSMTTAGS 47
          T YTQ+SYKVSDSFPFKWISKKW+EGF VTSMTTAG+
Sbjct: 1  TSYTQQSYKVSDSFPFKWISKKWKEGFFVTSMTTAGN 37

BLAST of MELO.jh022648.1 vs. TAIR 10
Match: AT3G13670.1 (Protein kinase family protein )

HSP 1 Score: 76.6 bits (187), Expect = 5.8e-15
Identity = 37/49 (75.51%), Postives = 42/49 (85.71%), Query Frame = 0

Query: 2   SKGSSASIL---TQYTQKSYKVSDSFPFKWISKKWREGFHVTSMTTAGS 48
           S GSS  ++   TQYTQ+SYKVSDSFPFKWI+KKWREGFHVTSM TAG+
Sbjct: 558 SNGSSLVVMSKGTQYTQQSYKVSDSFPFKWINKKWREGFHVTSMATAGN 606

BLAST of MELO.jh022648.1 vs. TAIR 10
Match: AT3G03940.1 (Protein kinase family protein )

HSP 1 Score: 75.1 bits (183), Expect = 1.7e-14
Identity = 36/49 (73.47%), Postives = 42/49 (85.71%), Query Frame = 0

Query: 2   SKGSSASIL---TQYTQKSYKVSDSFPFKWISKKWREGFHVTSMTTAGS 48
           + GSS  ++   T YTQ+SYKVSDSFPFKWI+KKW+EGFHVTSMTTAGS
Sbjct: 556 NNGSSLVVMAKGTPYTQQSYKVSDSFPFKWINKKWKEGFHVTSMTTAGS 604

BLAST of MELO.jh022648.1 vs. TAIR 10
Match: AT2G25760.1 (Protein kinase family protein )

HSP 1 Score: 72.8 bits (177), Expect = 8.3e-14
Identity = 36/47 (76.60%), Postives = 39/47 (82.98%), Query Frame = 0

Query: 1   MSKGSSASILTQYTQKSYKVSDSFPFKWISKKWREGFHVTSMTTAGS 48
           MSKG      TQY Q+SYKVSDSFPFKWI+KKWREGF+VTSM TAGS
Sbjct: 536 MSKG------TQYLQQSYKVSDSFPFKWINKKWREGFYVTSMATAGS 576

BLAST of MELO.jh022648.1 vs. TAIR 10
Match: AT2G25760.2 (Protein kinase family protein )

HSP 1 Score: 72.8 bits (177), Expect = 8.3e-14
Identity = 36/47 (76.60%), Postives = 39/47 (82.98%), Query Frame = 0

Query: 1   MSKGSSASILTQYTQKSYKVSDSFPFKWISKKWREGFHVTSMTTAGS 48
           MSKG      TQY Q+SYKVSDSFPFKWI+KKWREGF+VTSM TAGS
Sbjct: 539 MSKG------TQYLQQSYKVSDSFPFKWINKKWREGFYVTSMATAGS 579

BLAST of MELO.jh022648.1 vs. TAIR 10
Match: AT5G18190.1 (Protein kinase family protein )

HSP 1 Score: 72.4 bits (176), Expect = 1.1e-13
Identity = 35/47 (74.47%), Postives = 39/47 (82.98%), Query Frame = 0

Query: 1   MSKGSSASILTQYTQKSYKVSDSFPFKWISKKWREGFHVTSMTTAGS 48
           MSKG      T YTQ+SYKVSDSFPFKWI+KKW+E FHVTSMTTAG+
Sbjct: 554 MSKG------TSYTQQSYKVSDSFPFKWINKKWKEDFHVTSMTTAGN 594

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PNX87956.11.60e-1674.00casein kinase i isoform alpha, partial [Trifolium pratense][more]
MCH94420.14.31e-1689.19serine/threonine-protein kinase VRK1-like [Trifolium medium][more]
KAG7948083.15.12e-1680.85hypothetical protein I3843_14G129300 [Carya illinoinensis] >KAG7948084.1 hypothe... [more]
KAG6679480.11.07e-1580.85hypothetical protein I3842_14G133100 [Carya illinoinensis][more]
KAG6679481.11.09e-1580.85hypothetical protein I3842_14G133100 [Carya illinoinensis] >KAG7948127.1 hypothe... [more]
Match NameE-valueIdentityDescription
Q852L01.3e-1165.31Casein kinase 1-like protein HD16 OS=Oryza sativa subsp. japonica OX=39947 GN=HD... [more]
Match NameE-valueIdentityDescription
A0A2K3MAZ57.74e-1774.00Casein kinase i isoform alpha (Fragment) OS=Trifolium pratense OX=57577 GN=L195_... [more]
A0A5K0WNX61.10e-1689.19Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS54... [more]
A0A392N3M62.08e-1689.19Serine/threonine-protein kinase VRK1-like (Fragment) OS=Trifolium medium OX=9702... [more]
A0A1J3E0841.21e-1589.19Uncharacterized protein (Fragment) OS=Noccaea caerulescens OX=107243 GN=GA_TR343... [more]
A0A5K0W0461.29e-1586.49Uncharacterized protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS16... [more]
Match NameE-valueIdentityDescription
AT3G13670.15.8e-1575.51Protein kinase family protein [more]
AT3G03940.11.7e-1473.47Protein kinase family protein [more]
AT2G25760.18.3e-1476.60Protein kinase family protein [more]
AT2G25760.28.3e-1476.60Protein kinase family protein [more]
AT5G18190.11.1e-1374.47Protein kinase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11909:SF369CASEIN KINASE I-LIKE PROTEINcoord: 4..47
NoneNo IPR availablePANTHERPTHR11909CASEIN KINASE-RELATEDcoord: 4..47

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh022648.1.t1MELO.jh022648.1.t1mRNA