MC11g_new0484 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC11g_new0484
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionPlant protein of unknown function (DUF247)
LocationMC11: 18998205 .. 18998867 (-)
RNA-Seq ExpressionMC11g_new0484
SyntenyMC11g_new0484
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGAAACAATCACTATGGCATTGCCATCAGATTCAATTCTAAGCACAAATCTTGAGTGGGTTGTGAAAATCAATGAGCTTCTCCAACGAAATGATTTTCATACAGCTTTTGAGACTCCAATTTCTATCTTTCAAGTGCCAGATTGTATCAGAAACGACAGTCCAGAAGCCTTCACTCCTCGTCGTATTTCCTTGGGGCCTTACCACCATTCTCAACCACAGCTGCTCAAGTTGGAGCTCTTAAAGCTCGACACAGCAAAGAAGGTGAAAGACCATATCAACCTTCCTGAGTTCCACCAACTTGTCAGTGACAAACTCAATCCATTGGAGCTCAAAATCCGAGCATGTTTCGGCAAATATTTTGAACTGGGATGCGAGAGTTTGAGTTGGATAATGCTCATCGATTCCTTGTTCTTGATTCGCTTGCTTCATATCTTTGCTGAAGTGGAAGTAAAGTGTTATGATAAACGCCATGAACTCCCATTGCCAGAGCTTGATGCTGAACACCAACAAATGTACCTCAATCCTAAAGCAAGTTTGGTGGCTCGAAATGAGATCGTGGGTGACACTCTAATGTTGGAGAATCAAGTCCCATTTTGTGTTCTCAAAGAAATTTTATCAGGAACTCAAATCATCAATGATTTGCCAGTCTTATTATAA

mRNA sequence

ATGGCTGAAACAATCACTATGGCATTGCCATCAGATTCAATTCTAAGCACAAATCTTGAGTGGGTTGTGAAAATCAATGAGCTTCTCCAACGAAATGATTTTCATACAGCTTTTGAGACTCCAATTTCTATCTTTCAAGTGCCAGATTGTATCAGAAACGACAGTCCAGAAGCCTTCACTCCTCGTCGTATTTCCTTGGGGCCTTACCACCATTCTCAACCACAGCTGCTCAAGTTGGAGCTCTTAAAGCTCGACACAGCAAAGAAGGTGAAAGACCATATCAACCTTCCTGAGTTCCACCAACTTGTCAGTGACAAACTCAATCCATTGGAGCTCAAAATCCGAGCATGTTTCGGCAAATATTTTGAACTGGGATGCGAGAGTTTGAGTTGGATAATGCTCATCGATTCCTTGTTCTTGATTCGCTTGCTTCATATCTTTGCTGAAGTGGAAGTAAAGTGTTATGATAAACGCCATGAACTCCCATTGCCAGAGCTTGATGCTGAACACCAACAAATGTACCTCAATCCTAAAGCAAGTTTGGTGGCTCGAAATGAGATCGTGGGTGACACTCTAATGTTGGAGAATCAAGTCCCATTTTGTGTTCTCAAAGAAATTTTATCAGGAACTCAAATCATCAATGATTTGCCAGTCTTATTATAA

Coding sequence (CDS)

ATGGCTGAAACAATCACTATGGCATTGCCATCAGATTCAATTCTAAGCACAAATCTTGAGTGGGTTGTGAAAATCAATGAGCTTCTCCAACGAAATGATTTTCATACAGCTTTTGAGACTCCAATTTCTATCTTTCAAGTGCCAGATTGTATCAGAAACGACAGTCCAGAAGCCTTCACTCCTCGTCGTATTTCCTTGGGGCCTTACCACCATTCTCAACCACAGCTGCTCAAGTTGGAGCTCTTAAAGCTCGACACAGCAAAGAAGGTGAAAGACCATATCAACCTTCCTGAGTTCCACCAACTTGTCAGTGACAAACTCAATCCATTGGAGCTCAAAATCCGAGCATGTTTCGGCAAATATTTTGAACTGGGATGCGAGAGTTTGAGTTGGATAATGCTCATCGATTCCTTGTTCTTGATTCGCTTGCTTCATATCTTTGCTGAAGTGGAAGTAAAGTGTTATGATAAACGCCATGAACTCCCATTGCCAGAGCTTGATGCTGAACACCAACAAATGTACCTCAATCCTAAAGCAAGTTTGGTGGCTCGAAATGAGATCGTGGGTGACACTCTAATGTTGGAGAATCAAGTCCCATTTTGTGTTCTCAAAGAAATTTTATCAGGAACTCAAATCATCAATGATTTGCCAGTCTTATTATAA

Protein sequence

MAETITMALPSDSILSTNLEWVVKINELLQRNDFHTAFETPISIFQVPDCIRNDSPEAFTPRRISLGPYHHSQPQLLKLELLKLDTAKKVKDHINLPEFHQLVSDKLNPLELKIRACFGKYFELGCESLSWIMLIDSLFLIRLLHIFAEVEVKCYDKRHELPLPELDAEHQQMYLNPKASLVARNEIVGDTLMLENQVPFCVLKEILSGTQIINDLPVLL
Homology
BLAST of MC11g_new0484 vs. ExPASy Swiss-Prot
Match: P0C897 (Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana OX=3702 GN=At3g02645 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-26
Identity = 68/188 (36.17%), Postives = 103/188 (54.79%), Query Frame = 0

Query: 21  WVVKINELLQRN-DFHTAFETPISIFQVPDCIRNDSPEAFTPRRISLGPYHHSQPQLLKL 80
           WV+ + + L    + H   E  +SIF VP  +    P+++TP R+S+GPYH  +P+L ++
Sbjct: 21  WVINVQKSLDAELEEHDLEEVTVSIFNVPKALMCSHPDSYTPHRVSIGPYHCLKPELHEM 80

Query: 81  ELLKLDTAKKVKDHINLPEFHQLVSDKLNPLELKIRACFGKYFELGCESLSWIMLIDSLF 140
           E  KL  A+K+++  N   FH LV +KL  +E+KIRAC+ KY     E+L WIM +DS F
Sbjct: 81  ERYKLMIARKIRNQYNSFRFHDLV-EKLQSMEIKIRACYHKYIGFNGETLLWIMAVDSSF 140

Query: 141 LIRLLHIFAEVEVKCYDKRHELPLPELDAEHQQMYLNPKASLVARNEIVGDTLMLENQVP 200
           LI  L I++  +V+    R                       V  NEI+ D +M+ENQ+P
Sbjct: 141 LIEFLKIYSFRKVETLINR-----------------------VGHNEILRDIMMIENQIP 184

Query: 201 FCVLKEIL 208
             VL++ L
Sbjct: 201 LFVLRKTL 184

BLAST of MC11g_new0484 vs. ExPASy Swiss-Prot
Match: Q9SD53 (UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.0e-07
Identity = 51/176 (28.98%), Postives = 84/176 (47.73%), Query Frame = 0

Query: 44  IFQVPDCIRNDSPEAFTPRRISLGPYHHSQPQLLKLELLK-------LDTAKKVKDHINL 103
           IF+VP+     +P+A+ P+ +S+GPYH+ +  L  ++  K       LD AKK KD    
Sbjct: 48  IFRVPESFVALNPKAYKPKVVSIGPYHYGEKHLQMIQQHKPRLLQLFLDEAKK-KD---- 107

Query: 104 PEFHQLVSDKLNPLELKIRACFGKYFELGCESLSWIMLIDSLFLIRLLHIFAEVEVKCYD 163
            E + LV   ++ LE KIR  + +  + G   L ++M++D  F++ +  I +       D
Sbjct: 108 VEENVLVKAVVD-LEDKIRKSYSEELKTG-HDLMFMMVLDGCFILMVFLIMSGNIELSED 167

Query: 164 KRHELPLPELDAEHQQMYLNPKASLVARNEIVGDTLMLENQVPFCVLKEILSGTQI 213
               +P                      + I  D L+LENQVPF VL+ +  G++I
Sbjct: 168 PIFSIPW-------------------LLSSIQSDLLLLENQVPFFVLQTLYVGSKI 197

BLAST of MC11g_new0484 vs. NCBI nr
Match: XP_022156848.1 (putative UPF0481 protein At3g02645 [Momordica charantia])

HSP 1 Score: 427 bits (1097), Expect = 2.08e-147
Identity = 212/213 (99.53%), Postives = 212/213 (99.53%), Query Frame = 0

Query: 7   MALPSDSILSTNLEWVVKINELLQRNDFHTAFETPISIFQVPDCIRNDSPEAFTPRRISL 66
           MALPSDSILSTNLEWVVKINELLQRNDFHTAFETPISIFQVPDCIRNDSPEAFTPRRISL
Sbjct: 1   MALPSDSILSTNLEWVVKINELLQRNDFHTAFETPISIFQVPDCIRNDSPEAFTPRRISL 60

Query: 67  GPYHHSQPQLLKLELLKLDTAKKVKDHINLPEFHQLVSDKLNPLELKIRACFGKYFELGC 126
           GPYHHSQPQLLKLELLKLDTAKKVKDHINLPEFHQLVSDKLNPLELKIRACFGKYFELGC
Sbjct: 61  GPYHHSQPQLLKLELLKLDTAKKVKDHINLPEFHQLVSDKLNPLELKIRACFGKYFELGC 120

Query: 127 ESLSWIMLIDSLFLIRLLHIFAEVEVKCYDKRHELPLPELDAEHQQMYLNPKASLVARNE 186
           ESLSWIMLIDSLFLIRLLHIFAEVEVKCYDKRHELPLPELDAEHQQMYLNPKASLVARNE
Sbjct: 121 ESLSWIMLIDSLFLIRLLHIFAEVEVKCYDKRHELPLPELDAEHQQMYLNPKASLVARNE 180

Query: 187 IVGDTLMLENQVPFCVLKEILSGTQIINDLPVL 219
           IVGDTLMLENQVPFCVLKEILSGTQIINDLP L
Sbjct: 181 IVGDTLMLENQVPFCVLKEILSGTQIINDLPAL 213

BLAST of MC11g_new0484 vs. NCBI nr
Match: XP_022156841.1 (putative UPF0481 protein At3g02645 [Momordica charantia])

HSP 1 Score: 357 bits (915), Expect = 2.43e-118
Identity = 176/223 (78.92%), Postives = 195/223 (87.44%), Query Frame = 0

Query: 1   MAETITMALPSDSILSTNLE---WVVKINELLQRNDFHTAFETPISIFQVPDCIRNDSPE 60
           MA+TITM  P+ SIL TNLE   W+V+INEL QRNDFHTAFE+P SIFQVPDCI+ND PE
Sbjct: 1   MAKTITMVSPTYSILCTNLEETQWIVQINELFQRNDFHTAFESPTSIFQVPDCIKNDIPE 60

Query: 61  AFTPRRISLGPYHHSQPQLLKLELLKLDTAKKVKDHINLPEFHQLVSDKLNPLELKIRAC 120
           AFTPRR++LGPYHH QP+LLKLEL KLD A KVKD I LPEFHQLVSDK+ PLELKIRAC
Sbjct: 61  AFTPRRVALGPYHHFQPELLKLELYKLDKATKVKDQIQLPEFHQLVSDKIKPLELKIRAC 120

Query: 121 FGKYFELGCESLSWIMLIDSLFLIRLLHIFAEVEVKCYDKRHELPLPELDAEHQQMYLNP 180
           F KY E+GCE+L+WIMLID LFLI LLHIFAEV+V C  KRHELPLPELDAEHQ+MYLNP
Sbjct: 121 FDKYLEVGCEALAWIMLIDGLFLIHLLHIFAEVKVDCDSKRHELPLPELDAEHQKMYLNP 180

Query: 181 KASLVARNEIVGDTLMLENQVPFCVLKEILSGTQIINDLPVLL 220
           KA+ VARNEIV DTLMLENQ+PFCVLKEIL+GTQI NDLP+ L
Sbjct: 181 KANSVARNEIVSDTLMLENQIPFCVLKEILAGTQIANDLPLFL 223

BLAST of MC11g_new0484 vs. NCBI nr
Match: XP_022156851.1 (putative UPF0481 protein At3g02645 [Momordica charantia])

HSP 1 Score: 347 bits (890), Expect = 6.26e-115
Identity = 176/223 (78.92%), Postives = 195/223 (87.44%), Query Frame = 0

Query: 1   MAETITMALPSDSILSTNLE---WVVKINELLQRNDFHTAFETPISIFQVPDCIRNDSPE 60
           MAETITMA PS SIL TNLE   WV++I+ELLQRNDFHTAFE+PISIFQVPD IRNDSPE
Sbjct: 1   MAETITMASPSYSILRTNLEETQWVLQISELLQRNDFHTAFESPISIFQVPDSIRNDSPE 60

Query: 61  AFTPRRISLGPYHHSQPQLLKLELLKLDTAKKVKDHINLPEFHQLVSDKLNPLELKIRAC 120
           AFTPRR++LGPYHH + +LL LEL KL  AKKVKD I L EFH+LVSDKL PLELKIRAC
Sbjct: 61  AFTPRRVALGPYHHFRSELLNLELYKLSRAKKVKDQIELAEFHKLVSDKLKPLELKIRAC 120

Query: 121 FGKYFELGCESLSWIMLIDSLFLIRLLHIFAEVEVKCYDKRHELPLPELDAEHQQMYLNP 180
           F KY E+GCE+L+WIMLID LFLI  L IFAEVEV+C  +RHELPLPELD+EHQQMYLNP
Sbjct: 121 FDKYLEVGCEALAWIMLIDGLFLIHSLRIFAEVEVECSLQRHELPLPELDSEHQQMYLNP 180

Query: 181 KASLVARNEIVGDTLMLENQVPFCVLKEILSGTQIINDLPVLL 220
           KA+ +ARNEIV DTLMLENQ+PFCVLKEIL+GT IINDLPVLL
Sbjct: 181 KANSMARNEIVSDTLMLENQIPFCVLKEILAGTHIINDLPVLL 223

BLAST of MC11g_new0484 vs. NCBI nr
Match: XP_022156849.1 (putative UPF0481 protein At3g02645 [Momordica charantia])

HSP 1 Score: 348 bits (892), Expect = 1.31e-114
Identity = 176/223 (78.92%), Postives = 195/223 (87.44%), Query Frame = 0

Query: 1   MAETITMALPSDSILSTNLE---WVVKINELLQRNDFHTAFETPISIFQVPDCIRNDSPE 60
           MAE ITMA  S SILSTNLE   WV++I+ELLQRN+FHTAFE+PISIFQVPD IRNDSPE
Sbjct: 1   MAEKITMASSSYSILSTNLEETQWVLQISELLQRNEFHTAFESPISIFQVPDSIRNDSPE 60

Query: 61  AFTPRRISLGPYHHSQPQLLKLELLKLDTAKKVKDHINLPEFHQLVSDKLNPLELKIRAC 120
           AFTPR ++LGP+HH  PQLL LEL KL  AKKVKD I L EFHQL+SDKL PLELKIRAC
Sbjct: 61  AFTPRSVALGPFHHFHPQLLNLELYKLGRAKKVKDQIQLAEFHQLISDKLKPLELKIRAC 120

Query: 121 FGKYFELGCESLSWIMLIDSLFLIRLLHIFAEVEVKCYDKRHELPLPELDAEHQQMYLNP 180
           F KY E+GCE+L+WIMLID LFLI LL IFAEVEVKC  +RHELPLPELDAEHQQMYLNP
Sbjct: 121 FKKYLEVGCEALAWIMLIDGLFLIHLLQIFAEVEVKCSLQRHELPLPELDAEHQQMYLNP 180

Query: 181 KASLVARNEIVGDTLMLENQVPFCVLKEILSGTQIINDLPVLL 220
           KA+ +ARNEIV DTLMLENQ+PFCVLKEIL+GTQI+NDLP+LL
Sbjct: 181 KANSMARNEIVSDTLMLENQIPFCVLKEILAGTQIVNDLPLLL 223

BLAST of MC11g_new0484 vs. NCBI nr
Match: XP_022156845.1 (putative UPF0481 protein At3g02645 [Momordica charantia])

HSP 1 Score: 303 bits (777), Expect = 9.67e-98
Identity = 153/200 (76.50%), Postives = 171/200 (85.50%), Query Frame = 0

Query: 19  LEWVVKINELLQRNDFHTAFETPISIFQVPDCIRNDSPEAFTPRRISLGPYHHSQPQLLK 78
           ++WVV+INELLQRNDFHTAFETP SIFQVPDCIRNDSPEAFTPRRISLGPYHH +P+LLK
Sbjct: 1   MQWVVQINELLQRNDFHTAFETPTSIFQVPDCIRNDSPEAFTPRRISLGPYHHFRPELLK 60

Query: 79  LELLKLDTAKKVKDHINLPEFHQLVSDKLNPLELKIRACFGKYFELGCESLSWIMLIDSL 138
           LEL KL  AKKVK  I LPEFHQLVSD L PLEL+IRACF KY E+GCESLSW+MLID+L
Sbjct: 61  LELYKLLVAKKVKHQIQLPEFHQLVSDTLKPLELQIRACFDKYLEVGCESLSWMMLIDAL 120

Query: 139 FLIRLLHIFAEVEVKCYDKRHELPLPELDAEHQQMYLNPKASLVARNEIVGDTLMLENQV 198
           FLIRLLHIFAEVEVK  D   +L  PELD EHQQ+YLN +AS + R+EI+ D LM+ENQ+
Sbjct: 121 FLIRLLHIFAEVEVK-RDLNSKLSWPELDVEHQQLYLNHEASSMGRDEIICDALMVENQI 180

Query: 199 PFCVLKEILSGTQIINDLPV 218
           PF VLK IL G +IINDLPV
Sbjct: 181 PFRVLKGILVGNEIINDLPV 199

BLAST of MC11g_new0484 vs. ExPASy TrEMBL
Match: A0A6J1DRQ6 (putative UPF0481 protein At3g02645 OS=Momordica charantia OX=3673 GN=LOC111023685 PE=4 SV=1)

HSP 1 Score: 427 bits (1097), Expect = 1.01e-147
Identity = 212/213 (99.53%), Postives = 212/213 (99.53%), Query Frame = 0

Query: 7   MALPSDSILSTNLEWVVKINELLQRNDFHTAFETPISIFQVPDCIRNDSPEAFTPRRISL 66
           MALPSDSILSTNLEWVVKINELLQRNDFHTAFETPISIFQVPDCIRNDSPEAFTPRRISL
Sbjct: 1   MALPSDSILSTNLEWVVKINELLQRNDFHTAFETPISIFQVPDCIRNDSPEAFTPRRISL 60

Query: 67  GPYHHSQPQLLKLELLKLDTAKKVKDHINLPEFHQLVSDKLNPLELKIRACFGKYFELGC 126
           GPYHHSQPQLLKLELLKLDTAKKVKDHINLPEFHQLVSDKLNPLELKIRACFGKYFELGC
Sbjct: 61  GPYHHSQPQLLKLELLKLDTAKKVKDHINLPEFHQLVSDKLNPLELKIRACFGKYFELGC 120

Query: 127 ESLSWIMLIDSLFLIRLLHIFAEVEVKCYDKRHELPLPELDAEHQQMYLNPKASLVARNE 186
           ESLSWIMLIDSLFLIRLLHIFAEVEVKCYDKRHELPLPELDAEHQQMYLNPKASLVARNE
Sbjct: 121 ESLSWIMLIDSLFLIRLLHIFAEVEVKCYDKRHELPLPELDAEHQQMYLNPKASLVARNE 180

Query: 187 IVGDTLMLENQVPFCVLKEILSGTQIINDLPVL 219
           IVGDTLMLENQVPFCVLKEILSGTQIINDLP L
Sbjct: 181 IVGDTLMLENQVPFCVLKEILSGTQIINDLPAL 213

BLAST of MC11g_new0484 vs. ExPASy TrEMBL
Match: A0A6J1DW70 (putative UPF0481 protein At3g02645 OS=Momordica charantia OX=3673 GN=LOC111023674 PE=4 SV=1)

HSP 1 Score: 357 bits (915), Expect = 1.18e-118
Identity = 176/223 (78.92%), Postives = 195/223 (87.44%), Query Frame = 0

Query: 1   MAETITMALPSDSILSTNLE---WVVKINELLQRNDFHTAFETPISIFQVPDCIRNDSPE 60
           MA+TITM  P+ SIL TNLE   W+V+INEL QRNDFHTAFE+P SIFQVPDCI+ND PE
Sbjct: 1   MAKTITMVSPTYSILCTNLEETQWIVQINELFQRNDFHTAFESPTSIFQVPDCIKNDIPE 60

Query: 61  AFTPRRISLGPYHHSQPQLLKLELLKLDTAKKVKDHINLPEFHQLVSDKLNPLELKIRAC 120
           AFTPRR++LGPYHH QP+LLKLEL KLD A KVKD I LPEFHQLVSDK+ PLELKIRAC
Sbjct: 61  AFTPRRVALGPYHHFQPELLKLELYKLDKATKVKDQIQLPEFHQLVSDKIKPLELKIRAC 120

Query: 121 FGKYFELGCESLSWIMLIDSLFLIRLLHIFAEVEVKCYDKRHELPLPELDAEHQQMYLNP 180
           F KY E+GCE+L+WIMLID LFLI LLHIFAEV+V C  KRHELPLPELDAEHQ+MYLNP
Sbjct: 121 FDKYLEVGCEALAWIMLIDGLFLIHLLHIFAEVKVDCDSKRHELPLPELDAEHQKMYLNP 180

Query: 181 KASLVARNEIVGDTLMLENQVPFCVLKEILSGTQIINDLPVLL 220
           KA+ VARNEIV DTLMLENQ+PFCVLKEIL+GTQI NDLP+ L
Sbjct: 181 KANSVARNEIVSDTLMLENQIPFCVLKEILAGTQIANDLPLFL 223

BLAST of MC11g_new0484 vs. ExPASy TrEMBL
Match: A0A6J1DW80 (putative UPF0481 protein At3g02645 OS=Momordica charantia OX=3673 GN=LOC111023687 PE=4 SV=1)

HSP 1 Score: 347 bits (890), Expect = 3.03e-115
Identity = 176/223 (78.92%), Postives = 195/223 (87.44%), Query Frame = 0

Query: 1   MAETITMALPSDSILSTNLE---WVVKINELLQRNDFHTAFETPISIFQVPDCIRNDSPE 60
           MAETITMA PS SIL TNLE   WV++I+ELLQRNDFHTAFE+PISIFQVPD IRNDSPE
Sbjct: 1   MAETITMASPSYSILRTNLEETQWVLQISELLQRNDFHTAFESPISIFQVPDSIRNDSPE 60

Query: 61  AFTPRRISLGPYHHSQPQLLKLELLKLDTAKKVKDHINLPEFHQLVSDKLNPLELKIRAC 120
           AFTPRR++LGPYHH + +LL LEL KL  AKKVKD I L EFH+LVSDKL PLELKIRAC
Sbjct: 61  AFTPRRVALGPYHHFRSELLNLELYKLSRAKKVKDQIELAEFHKLVSDKLKPLELKIRAC 120

Query: 121 FGKYFELGCESLSWIMLIDSLFLIRLLHIFAEVEVKCYDKRHELPLPELDAEHQQMYLNP 180
           F KY E+GCE+L+WIMLID LFLI  L IFAEVEV+C  +RHELPLPELD+EHQQMYLNP
Sbjct: 121 FDKYLEVGCEALAWIMLIDGLFLIHSLRIFAEVEVECSLQRHELPLPELDSEHQQMYLNP 180

Query: 181 KASLVARNEIVGDTLMLENQVPFCVLKEILSGTQIINDLPVLL 220
           KA+ +ARNEIV DTLMLENQ+PFCVLKEIL+GT IINDLPVLL
Sbjct: 181 KANSMARNEIVSDTLMLENQIPFCVLKEILAGTHIINDLPVLL 223

BLAST of MC11g_new0484 vs. ExPASy TrEMBL
Match: A0A6J1DUT7 (putative UPF0481 protein At3g02645 OS=Momordica charantia OX=3673 GN=LOC111023686 PE=4 SV=1)

HSP 1 Score: 348 bits (892), Expect = 6.33e-115
Identity = 176/223 (78.92%), Postives = 195/223 (87.44%), Query Frame = 0

Query: 1   MAETITMALPSDSILSTNLE---WVVKINELLQRNDFHTAFETPISIFQVPDCIRNDSPE 60
           MAE ITMA  S SILSTNLE   WV++I+ELLQRN+FHTAFE+PISIFQVPD IRNDSPE
Sbjct: 1   MAEKITMASSSYSILSTNLEETQWVLQISELLQRNEFHTAFESPISIFQVPDSIRNDSPE 60

Query: 61  AFTPRRISLGPYHHSQPQLLKLELLKLDTAKKVKDHINLPEFHQLVSDKLNPLELKIRAC 120
           AFTPR ++LGP+HH  PQLL LEL KL  AKKVKD I L EFHQL+SDKL PLELKIRAC
Sbjct: 61  AFTPRSVALGPFHHFHPQLLNLELYKLGRAKKVKDQIQLAEFHQLISDKLKPLELKIRAC 120

Query: 121 FGKYFELGCESLSWIMLIDSLFLIRLLHIFAEVEVKCYDKRHELPLPELDAEHQQMYLNP 180
           F KY E+GCE+L+WIMLID LFLI LL IFAEVEVKC  +RHELPLPELDAEHQQMYLNP
Sbjct: 121 FKKYLEVGCEALAWIMLIDGLFLIHLLQIFAEVEVKCSLQRHELPLPELDAEHQQMYLNP 180

Query: 181 KASLVARNEIVGDTLMLENQVPFCVLKEILSGTQIINDLPVLL 220
           KA+ +ARNEIV DTLMLENQ+PFCVLKEIL+GTQI+NDLP+LL
Sbjct: 181 KANSMARNEIVSDTLMLENQIPFCVLKEILAGTQIVNDLPLLL 223

BLAST of MC11g_new0484 vs. ExPASy TrEMBL
Match: A0A6J1DRH1 (putative UPF0481 protein At3g02645 OS=Momordica charantia OX=3673 GN=LOC111023679 PE=4 SV=1)

HSP 1 Score: 303 bits (777), Expect = 4.68e-98
Identity = 153/200 (76.50%), Postives = 171/200 (85.50%), Query Frame = 0

Query: 19  LEWVVKINELLQRNDFHTAFETPISIFQVPDCIRNDSPEAFTPRRISLGPYHHSQPQLLK 78
           ++WVV+INELLQRNDFHTAFETP SIFQVPDCIRNDSPEAFTPRRISLGPYHH +P+LLK
Sbjct: 1   MQWVVQINELLQRNDFHTAFETPTSIFQVPDCIRNDSPEAFTPRRISLGPYHHFRPELLK 60

Query: 79  LELLKLDTAKKVKDHINLPEFHQLVSDKLNPLELKIRACFGKYFELGCESLSWIMLIDSL 138
           LEL KL  AKKVK  I LPEFHQLVSD L PLEL+IRACF KY E+GCESLSW+MLID+L
Sbjct: 61  LELYKLLVAKKVKHQIQLPEFHQLVSDTLKPLELQIRACFDKYLEVGCESLSWMMLIDAL 120

Query: 139 FLIRLLHIFAEVEVKCYDKRHELPLPELDAEHQQMYLNPKASLVARNEIVGDTLMLENQV 198
           FLIRLLHIFAEVEVK  D   +L  PELD EHQQ+YLN +AS + R+EI+ D LM+ENQ+
Sbjct: 121 FLIRLLHIFAEVEVK-RDLNSKLSWPELDVEHQQLYLNHEASSMGRDEIICDALMVENQI 180

Query: 199 PFCVLKEILSGTQIINDLPV 218
           PF VLK IL G +IINDLPV
Sbjct: 181 PFRVLKGILVGNEIINDLPV 199

BLAST of MC11g_new0484 vs. TAIR 10
Match: AT3G02645.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 121.3 bits (303), Expect = 9.6e-28
Identity = 68/188 (36.17%), Postives = 103/188 (54.79%), Query Frame = 0

Query: 21  WVVKINELLQRN-DFHTAFETPISIFQVPDCIRNDSPEAFTPRRISLGPYHHSQPQLLKL 80
           WV+ + + L    + H   E  +SIF VP  +    P+++TP R+S+GPYH  +P+L ++
Sbjct: 21  WVINVQKSLDAELEEHDLEEVTVSIFNVPKALMCSHPDSYTPHRVSIGPYHCLKPELHEM 80

Query: 81  ELLKLDTAKKVKDHINLPEFHQLVSDKLNPLELKIRACFGKYFELGCESLSWIMLIDSLF 140
           E  KL  A+K+++  N   FH LV +KL  +E+KIRAC+ KY     E+L WIM +DS F
Sbjct: 81  ERYKLMIARKIRNQYNSFRFHDLV-EKLQSMEIKIRACYHKYIGFNGETLLWIMAVDSSF 140

Query: 141 LIRLLHIFAEVEVKCYDKRHELPLPELDAEHQQMYLNPKASLVARNEIVGDTLMLENQVP 200
           LI  L I++  +V+    R                       V  NEI+ D +M+ENQ+P
Sbjct: 141 LIEFLKIYSFRKVETLINR-----------------------VGHNEILRDIMMIENQIP 184

Query: 201 FCVLKEIL 208
             VL++ L
Sbjct: 201 LFVLRKTL 184

BLAST of MC11g_new0484 vs. TAIR 10
Match: AT3G50130.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-10
Identity = 47/194 (24.23%), Postives = 90/194 (46.39%), Query Frame = 0

Query: 17  TNLEWVVKINELLQ---RNDFHTAFETPISIFQVPDCIRNDSPEAFTPRRISLGPYHHSQ 76
           T  EWV+ I + ++   R D  T+++  + I++VP  ++ ++ +++ P+ +SLGP+HH  
Sbjct: 112 TREEWVISIRDKMEQALREDATTSWD-KLCIYRVPQYLQENNKKSYFPQTVSLGPFHHGN 171

Query: 77  PQLLKLELLKLDTAKKVKDHINLPEFHQLVSDKLNPLELKIRACFGKYFELGCESLSWIM 136
             LL ++  K      V          ++  D +  LE + RAC+    +L     S ++
Sbjct: 172 KHLLPMDRHKWRAVNMVM--ARTKHDIEMYIDAMKELEDRARACYEGPIDLSSNKFSEML 231

Query: 137 LIDSLFLIRLLHIFAEVEVKCYDKRHELPLPELDAEHQQMYLNPKASLVARNEIVGDTLM 196
           ++D  F++ L             +  +    EL  +        + S+   + I  D +M
Sbjct: 232 VLDGCFVLELF------------RGADEGFSELGYDRNDPVFAMRGSM---HSIQRDMVM 287

Query: 197 LENQVPFCVLKEIL 208
           LENQ+P  VL  +L
Sbjct: 292 LENQLPLFVLNRLL 287

BLAST of MC11g_new0484 vs. TAIR 10
Match: AT3G50140.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 62.0 bits (149), Expect = 6.9e-10
Identity = 52/201 (25.87%), Postives = 86/201 (42.79%), Query Frame = 0

Query: 17  TNLEWVVKINELLQR--NDFHTAFETPISIFQVPDCIRNDSPEAFTPRRISLGPYHHSQP 76
           T  EWV+ I + +++   D  T     I I++VP  ++     ++ P+ +SLGPYHH   
Sbjct: 86  TREEWVIWIKDKMEQVMRDAATTSWDKICIYRVPLSLKKSDKNSYFPQAVSLGPYHHGDE 145

Query: 77  QLLKLELLKLDTAKKVKDHINLPEFHQLVSDKLNPLELKIRACFGKYFELGCESLSWIML 136
            L  ++  K      V       +  ++  D +  LE + RAC+     L     + +++
Sbjct: 146 HLRPMDYHKWRAVNMVMKRTK--QGIEMYIDAMKELEERARACYEGPIGLSSNKFTQMLV 205

Query: 137 IDSLFLIRLLHIFAEVEVKC-YDKRHELPLPELDAEHQQMYLNPKASLVARNEIVGDTLM 196
           +D  F++ L     E   K  YD+   +                 A   + + I  D LM
Sbjct: 206 LDGCFVLDLFRGAYEGFSKLGYDRNDPV----------------FAMRGSMHSIRRDMLM 265

Query: 197 LENQVPFCVLKEILS---GTQ 212
           LENQ+P  VL  +L    GTQ
Sbjct: 266 LENQLPLFVLNRLLELQLGTQ 268

BLAST of MC11g_new0484 vs. TAIR 10
Match: AT4G31980.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). )

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09
Identity = 44/176 (25.00%), Postives = 84/176 (47.73%), Query Frame = 0

Query: 34  FHTAFETPISIFQVPDCIRNDSPEAFTPRRISLGPYHHSQPQLLKLELLKLDTAKKVKDH 93
           F ++  T   I++VP+ +R  +P+A+TPR +S GP H  + +L  +E  K          
Sbjct: 285 FLSSLSTKCCIYKVPNKLRRLNPDAYTPRLVSFGPLHRGKEELQAMEDQKYRYLLSF--- 344

Query: 94  INLPEFHQLVSDKL---NPLELKIRACFGKYFELGCESLSWIMLIDSLFLIRLLHIFAEV 153
             +P  +  + D +      E   R+C+ +  +L  +    ++++D  FL+ LL      
Sbjct: 345 --IPRTNSSLEDLVRLARTWEQNARSCYAEDVKLHSDEFVEMLVVDGSFLVELLL----- 404

Query: 154 EVKCYDKRHELPLPELDAEHQQMYLNPKASLVARNEIVGDTLMLENQVPFCVLKEI 207
                 + H    P L  E+ +++ N     +   ++  D +++ENQ+PF V+KEI
Sbjct: 405 ------RSH---YPRLRGENDRIFGNS----MMITDVCRDMILIENQLPFFVVKEI 437

BLAST of MC11g_new0484 vs. TAIR 10
Match: AT3G47250.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 59.7 bits (143), Expect = 3.4e-09
Identity = 47/174 (27.01%), Postives = 83/174 (47.70%), Query Frame = 0

Query: 44  IFQVPDCIRNDSPEAFTPRRISLGPYHHSQPQLL-----KLELLKLDTAKKVKDHINLPE 103
           IF++PD +   +P+A+ P+ +S+GPYH+ +  L      K   L+L   +  K  ++   
Sbjct: 63  IFRIPDSLAEVNPKAYKPKVVSIGPYHYGENHLQMIQQHKFRFLELFVDRATKKGMD--- 122

Query: 104 FHQLVSDKLNPLELKIRACFGKYFELGCESLSWIMLIDSLFLIRLLHIFAEVEVKCYDKR 163
              ++   +  L+ KIRA + +   +    L  +M++D  F++ LL I +          
Sbjct: 123 -ENVLYAAVGALQHKIRASYSEELRIEKSELVSMMILDGCFILMLLLIVSR--------- 182

Query: 164 HELPLPELDAEHQQMYLNPKASLVARNEIVGDTLMLENQVPFCVLKEILSGTQI 213
                 +LD     ++  P   ++A   I  D L+LENQVPF VL+ I   + I
Sbjct: 183 ----KIDLDMNKDPIFTIP--WILA--SIQSDLLLLENQVPFFVLRTIFDKSGI 215

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P0C8971.3e-2636.17Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana OX=3702 GN=At3g02645 ... [more]
Q9SD537.0e-0728.98UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
XP_022156848.12.08e-14799.53putative UPF0481 protein At3g02645 [Momordica charantia][more]
XP_022156841.12.43e-11878.92putative UPF0481 protein At3g02645 [Momordica charantia][more]
XP_022156851.16.26e-11578.92putative UPF0481 protein At3g02645 [Momordica charantia][more]
XP_022156849.11.31e-11478.92putative UPF0481 protein At3g02645 [Momordica charantia][more]
XP_022156845.19.67e-9876.50putative UPF0481 protein At3g02645 [Momordica charantia][more]
Match NameE-valueIdentityDescription
A0A6J1DRQ61.01e-14799.53putative UPF0481 protein At3g02645 OS=Momordica charantia OX=3673 GN=LOC11102368... [more]
A0A6J1DW701.18e-11878.92putative UPF0481 protein At3g02645 OS=Momordica charantia OX=3673 GN=LOC11102367... [more]
A0A6J1DW803.03e-11578.92putative UPF0481 protein At3g02645 OS=Momordica charantia OX=3673 GN=LOC11102368... [more]
A0A6J1DUT76.33e-11578.92putative UPF0481 protein At3g02645 OS=Momordica charantia OX=3673 GN=LOC11102368... [more]
A0A6J1DRH14.68e-9876.50putative UPF0481 protein At3g02645 OS=Momordica charantia OX=3673 GN=LOC11102367... [more]
Match NameE-valueIdentityDescription
AT3G02645.19.6e-2836.17Plant protein of unknown function (DUF247) [more]
AT3G50130.11.1e-1024.23Plant protein of unknown function (DUF247) [more]
AT3G50140.16.9e-1025.87Plant protein of unknown function (DUF247) [more]
AT4G31980.12.0e-0925.00unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247,... [more]
AT3G47250.13.4e-0927.01Plant protein of unknown function (DUF247) [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 219..220
NoneNo IPR availablePANTHERPTHR31549:SF183SUBFAMILY NOT NAMEDcoord: 17..208
IPR004158Protein of unknown function DUF247, plantPFAMPF03140DUF247coord: 44..208
e-value: 1.1E-30
score: 107.2
IPR004158Protein of unknown function DUF247, plantPANTHERPTHR31549PROTEIN, PUTATIVE (DUF247)-RELATED-RELATEDcoord: 17..208

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC11g_new0484.1MC11g_new0484.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane