MC11g_new0447 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g_new0447
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	ribosomal RNA processing protein 36 homolog
Location	MC11: 17812212 .. 17815730 (+)
RNA-Seq Expression	MC11g_new0447
Synteny	MC11g_new0447

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAACAACAAGATGTCCCTATAATTCACAGCAACCCGATCGGATATCTGCAGCAAATCCGAACGCCGGAGACGAACGGAGCAACAGCCGCGTGGAGTCTTGTGGTAGCGGCAGGCACAAACGGTTATCAAAGCATTTGTGAATTAGGGCAAATAAATGGAATGAAGAAACGTAGCAGTTCTAGCAAACAAGTGATGGAGGAAAGCGAGGATCTTGAATCTTCTTCCCCAGAAGATTTTGTTGACTCGGTATCTTTTGAGCTGTTGAAATCATGTTTACGTTACATTTTTTTATTATTCAAATTCATGAATTGATTTTATTTGCAATTTGACGTTCACTTTGTTTATATAGGAAGAAGAGAATATAGAGCGTGAACTTGCCGATGTAACTTTTGAAGAGTTGCAGAGAGCGCGGTCTGATGGGTCGCATTCGACGTATCAAAAGACCAATCAAGAGAAGAAAGGTGGGAGGGCAAACAAGAACAGGTAGCTTATGGGTACTATTTTTTTTCCCTTATTTTATTGTTTGCAAGTTAATTGAGTATATGATTTGTAATTTCTTCGTGAAGGCCAATGGAGGTTAGTAGTAAGAAACCAGTTAGTAGATTCAGAGAGGTCATTCAGGCTCCTAAGAATGTGAGTTGGTTATTCCTTTTTGTTAGTTTATTGTCAAAATTTCTTGCATTTGCCTATATGGAGTTTAAACCTCCTACTTAATGATAATGAGAGTGTAACATCTCACTTAATTGAGTTCTAACGCGACTTAAGATAATAGTTGCATTTCTCACTAATAATTTGTTGGATTTCAGATGGTACGTGATCCACGTTTCGAATCTTTATCTGGCACTTTAGATGTTGAGGGGTGAGTTTTTCTTGATATGAGGTTTGATTAACTCTTTGGCATGTTGTAGAATACTATTATCTAACAAACAAAATTGGCGTTTTAAATTTTTGTTCATTCTATCTACTTCTATCCTTATCTTTCTTCTTGGTTTGAAAATTGGGAGTCTTATGTTTATTGGAATCTTACAGATTTAAGAAGAGATATAATTTCATTTACGAGAATAATCTTCCTGCTGAAAAAGAGGTATTTTCCTTGATCTATTCCCCTATTGATATAATTTATAGTTTACCGATTTTAAATTCTATTGACTGGTGACTCCATTTTATGTATTGCAACTATCACTGATACAACAGGAACTGAAAAAGCAGTTAAGGAAAACCAATGATCCAAATGTTGTTGAAGAACTAAAAAAACAGATATTTTGGATTGTAAGTGTTATTATTTTGATTTATATGTAATGAATCTCATTTTATTTTTGTTTCTATATATAATGCAACAAAAAGAGACGTTCTAGACTTCTTAATGTTAAAAATGAAAGGAAAATTAGAATGAAGTTTGTTATTGGCAAGTATTAGGAAAAATAAAAGCTCCAACTTTTTTGTTACTAGTTTATAGATTGAAGACAGAAGCTTGATACTTCATCATTACCAAATTATGTTTTATCATAATCTTATTATTTGTGCCCATTGTTTTGTTATATTTAGATTTTAGATTCATTTTTCCATGTAATTTTAGGACAAACAATTCAAATCTGACACCACAAAACGTGTCGATGCTGCAATTCTGGCCAAACACAAGAATAAAGAGAGAGAAGCAGCCAAGCTTGGGAAAAAGCCCTTCTATCTTAAGAAATGTAAGAATGTTTTCCCTCTCTTTTTGCTTAAATTCTATCTCAAGGGCATGCACTTAGGTTATGGCTTTCTGCTTGGAACTTCTACATTAAACTTTGGAGGACATTTGGTGATCATTTTCCAACAGTAGTAGTGCATATGGTGGAACTTTGTACTTTGCACTTGTGTGTTTGTGGTTATCCCATGGTTAGTATTAATACTTCTACATTAGCTAGGATTTAATTTGATAACTCTAACATGGGTGTAGTGCTGGTATCATTTTGCTTCTCTCCTTTGCCCCTGCTAAAAAGAGACAATATAGAGAGAAAAGTAGAAAATAAGAAAAAACTGGACTTCCACATGAAGGCAATGGGCAGTTTGTGCATTTGATTTCTGACATAAACACATTCTGAACATGTATACGTGATGTGAAGTGTTTGTTTTGTTATTTTCTTGAAATCTTTGCTGCATTGGGTTTTTAGGATATGCAAGGTATATGCTTGGGGAGTGAATTATAAGAAATTGAAAGATAGGTTTTCATAAAAGTTCAAATTTATGGAACTAAGATATAAATTAATAAGAGCAAAAAAATCCATAGAAATTAGTATAGAAAAAGGGAAGAGAATTAATAGATTCACTTGATAGAACTTGCTGCAGTGGTGTGACAAGATGTGAAAGTGATAAATAAGATGCAAGTTATTTTTAAGGTGTGATTTTTATCTTGTTGGAAAAGTATTTTCCATGGAGAAATATTTGCTTGAAATTGAACAAATGAGGAAGTAAGTTTGTACCTCCAATTCTTTACCACATAATTCCTCATGTTTTAAAATCATTAATATGTCTAGAGGTATATAAAAATACTTGTATTAAATGTGTCCTTCTGTCAAAGTACTAAAATTTTTAAAATATGGTATGATGTTATGGCTTATGTCCATGTCTTATCCATGACGTCCTGAATCCATGTGCGAGACTTTCAGGTCATTTCATCATAGTTGTGCATCTTGAATCTGTAGTTTGGGTGGCTGTGTAGAAAATTAATAGTTTGGTTGTCCATTATGTATTGATCTTATTTTACCGTATGTATTTTTTTCCTAGGGTATTATTTTGATAGAATTCTTGGCCGTTACGGATCATAACAATTCGTCGAAAACATTTTATTGTGGTTAATGGAAAGAACATAATATTTTTTAAAATTATCATGACTGTTTCCATCTTCAGCATTTTAAGATGCTTCACTTTCTGGTTTTGCCTGGATATGGATGTTTTCTTAAGCCTGTTTTGTCTTTTGCAGCTGAAATTCGAAAGCAAAGGCTTATTGAAAAATACAACACTCTTAAGGTATGAATCCCCTGTTTTTCATTTCAACATGGTATGTTTAGTGCTACTTATGTTTCTAAATGAGTGATTAACCATTCTGGAATTTGAACAGTCCACTGGAAAGCTTGATGCCTATATGGAGAGGAGGAGGAGGAAAAATGCTGCAAAGGATCGTAGATACGTACCATATGGACGATCTAGCAAGCTTGATGAACAAGAGTGAAGTCAAACGGGTATTATCTTGCTTTATTTTCAGGAGACTCATGTTTCCTTATTTCGAGAATTTAGAAAAAGTAAATTTAGCCTTACTCAAGATTAATCTGATATTAGTTTAAAAACTTTCTTCTTTGGAAGTTTCTTATCAGTCATCTGTAATATTAAATATTTAGTGAAACTGGTTTCCCTCTTGACTGGGGATAATTTGTTTTAATAGAAAATTTTGATAGTCTGATTTGAAAATGATGTAAAAGTTGCGGCTTAAAGAGGACAATAAGTTCCTCAATGTTAGAAATGAAAACTGTAGTATAGGAG

mRNA sequence

ATGAAGAAACGTAGCAGTTCTAGCAAACAAGTGATGGAGGAAAGCGAGGATCTTGAATCTTCTTCCCCAGAAGATTTTGTTGACTCGGAAGAAGAGAATATAGAGCGTGAACTTGCCGATGTAACTTTTGAAGAGTTGCAGAGAGCGCGGTCTGATGGGTCGCATTCGACGTATCAAAAGACCAATCAAGAGAAGAAAGGTGGGAGGGCAAACAAGAACAGGCCAATGGAGGTTAGTAGTAAGAAACCAGTTAGTAGATTCAGAGAGGTCATTCAGGCTCCTAAGAATATGGTACGTGATCCACGTTTCGAATCTTTATCTGGCACTTTAGATGTTGAGGGATTTAAGAAGAGATATAATTTCATTTACGAGAATAATCTTCCTGCTGAAAAAGAGGAACTGAAAAAGCAGTTAAGGAAAACCAATGATCCAAATGTTGTTGAAGAACTAAAAAAACAGATATTTTGGATTGACAAACAATTCAAATCTGACACCACAAAACGTGTCGATGCTGCAATTCTGGCCAAACACAAGAATAAAGAGAGAGAAGCAGCCAAGCTTGGGAAAAAGCCCTTCTATCTTAAGAAATCTGAAATTCGAAAGCAAAGGCTTATTGAAAAATACAACACTCTTAAGTCCACTGGAAAGCTTGATGCCTATATGGAGAGGAGGAGGAGGAAAAATGCTGCAAAGGATCGTAGATACGTACCATATGGACGATCTAGCAAGCTTGATGAACAAGAGTGA

Coding sequence (CDS)

ATGAAGAAACGTAGCAGTTCTAGCAAACAAGTGATGGAGGAAAGCGAGGATCTTGAATCTTCTTCCCCAGAAGATTTTGTTGACTCGGAAGAAGAGAATATAGAGCGTGAACTTGCCGATGTAACTTTTGAAGAGTTGCAGAGAGCGCGGTCTGATGGGTCGCATTCGACGTATCAAAAGACCAATCAAGAGAAGAAAGGTGGGAGGGCAAACAAGAACAGGCCAATGGAGGTTAGTAGTAAGAAACCAGTTAGTAGATTCAGAGAGGTCATTCAGGCTCCTAAGAATATGGTACGTGATCCACGTTTCGAATCTTTATCTGGCACTTTAGATGTTGAGGGATTTAAGAAGAGATATAATTTCATTTACGAGAATAATCTTCCTGCTGAAAAAGAGGAACTGAAAAAGCAGTTAAGGAAAACCAATGATCCAAATGTTGTTGAAGAACTAAAAAAACAGATATTTTGGATTGACAAACAATTCAAATCTGACACCACAAAACGTGTCGATGCTGCAATTCTGGCCAAACACAAGAATAAAGAGAGAGAAGCAGCCAAGCTTGGGAAAAAGCCCTTCTATCTTAAGAAATCTGAAATTCGAAAGCAAAGGCTTATTGAAAAATACAACACTCTTAAGTCCACTGGAAAGCTTGATGCCTATATGGAGAGGAGGAGGAGGAAAAATGCTGCAAAGGATCGTAGATACGTACCATATGGACGATCTAGCAAGCTTGATGAACAAGAGTGA

Protein sequence

MKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKLDEQE

Homology

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BLAST of MC11g_new0447 vs. ExPASy Swiss-Prot
Match: A7SL20 (Ribosomal RNA processing protein 36 homolog OS=Nematostella vectensis OX=45351 GN=v1g245966 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.2e-25
Identity = 87/240 (36.25%), Postives = 137/240 (57.08%), Query Frame = 0


Query: 12  MEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKT----NQEKKG 71
           + +S D ES + +   + E E+++ EL+ + F ELQ  +       Y        +E+  
Sbjct: 5   LSDSSDDESPTDDCSDEGEVEHLKDELSQIPFCELQDLKDKIGSKKYNLAIHGIMEERTQ 64

Query: 72  G------RANKNR-PMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYN 131
           G      +  KN+ P E+SSK+ V + R+V+Q  K M RDPRF+ LSG  + + F+K Y+
Sbjct: 65  GIPDLETKKKKNKGPQELSSKQRVPKLRKVVQVKKKMGRDPRFDDLSGKFNEDLFRKSYS 124

Query: 132 FIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNK 191
           F+ +  +  EK+ ++K+L+KT +    + L   +  +++Q +S  +         K K  
Sbjct: 125 FVNDIRV-EEKKSVEKELKKTKNAEKRKNLNDLLKVMNQQERSRKSAEAKRESKKKIKET 184

Query: 192 EREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR 241
           ERE  + GKKPFYL+KSE++K  L EKY  LKS GKL  Y+ +RR+K A+KDRR+VP  R
Sbjct: 185 ERELVQKGKKPFYLRKSELKKLELAEKYKELKSKGKLQKYLTKRRKKTASKDRRHVPERR 243

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BLAST of MC11g_new0447 vs. ExPASy Swiss-Prot
Match: A6RKG5 (rRNA biogenesis protein rrp36 OS=Botryotinia fuckeliana (strain B05.10) OX=332648 GN=rrp36 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 4.9e-25
Identity = 86/248 (34.68%), Postives = 141/248 (56.85%), Query Frame = 0


Query: 16  EDLESSSPEDFVDSEEENIERELADVTFEELQRAR------SDGSHSTYQKTN------- 75
           E+++    E+  +SEEE      A ++F  L +A+      S       +K+N       
Sbjct: 52  EEVDDDDDEELSESEEE-ASNGAASISFGALAKAQATMSKPSKRDSKNLKKSNGDGWEDN 111

Query: 76  --QEKKGG--------RANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDV 135
              E+K G        R++KN P EVSSKK VSR REV+   K  +RDPRFE  +G +D+
Sbjct: 112 EATERKAGKKDQRDFTRSSKNAPTEVSSKKAVSRRREVVPVKKREIRDPRFEPTNGPVDM 171

Query: 136 EGFKKRYNFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAA 195
           +  +K Y+F+ +     E ++LK+ +RKT D +  E+LK+++  ++ + K+D  KR    
Sbjct: 172 QKIEKNYDFLVDYR-EDEMKKLKETIRKTKDEDEKEKLKRELLRMESRKKTDARKRKARE 231

Query: 196 ILAKHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKD 241
           +L KH+ +E+E  K GK P+YLKK+E +K+ L++ +  LK   +LD  +ERRR+K   K+
Sbjct: 232 VLDKHRKEEKELVKEGKTPYYLKKAEQKKRVLLDTFGELKGR-QLDRVIERRRKKVEGKE 291

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BLAST of MC11g_new0447 vs. ExPASy Swiss-Prot
Match: A7E4K0 (rRNA biogenesis protein rrp36 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) OX=665079 GN=rrp36 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.4e-24
Identity = 83/249 (33.33%), Postives = 137/249 (55.02%), Query Frame = 0


Query: 15  SEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGG------ 74
           S++ E    E+  +SEEE      A ++F  L +A++  S  + + + + KK        
Sbjct: 51  SDETEDEVEEEASESEEETSNDAAASISFGALAKAQATMSKPSKRDSKKSKKSNADGWED 110

Query: 75  -----------------RANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLD 134
                            R++KN P E+SSKK VSR REV+   K  +RDPRF+   G +D
Sbjct: 111 NEATERKAGKKDQRDFTRSSKNAPTEISSKKAVSRRREVVPVKKREIRDPRFDPTHGPVD 170

Query: 135 VEGFKKRYNFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDA 194
           +   +K Y+F+ +     E ++L+K ++KT D +  E+LK+ +  ++ + K+D  KR   
Sbjct: 171 MGKIEKVYDFLVDYR-EDEIKKLRKTIKKTKDEDEKEKLKRDLLSMESRKKTDAKKRKAR 230

Query: 195 AILAKHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAK 241
            IL KH+ +E+E  K GK P+YLKK+E +K+ L++ Y  LK   +LD  +ERRR+K   K
Sbjct: 231 EILDKHRKEEKELVKEGKTPYYLKKAEQKKRVLLDTYGELKGR-QLDRVIERRRKKVEGK 290

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BLAST of MC11g_new0447 vs. ExPASy Swiss-Prot
Match: B6K8A0 (rRNA biogenesis protein rrp36 OS=Schizosaccharomyces japonicus (strain yFS275 / FY16936) OX=402676 GN=rrp36 PE=3 SV=2)

HSP 1 Score: 114.0 bits (284), Expect = 2.4e-24
Identity = 80/258 (31.01%), Postives = 140/258 (54.26%), Query Frame = 0


Query: 9   KQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQEKKGG 68
           + VM E E  + ++ E    ++ E+ +R+L  + F EL  A+        + T  +K G 
Sbjct: 32  EDVMSEVESTDEANDESEEKTDLESTQRQLKSIPFSELLEAQRALKSEKVKFT--QKNGA 91

Query: 69  RANKNR-----------------------PMEVSSKKPVSRFREVIQAPKNMVRDPRFES 128
           + +KNR                       P+E+SSK+ V RFREV+  PK + RDPRF++
Sbjct: 92  KLSKNRRRHESPSDSEDDDDDRNDRSKHAPVEMSSKRAVPRFREVVHVPKPLRRDPRFDT 151

Query: 129 LSGTLDVEGFKKRYNFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDT 188
           LSG L+V+  K  Y F+ E  L +E ++L+++L+   +    E +K+ +  +  + +   
Sbjct: 152 LSGNLNVDKVKNNYGFVMEYRL-SEIKQLEQELKSCREQERRERIKEALKSLRSKLERRK 211

Query: 189 TKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRR 244
                A +L +H+  E+E  + GKKPFYLKKSE +K   ++KY +++ T  LD YME+++
Sbjct: 212 EDERTARVLKEHRQSEKEKIRQGKKPFYLKKSEQKKLLQLDKYKSMEGTKALDRYMEKKQ 271

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BLAST of MC11g_new0447 vs. ExPASy Swiss-Prot
Match: Q96EU6 (Ribosomal RNA processing protein 36 homolog OS=Homo sapiens OX=9606 GN=RRP36 PE=1 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.3e-21
Identity = 75/218 (34.40%), Postives = 127/218 (58.26%), Query Frame = 0


Query: 36  RELADVTFEELQRARSDGSHSTYQK----TNQEKKGGR--------ANKNRPMEVSSKKP 95
           R  ++++FEEL   +S     TY++     + +K+  R        A+K+RP+E+S+K  
Sbjct: 43  RGTSNMSFEELLELQSQVGTKTYKQLVAGNSPKKQASRPPIQNACVADKHRPLEMSAKIR 102

Query: 96  VSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYENNLPA-EKEELKKQLRKTN 155
           V   R+V+   K + RDPRF+ LSG  + E F K Y F+  N++ A EKE +KKQL+K  
Sbjct: 103 VPFLRQVVPISKKVARDPRFDDLSGEYNPEVFDKTYQFL--NDIRAKEKELVKKQLKKHL 162

Query: 156 DPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNKEREAAKLGKKPFYLKKSEIRKQ 215
                E+L++ +  +++Q  +   ++    +    K + R  A+ G +P++LKKSE R+ 
Sbjct: 163 SGEEHEKLQQLLQRMEQQEMAQQERKQQQELHLALKQERRAQAQQGHRPYFLKKSEQRQL 222

Query: 216 RLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR 241
            L EK+  LK + KL+ ++ R+RR+NA KDRR++P  +
Sbjct: 223 ALAEKFKELKRSKKLENFLSRKRRRNAGKDRRHLPLSK 258

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BLAST of MC11g_new0447 vs. NCBI nr
Match: XP_022141752.1 (ribosomal RNA processing protein 36 homolog [Momordica charantia])

HSP 1 Score: 455 bits (1170), Expect = 1.15e-160
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   MKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQK 60
           MKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQK
Sbjct: 1   MKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQK 60

Query: 61  TNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYN 120
           TNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYN
Sbjct: 61  TNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYN 120

Query: 121 FIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNK 180
           FIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNK
Sbjct: 121 FIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNK 180

Query: 181 EREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR 240
           EREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR
Sbjct: 181 EREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR 240

Query: 241 SSKLDEQE 248
           SSKLDEQE
Sbjct: 241 SSKLDEQE 248

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BLAST of MC11g_new0447 vs. NCBI nr
Match: XP_038889542.1 (ribosomal RNA processing protein 36 homolog [Benincasa hispida] >XP_038889543.1 ribosomal RNA processing protein 36 homolog [Benincasa hispida])

HSP 1 Score: 394 bits (1011), Expect = 2.31e-136
Identity = 220/253 (86.96%), Postives = 234/253 (92.49%), Query Frame = 0


Query: 1   MKKRSSS----SKQVMEE-SEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSH 60
           MKK SSS     KQ+MEE SED ESSS +D +DSEEENIERELADVTFEELQRARSDGSH
Sbjct: 1   MKKHSSSVLSSGKQIMEEESEDFESSSSDDSLDSEEENIERELADVTFEELQRARSDGSH 60

Query: 61  STYQKTNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGF 120
           S +QKT QEKKGGRANKNRPMEVSS+KPVSRFREVIQAPKNMVRDPRFESLSGTLDV+GF
Sbjct: 61  SMFQKTKQEKKGGRANKNRPMEVSSRKPVSRFREVIQAPKNMVRDPRFESLSGTLDVDGF 120

Query: 121 KKRYNFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILA 180
           KKRY+FIYEN LPAEKEELKKQLRKTNDPNVVEELK Q+ WIDKQFKSD+TKRVDAAILA
Sbjct: 121 KKRYSFIYENKLPAEKEELKKQLRKTNDPNVVEELKNQLSWIDKQFKSDSTKRVDAAILA 180

Query: 181 KHKNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRY 240
           KHK KEREAAK GKKPFYLKKSEIRKQRLIEKY +LKSTGKLDAY+ERRRRKNAAKDRRY
Sbjct: 181 KHKKKEREAAKHGKKPFYLKKSEIRKQRLIEKYTSLKSTGKLDAYVERRRRKNAAKDRRY 240

Query: 241 VPYGRSSKLDEQE 248
           +P+ RSSKLDEQ+
Sbjct: 241 IPHQRSSKLDEQD 253

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BLAST of MC11g_new0447 vs. NCBI nr
Match: XP_008456647.1 (PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo] >XP_016902001.1 PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo] >XP_016902002.1 PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo] >KAA0031699.1 ribosomal RNA processing protein 36-like protein [Cucumis melo var. makuwa] >TYK04413.1 ribosomal RNA processing protein 36-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 393 bits (1010), Expect = 3.28e-136
Identity = 215/244 (88.11%), Postives = 230/244 (94.26%), Query Frame = 0


Query: 6   SSSKQVMEE-SEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQE 65
           SS KQ+MEE SEDLESSS ++ +DSEEENIERELADVTFEELQRARSDGSHS YQKT QE
Sbjct: 10  SSGKQIMEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQE 69

Query: 66  KKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYE 125
           KKGGRANKNRPMEVSS+KPVSRFREVIQAPK+MVRDPRFESLSGTLDV+GFKKRY+FIYE
Sbjct: 70  KKGGRANKNRPMEVSSRKPVSRFREVIQAPKHMVRDPRFESLSGTLDVDGFKKRYSFIYE 129

Query: 126 NNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNKEREA 185
            NLPAEKEELKKQLRKTNDPNV EELKKQ+ WIDKQFKSD+TKRVDAAILAKHK KEREA
Sbjct: 130 KNLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREA 189

Query: 186 AKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKL 245
           AK GKKPFYLKKSEIRKQRL+EKY  LKSTGKLDAY+ER+RRKNAAKDRRY+PY RSSKL
Sbjct: 190 AKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRYIPYQRSSKL 249

Query: 246 DEQE 248
           DEQ+
Sbjct: 250 DEQD 253

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BLAST of MC11g_new0447 vs. NCBI nr
Match: XP_023535518.1 (ribosomal RNA processing protein 36 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 390 bits (1001), Expect = 7.70e-135
Identity = 217/244 (88.93%), Postives = 227/244 (93.03%), Query Frame = 0


Query: 6   SSSKQVME-ESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQE 65
           SSSKQ+ME E EDLE SS E+ +DSEEENIERELADVTFEELQR RSDGSHS YQKTNQE
Sbjct: 10  SSSKQMMEDEREDLEYSSSEESLDSEEENIERELADVTFEELQRVRSDGSHSMYQKTNQE 69

Query: 66  KKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYE 125
           KKG RANKNRPMEVSSKKPV RFREVIQAPK+MVRDPRFESL+G+LDVEGFKKRY+FIYE
Sbjct: 70  KKGRRANKNRPMEVSSKKPVGRFREVIQAPKSMVRDPRFESLTGSLDVEGFKKRYSFIYE 129

Query: 126 NNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNKEREA 185
           NNLPAEKEELKKQLRKTND NVVEELKKQ+ WIDKQFKSD+TKRVDAAILA HK KEREA
Sbjct: 130 NNLPAEKEELKKQLRKTNDSNVVEELKKQLSWIDKQFKSDSTKRVDAAILANHKKKEREA 189

Query: 186 AKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKL 245
           AK GKKPFYLKKSEIRKQRL EKYNTLKSTGKLDAYMERRRRKNAAKDRRY+PY RSSK 
Sbjct: 190 AKHGKKPFYLKKSEIRKQRLTEKYNTLKSTGKLDAYMERRRRKNAAKDRRYIPYQRSSKS 249

Query: 246 DEQE 248
           DEQE
Sbjct: 250 DEQE 253

[Close]

BLAST of MC11g_new0447 vs. NCBI nr
Match: XP_022973531.1 (ribosomal RNA processing protein 36 homolog [Cucurbita maxima])

HSP 1 Score: 390 bits (1001), Expect = 7.70e-135
Identity = 217/244 (88.93%), Postives = 226/244 (92.62%), Query Frame = 0


Query: 6   SSSKQVME-ESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQE 65
           SSSKQ+ME E EDLE SS E+ +DSEEENIERELADVTFEELQR RSDGSHS YQKTNQE
Sbjct: 10  SSSKQMMEDEREDLEYSSSEESLDSEEENIERELADVTFEELQRVRSDGSHSMYQKTNQE 69

Query: 66  KKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYE 125
           KKG RANKNRPMEVSSKKPV RFREVIQAPKNMVRDPRFESL+G+LDVEGFKKRY+FIYE
Sbjct: 70  KKGRRANKNRPMEVSSKKPVGRFREVIQAPKNMVRDPRFESLTGSLDVEGFKKRYSFIYE 129

Query: 126 NNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNKEREA 185
           NNLPAEKEELKKQLRKTND NVVEELKKQ+ WIDKQFKSD+TKRVDAAILA HK KEREA
Sbjct: 130 NNLPAEKEELKKQLRKTNDSNVVEELKKQLSWIDKQFKSDSTKRVDAAILANHKKKEREA 189

Query: 186 AKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKL 245
           AK GKKPFYLKKSEIRKQRL EKYN LKSTGKLDAYMERRRRKNAAKDRRY+PY RSSK 
Sbjct: 190 AKHGKKPFYLKKSEIRKQRLTEKYNALKSTGKLDAYMERRRRKNAAKDRRYIPYQRSSKS 249

Query: 246 DEQE 248
           DEQE
Sbjct: 250 DEQE 253

[Close]

BLAST of MC11g_new0447 vs. ExPASy TrEMBL
Match: A0A6J1CKR1 (ribosomal RNA processing protein 36 homolog OS=Momordica charantia OX=3673 GN=LOC111012036 PE=3 SV=1)

HSP 1 Score: 455 bits (1170), Expect = 5.57e-161
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   MKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQK 60
           MKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQK
Sbjct: 1   MKKRSSSSKQVMEESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQK 60

Query: 61  TNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYN 120
           TNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYN
Sbjct: 61  TNQEKKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYN 120

Query: 121 FIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNK 180
           FIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNK
Sbjct: 121 FIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNK 180

Query: 181 EREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR 240
           EREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR
Sbjct: 181 EREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGR 240

Query: 241 SSKLDEQE 248
           SSKLDEQE
Sbjct: 241 SSKLDEQE 248

[Close]

BLAST of MC11g_new0447 vs. ExPASy TrEMBL
Match: A0A1S3C3C0 (ribosomal RNA processing protein 36 homolog OS=Cucumis melo OX=3656 GN=LOC103496541 PE=3 SV=1)

HSP 1 Score: 393 bits (1010), Expect = 1.59e-136
Identity = 215/244 (88.11%), Postives = 230/244 (94.26%), Query Frame = 0


Query: 6   SSSKQVMEE-SEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQE 65
           SS KQ+MEE SEDLESSS ++ +DSEEENIERELADVTFEELQRARSDGSHS YQKT QE
Sbjct: 10  SSGKQIMEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQE 69

Query: 66  KKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYE 125
           KKGGRANKNRPMEVSS+KPVSRFREVIQAPK+MVRDPRFESLSGTLDV+GFKKRY+FIYE
Sbjct: 70  KKGGRANKNRPMEVSSRKPVSRFREVIQAPKHMVRDPRFESLSGTLDVDGFKKRYSFIYE 129

Query: 126 NNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNKEREA 185
            NLPAEKEELKKQLRKTNDPNV EELKKQ+ WIDKQFKSD+TKRVDAAILAKHK KEREA
Sbjct: 130 KNLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREA 189

Query: 186 AKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKL 245
           AK GKKPFYLKKSEIRKQRL+EKY  LKSTGKLDAY+ER+RRKNAAKDRRY+PY RSSKL
Sbjct: 190 AKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRYIPYQRSSKL 249

Query: 246 DEQE 248
           DEQ+
Sbjct: 250 DEQD 253

[Close]

BLAST of MC11g_new0447 vs. ExPASy TrEMBL
Match: A0A5A7SR00 (Ribosomal RNA processing protein 36-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00090 PE=3 SV=1)

HSP 1 Score: 393 bits (1010), Expect = 1.59e-136
Identity = 215/244 (88.11%), Postives = 230/244 (94.26%), Query Frame = 0


Query: 6   SSSKQVMEE-SEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQE 65
           SS KQ+MEE SEDLESSS ++ +DSEEENIERELADVTFEELQRARSDGSHS YQKT QE
Sbjct: 10  SSGKQIMEEESEDLESSSSDESLDSEEENIERELADVTFEELQRARSDGSHSMYQKTKQE 69

Query: 66  KKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYE 125
           KKGGRANKNRPMEVSS+KPVSRFREVIQAPK+MVRDPRFESLSGTLDV+GFKKRY+FIYE
Sbjct: 70  KKGGRANKNRPMEVSSRKPVSRFREVIQAPKHMVRDPRFESLSGTLDVDGFKKRYSFIYE 129

Query: 126 NNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNKEREA 185
            NLPAEKEELKKQLRKTNDPNV EELKKQ+ WIDKQFKSD+TKRVDAAILAKHK KEREA
Sbjct: 130 KNLPAEKEELKKQLRKTNDPNVAEELKKQLSWIDKQFKSDSTKRVDAAILAKHKKKEREA 189

Query: 186 AKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKL 245
           AK GKKPFYLKKSEIRKQRL+EKY  LKSTGKLDAY+ER+RRKNAAKDRRY+PY RSSKL
Sbjct: 190 AKHGKKPFYLKKSEIRKQRLVEKYTNLKSTGKLDAYVERKRRKNAAKDRRYIPYQRSSKL 249

Query: 246 DEQE 248
           DEQ+
Sbjct: 250 DEQD 253

[Close]

BLAST of MC11g_new0447 vs. ExPASy TrEMBL
Match: A0A6J1I8W9 (ribosomal RNA processing protein 36 homolog OS=Cucurbita maxima OX=3661 GN=LOC111472062 PE=3 SV=1)

HSP 1 Score: 390 bits (1001), Expect = 3.73e-135
Identity = 217/244 (88.93%), Postives = 226/244 (92.62%), Query Frame = 0


Query: 6   SSSKQVME-ESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQE 65
           SSSKQ+ME E EDLE SS E+ +DSEEENIERELADVTFEELQR RSDGSHS YQKTNQE
Sbjct: 10  SSSKQMMEDEREDLEYSSSEESLDSEEENIERELADVTFEELQRVRSDGSHSMYQKTNQE 69

Query: 66  KKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYE 125
           KKG RANKNRPMEVSSKKPV RFREVIQAPKNMVRDPRFESL+G+LDVEGFKKRY+FIYE
Sbjct: 70  KKGRRANKNRPMEVSSKKPVGRFREVIQAPKNMVRDPRFESLTGSLDVEGFKKRYSFIYE 129

Query: 126 NNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNKEREA 185
           NNLPAEKEELKKQLRKTND NVVEELKKQ+ WIDKQFKSD+TKRVDAAILA HK KEREA
Sbjct: 130 NNLPAEKEELKKQLRKTNDSNVVEELKKQLSWIDKQFKSDSTKRVDAAILANHKKKEREA 189

Query: 186 AKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKL 245
           AK GKKPFYLKKSEIRKQRL EKYN LKSTGKLDAYMERRRRKNAAKDRRY+PY RSSK 
Sbjct: 190 AKHGKKPFYLKKSEIRKQRLTEKYNALKSTGKLDAYMERRRRKNAAKDRRYIPYQRSSKS 249

Query: 246 DEQE 248
           DEQE
Sbjct: 250 DEQE 253

[Close]

BLAST of MC11g_new0447 vs. ExPASy TrEMBL
Match: A0A6J1EBL5 (ribosomal RNA processing protein 36 homolog OS=Cucurbita moschata OX=3662 GN=LOC111432703 PE=3 SV=1)

HSP 1 Score: 388 bits (996), Expect = 2.15e-134
Identity = 216/244 (88.52%), Postives = 226/244 (92.62%), Query Frame = 0


Query: 6   SSSKQVME-ESEDLESSSPEDFVDSEEENIERELADVTFEELQRARSDGSHSTYQKTNQE 65
           SSSKQ+ME E EDLE SS E+ +DSEEENIERELADVTFEELQR RSDGSHS YQKTNQE
Sbjct: 10  SSSKQMMEDEREDLEYSSSEESLDSEEENIERELADVTFEELQRVRSDGSHSMYQKTNQE 69

Query: 66  KKGGRANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKRYNFIYE 125
           KKG RANKNRPMEVSSKKPV RFREVIQAPKNMVRDPRFESL+G+LDVEGFKKRY+FIYE
Sbjct: 70  KKGRRANKNRPMEVSSKKPVGRFREVIQAPKNMVRDPRFESLTGSLDVEGFKKRYSFIYE 129

Query: 126 NNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSDTTKRVDAAILAKHKNKEREA 185
           NNLPAEKEELKKQLRK +D NVVEELKKQ+ WIDKQFKSD+TKRVDAAILA HK KEREA
Sbjct: 130 NNLPAEKEELKKQLRKASDSNVVEELKKQLSWIDKQFKSDSTKRVDAAILANHKKKEREA 189

Query: 186 AKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVPYGRSSKL 245
           AK GKKPFYLKKSEIRKQRL EKYNTLKSTGKLDAYMERRRRKNAAKDRRY+PY RSSK 
Sbjct: 190 AKHGKKPFYLKKSEIRKQRLTEKYNTLKSTGKLDAYMERRRRKNAAKDRRYIPYQRSSKS 249

Query: 246 DEQE 248
           DEQE
Sbjct: 250 DEQE 253

[Close]

BLAST of MC11g_new0447 vs. TAIR 10
Match: AT1G12650.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 (InterPro:IPR009292); Has 700 Blast hits to 631 proteins in 192 species: Archae - 0; Bacteria - 32; Metazoa - 138; Fungi - 168; Plants - 60; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). )

HSP 1 Score: 245.7 bits (626), Expect = 3.8e-65
Identity = 144/246 (58.54%), Postives = 183/246 (74.39%), Query Frame = 0


Query: 2   KKRSSSSKQVMEESEDLESSSPEDFVDS-EEENIERELADVTFEELQRARSDGSHSTYQK 61
           K   SSSK V E+SE+ E  S      S EEE  E+EL   TFEE+ + R+DGS +   K
Sbjct: 6   KFEGSSSKIVFEDSEEDEDLSCSSVSSSDEEEETEKEL---TFEEIHKLRADGSKAVPWK 65

Query: 62  TNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKR 121
            NQ KK G  RANKNRPMEVSSKKPVSR+REV+  PK  VRDPRF  L GTLDVEGF+KR
Sbjct: 66  PNQVKKTGRARANKNRPMEVSSKKPVSRYREVVHVPKKEVRDPRFNQLGGTLDVEGFRKR 125

Query: 122 YNFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSD-TTKRVDAAILAKH 181
           YNF +E+ LP E+EELKK+L+KT +P  ++ELK Q+ +++K  K + +T+   AAIL +H
Sbjct: 126 YNFFFEDKLPVEREELKKKLKKTKNPEEIDELKNQLTYVEKMLKYEPSTQNKGAAILTEH 185

Query: 182 KNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVP 241
           K KEREAAK GK+P+YLKKSEIRKQ LIEKYN+LK +GKL +Y+++RR+KNA KD R++P
Sbjct: 186 KKKEREAAKEGKRPYYLKKSEIRKQTLIEKYNSLKESGKLTSYLDKRRKKNATKDHRFMP 245

Query: 242 YGRSSK 244
           Y R+ +
Sbjct: 246 YRRAEE 248

[Close]

BLAST of MC11g_new0447 vs. TAIR 10
Match: AT1G12650.2 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 (InterPro:IPR009292); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 245.7 bits (626), Expect = 3.8e-65
Identity = 144/246 (58.54%), Postives = 183/246 (74.39%), Query Frame = 0


Query: 2   KKRSSSSKQVMEESEDLESSSPEDFVDS-EEENIERELADVTFEELQRARSDGSHSTYQK 61
           K   SSSK V E+SE+ E  S      S EEE  E+EL   TFEE+ + R+DGS +   K
Sbjct: 6   KFEGSSSKIVFEDSEEDEDLSCSSVSSSDEEEETEKEL---TFEEIHKLRADGSKAVPWK 65

Query: 62  TNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKR 121
            NQ KK G  RANKNRPMEVSSKKPVSR+REV+  PK  VRDPRF  L GTLDVEGF+KR
Sbjct: 66  PNQVKKTGRARANKNRPMEVSSKKPVSRYREVVHVPKKEVRDPRFNQLGGTLDVEGFRKR 125

Query: 122 YNFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSD-TTKRVDAAILAKH 181
           YNF +E+ LP E+EELKK+L+KT +P  ++ELK Q+ +++K  K + +T+   AAIL +H
Sbjct: 126 YNFFFEDKLPVEREELKKKLKKTKNPEEIDELKNQLTYVEKMLKYEPSTQNKGAAILTEH 185

Query: 182 KNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVP 241
           K KEREAAK GK+P+YLKKSEIRKQ LIEKYN+LK +GKL +Y+++RR+KNA KD R++P
Sbjct: 186 KKKEREAAKEGKRPYYLKKSEIRKQTLIEKYNSLKESGKLTSYLDKRRKKNATKDHRFMP 245

Query: 242 YGRSSK 244
           Y R+ +
Sbjct: 246 YRRAEE 248

[Close]

BLAST of MC11g_new0447 vs. TAIR 10
Match: AT1G12650.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 (InterPro:IPR009292); Has 700 Blast hits to 631 proteins in 192 species: Archae - 0; Bacteria - 32; Metazoa - 138; Fungi - 168; Plants - 60; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). )

HSP 1 Score: 245.7 bits (626), Expect = 3.8e-65
Identity = 144/246 (58.54%), Postives = 183/246 (74.39%), Query Frame = 0


Query: 2   KKRSSSSKQVMEESEDLESSSPEDFVDS-EEENIERELADVTFEELQRARSDGSHSTYQK 61
           K   SSSK V E+SE+ E  S      S EEE  E+EL   TFEE+ + R+DGS +   K
Sbjct: 6   KFEGSSSKIVFEDSEEDEDLSCSSVSSSDEEEETEKEL---TFEEIHKLRADGSKAVPWK 65

Query: 62  TNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKR 121
            NQ KK G  RANKNRPMEVSSKKPVSR+REV+  PK  VRDPRF  L GTLDVEGF+KR
Sbjct: 66  PNQVKKTGRARANKNRPMEVSSKKPVSRYREVVHVPKKEVRDPRFNQLGGTLDVEGFRKR 125

Query: 122 YNFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSD-TTKRVDAAILAKH 181
           YNF +E+ LP E+EELKK+L+KT +P  ++ELK Q+ +++K  K + +T+   AAIL +H
Sbjct: 126 YNFFFEDKLPVEREELKKKLKKTKNPEEIDELKNQLTYVEKMLKYEPSTQNKGAAILTEH 185

Query: 182 KNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVP 241
           K KEREAAK GK+P+YLKKSEIRKQ LIEKYN+LK +GKL +Y+++RR+KNA KD R++P
Sbjct: 186 KKKEREAAKEGKRPYYLKKSEIRKQTLIEKYNSLKESGKLTSYLDKRRKKNATKDHRFMP 245

Query: 242 YGRSSK 244
           Y R+ +
Sbjct: 246 YRRAEE 248

[Close]

BLAST of MC11g_new0447 vs. TAIR 10
Match: AT1G12650.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 (InterPro:IPR009292); Has 700 Blast hits to 631 proteins in 192 species: Archae - 0; Bacteria - 32; Metazoa - 138; Fungi - 168; Plants - 60; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). )

HSP 1 Score: 245.7 bits (626), Expect = 3.8e-65
Identity = 144/246 (58.54%), Postives = 183/246 (74.39%), Query Frame = 0


Query: 2   KKRSSSSKQVMEESEDLESSSPEDFVDS-EEENIERELADVTFEELQRARSDGSHSTYQK 61
           K   SSSK V E+SE+ E  S      S EEE  E+EL   TFEE+ + R+DGS +   K
Sbjct: 6   KFEGSSSKIVFEDSEEDEDLSCSSVSSSDEEEETEKEL---TFEEIHKLRADGSKAVPWK 65

Query: 62  TNQEKKGG--RANKNRPMEVSSKKPVSRFREVIQAPKNMVRDPRFESLSGTLDVEGFKKR 121
            NQ KK G  RANKNRPMEVSSKKPVSR+REV+  PK  VRDPRF  L GTLDVEGF+KR
Sbjct: 66  PNQVKKTGRARANKNRPMEVSSKKPVSRYREVVHVPKKEVRDPRFNQLGGTLDVEGFRKR 125

Query: 122 YNFIYENNLPAEKEELKKQLRKTNDPNVVEELKKQIFWIDKQFKSD-TTKRVDAAILAKH 181
           YNF +E+ LP E+EELKK+L+KT +P  ++ELK Q+ +++K  K + +T+   AAIL +H
Sbjct: 126 YNFFFEDKLPVEREELKKKLKKTKNPEEIDELKNQLTYVEKMLKYEPSTQNKGAAILTEH 185

Query: 182 KNKEREAAKLGKKPFYLKKSEIRKQRLIEKYNTLKSTGKLDAYMERRRRKNAAKDRRYVP 241
           K KEREAAK GK+P+YLKKSEIRKQ LIEKYN+LK +GKL +Y+++RR+KNA KD R++P
Sbjct: 186 KKKEREAAKEGKRPYYLKKSEIRKQTLIEKYNSLKESGKLTSYLDKRRKKNATKDHRFMP 245

Query: 242 YGRSSK 244
           Y R+ +
Sbjct: 246 YRRAEE 248

The following BLAST results are available for this feature:

BLAST of MC11g_new0447 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A7SL20	2.2e-25	36.25	Ribosomal RNA processing protein 36 homolog OS=Nematostella vectensis OX=45351 G...	[more]
A6RKG5	4.9e-25	34.68	rRNA biogenesis protein rrp36 OS=Botryotinia fuckeliana (strain B05.10) OX=33264...	[more]
A7E4K0	1.4e-24	33.33	rRNA biogenesis protein rrp36 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1...	[more]
B6K8A0	2.4e-24	31.01	rRNA biogenesis protein rrp36 OS=Schizosaccharomyces japonicus (strain yFS275 / ...	[more]
Q96EU6	3.3e-21	34.40	Ribosomal RNA processing protein 36 homolog OS=Homo sapiens OX=9606 GN=RRP36 PE=...	[more]

BLAST of MC11g_new0447 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141752.1	1.15e-160	100.00	ribosomal RNA processing protein 36 homolog [Momordica charantia]	[more]
XP_038889542.1	2.31e-136	86.96	ribosomal RNA processing protein 36 homolog [Benincasa hispida] >XP_038889543.1 ...	[more]
XP_008456647.1	3.28e-136	88.11	PREDICTED: ribosomal RNA processing protein 36 homolog [Cucumis melo] >XP_016902...	[more]
XP_023535518.1	7.70e-135	88.93	ribosomal RNA processing protein 36 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022973531.1	7.70e-135	88.93	ribosomal RNA processing protein 36 homolog [Cucurbita maxima]	[more]

BLAST of MC11g_new0447 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CKR1	5.57e-161	100.00	ribosomal RNA processing protein 36 homolog OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A1S3C3C0	1.59e-136	88.11	ribosomal RNA processing protein 36 homolog OS=Cucumis melo OX=3656 GN=LOC103496...	[more]
A0A5A7SR00	1.59e-136	88.11	Ribosomal RNA processing protein 36-like protein OS=Cucumis melo var. makuwa OX=...	[more]
A0A6J1I8W9	3.73e-135	88.93	ribosomal RNA processing protein 36 homolog OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1EBL5	2.15e-134	88.52	ribosomal RNA processing protein 36 homolog OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of MC11g_new0447 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12650.1	3.8e-65	58.54	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 ...	[more]
AT1G12650.2	3.8e-65	58.54	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 ...	[more]
AT1G12650.3	3.8e-65	58.54	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G12650.4	3.8e-65	58.54	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 194..214
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..93
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..248
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 65..84
IPR009292	rRNA biogenesis protein RRP36	PFAM	PF06102	RRP36	coord: 69..234 e-value: 4.5E-48 score: 163.4
IPR009292	rRNA biogenesis protein RRP36	PANTHER	PTHR21738	UNCHARACTERIZED	coord: 14..241

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g_new0447.1	MC11g_new0447.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000469	cleavage involved in rRNA processing
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
cellular_component	GO:0030686	90S preribosome
cellular_component	GO:0005730	nucleolus