MELO.jh001315.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh001315.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionNADP-dependent D-sorbitol-6-phosphate dehydrogenase-like
Locationchr01: 17109037 .. 17109270 (-)
RNA-Seq ExpressionMELO.jh001315.1
SyntenyMELO.jh001315.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GAACTTGCTGAAAAATATGGGAGAAGCCCTGCTCAAATTGTGCTAAGGTGGGGAATTCAAAGGAACACTACAGTTATACCAAAAACTTCAAAATTGAAGAGATTGGAAGAGAATTTGCAAGTTTTTGATTTTGAGCTTGAAGAGGAAGATATGGATCTCATCAAAAATATTGACAATAAATATAGAACCAATCTCACACCTGCAAGGTCTTGGGGCATTGATTTATATGCTTAA

mRNA sequence

GAACTTGCTGAAAAATATGGGAGAAGCCCTGCTCAAATTGTGCTAAGGTGGGGAATTCAAAGGAACACTACAGTTATACCAAAAACTTCAAAATTGAAGAGATTGGAAGAGAATTTGCAAGTTTTTGATTTTGAGCTTGAAGAGGAAGATATGGATCTCATCAAAAATATTGACAATAAATATAGAACCAATCTCACACCTGCAAGGTCTTGGGGCATTGATTTATATGCTTAA

Coding sequence (CDS)

ATGGATCTCATCAAAAATATTGACAATAAATATAGAACCAATCTCACACCTGCAAGGTCTTGGGGCATTGATTTATATGCTTAA

Protein sequence

MDLIKNIDNKYRTNLTPARSWGIDLYA
Homology
BLAST of MELO.jh001315.1 vs. NCBI nr
Match: XP_008448122.1 (PREDICTED: NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like, partial [Cucumis melo])

HSP 1 Score: 59.3 bits (142), Expect = 4.31e-10
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0

Query: 1   MDLIKNIDNKYRTNLTPARSWGIDLYA 27
           MDLIKNIDNKYR+NLTPARSWGIDLYA
Sbjct: 80  MDLIKNIDNKYRSNLTPARSWGIDLYA 106

BLAST of MELO.jh001315.1 vs. NCBI nr
Match: XP_011658562.1 (NADP-dependent D-sorbitol-6-phosphate dehydrogenase [Cucumis sativus] >KGN43183.1 hypothetical protein Csa_020507 [Cucumis sativus])

HSP 1 Score: 56.6 bits (135), Expect = 4.92e-08
Identity = 25/27 (92.59%), Postives = 26/27 (96.30%), Query Frame = 0

Query: 1   MDLIKNIDNKYRTNLTPARSWGIDLYA 27
           MDLIK+ID KYRTNLTPARSWGIDLYA
Sbjct: 284 MDLIKSIDKKYRTNLTPARSWGIDLYA 310

BLAST of MELO.jh001315.1 vs. NCBI nr
Match: OMP03125.1 (Aldo/keto reductase [Corchorus olitorius])

HSP 1 Score: 47.4 bits (111), Expect = 9.61e-05
Identity = 20/27 (74.07%), Postives = 22/27 (81.48%), Query Frame = 0

Query: 1   MDLIKNIDNKYRTNLTPARSWGIDLYA 27
           MDLIK +D KYRTN   A+SWGIDLYA
Sbjct: 284 MDLIKTVDRKYRTNQVSAKSWGIDLYA 310

BLAST of MELO.jh001315.1 vs. NCBI nr
Match: OMO74426.1 (Aldo/keto reductase [Corchorus capsularis])

HSP 1 Score: 47.4 bits (111), Expect = 9.61e-05
Identity = 20/27 (74.07%), Postives = 22/27 (81.48%), Query Frame = 0

Query: 1   MDLIKNIDNKYRTNLTPARSWGIDLYA 27
           MDLIK +D KYRTN   A+SWGIDLYA
Sbjct: 284 MDLIKTVDRKYRTNQVSAKSWGIDLYA 310

BLAST of MELO.jh001315.1 vs. NCBI nr
Match: XP_008449805.1 (PREDICTED: NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like isoform X3 [Cucumis melo])

HSP 1 Score: 46.6 bits (109), Expect = 1.69e-04
Identity = 20/27 (74.07%), Postives = 22/27 (81.48%), Query Frame = 0

Query: 1   MDLIKNIDNKYRTNLTPARSWGIDLYA 27
           MDLIKNID KYRTNL    +WGID+YA
Sbjct: 225 MDLIKNIDKKYRTNLISTVAWGIDIYA 251

BLAST of MELO.jh001315.1 vs. ExPASy TrEMBL
Match: A0A1S3BJK1 (NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like OS=Cucumis melo OX=3656 GN=LOC103490412 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.09e-10
Identity = 26/27 (96.30%), Postives = 27/27 (100.00%), Query Frame = 0

Query: 1   MDLIKNIDNKYRTNLTPARSWGIDLYA 27
           MDLIKNIDNKYR+NLTPARSWGIDLYA
Sbjct: 80  MDLIKNIDNKYRSNLTPARSWGIDLYA 106

BLAST of MELO.jh001315.1 vs. ExPASy TrEMBL
Match: A0A0A0K145 (Aldo_ket_red domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G007810 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.38e-08
Identity = 25/27 (92.59%), Postives = 26/27 (96.30%), Query Frame = 0

Query: 1   MDLIKNIDNKYRTNLTPARSWGIDLYA 27
           MDLIK+ID KYRTNLTPARSWGIDLYA
Sbjct: 284 MDLIKSIDKKYRTNLTPARSWGIDLYA 310

BLAST of MELO.jh001315.1 vs. ExPASy TrEMBL
Match: A0A1R3HVP5 (Aldo/keto reductase OS=Corchorus capsularis OX=210143 GN=CCACVL1_16751 PE=4 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 4.65e-05
Identity = 20/27 (74.07%), Postives = 22/27 (81.48%), Query Frame = 0

Query: 1   MDLIKNIDNKYRTNLTPARSWGIDLYA 27
           MDLIK +D KYRTN   A+SWGIDLYA
Sbjct: 284 MDLIKTVDRKYRTNQVSAKSWGIDLYA 310

BLAST of MELO.jh001315.1 vs. ExPASy TrEMBL
Match: A0A1R3K7R8 (Aldo/keto reductase OS=Corchorus olitorius OX=93759 GN=COLO4_10622 PE=4 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 4.65e-05
Identity = 20/27 (74.07%), Postives = 22/27 (81.48%), Query Frame = 0

Query: 1   MDLIKNIDNKYRTNLTPARSWGIDLYA 27
           MDLIK +D KYRTN   A+SWGIDLYA
Sbjct: 284 MDLIKTVDRKYRTNQVSAKSWGIDLYA 310

BLAST of MELO.jh001315.1 vs. ExPASy TrEMBL
Match: A0A1S3BNJ1 (NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103491570 PE=4 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 8.20e-05
Identity = 20/27 (74.07%), Postives = 22/27 (81.48%), Query Frame = 0

Query: 1   MDLIKNIDNKYRTNLTPARSWGIDLYA 27
           MDLIKNID KYRTNL    +WGID+YA
Sbjct: 225 MDLIKNIDKKYRTNLISTVAWGIDIYA 251

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008448122.14.31e-1096.30PREDICTED: NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like, partial [Cu... [more]
XP_011658562.14.92e-0892.59NADP-dependent D-sorbitol-6-phosphate dehydrogenase [Cucumis sativus] >KGN43183.... [more]
OMP03125.19.61e-0574.07Aldo/keto reductase [Corchorus olitorius][more]
OMO74426.19.61e-0574.07Aldo/keto reductase [Corchorus capsularis][more]
XP_008449805.11.69e-0474.07PREDICTED: NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like isoform X3 [... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3BJK12.09e-1096.30NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like OS=Cucumis melo OX=3656... [more]
A0A0A0K1452.38e-0892.59Aldo_ket_red domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G00781... [more]
A0A1R3HVP54.65e-0574.07Aldo/keto reductase OS=Corchorus capsularis OX=210143 GN=CCACVL1_16751 PE=4 SV=1[more]
A0A1R3K7R84.65e-0574.07Aldo/keto reductase OS=Corchorus olitorius OX=93759 GN=COLO4_10622 PE=4 SV=1[more]
A0A1S3BNJ18.20e-0574.07NADP-dependent D-sorbitol-6-phosphate dehydrogenase-like isoform X3 OS=Cucumis m... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh001315.1.t1MELO.jh001315.1.t1mRNA