MELO.jh022071.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh022071.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr10: 3548560 .. 3552160 (-)
RNA-Seq ExpressionMELO.jh022071.1
SyntenyMELO.jh022071.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAGCGCAGTGTCGGTTTGCTCAACATTTTTAGCCATTTTCACTACGCCGAAAGTGCTGACTTCCGCCACCGCATCGGTGCAGGAAACGTAGAAAGATAGAGCTCCGGAAAGCATCACTCGAAGACTTGGCAGGTCCTTAATCTGCAAATACTCCAAACTTTTCTGCAGGTTGTCAAGGGCGGAATCGTAGTTCTGTGTGCAAGCGTCTATAGCCTGCTTATTGCCGAGTATCGAACTCGCTGTTTTAGCGCGTTTTGTTTCGAACGAGAGATGTTGAATGGCGGTTTTAATCGCGACCGTGGGATCGGAAGCGCCTTTCACCACGGATCGGCAGAGAGGTACGTATTCGGCTTGTGCGCAGATGTCGACTCCCTGAGCTTGGCCGGCGAATAAGACAACGACGGCTGTGGCGACGACGAGAAAGACCGGTGAGAAAGAAACCGATTGCTTTTTAGCCATATTTTGTAATTTAATTAATATCTTTGTTCTTTTTTGTTAGGCTTCTTTCTCAAGGTCGGTTAAAATTAGGGCAAATGAAGAATGATGAACAGGTAAAAGGGATGGTTTTGTGAATTTGTCGGTGGGTTGGTTTTTATATGATATTTCAATGACACGGCCGTAACGGTATTCCGTAACTGCCCAATAAGAACGGGTTGTTTTGTAAGGCTTTCCTTTATTTTAGTGAGTCTATTGAATTTGAATATTTTTTTTAGGTTTTAATTAACCTATTGCTTTATAAACTTTTGAAAAACTATTTTCCTTTTAATTATCTCGATATATTTTTAGAAAAACTTTTTAGTAGATGATTTGAATACTTGTCCTTTGTACAATTGAATTGAGTTTATATTAGCAAAAGAATTATTATTTTTAAATATAATAAAAATGAATAAAAATATTTATAAATTTATAGATACTAAAAGACTATTATCATCTAAATTTTTTAAAACTAACAAAATATTGAAACTATTTATAAAATATAACATGTTTTAAAATGATAGTCTTCTTAAATTCGAGTTCTTTTCAATTTAGTTCTTAAGGTTTAAGTTTCACATTTTTAGCTTTGTTTTTTTACTAAATATTCTCATTTTTTTCATAATTATTTTTCATTAGAAAAATTTATTAAATTTCACTAAATTCTAATTTAGACTATTTTTCATTGCTATCAAAATTAAAATTAAAGTTTTGCTTCATAATTATTTTAAATTGGATTTTTTTCTAAAATCTATTTGTCCTCCATAGAAAAAAATAAATGAAAAAAATGCATTATACTTCATATTCATATAAATATTTTGTTTGTTTTTCTATTTTTTTTTTTTTTGACAATTTTCTTTAAATTAAAGTAATAGACATCGACAATTAAATTGAAAGCAAGTTTTTATAGTAAAATCAAGCTTAAACTGTAAAATTTAAAATCCATATGTGAAATTTAGAAGAAAAAAAATTGTATATGCCTAAAATTGTTACAATGATGTTTTTAGATACTCATTCTTCTAAATTTCTTCTTTTTTTTCTTTTTTTCTTTTTTCTTTTTTTTTTTTTTGTCATCTCATGCAATTTTTTATTATTTATAGAGTAAAATTTGTTTATATGGCATACACTATTCAATTATACAAATATAAAATTAATGTTCGGAAGTTTATATTAAGATTGAAATACCATGTTCATAAATAAACTAAAGTTTTTTCTTAAAAGAATGTAACTGTGATTTTACTTTTTCTTTTTTTTTTTTTTGTCAAAACTCTTATTGAAGTAAAAATATACATTTGGCCTATGAATAAGCTCATACCTAAAAAAAGATGGACATAAAAGGACATGAAATACCATATCCAAAAAAATGACAGAATCTTGGGATTATAAAATACACTCTCAGATCAATAATTAATTAGCCAAAAACTTTAAAGTGATGTTTGATTAAATTATATTATCATTCCACATCTATATAGAAAAAAAAAAAAACAAATTCCAAACTTTCATCTCCCATCCTTGACGCCTAAAACATTTTTGGCACCTCTACATTTTTATGAGAAGAATAAGTAATCTCCGAAGAATACGTGACCTTCTTTTATCTTTTTATTTTTATGTTTAGCTAGAGAACAAAATTTGAACACCAACGAAAAAAATTTGAACACCAACAAACATAAAACATAAAAAAGAAAAACCACTTGTTTATCGAATCACGGTTTGTTGTTCATGTTTTTAAAAATGAAAATCATGCAATAAAAAAAAGTCCAACATAATCAATCACAAAACCCTTTTTTTTAATTGTTAGAGGTAATTTTTTATCCTTTTTATTTTTATTTTTTTCTCTTTGGATATACTATTTTAATTTCTTAAATACAAAACTTTTGCTTAAAAAGCAATTGCAGTTTACAACGAATGCATAGTGCTAAAAGAAGAATGCACCCTTAACCATAATTAGATTGTAATTAAGCTTCAAATTAATTAAGCATCTAAGGACTTTGACTTTGGTTTCAATTTCTATCACCCACTTATTTCCTTAAGTTATGGATATTTCCATTATAAAATGTTAATTTACTTATTTATATTAACTTTTATAGATTTTTATCAACAACATATTAAATTTTGGTTAAAATAATGAAAATATATCCATTGACCAATCCATATGTTTTAGTACATCAAACATGAAAGTATAGTCATGTTCGCATATGCCTTGTAGTCACGCATATGTTATACATGAAAAAGATATAATTTGTGTACTTTCGATTTAGTTGTCGCCGTTTCATATTATTTTACTACTACAAAACGACATATCGGTTCGGTCGAACCTCCCTGCCCGTTCCTCTTCCTATTAGTTTTCACTTCAACAAACTGGCTAAGTACAAGCAATTTGCGGCTAATTGTTCCAGCAGATTGTCGGTGTTCAAAACTCGGGAAGCTTTCTTCTGCTCGCCACTCTCTATCACCGCATCGTCACATGTGGAGTAGTCAGTCATTGCGGCGGAGAGGTTGATTTTCAGGCTCGCAATGTCTTTTTTCTGCATATACGCCAGACTGGTCTCCAGGTCGTCAATGGCATCGTCGAAGTTCTGTTTGCACACGACCAGAGACTTCAATGAACCGATCCTCAAGCTTGAAACTTTCGCGCGTCTCGTTTCGAAAATGAGGTGTTTGATGGCGTTCTTCAAGGCTGATGTTGGATCGGAGGCGCCTTTCAAGGTGGATCGACAGAGTGCAGGGAAAGCAGCTTTGTCGCAGAGGGATGATCCATGAGCTTGGCCGATGAAGACGGCGGCGAAGAGAAAGACCATTGAGAAAGAAACCAAATGATTTTCACCCATTGTTAGATTAATCTAACTATGAATTGCTTTGGTTTGTTTTTTGTTTTTGGTTTCTTTCTCAATGGGGAACGGGCAGGGGGTTGGTTTTGTGAACATGGGGTGTTTGGTTTTTATACACTTCAATGGCAATTGCATGATTTTGTAACCGTTTCCAATAAGAAGGGTAGTTCTATTTTGGTGGAAGAACTTACGAGGCTTTCCTTGATTGTAGAGTGACCATTGGTAAATAACATATTAGGCTTCTAAGTTCTAACATTTTATCTTTTATTTGCCTGGAATAAAAGGTCAATTTTAGTGTTGA

mRNA sequence

GCAGCGCAGTGTCGGTTTGCTCAACATTTTTAGCCATTTTCACTACGCCGAAAGTGCTGACTTCCGCCACCGCATCGGTGCAGGAAACGTAGAAAGATAGAGCTCCGGAAAGCATCACTCGAAGACTTGGCAGGTCCTTAATCTGCAAATACTCCAAACTTTTCTGCAGGTTGTCAAGGGCGGAATCGTAGTTCTGTGTGCAAGCGTCTATAGCCTGCTTATTGCCGAGTATCGAACTCGCTGTTTTAGCGCGTTTTGTTTCGAACGAGAGATGTTGAATGGCGGTTTTAATCGCGACCGTGGGATCGGAAGCGCCTTTCACCACGGATCGGCAGAGAGGTACGTATTCGGCTTGTGCGCAGATGTCGACTCCCTGAGCTTGGCCGGCGAATAAGACAACGACGGCTGTGGCGACGACGAGAAAGACCGGCTTCTTTCTCAAGGTCGGTTAAAATTAGGGCAAATGAAGAATGATGAACAGATTGTCGGTGTTCAAAACTCGGGAAGCTTTCTTCTGCTCGCCACTCTCTATCACCGCATCGTCACATGTGGAGTAGTCAGTCATTGCGGCGGAGAGGTTGATTTTCAGGCTCGCAATGTCTTTTTTCTGCATATACGCCAGACTGGTCTCCAGGTCGTCAATGGCATCGTCGAAGTTCTGTTTGCACACGACCAGAGACTTCAATGAACCGATCCTCAAGCTTGAAACTTTCGCGCGTCTCGTTTCGAAAATGAGGTGTTTGATGGCGTTCTTCAAGGCTGATGTTGGATCGGAGGCGCCTTTCAAGGTGGATCGACAGAGTGCAGGGAAAGCAGCTTTGTCGCAGAGGGATGATCCATGAGCTTGGCCGATGAAGACGGCGGCGAAGAGAAAGACCATTGAGAAAGAAACCAAATGATTTTCACCCATTGTTAGATTAATCTAACTATGAATTGCTTTGGTTTGTTTTTTGTTTTTGGTTTCTTTCTCAATGGGGAACGGGCAGGGGGTTGGTTTTGTGAACATGGGGTGTTTGGTTTTTATACACTTCAATGGCAATTGCATGATTTTGTAACCGTTTCCAATAAGAAGGGTAGTTCTATTTTGGTGGAAGAACTTACGAGGCTTTCCTTGATTGTAGAGTGACCATTGGTAAATAACATATTAGGCTTCTAAGTTCTAACATTTTATCTTTTATTTGCCTGGAATAAAAGGTCAATTTTAGTGTTGA

Coding sequence (CDS)

ATGTCTTTTTTCTGCATATACGCCAGACTGGTCTCCAGGTCGTCAATGGCATCGTCGAAGTTCTGTTTGCACACGACCAGAGACTTCAATGAACCGATCCTCAAGCTTGAAACTTTCGCGCGTCTCGTTTCGAAAATGAGGTGTTTGATGGCGTTCTTCAAGGCTGATGTTGGATCGGAGGCGCCTTTCAAGGTGGATCGACAGAGTGCAGGGAAAGCAGCTTTGTCGCAGAGGGATGATCCATGA

Protein sequence

MSFFCIYARLVSRSSMASSKFCLHTTRDFNEPILKLETFARLVSKMRCLMAFFKADVGSEAPFKVDRQSAGKAALSQRDDP
Homology
[Close]
BLAST of MELO.jh022071.1 vs. ExPASy TrEMBL
Match: A0A0A0KVK0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G599850 PE=4 SV=1)

HSP 1 Score: 133 bits (335), Expect = 2.44e-38
Identity = 66/81 (81.48%), Postives = 70/81 (86.42%), Query Frame = 0 

Query: 1  MSFFCIYARLVSRSSMASSKFCLHTTRDFNEPILKLETFARLVSKMRCLMAFFKADVGSE 60
          MSFFCIYARL+ RSS ASSKFCLHT RDFN+PI KLE+FAR VSKMRC M  FKADVGS+
Sbjct: 1  MSFFCIYARLLCRSSTASSKFCLHTPRDFNDPIFKLESFARFVSKMRCSMVIFKADVGSD 60

Query: 61 APFKVDRQSAGKAALSQRDDP 81
          APF VDRQSAGKAA SQR DP
Sbjct: 61 APFTVDRQSAGKAASSQRADP 81

The following BLAST results are available for this feature:
BLAST of MELO.jh022071.1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO.jh022071.1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO.jh022071.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVK02.44e-3881.48Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G599850 PE=4 SV=1[more]
BLAST of MELO.jh022071.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh022071.1.t1MELO.jh022071.1.t1mRNA