MELO.jh011740.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh011740.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Transposon Tf2-1 polyprotein isoform X1
Location	chr05: 29669784 .. 29671321 (-)
RNA-Seq Expression	MELO.jh011740.1
Synteny	MELO.jh011740.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAAGTCTTGTGTTAATTCTTGAAAGATAGAATAACCGAGAGAGAGAGGATTACTACTTGTAATTGAGATTTGATATCAATAAAGTGTAATTGAATACTAGTGGAGTTCCATCAAATTGGTATCAGAGCAGTTCAATCCTGGACAAGAAAAGAAAAATGGCAAAGAAAGCCGAAGAGAGATTTGAAGTCATTGAGCAAGAGATTATCAACATCCAAACCGAGTTACAAAGAATACCGATACTTGAAGCGAAAATCACGAAACACTTAGAGAAGATAGATTCTCAGAATGAACAAATTCAACATCAGCAACAATTAATCTTGAAGTATATCGAAGGAATGATGAAAGAACGATCAATAACACACGAATCGGATGGATCATCAAGCAAAATGAAAACAAAAATGGCAGAACTAATCGATGAAGTGAACGGAAATGAAAAAGATGGTGAAGAGAAAAACAATGATCGAAGTAAGTTCAAAAAAATCGAGATGCCAGTGTTTAATGGTGAAGATCCAGATGCGTGGCTATTTCGTGCAGATCGTTATTTCCAAATTCATAGGCTGACTGATTATGAGAAAATGATCGTGGCGACAATCAGTTTCGAAGGACCAGCCTTAAATTGGTATAGAGTGCAGGAAGAACGAGACAATTTCAAGAATTGGTTGGATTTAAAAGAACGATTACTCATACGATTCCGATCAGTAAGGGAAGGATTGATTTGCGGGCAGTTCCTAAGAATCCGACAAGAATCAAGCATGGAGGAATATCGTAATCAATTCGATAAATTGATGGCGCCTGTATCAGATTTACCAGATCGGGTAATTGAGGAAACATTTATGAATGGACTTTTACCGTGGATTAAGGCCGAGGTCGAGTTTTGTAGACCGGTCGGTTTAGCCGAAATGATGCTATTGGCCCAGCTCACTAAAAATTGGGAAATCATCCGAAACGAAGCCAATCTTAAAAGCTACAATGGAGGGGAACATCAAACAGAATCAGCAGAAACGCCCTATCTGATCGAGAACCATGAATGGAGAGCTGACCCAGAAGAAGTTTATGGATACATGAAGAATAAGATTGCTGGATGGGATGTGCTGATCAAATGGAAAGGATTGTCTCGAAATGAGGCAACATGGGAAGATTATGATGAAATTCAACAGAAGTTTCCCTAGCTTCACCTTGAGGACAAGGTGAATTTGGAGAAGGAGTGTAATGATAGACCACCACCTCCTATAATACATCAGTACAGCCATAAAGGAAAGAAATAGATAGCAAGTTAGTTAGCGTAAACAACCAAATAAATAGTTAGGCTGTTATAGAAGTTTGTTACAGAAATAGTTAGAAAGTTAGTTAGGAAATCTGTTAAAGAAGTAGTTGAATATGTGCATTATAAATAACTATAGAAGTCCAGTGAATAGGAGAGAAAATCTTATGAAGAAAGTCTTGTGTTAATTCTTGAAAGATAGAATAACCGAGAGAGAGAGGATCACTACTTGTAATTGAGATTTGATCAATAAAGTGTAATTGAATACCAG

mRNA sequence

ATGAAGAAAGTCTTGTGTTAATTCTTGAAAGATAGAATAACCGAGAGAGAGAGGATTACTACTTGTAATTGAGATTTGATATCAATAAAGTGTAATTGAATACTAGTGGAGTTCCATCAAATTGGTATCAGAGCAGTTCAATCCTGGACAAGAAAAGAAAAATGGCAAAGAAAGCCGAAGAGAGATTTGAAGTCATTGAGCAAGAGATTATCAACATCCAAACCGAGTTACAAAGAATACCGATACTTGAAGCGAAAATCACGAAACACTTAGAGAAGATAGATTCTCAGAATGAACAAATTCAACATCAGCAACAATTAATCTTGAAGTATATCGAAGGAATGATGAAAGAACGATCAATAACACACGAATCGGATGGATCATCAAGCAAAATGAAAACAAAAATGGCAGAACTAATCGATGAAGTGAACGGAAATGAAAAAGATGGTGAAGAGAAAAACAATGATCGAAGTAAGTTCAAAAAAATCGAGATGCCAGTGTTTAATGGTGAAGATCCAGATGCGTGGCTATTTCGTGCAGATCGTTATTTCCAAATTCATAGGCTGACTGATTATGAGAAAATGATCGTGGCGACAATCAGTTTCGAAGGACCAGCCTTAAATTGGTATAGAGTGCAGGAAGAACGAGACAATTTCAAGAATTGGTTGGATTTAAAAGAACGATTACTCATACGATTCCGATCAGTAAGGGAAGGATTGATTTGCGGGCAGTTCCTAAGAATCCGACAAGAATCAAGCATGGAGGAATATCGTAATCAATTCGATAAATTGATGGCGCCTGTATCAGATTTACCAGATCGGGTAATTGAGGAAACATTTATGAATGGACTTTTACCGTGGATTAAGGCCGAGGTCGAGTTTTGTAGACCGGTCGGTTTAGCCGAAATGATGCTATTGGCCCAGCTCACTAAAAATTGGGAAATCATCCGAAACGAAGCCAATCTTAAAAGCTACAATGGAGGGGAACATCAAACAGAATCAGCAGAAACGCCCTATCTGATCGAGAACCATGAATGGAGAGCTGACCCAGAAGAAGTTTATGGATACATGAAGAATAAGATTGCTGGATGGGATGTGCTGATCAAATGGAAAGGATTGTCTCGAAATGAGGCAACATGGGAAGATTATGATGAAATTCAACAGAAGTTTCCCTAGCTTCACCTTGAGGACAAGGTGAATTTGGAGAAGGAGTGTAATGATAGACCACCACCTCCTATAATACATCAGTACAGCCATAAAGGAAAGAAATAGATAGCAAGTTAGTTAGCGTAAACAACCAAATAAATAGTTAGGCTGTTATAGAAGTTTGTTACAGAAATAGTTAGAAAGTTAGTTAGGAAATCTGTTAAAGAAGTAGTTGAATATGTGCATTATAAATAACTATAGAAGTCCAGTGAATAGGAGAGAAAATCTTATGAAGAAAGTCTTGTGTTAATTCTTGAAAGATAGAATAACCGAGAGAGAGAGGATCACTACTTGTAATTGAGATTTGATCAATAAAGTGTAATTGAATACCAG

Coding sequence (CDS)

ATGGCAAAGAAAGCCGAAGAGAGATTTGAAGTCATTGAGCAAGAGATTATCAACATCCAAACCGAGTTACAAAGAATACCGATACTTGAAGCGAAAATCACGAAACACTTAGAGAAGATAGATTCTCAGAATGAACAAATTCAACATCAGCAACAATTAATCTTGAAGTATATCGAAGGAATGATGAAAGAACGATCAATAACACACGAATCGGATGGATCATCAAGCAAAATGAAAACAAAAATGGCAGAACTAATCGATGAAGTGAACGGAAATGAAAAAGATGGTGAAGAGAAAAACAATGATCGAAGTAAGTTCAAAAAAATCGAGATGCCAGTGTTTAATGGTGAAGATCCAGATGCGTGGCTATTTCGTGCAGATCGTTATTTCCAAATTCATAGGCTGACTGATTATGAGAAAATGATCGTGGCGACAATCAGTTTCGAAGGACCAGCCTTAAATTGGTATAGAGTGCAGGAAGAACGAGACAATTTCAAGAATTGGTTGGATTTAAAAGAACGATTACTCATACGATTCCGATCAGTAAGGGAAGGATTGATTTGCGGGCAGTTCCTAAGAATCCGACAAGAATCAAGCATGGAGGAATATCGTAATCAATTCGATAAATTGATGGCGCCTGTATCAGATTTACCAGATCGGGTAATTGAGGAAACATTTATGAATGGACTTTTACCGTGGATTAAGGCCGAGGTCGAGTTTTGTAGACCGGTCGGTTTAGCCGAAATGATGCTATTGGCCCAGCTCACTAAAAATTGGGAAATCATCCGAAACGAAGCCAATCTTAAAAGCTACAATGGAGGGGAACATCAAACAGAATCAGCAGAAACGCCCTATCTGATCGAGAACCATGAATGGAGAGCTGACCCAGAAGAAGTTTATGGATACATGAAGAATAAGATTGCTGGATGGGATGTGCTGATCAAATGGAAAGGATTGTCTCGAAATGAGGCAACATGGGAAGATTATGATGAAATTCAACAGAAGTTTCCCTAG

Protein sequence

MAKKAEERFEVIEQEIINIQTELQRIPILEAKITKHLEKIDSQNEQIQHQQQLILKYIEGMMKERSITHESDGSSSKMKTKMAELIDEVNGNEKDGEEKNNDRSKFKKIEMPVFNGEDPDAWLFRADRYFQIHRLTDYEKMIVATISFEGPALNWYRVQEERDNFKNWLDLKERLLIRFRSVREGLICGQFLRIRQESSMEEYRNQFDKLMAPVSDLPDRVIEETFMNGLLPWIKAEVEFCRPVGLAEMMLLAQLTKNWEIIRNEANLKSYNGGEHQTESAETPYLIENHEWRADPEEVYGYMKNKIAGWDVLIKWKGLSRNEATWEDYDEIQQKFP

Homology

[Close]

BLAST of MELO.jh011740.1 vs. NCBI nr
Match: TYK10830.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 678 bits (1749), Expect = 6.20e-246
Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0


Query: 1   MAKKAEERFEVIEQEIINIQTELQRIPILEAKITKHLEKIDSQNEQIQHQQQLILKYIEG 60
           MAKKAEERFEVIEQEIINIQTELQRIPILEAKITKHLEKIDSQNEQIQHQQQLILKYIEG
Sbjct: 1   MAKKAEERFEVIEQEIINIQTELQRIPILEAKITKHLEKIDSQNEQIQHQQQLILKYIEG 60

Query: 61  MMKERSITHESDGSSSKMKTKMAELIDEVNGNEKDGEEKNNDRSKFKKIEMPVFNGEDPD 120
           MMKERSITHESDGSSSKMKTKMAELIDEVNGNEKDGEEKNNDRSKFKKIEMPVFNGEDPD
Sbjct: 61  MMKERSITHESDGSSSKMKTKMAELIDEVNGNEKDGEEKNNDRSKFKKIEMPVFNGEDPD 120

Query: 121 AWLFRADRYFQIHRLTDYEKMIVATISFEGPALNWYRVQEERDNFKNWLDLKERLLIRFR 180
           AWLFRADRYFQIHRLTDYEKMIVATISFEGPALNWYRVQEERDNFKNWLDLKERLLIRFR
Sbjct: 121 AWLFRADRYFQIHRLTDYEKMIVATISFEGPALNWYRVQEERDNFKNWLDLKERLLIRFR 180

Query: 181 SVREGLICGQFLRIRQESSMEEYRNQFDKLMAPVSDLPDRVIEETFMNGLLPWIKAEVEF 240
           SVREGLICGQFLRIRQESSMEEYRNQFDKLMAPVSDLPDRVIEETFMNGLLPWIKAEVEF
Sbjct: 181 SVREGLICGQFLRIRQESSMEEYRNQFDKLMAPVSDLPDRVIEETFMNGLLPWIKAEVEF 240

Query: 241 CRPVGLAEMMLLAQLTKNWEIIRNEANLKSYNGGEHQTESAETPYLIENHEWRADPEEVY 300
           CRPVGLAEMMLLAQLTKNWEIIRNEANLKSYNGGEHQTESAETPYLIENHEWRADPEEVY
Sbjct: 241 CRPVGLAEMMLLAQLTKNWEIIRNEANLKSYNGGEHQTESAETPYLIENHEWRADPEEVY 300

Query: 301 GYMKNKIAGWDVLIKWKGLSRNEATWEDYDEIQQKFP 337
           GYMKNKIAGWDVLIKWKGLSRNEATWEDYDEIQQKFP
Sbjct: 301 GYMKNKIAGWDVLIKWKGLSRNEATWEDYDEIQQKFP 337

[Close]

BLAST of MELO.jh011740.1 vs. NCBI nr
Match: KAA0050168.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 455 bits (1170), Expect = 3.20e-159
Identity = 220/243 (90.53%), Postives = 229/243 (94.24%), Query Frame = 0


Query: 78  MKTKMAELIDEVNGNEKDGEEKNNDRSKFKKIEMPVFNGEDPDAWLFRADRYFQIHRLTD 137
           MKT+MAELIDEVNGNEKD EEKNND+SKFKK+EMPVFNGEDPDAWLFR DRYFQIH+LTD
Sbjct: 1   MKTEMAELIDEVNGNEKDVEEKNNDQSKFKKVEMPVFNGEDPDAWLFRVDRYFQIHKLTD 60

Query: 138 YEKMIVATISFEGPALNWYRVQEERDNFKNWLDLKERLLIRFRSVREGLICGQFLRIRQE 197
            EKM +ATISF+G  LNWYR QEERD FKNWLDLKERLLIRFRSVREG ICGQFLRIRQE
Sbjct: 61  LEKMTMATISFKGLTLNWYRAQEERDKFKNWLDLKERLLIRFRSVREGSICGQFLRIRQE 120

Query: 198 SSMEEYRNQFDKLMAPVSDLPDRVIEETFMNGLLPWIKAEVEFCRPVGLAEMMLLAQLTK 257
           SSMEEYRNQFDKLMAPVSDLPDRVIEETFMNGLLPWIKAEVEFCRPVGLAEMMLLAQLTK
Sbjct: 121 SSMEEYRNQFDKLMAPVSDLPDRVIEETFMNGLLPWIKAEVEFCRPVGLAEMMLLAQLTK 180

Query: 258 NWEIIRNEANLKSYNGGEHQTESAETPYLIENHEWRADPEEVYGYMKNKIAGWDVLIKWK 317
           N EII+NEANLK Y+GGEHQTES E PYL ENH+WRADPEEVYGYMKNKIAGWDVLIKWK
Sbjct: 181 NREIIQNEANLKGYSGGEHQTESTEMPYLTENHKWRADPEEVYGYMKNKIAGWDVLIKWK 240

Query: 318 GLS 320
           GLS
Sbjct: 241 GLS 243

[Close]

BLAST of MELO.jh011740.1 vs. NCBI nr
Match: KAA0034982.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa] >TYK02324.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 443 bits (1140), Expect = 7.02e-151
Identity = 225/276 (81.52%), Postives = 249/276 (90.22%), Query Frame = 0


Query: 1   MAKKAEERFEVIEQEIINIQTELQRIPILEAKITKHLEKIDSQNEQIQHQQQLILKYIEG 60
           MAKKAEERFE IEQEIINIQTELQRIP+LEAKITKHLEKIDSQNEQ QHQQQLIL++IEG
Sbjct: 1   MAKKAEERFEAIEQEIINIQTELQRIPMLEAKITKHLEKIDSQNEQNQHQQQLILQHIEG 60

Query: 61  MMKERSITHESDGSSSKMKTKMAELIDEVNGNEKDGEEKNNDRSKFKKIEMPVFNGEDPD 120
           MMK +S T ES+ S+SK KTK+ E I+E N NEK+GEEKNNDRSKFKK+EM VFNGEDPD
Sbjct: 61  MMKGQSTTRESERSTSKAKTKVTEPINEGNENEKNGEEKNNDRSKFKKVEMLVFNGEDPD 120

Query: 121 AWLFRADRYFQIHRLTDYEKMIVATISFEGPALNWYRVQEERDNFKNWLDLKERLLIRFR 180
           AWLFRADRYFQIH LTD +KM VATISFEGPALNWYR QEERD FK+W +LKERLL+RFR
Sbjct: 121 AWLFRADRYFQIHMLTDSKKMTVATISFEGPALNWYRAQEERDKFKDWANLKERLLVRFR 180

Query: 181 SVREGLICGQFLRIRQESSMEEYRNQFDKLMAPVSDLPDRVIEETFMNGLLPWIKAEVEF 240
           S REG ICGQFLRI+QESS+EEYRN+FD+LMAPVSDLPDRVIEETFM GL PWIKAEVEF
Sbjct: 181 STREGSICGQFLRIQQESSVEEYRNKFDRLMAPVSDLPDRVIEETFMGGLFPWIKAEVEF 240

Query: 241 CRPVGLAEMMLLAQLTKNWEIIRNEANLKSYNGGEH 276
           CRP+GLAEMMLLAQL +N E IRNEA LK ++GG++
Sbjct: 241 CRPIGLAEMMLLAQLMENREKIRNEAGLKGHSGGKY 276

[Close]

BLAST of MELO.jh011740.1 vs. NCBI nr
Match: KAA0042929.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa] >TYK05328.1 transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 434 bits (1117), Expect = 7.70e-151
Identity = 217/260 (83.46%), Postives = 221/260 (85.00%), Query Frame = 0


Query: 78  MKTKMAELIDEVNGNEKDGEEKNNDRSKFKKIEMPVFNGEDPDAWLFRADRYFQIHRLTD 137
           MKTKMAELIDEVNGNEKDGEEKN+D+SKFKKIEMPVFNGEDPD WLFR DRYFQIHRLTD
Sbjct: 1   MKTKMAELIDEVNGNEKDGEEKNSDQSKFKKIEMPVFNGEDPDVWLFRVDRYFQIHRLTD 60

Query: 138 YEKMIVATISFEGPALNWYRVQEERDNFKNWLDLKERLLIRFRSVREGLICGQFLRIRQE 197
            EKMIVATISFEGPALNW                            EG ICGQFLRIRQE
Sbjct: 61  CEKMIVATISFEGPALNW----------------------------EGSICGQFLRIRQE 120

Query: 198 SSMEEYRNQFDKLMAPVSDLPDRVIEETFMNGLLPWIKAEVEFCRPVGLAEMMLLAQLTK 257
           S +EEYRNQFDKLMAPVSDLP RVIEETFMNGLLPWIKAEVEFCRPVGLAEMMLLAQLTK
Sbjct: 121 SGVEEYRNQFDKLMAPVSDLPYRVIEETFMNGLLPWIKAEVEFCRPVGLAEMMLLAQLTK 180

Query: 258 NWEIIRNEANLKSYNGGEHQTESAETPYLIENHEWRADPEEVYGYMKNKIAGWDVLIKWK 317
           N EIIRNEANLK Y+GGEHQTESAETPYLIENHEWRADPEEVYG MKNKI GWDVLIKWK
Sbjct: 181 NREIIRNEANLKGYSGGEHQTESAETPYLIENHEWRADPEEVYGCMKNKIVGWDVLIKWK 232

Query: 318 GLSRNEATWEDYDEIQQKFP 337
           GLSRNEATWEDYDEIQ KFP
Sbjct: 241 GLSRNEATWEDYDEIQHKFP 232

[Close]

BLAST of MELO.jh011740.1 vs. NCBI nr
Match: KAA0036018.1 (transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 350 bits (897), Expect = 7.20e-117
Identity = 173/216 (80.09%), Postives = 193/216 (89.35%), Query Frame = 0


Query: 61  MMKERSITHESDGSSSKMKTKMAELIDEVNGNEKDGEEKNNDRSKFKKIEMPVFNGEDPD 120
           MMK +S T ES+ S+SK KTK+ ELIDE N NEK+GEEKNNDRSKFKK+EMPVFNGEDPD
Sbjct: 1   MMKGQSTTRESEESTSKAKTKVTELIDEGNENEKNGEEKNNDRSKFKKVEMPVFNGEDPD 60

Query: 121 AWLFRADRYFQIHRLTDYEKMIVATISFEGPALNWYRVQEERDNFKNWLDLKERLLIRFR 180
           AWLFRADRYFQIHRLTD EKM +ATISFEGPALNWYR QEERD FK+W +LKERLL+RFR
Sbjct: 61  AWLFRADRYFQIHRLTDSEKMTIATISFEGPALNWYRAQEERDKFKDWANLKERLLVRFR 120

Query: 181 SVREGLICGQFLRIRQESSMEEYRNQFDKLMAPVSDLPDRVIEETFMNGLLPWIKAEVEF 240
           S REG I  QFLRI+QESS+EEY+N+FD+LMAPVSDLPDRVIEETFM GL PWIKAEVEF
Sbjct: 121 SSREGSIYLQFLRIQQESSVEEYQNKFDRLMAPVSDLPDRVIEETFMGGLFPWIKAEVEF 180

Query: 241 CRPVGLAEMMLLAQLTKNWEIIRNEANLKSYNGGEH 276
           CRP GLAEMMLLAQLT+N E IRNEA+LK Y+GG++
Sbjct: 181 CRPTGLAEMMLLAQLTENREKIRNEASLKGYSGGKY 216

[Close]

BLAST of MELO.jh011740.1 vs. ExPASy TrEMBL
Match: A0A5D3CHI3 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001490 PE=4 SV=1)

HSP 1 Score: 678 bits (1749), Expect = 3.00e-246
Identity = 337/337 (100.00%), Postives = 337/337 (100.00%), Query Frame = 0


Query: 1   MAKKAEERFEVIEQEIINIQTELQRIPILEAKITKHLEKIDSQNEQIQHQQQLILKYIEG 60
           MAKKAEERFEVIEQEIINIQTELQRIPILEAKITKHLEKIDSQNEQIQHQQQLILKYIEG
Sbjct: 1   MAKKAEERFEVIEQEIINIQTELQRIPILEAKITKHLEKIDSQNEQIQHQQQLILKYIEG 60

Query: 61  MMKERSITHESDGSSSKMKTKMAELIDEVNGNEKDGEEKNNDRSKFKKIEMPVFNGEDPD 120
           MMKERSITHESDGSSSKMKTKMAELIDEVNGNEKDGEEKNNDRSKFKKIEMPVFNGEDPD
Sbjct: 61  MMKERSITHESDGSSSKMKTKMAELIDEVNGNEKDGEEKNNDRSKFKKIEMPVFNGEDPD 120

Query: 121 AWLFRADRYFQIHRLTDYEKMIVATISFEGPALNWYRVQEERDNFKNWLDLKERLLIRFR 180
           AWLFRADRYFQIHRLTDYEKMIVATISFEGPALNWYRVQEERDNFKNWLDLKERLLIRFR
Sbjct: 121 AWLFRADRYFQIHRLTDYEKMIVATISFEGPALNWYRVQEERDNFKNWLDLKERLLIRFR 180

Query: 181 SVREGLICGQFLRIRQESSMEEYRNQFDKLMAPVSDLPDRVIEETFMNGLLPWIKAEVEF 240
           SVREGLICGQFLRIRQESSMEEYRNQFDKLMAPVSDLPDRVIEETFMNGLLPWIKAEVEF
Sbjct: 181 SVREGLICGQFLRIRQESSMEEYRNQFDKLMAPVSDLPDRVIEETFMNGLLPWIKAEVEF 240

Query: 241 CRPVGLAEMMLLAQLTKNWEIIRNEANLKSYNGGEHQTESAETPYLIENHEWRADPEEVY 300
           CRPVGLAEMMLLAQLTKNWEIIRNEANLKSYNGGEHQTESAETPYLIENHEWRADPEEVY
Sbjct: 241 CRPVGLAEMMLLAQLTKNWEIIRNEANLKSYNGGEHQTESAETPYLIENHEWRADPEEVY 300

Query: 301 GYMKNKIAGWDVLIKWKGLSRNEATWEDYDEIQQKFP 337
           GYMKNKIAGWDVLIKWKGLSRNEATWEDYDEIQQKFP
Sbjct: 301 GYMKNKIAGWDVLIKWKGLSRNEATWEDYDEIQQKFP 337

[Close]

BLAST of MELO.jh011740.1 vs. ExPASy TrEMBL
Match: A0A5A7U4I6 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G002010 PE=4 SV=1)

HSP 1 Score: 455 bits (1170), Expect = 1.55e-159
Identity = 220/243 (90.53%), Postives = 229/243 (94.24%), Query Frame = 0


Query: 78  MKTKMAELIDEVNGNEKDGEEKNNDRSKFKKIEMPVFNGEDPDAWLFRADRYFQIHRLTD 137
           MKT+MAELIDEVNGNEKD EEKNND+SKFKK+EMPVFNGEDPDAWLFR DRYFQIH+LTD
Sbjct: 1   MKTEMAELIDEVNGNEKDVEEKNNDQSKFKKVEMPVFNGEDPDAWLFRVDRYFQIHKLTD 60

Query: 138 YEKMIVATISFEGPALNWYRVQEERDNFKNWLDLKERLLIRFRSVREGLICGQFLRIRQE 197
            EKM +ATISF+G  LNWYR QEERD FKNWLDLKERLLIRFRSVREG ICGQFLRIRQE
Sbjct: 61  LEKMTMATISFKGLTLNWYRAQEERDKFKNWLDLKERLLIRFRSVREGSICGQFLRIRQE 120

Query: 198 SSMEEYRNQFDKLMAPVSDLPDRVIEETFMNGLLPWIKAEVEFCRPVGLAEMMLLAQLTK 257
           SSMEEYRNQFDKLMAPVSDLPDRVIEETFMNGLLPWIKAEVEFCRPVGLAEMMLLAQLTK
Sbjct: 121 SSMEEYRNQFDKLMAPVSDLPDRVIEETFMNGLLPWIKAEVEFCRPVGLAEMMLLAQLTK 180

Query: 258 NWEIIRNEANLKSYNGGEHQTESAETPYLIENHEWRADPEEVYGYMKNKIAGWDVLIKWK 317
           N EII+NEANLK Y+GGEHQTES E PYL ENH+WRADPEEVYGYMKNKIAGWDVLIKWK
Sbjct: 181 NREIIQNEANLKGYSGGEHQTESTEMPYLTENHKWRADPEEVYGYMKNKIAGWDVLIKWK 240

Query: 318 GLS 320
           GLS
Sbjct: 241 GLS 243

[Close]

BLAST of MELO.jh011740.1 vs. ExPASy TrEMBL
Match: A0A5D3BT54 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00110 PE=4 SV=1)

HSP 1 Score: 443 bits (1140), Expect = 3.40e-151
Identity = 225/276 (81.52%), Postives = 249/276 (90.22%), Query Frame = 0


Query: 1   MAKKAEERFEVIEQEIINIQTELQRIPILEAKITKHLEKIDSQNEQIQHQQQLILKYIEG 60
           MAKKAEERFE IEQEIINIQTELQRIP+LEAKITKHLEKIDSQNEQ QHQQQLIL++IEG
Sbjct: 1   MAKKAEERFEAIEQEIINIQTELQRIPMLEAKITKHLEKIDSQNEQNQHQQQLILQHIEG 60

Query: 61  MMKERSITHESDGSSSKMKTKMAELIDEVNGNEKDGEEKNNDRSKFKKIEMPVFNGEDPD 120
           MMK +S T ES+ S+SK KTK+ E I+E N NEK+GEEKNNDRSKFKK+EM VFNGEDPD
Sbjct: 61  MMKGQSTTRESERSTSKAKTKVTEPINEGNENEKNGEEKNNDRSKFKKVEMLVFNGEDPD 120

Query: 121 AWLFRADRYFQIHRLTDYEKMIVATISFEGPALNWYRVQEERDNFKNWLDLKERLLIRFR 180
           AWLFRADRYFQIH LTD +KM VATISFEGPALNWYR QEERD FK+W +LKERLL+RFR
Sbjct: 121 AWLFRADRYFQIHMLTDSKKMTVATISFEGPALNWYRAQEERDKFKDWANLKERLLVRFR 180

Query: 181 SVREGLICGQFLRIRQESSMEEYRNQFDKLMAPVSDLPDRVIEETFMNGLLPWIKAEVEF 240
           S REG ICGQFLRI+QESS+EEYRN+FD+LMAPVSDLPDRVIEETFM GL PWIKAEVEF
Sbjct: 181 STREGSICGQFLRIQQESSVEEYRNKFDRLMAPVSDLPDRVIEETFMGGLFPWIKAEVEF 240

Query: 241 CRPVGLAEMMLLAQLTKNWEIIRNEANLKSYNGGEH 276
           CRP+GLAEMMLLAQL +N E IRNEA LK ++GG++
Sbjct: 241 CRPIGLAEMMLLAQLMENREKIRNEAGLKGHSGGKY 276

[Close]

BLAST of MELO.jh011740.1 vs. ExPASy TrEMBL
Match: A0A5D3C2A4 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001550 PE=4 SV=1)

HSP 1 Score: 434 bits (1117), Expect = 3.73e-151
Identity = 217/260 (83.46%), Postives = 221/260 (85.00%), Query Frame = 0


Query: 78  MKTKMAELIDEVNGNEKDGEEKNNDRSKFKKIEMPVFNGEDPDAWLFRADRYFQIHRLTD 137
           MKTKMAELIDEVNGNEKDGEEKN+D+SKFKKIEMPVFNGEDPD WLFR DRYFQIHRLTD
Sbjct: 1   MKTKMAELIDEVNGNEKDGEEKNSDQSKFKKIEMPVFNGEDPDVWLFRVDRYFQIHRLTD 60

Query: 138 YEKMIVATISFEGPALNWYRVQEERDNFKNWLDLKERLLIRFRSVREGLICGQFLRIRQE 197
            EKMIVATISFEGPALNW                            EG ICGQFLRIRQE
Sbjct: 61  CEKMIVATISFEGPALNW----------------------------EGSICGQFLRIRQE 120

Query: 198 SSMEEYRNQFDKLMAPVSDLPDRVIEETFMNGLLPWIKAEVEFCRPVGLAEMMLLAQLTK 257
           S +EEYRNQFDKLMAPVSDLP RVIEETFMNGLLPWIKAEVEFCRPVGLAEMMLLAQLTK
Sbjct: 121 SGVEEYRNQFDKLMAPVSDLPYRVIEETFMNGLLPWIKAEVEFCRPVGLAEMMLLAQLTK 180

Query: 258 NWEIIRNEANLKSYNGGEHQTESAETPYLIENHEWRADPEEVYGYMKNKIAGWDVLIKWK 317
           N EIIRNEANLK Y+GGEHQTESAETPYLIENHEWRADPEEVYG MKNKI GWDVLIKWK
Sbjct: 181 NREIIRNEANLKGYSGGEHQTESAETPYLIENHEWRADPEEVYGCMKNKIVGWDVLIKWK 232

Query: 318 GLSRNEATWEDYDEIQQKFP 337
           GLSRNEATWEDYDEIQ KFP
Sbjct: 241 GLSRNEATWEDYDEIQHKFP 232

[Close]

BLAST of MELO.jh011740.1 vs. ExPASy TrEMBL
Match: A0A5A7SZK8 (Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00030 PE=4 SV=1)

HSP 1 Score: 350 bits (897), Expect = 3.49e-117
Identity = 173/216 (80.09%), Postives = 193/216 (89.35%), Query Frame = 0


Query: 61  MMKERSITHESDGSSSKMKTKMAELIDEVNGNEKDGEEKNNDRSKFKKIEMPVFNGEDPD 120
           MMK +S T ES+ S+SK KTK+ ELIDE N NEK+GEEKNNDRSKFKK+EMPVFNGEDPD
Sbjct: 1   MMKGQSTTRESEESTSKAKTKVTELIDEGNENEKNGEEKNNDRSKFKKVEMPVFNGEDPD 60

Query: 121 AWLFRADRYFQIHRLTDYEKMIVATISFEGPALNWYRVQEERDNFKNWLDLKERLLIRFR 180
           AWLFRADRYFQIHRLTD EKM +ATISFEGPALNWYR QEERD FK+W +LKERLL+RFR
Sbjct: 61  AWLFRADRYFQIHRLTDSEKMTIATISFEGPALNWYRAQEERDKFKDWANLKERLLVRFR 120

Query: 181 SVREGLICGQFLRIRQESSMEEYRNQFDKLMAPVSDLPDRVIEETFMNGLLPWIKAEVEF 240
           S REG I  QFLRI+QESS+EEY+N+FD+LMAPVSDLPDRVIEETFM GL PWIKAEVEF
Sbjct: 121 SSREGSIYLQFLRIQQESSVEEYQNKFDRLMAPVSDLPDRVIEETFMGGLFPWIKAEVEF 180

Query: 241 CRPVGLAEMMLLAQLTKNWEIIRNEANLKSYNGGEH 276
           CRP GLAEMMLLAQLT+N E IRNEA+LK Y+GG++
Sbjct: 181 CRPTGLAEMMLLAQLTENREKIRNEASLKGYSGGKY 216

[Close]

BLAST of MELO.jh011740.1 vs. TAIR 10
Match: AT1G67020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; Has 72 Blast hits to 72 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 66.2 bits (160), Expect = 5.6e-11
Identity = 29/84 (34.52%), Postives = 49/84 (58.33%), Query Frame = 0


Query: 100 NNDRSKFKKIEMPVFNGEDPDAWLFRADRYFQIHRLTDYEKMIVATISFEGPALNWYRVQ 159
           +N  S  ++IEMPVF+G     W  + +R+F++ R  D +K+ +  +S EG AL W+  +
Sbjct: 101 DNRSSLIRRIEMPVFDGSGVYEWFSKVERFFRVGRYQDSDKLDLVALSLEGVALKWFLRE 160

Query: 160 EERDNFKNWLDLKERLLIRFRSVR 184
                F++W   ++RLL RF  V+
Sbjct: 161 MSTLEFRDWNSFEQRLLARFDPVK 184

[Close]

BLAST of MELO.jh011740.1 vs. TAIR 10
Match: AT3G44713.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G14800.1); Has 69 Blast hits to 64 proteins in 24 species: Archae - 2; Bacteria - 10; Metazoa - 4; Fungi - 4; Plants - 36; Viruses - 1; Other Eukaryotes - 12 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 3.0e-04
Identity = 27/96 (28.12%), Postives = 49/96 (51.04%), Query Frame = 0


Query: 112 PVFNG--EDPDAWLFRADRYFQIHRLTDYEKMIVATISFEGPALNWYRVQEERDNFKNWL 171
           P FNG   +  +W+   + +F     TD EKM +A    EG A  W+  +++   F++W 
Sbjct: 7   PTFNGVTHELRSWISWLEDFFVWENFTDDEKMNLAQSLIEGEAEAWFYRRQKMILFRSWE 66

Query: 172 DLKERLLIRFRSVREGLIC------GQFLRIRQESS 200
            L++ L++RF   ++  +        QFL+ R++ S
Sbjct: 67  HLRDCLVLRFGDRKDLELIRLLAKQDQFLKERRDES 102

The following BLAST results are available for this feature:

BLAST of MELO.jh011740.1 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK10830.1	6.20e-246	100.00	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0050168.1	3.20e-159	90.53	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]	[more]
KAA0034982.1	7.02e-151	81.52	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa] >TYK02324.1 t...	[more]
KAA0042929.1	7.70e-151	83.46	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa] >TYK05328.1 t...	[more]
KAA0036018.1	7.20e-117	80.09	transposon Tf2-1 polyprotein isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh011740.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO.jh011740.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CHI3	3.00e-246	100.00	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7U4I6	1.55e-159	90.53	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3BT54	3.40e-151	81.52	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5D3C2A4	3.73e-151	83.46	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A5A7SZK8	3.49e-117	80.09	Transposon Tf2-1 polyprotein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]

BLAST of MELO.jh011740.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67020.1	5.6e-11	34.52	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G44713.1	3.0e-04	28.13	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 2..22
None	No IPR available	GENE3D	2.40.50.40		coord: 297..337 e-value: 5.0E-6 score: 28.2
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 87..279
None	No IPR available	PANTHER	PTHR34482:SF20	SUBFAMILY NOT NAMED	coord: 87..279
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 312..337 e-value: 5.1E-6 score: 26.3
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 143..230 e-value: 1.7E-11 score: 44.2
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 294..337 score: 10.675101
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 281..336

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh011740.1.t1	MELO.jh011740.1.t1	mRNA