MC11g_new0467 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g_new0467
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC11: 18582057 .. 18584617 (+)
RNA-Seq Expression	MC11g_new0467
Synteny	MC11g_new0467

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATCATCATGAGGCGATAAAGTTCCCATTTCCAAATACTCAAGTTTTGGAGCTAAGATCTCTGTCTGTTCCATCTCGGACGTTTCCTGGCCCAACGAAAATTTCCACTCCATCTCGAACGTTTCCTTTGTCCTAAAACCCTAAACCCCATCCCAGATTGAACGTTATCTCGGACGTTGGACGATTCATCCATCCCGAACCTTACGCTTCCAAGACTTTCTCTTCCATTGTTTCGTCCTACGAAGTCATCGATCGCAAGGTTAGTGGTCGGGTAGATTATAACAAAATTTTTAGTAACATTTGTTGTTCTGATATCATTATCGGCGCTATTTGAAGCAGCCATGTAGAACTAGGGTTATTTTCATGTTGTGCTTGCAGAACTAAGAAATTTGGGGAAAAAATCAATCTCTGATTCAATCCCGTATTCAATCCCGGATGATTTTGGTCCAGGATAGAGTACGGGATTGAATCCGGGATCGAATTCGAAGGGTCTGCATTCTGCCTTCCATCCCAGACCTTATCCCGGACCATTTCGCCTCCGGGATAAGGTCCGGGATGGAAGGCAGAATGCAGACCCTTCGAATTTTTTTCTTTTTTAAGTTGGTTTGCACTAAACGTTTTTTTTTAATTTCCTTGCATTAGTCTTTATCTAATTTTTTTTTTTTTTTTACCTTTGTATAAGCCATATAATGGATTTGAGACTAATTCTAAACCGTGATGACTGGTTTCCGGTCACGTTGACTAACATTGTCCATATAGATAAAACCACTTCTAGGCTGAAGGGTAGGTTAACCCCAACCCAATTAGACATGTTTAGGCAAACCTGTTTCGGTCCCATTTTGGACATGGACGTAGTTTTTAACGGTCCATTAATACATTATCTATTGTTGAGAGAGGTTGAAGAGCCTAGGCAGGACATCATTAGTTTCGACCTGTTTGGGAAAAGGGTCTCCTTGGGTAAGCGGGAGTTTGACCTAATGACCGGCCTCAGTCATAGGATGATTAGGGTAGATAACGATATTCCTGGCAGACGACTTCGAGCCGTTACTTTAAGGATAGTGTCAGGGTTAAGTGTAGTGAGTTAGAGAAGATTTTTATGGAGGCAGTTTTTGACGACGATGAGGATACTGTCAAGGTTGGCATAGTTTACTTCGTTGAGCTTGCCATGATGGGGAAGGAGAGGAAGCAGTTTATAGATACGACCCTTTTAGGGGTTGTGGATAGGTGGGAGCTGTTCTGCAATCATGACTAGAGTTCGTTGATTTTCGAAAGAACACTTTGGAGCCTGAAGAATGCCCTGAAGGATAAACTGCCGGAGTACCAACAGAAGGCGAGAAATGACCCCACACACCAAGAGACGTATAGTCTCTACGGGTTTCCGTACGCATTTCAGGTTAGCGAGCTTTAAGTCAACTATATAATCGAATATATTATTTAAATGCATTATTTATTTGACTTCACTGGATTCTAGGTATGGGCTTACGAGACGATATCGACGTTGAGTCTGTGCGTAGCCACGAGGCTCAGCGACGACGCCATTCCTCGACTCCTTAGGTGGTCATGCACTTATGCTCGTGGGTTTCTTACTCTGCAGAGAGACGTGTTCGATAACACGATGGTAAGTAATTATCTTGTGGTCGTGCGATTCAAATTTAATTTTTCATTTGTGTCTAATCATAAGTTTTTTGCAGTCCAAGGTTAAGGAATACTTGGTTTCGACGAATGTTGAGGCAGAACACATGGTCTGTATCATGTGTCCACCGGAAGCCCGCGCTATACCTGTCCCGCCGGCTGTACCTGACCCGCCTGCAGTACCTGACCCAGCTGTTGTACTTGCCCCGGCTGCAGTACGTAACCCGGCTGCAGTAGCTAACCAGGCTGCAGATCTGGAAAAGGGGTACTCAGGAAAGAAGGGTGAAGGACCAAGGAAAGAATATCATAGAGGACCCGGTAGAAGAGGCCGAGATATTGGACGATGATGCATTACAAGGTCCTATATTAGACGATGCTGGACCCAGTGGAAATGACGGCGAAGCGCTACAGAAGAGGTCGAAACGGAAAAAATTAAAAAATAAGATCAGTAGACGGTTGAAGAGGCTCGATGACCGAGTTGGTGCTATCGAGGCCACACTGACTGGCTTCGAGGCCACACTGACTGGCTTCGGGGTCGCCCTGAAAGGTATCCAGAGATACCTGAAGAAACTGTCGAAGGTACGCATTTTATATGTATATAACATTAGGTATGCTTAGTTATTAATTATGATTAGTTGGGTCCGAGATAACGCTTATTGGTCCGTACTTTTCGTGCAGGGTAAATTCCCTGATCCGACCAAATATTTTGGACGTGGGGGTGGGCCCGATGATGATGATCCATCGGATCAAAGGCCTGATGAGGCCCCAATGCCAGATGGAGGTCCGAAGAGTATGGATGAGGACCGGAGGCCGGAAGAGGTCCCTAAGACTGACGAGTATCGGACCATGGAGCATGTCCGAAGATTATGGACGATAATTCGAAGAATATGGACGAGGATCCGAAGAATATGGACGAGGATCCGATGA

mRNA sequence

ATGTATCATCATGAGGCGATAAAGTTCCCATTTCCAAATACTCAAGTTTTGGAGCTAAGATCTCTATTGAACGTTATCTCGGACGTTGGACGATTCATCCATCCCGAACCTTACGCTTCCAAGACTTTCTCTTCCATTGTTTCGTCCTACGAAGTCATCGATCGCAAGGAAAGAAGGGTGAAGGACCAAGGAAAGAATATCATAGAGGACCCGGTAGAAGAGGCCGAGATATTGGACGATGATGCATTACAAGGTCCTATATTAGACGATGCTGGACCCAGTGGAAATGACGGCGAAGCGCTACAGAAGAGGTCGAAACGGAAAAAATTAAAAAATAAGATCAGTAGACGGTTGAAGAGGCTCGATGACCGAGTTGGTGCTATCGAGGCCACACTGACTGGCTTCGAGGCCACACTGACTGGCTTCGGGGTCGCCCTGAAAGGTATCCAGAGATACCTGAAGAAACTGTCGAAGGGTAAATTCCCTGATCCGACCAAATATTTTGGACGTGGGGGTGGGCCCGATGATGATGATCCATCGGATCAAAGGCCTGATGAGGCCCCAATGCCAGATGGAGGTCCGAAGAGTATGGATGAGGACCGGAGGCCGGAAGAGGTCCCTAAGACTGACGAGTATCGGACCATGGAGCATGTCCGAAGATTATGGACGATAATTCGAAGAATATGGACGAGGATCCGAAGAATATGGACGAGGATCCGATGA

Coding sequence (CDS)

ATGTATCATCATGAGGCGATAAAGTTCCCATTTCCAAATACTCAAGTTTTGGAGCTAAGATCTCTATTGAACGTTATCTCGGACGTTGGACGATTCATCCATCCCGAACCTTACGCTTCCAAGACTTTCTCTTCCATTGTTTCGTCCTACGAAGTCATCGATCGCAAGGAAAGAAGGGTGAAGGACCAAGGAAAGAATATCATAGAGGACCCGGTAGAAGAGGCCGAGATATTGGACGATGATGCATTACAAGGTCCTATATTAGACGATGCTGGACCCAGTGGAAATGACGGCGAAGCGCTACAGAAGAGGTCGAAACGGAAAAAATTAAAAAATAAGATCAGTAGACGGTTGAAGAGGCTCGATGACCGAGTTGGTGCTATCGAGGCCACACTGACTGGCTTCGAGGCCACACTGACTGGCTTCGGGGTCGCCCTGAAAGGTATCCAGAGATACCTGAAGAAACTGTCGAAGGGTAAATTCCCTGATCCGACCAAATATTTTGGACGTGGGGGTGGGCCCGATGATGATGATCCATCGGATCAAAGGCCTGATGAGGCCCCAATGCCAGATGGAGGTCCGAAGAGTATGGATGAGGACCGGAGGCCGGAAGAGGTCCCTAAGACTGACGAGTATCGGACCATGGAGCATGTCCGAAGATTATGGACGATAATTCGAAGAATATGGACGAGGATCCGAAGAATATGGACGAGGATCCGATGA

Protein sequence

MYHHEAIKFPFPNTQVLELRSLLNVISDVGRFIHPEPYASKTFSSIVSSYEVIDRKERRVKDQGKNIIEDPVEEAEILDDDALQGPILDDAGPSGNDGEALQKRSKRKKLKNKISRRLKRLDDRVGAIEATLTGFEATLTGFGVALKGIQRYLKKLSKGKFPDPTKYFGRGGGPDDDDPSDQRPDEAPMPDGGPKSMDEDRRPEEVPKTDEYRTMEHVRRLWTIIRRIWTRIRRIWTRIR

Homology

[Close]

BLAST of MC11g_new0467 vs. NCBI nr
Match: XP_022153201.1 (uncharacterized protein LOC111020757 [Momordica charantia])

HSP 1 Score: 156 bits (394), Expect = 1.14e-40
Identity = 89/146 (60.96%), Postives = 106/146 (72.60%), Query Frame = 0


Query: 68  IEDPVEEAEI--LDDDALQGPILDDAGPSGNDGEALQKRSKRKKLKNKISRRLKRLDDRV 127
           + DP  + E+  L+D  +    +D+A PS NDGE L+KR K+ K K +ISRRLKRLD+ V
Sbjct: 329 VPDPPADVEMGPLEDPVVDAHAVDEARPSANDGEGLEKRLKKNKFKKRISRRLKRLDNCV 388

Query: 128 GAIEATLTGFEATLTGFGVALKGIQRYLKKLSKGKFPDPTKYFGRGGGPDDDDPSDQRPD 187
           GAIE  L  F       GVALKGIQ YLKKL+KGKFPD +KYFG GGGPDDD PSDQRPD
Sbjct: 389 GAIEDKLGDF-------GVALKGIQIYLKKLAKGKFPDSSKYFGGGGGPDDDGPSDQRPD 448

Query: 188 EAPMPDGGPKSMDEDRRPEEVPKTDE 211
           E+P PDGG KSMDED+R +E  +TDE
Sbjct: 449 ESPKPDGGRKSMDEDQRSDEDQRTDE 467

[Close]

BLAST of MC11g_new0467 vs. NCBI nr
Match: XP_022155163.1 (uncharacterized protein LOC111022304 [Momordica charantia])

HSP 1 Score: 70.5 bits (171), Expect = 3.63e-11
Identity = 38/62 (61.29%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 35  PEPYASKTFSSIVSSYEVIDR--KERRVKDQGKNIIEDPVEEAEILDDDALQGPILDDAG 94
           P P A    +++      ++R  +ERRVKD+GKNIIEDPVEEAE LDDDALQ P LDDAG
Sbjct: 88  PAPAAVPNSAAVADLPADLERGTQERRVKDKGKNIIEDPVEEAETLDDDALQSPALDDAG 147

[Close]

BLAST of MC11g_new0467 vs. NCBI nr
Match: XP_022154965.1 (uncharacterized protein LOC111022110 [Momordica charantia])

HSP 1 Score: 58.2 bits (139), Expect = 8.57e-06
Identity = 52/123 (42.28%), Postives = 64/123 (52.03%), Query Frame = 0


Query: 106 KRKKLKNKISRRLKRLDDRVGAIEATLTGFEATLTGFGVALKGIQRYLKKLSKGKFPDPT 165
           K+KK K+K SR L+RL DRV AIE TLTG    +       K I++++K+L+K       
Sbjct: 224 KKKKSKHKWSRELRRLGDRVTAIETTLTGMTTDI-------KDIKKFMKRLTKVMSKGQN 283

Query: 166 KYFGRGGGPDDD------DPS-----DQRPDEAPMPDGGPKSMDEDRRPEEVPKTDEYRT 217
           KY  RGG PD D      DPS     D   DE P     PK+ DE R  E+ PKT E  T
Sbjct: 284 KYDRRGGVPDQDGSSGGRDPSGRNEEDMDMDEDPKTGKEPKTGDEPRMDED-PKTCEEPT 338

[Close]

BLAST of MC11g_new0467 vs. ExPASy TrEMBL
Match: A0A6J1DJX9 (uncharacterized protein LOC111020757 OS=Momordica charantia OX=3673 GN=LOC111020757 PE=4 SV=1)

HSP 1 Score: 156 bits (394), Expect = 5.51e-41
Identity = 89/146 (60.96%), Postives = 106/146 (72.60%), Query Frame = 0


Query: 68  IEDPVEEAEI--LDDDALQGPILDDAGPSGNDGEALQKRSKRKKLKNKISRRLKRLDDRV 127
           + DP  + E+  L+D  +    +D+A PS NDGE L+KR K+ K K +ISRRLKRLD+ V
Sbjct: 329 VPDPPADVEMGPLEDPVVDAHAVDEARPSANDGEGLEKRLKKNKFKKRISRRLKRLDNCV 388

Query: 128 GAIEATLTGFEATLTGFGVALKGIQRYLKKLSKGKFPDPTKYFGRGGGPDDDDPSDQRPD 187
           GAIE  L  F       GVALKGIQ YLKKL+KGKFPD +KYFG GGGPDDD PSDQRPD
Sbjct: 389 GAIEDKLGDF-------GVALKGIQIYLKKLAKGKFPDSSKYFGGGGGPDDDGPSDQRPD 448

Query: 188 EAPMPDGGPKSMDEDRRPEEVPKTDE 211
           E+P PDGG KSMDED+R +E  +TDE
Sbjct: 449 ESPKPDGGRKSMDEDQRSDEDQRTDE 467

[Close]

BLAST of MC11g_new0467 vs. ExPASy TrEMBL
Match: A0A6J1DM86 (uncharacterized protein LOC111022304 OS=Momordica charantia OX=3673 GN=LOC111022304 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 1.76e-11
Identity = 38/62 (61.29%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 35  PEPYASKTFSSIVSSYEVIDR--KERRVKDQGKNIIEDPVEEAEILDDDALQGPILDDAG 94
           P P A    +++      ++R  +ERRVKD+GKNIIEDPVEEAE LDDDALQ P LDDAG
Sbjct: 88  PAPAAVPNSAAVADLPADLERGTQERRVKDKGKNIIEDPVEEAETLDDDALQSPALDDAG 147

[Close]

BLAST of MC11g_new0467 vs. ExPASy TrEMBL
Match: A0A6J1DL40 (uncharacterized protein LOC111022110 OS=Momordica charantia OX=3673 GN=LOC111022110 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 4.15e-06
Identity = 52/123 (42.28%), Postives = 64/123 (52.03%), Query Frame = 0


Query: 106 KRKKLKNKISRRLKRLDDRVGAIEATLTGFEATLTGFGVALKGIQRYLKKLSKGKFPDPT 165
           K+KK K+K SR L+RL DRV AIE TLTG    +       K I++++K+L+K       
Sbjct: 224 KKKKSKHKWSRELRRLGDRVTAIETTLTGMTTDI-------KDIKKFMKRLTKVMSKGQN 283

Query: 166 KYFGRGGGPDDD------DPS-----DQRPDEAPMPDGGPKSMDEDRRPEEVPKTDEYRT 217
           KY  RGG PD D      DPS     D   DE P     PK+ DE R  E+ PKT E  T
Sbjct: 284 KYDRRGGVPDQDGSSGGRDPSGRNEEDMDMDEDPKTGKEPKTGDEPRMDED-PKTCEEPT 338

The following BLAST results are available for this feature:

BLAST of MC11g_new0467 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g_new0467 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153201.1	1.14e-40	60.96	uncharacterized protein LOC111020757 [Momordica charantia]	[more]
XP_022155163.1	3.63e-11	61.29	uncharacterized protein LOC111022304 [Momordica charantia]	[more]
XP_022154965.1	8.57e-06	42.28	uncharacterized protein LOC111022110 [Momordica charantia]	[more]

BLAST of MC11g_new0467 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DJX9	5.51e-41	60.96	uncharacterized protein LOC111020757 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1DM86	1.76e-11	61.29	uncharacterized protein LOC111022304 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1DL40	4.15e-06	42.28	uncharacterized protein LOC111022110 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]

BLAST of MC11g_new0467 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 192..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g_new0467.1	MC11g_new0467.1	mRNA