MELO.jh008731.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh008731.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr04: 26090166 .. 26091630 (+)
RNA-Seq ExpressionMELO.jh008731.1
SyntenyMELO.jh008731.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGTCACCTTTACTGTTATCAAAGATCTAATTAAGAACAAAATATCTTTAGCTGGTTTTGAATTGTCAACTCCTAAAGATATAGTTCATTACATTCGTGCTGAACATGGTTTAAGGATATCTTACCAAAAAGCATTGCTTGCTCGTGAGGCTGTGTTGAATGAGATTCGCGGATCTCCGGAGGACTCCTATAAGATGATACTCCAATTTGCATACATTTGGAACTCAACAACCCAGGTATATTGGCAATATACTTATTCATATATTTCACTAATTTTTCGTCATTATTTTCTTAACATTTCTTTCGTCATATGTTTACCTTTTTTTATGTTTATAGGTTCTGTTGTTTAATACAAAGTTGATGTCGATGGTAGATTTCTTTACTTCTTCATGGTATTATTTGCTTCCACTTTTTGTTGGTAACATTGTCGTCCAGTCATTTCTATTGATGAAACAAGTCTGAAAAATAAGTACAGTGGTACTCTTTTATCTGCTAACACCTGATGCCAATGATAAGATTTTTCCACCAGCCTTTTATGTTGTGGATTCTGAGAATGATTCTTCATAGACATGGTTTTGCAACCAACTGTAGAGAATTATAGATGACCGGAATGAGGTTGTCATAGTATCTGATAGACATAAAAGTATATGTAAAGCAATGGAGGTAGTTTTTCCCAACGTTGGACATTGCATGTGCCTTGTTCATTTACTTAGGAACCTGAAGTTGAAGTATAAGATAATAGTCGATACCGTATTTCATGCATGTGAGAAGGCTTTTAATATTGTAGACTTCAAACACGAAATGCGTTTGTTGGAATCTTCGTCCCTAGTATACGTGAGGAGCTTGAATCCATTGGTTTTGCTAAGTGGTCTCGTGCGTACTCACCACGTAGGATATATAATGTCATGACCACTAATATATCTGAGAGTTTGAATTCTGTCATTCTGAAGGCTAGGGAGTTACCGATATGTTTAATGCTTAAGGTTTTGCGGATGATGTTGCAAAGAGAGTTTTTTGAATGAAGAAATGAAGCTGATTATCAAGTAATAGATTTTACCAAAACTATTGAAGGTATATTAAGGGAACAGATTGAACGTAATCGATCAATGAAGGTATGCTCAATTTATATATACTTACATATTCTTCACATACATCACCATATTTCATATATACATTATATAATTCTTTTATATATTTGCAATGTTTCAACATCCCTTAATTATCATAAATATTAAATCATAAATGGAACCTTACAATATGTGATTTACTTACCTACGAAGGTTTGTAGTTACAGGATGTGGGATAGATTAGAAATACATTGTATGCATGGATGTGCTGTTTTCACCATGAAACATTTATCAATTAAGTCATATGTCTCATCTCTTTACTTGAACAACGCTTTGAGTTCAATATATAGAGGCGTAATAAATCCCTTAGGCGATCATCGACAATGGCAAATACCTGA

mRNA sequence

AGGTCACCTTTACTGTTATCAAAGATCTAATTAAGAACAAAATATCTTTAGCTGGTTTTGAATTGTCAACTCCTAAAGATATAGTTCATTACATTCGTGCTGAACATGGTTTAAGGATATCTTACCAAAAAGCATTGCTTGCTCGTGAGGCTGTGTTGAATGAGATTCGCGGATCTCCGGAGGACTCCTATAAGATGATACTCCAATTTGCATACATTTGGAACTCAACAACCCAGGTTCTGTTGTTTAATACAAAGTTGATGTCGATGAGGCGTAATAAATCCCTTAGGCGATCATCGACAATGGCAAATACCTGA

Coding sequence (CDS)

ATGATACTCCAATTTGCATACATTTGGAACTCAACAACCCAGGTTCTGTTGTTTAATACAAAGTTGATGTCGATGAGGCGTAATAAATCCCTTAGGCGATCATCGACAATGGCAAATACCTGA

Protein sequence

MILQFAYIWNSTTQVLLFNTKLMSMRRNKSLRRSSTMANT
Homology
[Close]
BLAST of MELO.jh008731.1 vs. NCBI nr
Match: TYK29975.1 (protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 51.6 bits (122), Expect = 4.98e-06
Identity = 25/25 (100.00%), Postives = 25/25 (100.00%), Query Frame = 0 

Query: 1   MILQFAYIWNSTTQVLLFNTKLMSM 25
           MILQFAYIWNSTTQVLLFNTKLMSM
Sbjct: 129 MILQFAYIWNSTTQVLLFNTKLMSM 153

[Close]
BLAST of MELO.jh008731.1 vs. ExPASy TrEMBL
Match: A0A5D3E3V7 (Protein FAR1-RELATED SEQUENCE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold734G00020 PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.41e-06
Identity = 25/25 (100.00%), Postives = 25/25 (100.00%), Query Frame = 0 

Query: 1   MILQFAYIWNSTTQVLLFNTKLMSM 25
           MILQFAYIWNSTTQVLLFNTKLMSM
Sbjct: 129 MILQFAYIWNSTTQVLLFNTKLMSM 153

The following BLAST results are available for this feature:
BLAST of MELO.jh008731.1 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK29975.14.98e-06100.00protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa][more]
BLAST of MELO.jh008731.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh008731.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3E3V72.41e-06100.00Protein FAR1-RELATED SEQUENCE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
BLAST of MELO.jh008731.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh008731.1.t1MELO.jh008731.1.t1mRNA