MELO.jh018047.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh018047.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr08: 8195496 .. 8196257 (-)
RNA-Seq ExpressionMELO.jh018047.1
SyntenyMELO.jh018047.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TTATCTGTTTCTTACAGCCCCCATGTCTACTTCCTCTTCTAGGGTTCGTTTTTCATTGTTGTATTTTTATTCTGCATCTGTTTTTTTTGGTTCATTTCCATGTCTAATTTATTTGCGCAGCCCTTAAGATCGCCTTCCTCTGTGTGAAATGGAAGCGTCTCGAGTCATAGCTGCGCTACAGCGAATACTCTTTTCGGAGAATTCCACCAGGGTTTTCCTTTTGGAATTCTCTTCGTTTCCCACTTGATCTCGATCTCGAGGCATTTGTAATCCGCCTTTGGATCTCCTACTGGTTGTCTGAAACTCCAACGATTTGGCTTTTCTGCTCATTCGTTAGTTTATTTTCAGACAAGTTGAGTTTCAGATCCTTATGGATGTTGTCTATGCCTCACTCTACGGTGGGTTACATTTCGTATTCGCTTTTTGCGATATTTGTATTTCGTTTTGTTCTTGTTCACGTTGCTTTCTTTTTCACGCGCTCGACAATATGGATATTAATTCATGGCAAGGATGATGATTCAATTAGATGTGTGAAAGGATTATTCCTTTCTGAACTTAACTTTTTGAGGCATTTTCAATTGTCTGACTTGCTCGAGTTTTATCTTTTCTCATAGTTCGTTACTCTTGTCTGGAACTACCGTAGCGTGTCTTCTTTTTTCCAACTAGTCTTGGGAAAACCATACGTAATTATCACAATTGCTACTGTTTATATAATGTAAATCATATCAGCATGCTATTCATCTTAGGGATTATTTTTGCTCA

mRNA sequence

TTATCTGTTTCTTACAGCCCCCATGTCTACTTCCTCTTCTAGGGTTCGTTTTTCATTGTTGTATTTTTATTCTGCATCTGTTTTTTTTGGTTCATTTCCATGTCTAATTTATTTGCGCAGCCCTTAAGATCGCCTTCCTCTGTGTGAAATGGAAGCGTCTCGAGTCATAGCTGCGCTACAGCGAATACTCTTTTCGGAGAATTCCACCAGGGTTTTCCTTTTGGAATTCTCTTCGTTTCCCACTTGATCTCGATCTCGAGGCATTTGTAATCCGCCTTTGGATCTCCTACTGGTTGTCTGAAACTCCAACGATTTGGCTTTTCTGCTCATTCGTTAGTTTATTTTCAGACAAGTTGAGTTTCAGATCCTTATGGATGTTGTCTATGCCTCACTCTACGGTGGGTTACATTTCGTATTCGCTTTTTGCGATATTTGTATTTCGTTTTGTTCTTGTTCACGTTGCTTTCTTTTTCACGCGCTCGACAATATGGATATTAATTCATGGCAAGGATGATGATTCAATTAGATGTGTGAAAGGATTATTCCTTTCTGAACTTAACTTTTTGAGGCATTTTCAATTGTCTGACTTGCTCGAGTTTTATCTTTTCTCATAGTTCGTTACTCTTGTCTGGAACTACCGTAGCGTGTCTTCTTTTTTCCAACTAGTCTTGGGAAAACCATACGTAATTATCACAATTGCTACTGTTTATATAATGTAAATCATATCAGCATGCTATTCATCTTAGGGATTATTTTTGCTCA

Coding sequence (CDS)

ATGTTGTCTATGCCTCACTCTACGGTGGGTTACATTTCGTATTCGCTTTTTGCGATATTTGTATTTCGTTTTGTTCTTGTTCACGTTGCTTTCTTTTTCACGCGCTCGACAATATGGATATTAATTCATGGCAAGGATGATGATTCAATTAGATGTGTGAAAGGATTATTCCTTTCTGAACTTAACTTTTTGAGGCATTTTCAATTGTCTGACTTGCTCGAGTTTTATCTTTTCTCATAG

Protein sequence

MLSMPHSTVGYISYSLFAIFVFRFVLVHVAFFFTRSTIWILIHGKDDDSIRCVKGLFLSELNFLRHFQLSDLLEFYLFS
Homology
[Close]
BLAST of MELO.jh018047.1 vs. NCBI nr
Match: KGN48275.1 (hypothetical protein Csa_004336 [Cucumis sativus])

HSP 1 Score: 120 bits (302), Expect = 1.89e-33
Identity = 61/79 (77.22%), Postives = 68/79 (86.08%), Query Frame = 0 

Query: 1   MLSMPHSTVGYISYSLFAIFVFRFVLVHVAFFFTRSTIWILIHGKDDDSIRCVKGLFLSE 60
           MLSMP+S++GYISYS+F +FVF FV VHV FF+ R TIWIL HGK DDSIRCVKGL LSE
Sbjct: 28  MLSMPYSSMGYISYSIFVMFVFDFVFVHVLFFYKRLTIWILTHGKGDDSIRCVKGLILSE 87

Query: 61  LNFLRHFQLSDLLEFYLFS 79
           LNFLRHF LSDL EFYLF+
Sbjct: 88  LNFLRHFHLSDLPEFYLFT 106

[Close]
BLAST of MELO.jh018047.1 vs. ExPASy TrEMBL
Match: A0A0A0KEY9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452760 PE=4 SV=1)

HSP 1 Score: 120 bits (302), Expect = 9.13e-34
Identity = 61/79 (77.22%), Postives = 68/79 (86.08%), Query Frame = 0 

Query: 1   MLSMPHSTVGYISYSLFAIFVFRFVLVHVAFFFTRSTIWILIHGKDDDSIRCVKGLFLSE 60
           MLSMP+S++GYISYS+F +FVF FV VHV FF+ R TIWIL HGK DDSIRCVKGL LSE
Sbjct: 28  MLSMPYSSMGYISYSIFVMFVFDFVFVHVLFFYKRLTIWILTHGKGDDSIRCVKGLILSE 87

Query: 61  LNFLRHFQLSDLLEFYLFS 79
           LNFLRHF LSDL EFYLF+
Sbjct: 88  LNFLRHFHLSDLPEFYLFT 106

The following BLAST results are available for this feature:
BLAST of MELO.jh018047.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN48275.11.89e-3377.22hypothetical protein Csa_004336 [Cucumis sativus][more]
BLAST of MELO.jh018047.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh018047.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KEY99.13e-3477.22Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452760 PE=4 SV=1[more]
BLAST of MELO.jh018047.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh018047.1.t1MELO.jh018047.1.t1mRNA