MC11g_new0283 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g_new0283
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC11: 11919594 .. 11923214 (-)
RNA-Seq Expression	MC11g_new0283
Synteny	MC11g_new0283

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAATTCAACACGTCTAACAGGAAACTTGATATGGGATGTGCCTGAAGGCGTATCATGCTTCTCAAGGAGACGAAAAAACAGAAGAAGAAATCATGGAGACGGTCCTTGGGAGAAGATCAAACTATATAATAGGAATTGGATATGGACCGAAACCCACCAGAAACAAAGGATCATCATCAAAATACTCTGATGAATATGTGGAGTCATTAGAGGCTCGTCTTCAGAAGCATGAGGAAGAATTGGCAACTCAACGAAAAGCGAACGAAGACCAACAAATTGCCACCCAAGAACAAATACAAAAAGCATTGGAGGCTCAAAGCCAGGAGTTTAACAGGAAACTTCTCGAAATGCAACAAATGTTTCTTTCGAGGCGAGGAAGTTATCGAATTGTAAAGTATGTCGTGAAATTAGTTTCTTGATGTTATGGTTATGTGCTCAAGTGTTAAAACTTTACGTACGTTTTGAGGGTATATCTTCTAGATTATGTTTGTCTGAAGTATGATATGATTTACGTATGATATTGAGTATGTCTGATTTTCTTTGGAATATATCATACCTTTGGAGTATGTCTGAGTTTATTTGGAGCTCTGTTTTGGAATGTTTGGTTGGAGAGTAAAAGAGTTTGTGACGTTCGTGACATTCGGGGGGGGGAGGTTGGATAAGATTTAATAAGTGTTCTAATTTAAATGGTTGATCTCGTGTGATTTTTAGGAAATGAAGATATGGGTGGGTGTTATGCGTTTATGTGTGTGTATTGAGTATGTCTGCTTTTCTTTGGAATATATTTTACTTTTGGAATATGTCTGAGTTTATCTGGAGCTTTGTTTTGAAACGTTTGGTTGGAGTGGAAATAAGTTTGTGACGTTCGTGACATAGGGGGGGGGGGGGANATTGTGACATTGGGTTATGATTTTTTCTTTTAGGTATTGTGACATTGGATAGGTATATGTGACATTGGGTTATAAGTTTATGTGTTTGGTATTGGAATAAAAAGGGGCGGGTTTGTGACATTTGATGTATTTGGTATTTATTATGCATTTCGTTGTTGTTTTACTATCATGTTAGTTAGTTTAGTTTATTGGTTTGATTTTATTTATTCATGTAGAATCTACTTTTATACTTATACTACAAAAATAATTGATACAATTCTTTGTGCAGGATTGATGCTACAAGGATGGTGGAGGCTTGGACGTTCGAGAGGATTATTTAGTTAGATGCTTGACGGTATTTTTATTTTGTACTCTAATTTTATAATGAATTTTATTTTTACACACTTTGCAATGTTATGAATGATACAATTGTTCAAAGATATTTGCTATATTTTTAAAATTTAGCAAAAAATTTTAAGGTCAAATTTTGTTATTATGGAAAAAGTATATTCAGCAAATTTCGGATGAGAAATGAAGAACATTAAAATGTTTGTATGAAAATCGTGGAAATTTAGGATTGAAATTAAGAAAGAAAGAAACAATGAAATAATATTATTAATACAAAAAAAAAGCGACGTTTTTCTGATTTTCGTCGCCTGCAAAAAAAAAAAAGCGACGAAACGTTTTGGTCGCCTGCCAATAAAAAAGGCGACGGAACGTTTTGGTCGCTTTATAGACAACGAAACACGGTTTCATCGCCTGCCAAGAGAGGGAGCGACGAAACCTTGCTTTCGTCGCTTCCCTGGCGACGAAAAACGTTTCGTCGCTACTAACGCGACGAAAACGTAGTTTCGTCGTTGAAACCGTTCAGCGACATGGAATCAGCGACGAAACTAGCGATGTAGTCTGTTTCATCGCTGAAAAACATCAGCGACGAAATTTAGGCTTCAACGACTAAAAATTTTCGTCGCTGAATGTCTAGAATTTTGTTGTGTACATTTCTAACATAATGAACAGAATTCCTAGGGAGGAATTCAAACCCAGAAGGGTCTTTGATGAGGCAATCCACTTTCTCCGTGTCTATTCTCATTTGTGCCAAGGGACTCTAAGCACTTTGAACAAAGAAGTAAACTTATGAAACTTTTCTAAGTTTTTATATTAATAAACATTGTCCTATTGTAATACATGGAAGGAAACACGAAGATACATTAGCGTAATTGGAAGAGACTTTGTTACAGTAGGGGTCCATGATTTAAGACCTGGTGATTTTTAATGAGGCAATGCCTACTAAACAAAGTTGGATGATCCTCAAAAGCTCAAGCAAACTTGTTATCAAGGATCTTCATAGTAAGATATATTTCCAAACTAGTAACTTTCTCAAAGTAAAAATAGGAAACAATCCTTTCGTTACTTGGCAAAGCATCCTATGGGAAAGGAGTTGTTTGAGAAAGGATATCAATGAAGGATTAATTAGAAGCGGTCATTGTGTTAACATTGAATTAGATTCATAGATCCTTAGTAGTCAAAGAAGCATCCAAAGACAGATCGATTGCACTCCTCCAAAACAAAAATAACTAGGGGAACGAGGCACTAATTGAGGTAAAATTTTCATGGAATGAAAAGCCAACTTATTTAAACACATTCAAAATAATATATATATATATCCAATTTTTTTCAACATTTTTTAACACGTCAACTGATTCAACACAGATTTGAATTTTTGACTAAAAGGGGTGGATTTGATTCACCCACCCCATGTGTTGTGGTAAGAAACAAAATAACACCCCCACCCCACTAAAAATAATAATATTCCCACACCTTTTACAAAGGGAAAGGGGTAAGTAAAATCATGATTTTATGGTAGGAATGTGGACTACTCAACCAAATAGAATAGCAATAGGTTAAAAGCAAATGGCTTTTGTATGAGCAAATGGTAAACAGACACGCATGCCAGATCAGATCCATCATTCATGCTCATACATGCATACATGAAATGCTTAGTGGGGACCACCAAACCAACCACCGTATCGTTAAAAGAGTGAAAAATAGAGTTTTCTAAATAAATAAAATTCCTTGCACCGTGTTGCGCCACGTTCTATACCATTTCTCTCTTGCTTTCCTTTAAGTCTATTATTATTATTATTATTTTACTGCTACGTAATTTAACTGTTTAAATATTTTTTTTAAGGTTTTCTCAATTTTTTTAATTTAGATACTTTATTTATATACATATTGTTGAAAGAGATTATTTCACTGTGATGTCACAAATTTAAAATTATATTCCGGACCAATCACAAATTTACACGTGTTCTAAATTAATTTTGAAATCGACGGATCAAATTATGTCACAGATTTCTCTTATGGATGGACAAAAACTCTATAAATAGAGGGAGTCACCTCTCATTTGGGACATGGAGAAAGATTCAGAAGGATTTGGAAGAATTGAAGATTGAGAGTCCAGTCGAAGAACTTCACAAGCTGCAAAGCTGAAGACCTTACATATTCTTCAATAAGCTCAAAGTTGAAGAACTCACAAAGTATTCATCAAGCTACAAGCCAAAGAACTTCATCAACAAGTCGAAGTTTTCAACAACCTCAAAGTCGAAAACTTCAAAGATCCTTCGATATATAAGAAAGAAGTTGAAGGCATCAACGTCATTGATTCAAAACAAGCTCACAAGCCATTGAATTAAAGTTTACATCTGAGAGAATTATACATTAGAGATTATACACTACTTACATAAATACAA

mRNA sequence

ATGTGCCTGAAGGCGTATCATGCTTCTCAAGGAGACGAAAAAACAGAAGAAGAAATCATGGAGACGGTCCTTGGGAGAAGATCAAACTATATAATAGGAATTGGATATGGACCGAAACCCACCAGAAACAAAGGATCATCATCAAAATACTCTGATGAATATGTGGAGTCATTAGAGGCTCGTCTTCAGAAGCATGAGGAAGAATTGGCAACTCAACGAAAAGCGAACGAAGACCAACAAATTGCCACCCAAGAACAAATACAAAAAGCATTGGAGGCTCAAAGCCAGGAGTTTAACAGGAAACTTCTCGAAATGCAACAAATGTTTCTTTCGAGGCGAGGAAGTTATCGAATTGTAAAGATTGATGCTACAAGGATGGTGGAGGCTTGGACGTTCGAGAGGATTATTTAG

Coding sequence (CDS)

ATGTGCCTGAAGGCGTATCATGCTTCTCAAGGAGACGAAAAAACAGAAGAAGAAATCATGGAGACGGTCCTTGGGAGAAGATCAAACTATATAATAGGAATTGGATATGGACCGAAACCCACCAGAAACAAAGGATCATCATCAAAATACTCTGATGAATATGTGGAGTCATTAGAGGCTCGTCTTCAGAAGCATGAGGAAGAATTGGCAACTCAACGAAAAGCGAACGAAGACCAACAAATTGCCACCCAAGAACAAATACAAAAAGCATTGGAGGCTCAAAGCCAGGAGTTTAACAGGAAACTTCTCGAAATGCAACAAATGTTTCTTTCGAGGCGAGGAAGTTATCGAATTGTAAAGATTGATGCTACAAGGATGGTGGAGGCTTGGACGTTCGAGAGGATTATTTAG

Protein sequence

MCLKAYHASQGDEKTEEEIMETVLGRRSNYIIGIGYGPKPTRNKGSSSKYSDEYVESLEARLQKHEEELATQRKANEDQQIATQEQIQKALEAQSQEFNRKLLEMQQMFLSRRGSYRIVKIDATRMVEAWTFERII

Homology

[Close]

BLAST of MC11g_new0283 vs. NCBI nr
Match: XP_022143616.1 (uncharacterized protein LOC111013476 [Momordica charantia])

HSP 1 Score: 177 bits (448), Expect = 3.56e-53
Identity = 95/113 (84.07%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 3   LKAYHASQGDEKTEEEIMETVLGRRSNYIIGIGYGPKPTRNKGSSSKYSDEYVESLEARL 62
           LKAYHASQGDEKTEEEIMETVLG+RSNY+IG+GYGPKPTRNKGSSSKYSDEYVESLEARL
Sbjct: 110 LKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLEARL 169

Query: 63  QKHEEELATQRKANEDQQIATQEQIQKALEAQSQEFNRKLLEMQQMFLSRRGS 115
           QKHEEE+A            TQEQIQKALEAQSQEFNRKLLEMQQMFLS  GS
Sbjct: 170 QKHEEEMAR----------TTQEQIQKALEAQSQEFNRKLLEMQQMFLSGGGS 212

[Close]

BLAST of MC11g_new0283 vs. NCBI nr
Match: XP_022148911.1 (uncharacterized protein LOC111017461 [Momordica charantia])

HSP 1 Score: 177 bits (450), Expect = 5.65e-53
Identity = 96/119 (80.67%), Postives = 101/119 (84.87%), Query Frame = 0


Query: 3   LKAYHASQGDEKTEEEIMETVLGRRSNYIIGIGYGPKPTRNKGSSSKYSDEYVESLEARL 62
           LKAYHASQGDEKTEEEIMETVLG+RSNY+IG+GYGPKPTRNKGSSSKYSDEYVESLEARL
Sbjct: 115 LKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLEARL 174

Query: 63  QKHEEELATQRKANEDQQIATQEQIQKALEAQSQEFNRKLLEMQQMFLSRRGSYRIVKI 121
           QKHEEE+A            TQEQIQKALEAQSQEFNRKLLEMQQMFLS  GS    K+
Sbjct: 175 QKHEEEMAR----------TTQEQIQKALEAQSQEFNRKLLEMQQMFLSGGGSSSTSKV 223

[Close]

BLAST of MC11g_new0283 vs. NCBI nr
Match: XP_022153681.1 (uncharacterized protein LOC111021138 [Momordica charantia])

HSP 1 Score: 78.2 bits (191), Expect = 3.62e-15
Identity = 36/38 (94.74%), Postives = 37/38 (97.37%), Query Frame = 0


Query: 3   LKAYHASQGDEKTEEEIMETVLGRRSNYIIGIGYGPKP 40
           LKA HASQGDEKTEEEIMETVLGRRSNYIIG+GYGPKP
Sbjct: 110 LKANHASQGDEKTEEEIMETVLGRRSNYIIGMGYGPKP 147

[Close]

BLAST of MC11g_new0283 vs. NCBI nr
Match: KAG5572499.1 (hypothetical protein H5410_062265 [Solanum commersonii])

HSP 1 Score: 53.1 bits (126), Expect = 7.20e-06
Identity = 27/69 (39.13%), Postives = 43/69 (62.32%), Query Frame = 0


Query: 3  LKAYHASQGDEKTEEEIMETVLGRRSNYIIGIGYGPKPTRNKGSSSKYSDEYVESLEARL 62
          LKA + S     T +EI++ +LG++S YI G+GYGPKP  N+ +  + ++     LE  L
Sbjct: 4  LKALYTSGESSMTIDEIVDAILGKKSGYIKGLGYGPKPNTNRATQRRTAE-----LEDSL 63

Query: 63 QKHEEELAT 71
          +K +EE A+
Sbjct: 64 RKTKEEAAS 67

[Close]

BLAST of MC11g_new0283 vs. NCBI nr
Match: KAG5576495.1 (hypothetical protein H5410_056629 [Solanum commersonii])

HSP 1 Score: 53.5 bits (127), Expect = 2.47e-05
Identity = 26/62 (41.94%), Postives = 40/62 (64.52%), Query Frame = 0


Query: 3   LKAYHASQGDEKTEEEIMETVLGRRSNYIIGIGYGPKPTRNKGSSSKYSDEYVESLEARL 62
           LKA + S     T +EI++ +LG++S YI G+GYGPKP  N+ +  + + E  +SLE R 
Sbjct: 155 LKALYTSGESSMTIDEIVDAILGKKSGYIKGLGYGPKPNTNRATQRR-TTELEDSLERRR 214

Query: 63  QK 64
           +K
Sbjct: 215 RK 215

[Close]

BLAST of MC11g_new0283 vs. ExPASy TrEMBL
Match: A0A6J1CQT5 (uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013476 PE=4 SV=1)

HSP 1 Score: 177 bits (448), Expect = 1.73e-53
Identity = 95/113 (84.07%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 3   LKAYHASQGDEKTEEEIMETVLGRRSNYIIGIGYGPKPTRNKGSSSKYSDEYVESLEARL 62
           LKAYHASQGDEKTEEEIMETVLG+RSNY+IG+GYGPKPTRNKGSSSKYSDEYVESLEARL
Sbjct: 110 LKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLEARL 169

Query: 63  QKHEEELATQRKANEDQQIATQEQIQKALEAQSQEFNRKLLEMQQMFLSRRGS 115
           QKHEEE+A            TQEQIQKALEAQSQEFNRKLLEMQQMFLS  GS
Sbjct: 170 QKHEEEMAR----------TTQEQIQKALEAQSQEFNRKLLEMQQMFLSGGGS 212

[Close]

BLAST of MC11g_new0283 vs. ExPASy TrEMBL
Match: A0A6J1D6S9 (uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017461 PE=4 SV=1)

HSP 1 Score: 177 bits (450), Expect = 2.74e-53
Identity = 96/119 (80.67%), Postives = 101/119 (84.87%), Query Frame = 0


Query: 3   LKAYHASQGDEKTEEEIMETVLGRRSNYIIGIGYGPKPTRNKGSSSKYSDEYVESLEARL 62
           LKAYHASQGDEKTEEEIMETVLG+RSNY+IG+GYGPKPTRNKGSSSKYSDEYVESLEARL
Sbjct: 115 LKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLEARL 174

Query: 63  QKHEEELATQRKANEDQQIATQEQIQKALEAQSQEFNRKLLEMQQMFLSRRGSYRIVKI 121
           QKHEEE+A            TQEQIQKALEAQSQEFNRKLLEMQQMFLS  GS    K+
Sbjct: 175 QKHEEEMAR----------TTQEQIQKALEAQSQEFNRKLLEMQQMFLSGGGSSSTSKV 223

[Close]

BLAST of MC11g_new0283 vs. ExPASy TrEMBL
Match: A0A6J1DLF1 (uncharacterized protein LOC111021138 OS=Momordica charantia OX=3673 GN=LOC111021138 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.75e-15
Identity = 36/38 (94.74%), Postives = 37/38 (97.37%), Query Frame = 0


Query: 3   LKAYHASQGDEKTEEEIMETVLGRRSNYIIGIGYGPKP 40
           LKA HASQGDEKTEEEIMETVLGRRSNYIIG+GYGPKP
Sbjct: 110 LKANHASQGDEKTEEEIMETVLGRRSNYIIGMGYGPKP 147

[Close]

BLAST of MC11g_new0283 vs. ExPASy TrEMBL
Match: M1DNT9 (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.76e-06
Identity = 28/69 (40.58%), Postives = 43/69 (62.32%), Query Frame = 0


Query: 3   LKAYHASQGDEKTEEEIMETVLGRRSNYIIGIGYGPKPTRNKGSSSKYSDEYVESLEARL 62
           LKA + S     T +EI++ +LG++S YI G+GYGPKP  N+ +  + ++     LE  L
Sbjct: 125 LKALYTSGESSMTIDEIVDAILGKKSGYIKGLGYGPKPNTNRATQRRIAE-----LEDSL 184

Query: 63  QKHEEELAT 71
           QK +EE A+
Sbjct: 185 QKMKEEAAS 188

[Close]

BLAST of MC11g_new0283 vs. ExPASy TrEMBL
Match: A0A2G2ZYJ8 (Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_09152 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 8.60e-05
Identity = 26/69 (37.68%), Postives = 42/69 (60.87%), Query Frame = 0


Query: 3  LKAYHASQGDEKTEEEIMETVLGRRSNYIIGIGYGPKPTRNKGSSSKYSDEYVESLEARL 62
          LKA + S     T +EI++ VLG +S YI G+GYGPKP     ++++ +   +  LE  L
Sbjct: 8  LKALYTSGESSMTIDEIVDVVLGTKSGYIKGLGYGPKP-----NTTRETQRIMAELEDSL 67

Query: 63 QKHEEELAT 71
          +K ++E A+
Sbjct: 68 EKAKQEAAS 71

The following BLAST results are available for this feature:

BLAST of MC11g_new0283 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g_new0283 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143616.1	3.56e-53	84.07	uncharacterized protein LOC111013476 [Momordica charantia]	[more]
XP_022148911.1	5.65e-53	80.67	uncharacterized protein LOC111017461 [Momordica charantia]	[more]
XP_022153681.1	3.62e-15	94.74	uncharacterized protein LOC111021138 [Momordica charantia]	[more]
KAG5572499.1	7.20e-06	39.13	hypothetical protein H5410_062265 [Solanum commersonii]	[more]
KAG5576495.1	2.47e-05	41.94	hypothetical protein H5410_056629 [Solanum commersonii]	[more]

BLAST of MC11g_new0283 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQT5	1.73e-53	84.07	uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1D6S9	2.74e-53	80.67	uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1DLF1	1.75e-15	94.74	uncharacterized protein LOC111021138 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
M1DNT9	3.76e-06	40.58	Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1	[more]
A0A2G2ZYJ8	8.60e-05	37.68	Uncharacterized protein OS=Capsicum annuum OX=4072 GN=T459_09152 PE=4 SV=1	[more]

BLAST of MC11g_new0283 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 55..82
None	No IPR available	COILS	Coil	Coil	coord: 88..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g_new0283.1	MC11g_new0283.1	mRNA