MC11g_new0277 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g_new0277
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC11: 11343615 .. 11345782 (-)
RNA-Seq Expression	MC11g_new0277
Synteny	MC11g_new0277

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGGAGGTTTGGCGCTGTGGGACGGTGTGAATGAGCTGTTGTGGTTGGATTTGGGAGAGATTTGAAGAGTGAGAAGAACAAGGGAGAGAAAGAGGTAATAGAAAAATTAGAGAGAGAGAGTAGTAGTGGATTTTCATTCATACCGCTCCACTTTACCATTTTCTTTTGAGCTCCTCGTCCCTCATTGAAGAGAAATTAAATCTCTTTCTCAGGATAAGTAAGGTGGGTTGCTCAAATAAAGTTAGAGATTAAAGAGAAAAAGTTAAGGATCGAAAGAAAAAGCTCAACAAATGTTTAATTGTTTCTTTATGTTACCACCTGACTATGCTTGGTGTACTCTCTCTATTGTCTTTTCTGCTATAGTTGGGAGTTAGTAAGGAAGTAGTTCATCTACTCCCTTGTGTTTTCTTGAAAGCTTTTACTTCCTCTTCTCCTCTTTGTCTATTTATTCGTTATGTATTCTTTCTCTAAAACATTTGAATACAATCACAAAGTGTTAAAAGAAAAACTCTCTGGCTTTCCATCTTCTTGAATATTCAAACTCAAACTTAGTATCAGAGCATCAATATGGCTTACCCAAATCCTAAACCCAATCCCACAGATGTTCCTGTCCATGTTACCAAGCCCCAGGGAGTCATAGAAGTGCGATCTGGTACTATCCCAGTTGGAAACCCACTCTTTGCAACCTTATTGAATCAAGCCTCATAAGCTTGAGGGACACCACACTGGAAAAAGCCCAGCACCAGAAATATCCATTGTTATTTCTCCAACTGAAGAGGAACCTGAAGGCCTTCTGCTACCAAATCCGGAATATGATGTATGGGATGCTGCAAATCAACTACTTGTTGGATGGCTCTACAACTCAATGACCCCAGAGGTTGCATCCCAAGTCACAAATTGTAACATTGCTCAAGAACTTTGGACCGCCCTTCAGGACTTCTATCGTGTTCAAGCCACCTCTCAAAAAGATTTTATCAAGAGCACGATGCAAAAAACTCGAAAAGGGGGTATGAAAATGGCCTATTATCTAAGTTTAATGAAAGGTTATGCTGATAGTTTGCATTTGGCAGGTTATCCAACGGAAATGAAAGACCTCATCTCTTGTGTCATAGCTGGACTTAGAAGTACACGCCCATTGTGGTTGTTATAAAAAACATGAAGCTGAATTGGAATGAAGTCCAATCTCAACTGCTCACTTTCGAGATGCATCAGGCACAATTTCAAGCCTTAAAAAATGTGGTTCCATCACTCAACCCTCTGCTAATATTGCTACTAATAGCACACCAATAAACAGCCTCACTCACAGACCAAGAACCACAATAGCAACTTCAACAAGGGCTATAGAGGATTTGGCAAGGGGAGAAACTTTGGAAACTCTAAACCAATCTTTCAGGTACGGTGTCTGGTAAGGTTGGTCATACTGCAGCAGTTTGCTACTTCCGTTTTAAGAGAAATTTTCATCCTAATCAGAATTTCAGCAAGGGGGAAGTTCTTCCTATTCAAAACAACATTCTGGCAATTCTTCAGCTATGCTTGCTACTCCAGAAACTCTTCATGACAATGCTTGGTATTTAGACAATGGTGCTAGCAGTCATTTGACATCAGATATTGGCAATCTATCCATCAAGACTGATATACAGGTATGGCACGAATTACTGTTGGAAATGGTTCTCAAATTCCTATACAATCCATTGGTAGTTCTGTTATTCCATCAAATATGAGAAACTTAGTCTTGAAGGATTTATTGCATGTTCCTCGTATTAGCAAAAATAACATTTCCCATTTGACTATGGATAACTCTGCAATAGTTGAATTTCATGAGCCTTTTGTGCCGTTAAGGACAAGGTCACGGGGAAGGTTCTTCTGGAAGGAATGCTTAAGGATGGACTGTACCAGATTCCTCAATTCAAAGCCTCATCTCATGCTTTTGGTCAAGAATATCCATGGAAACGGTTTGTTTTTGTTGCTTTTGTTTCTACGATGACAAAGAAAAATCAGGATGATGTGTTGTTAGTTACATCTCCTGTTAGTCATCACATTTTGTATCGCTTTAAGAATGTATGACTTAGTAGGCTTGGACATCTGTCTCCTAGAATTTTGAATCATATCTTGACCTCTTGTAATCTGAAAAACAGAATAAATGAGAAATTATCCTTTTGTGAAGCTA

mRNA sequence

ATGACCCCAGAGGTTGCATCCCAAGTCACAAATTGTAACATTGCTCAAGAACTTTGGACCGCCCTTCAGGACTTCTATCGTGTTCAAGCCACCTCTCAAAAAGATTTTATCAAGAGCACGATGCAAAAAACTCGAAAAGGGGGTTATCCAACGGAAATGAAAGACCTCATCTCTTGTGTCATAGCTGGACTTAGAAGTACACGCCCATTGTGGTTGTTATAA

Coding sequence (CDS)

ATGACCCCAGAGGTTGCATCCCAAGTCACAAATTGTAACATTGCTCAAGAACTTTGGACCGCCCTTCAGGACTTCTATCGTGTTCAAGCCACCTCTCAAAAAGATTTTATCAAGAGCACGATGCAAAAAACTCGAAAAGGGGGTTATCCAACGGAAATGAAAGACCTCATCTCTTGTGTCATAGCTGGACTTAGAAGTACACGCCCATTGTGGTTGTTATAA

Protein sequence

MTPEVASQVTNCNIAQELWTALQDFYRVQATSQKDFIKSTMQKTRKGGYPTEMKDLISCVIAGLRSTRPLWLL

Homology

[Close]

BLAST of MC11g_new0277 vs. NCBI nr
Match: KGN44003.1 (hypothetical protein Csa_016232 [Cucumis sativus])

HSP 1 Score: 54.7 bits (130), Expect = 1.55e-07
Identity = 25/57 (43.86%), Postives = 40/57 (70.18%), Query Frame = 0


Query: 1  MTPEVASQVTNCNIAQELWTALQDFYRVQATSQKDFIKSTMQKTRKGGYPTEMKDLI 57
          MTPEVA Q+   N A++LW A+QD + VQ  +++DF++ T Q T+KG   ++M+D +
Sbjct: 1  MTPEVALQLMGFNTAKDLWEAIQDLFGVQLRAEEDFLRHTFQTTQKGN--SKMEDYL 55

[Close]

BLAST of MC11g_new0277 vs. NCBI nr
Match: XP_031745012.1 (uncharacterized protein LOC116405217 [Cucumis sativus])

HSP 1 Score: 53.5 bits (127), Expect = 1.45e-06
Identity = 23/47 (48.94%), Postives = 34/47 (72.34%), Query Frame = 0


Query: 1   MTPEVASQVTNCNIAQELWTALQDFYRVQATSQKDFIKSTMQKTRKG 47
           MTPEVA Q+   N A++LW A+QD + VQ  +++DF++ T Q T+KG
Sbjct: 107 MTPEVALQLMGFNTAKDLWEAIQDLFGVQLRAEEDFLRHTFQTTQKG 153

[Close]

BLAST of MC11g_new0277 vs. NCBI nr
Match: XP_038887140.1 (uncharacterized protein LOC120077331 [Benincasa hispida])

HSP 1 Score: 52.4 bits (124), Expect = 8.38e-06
Identity = 21/52 (40.38%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 1   MTPEVASQVTNCNIAQELWTALQDFYRVQATSQKDFIKSTMQKTRKGGYPTE 52
           MTPEV  QV  C  A++LWT++Q  + +Q+  ++D+++   Q+TRKG    E
Sbjct: 64  MTPEVTIQVMGCGCAKDLWTSIQQLFVLQSRVEEDYLRHVFQRTRKGNLKME 115

[Close]

BLAST of MC11g_new0277 vs. NCBI nr
Match: XP_016902205.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo])

HSP 1 Score: 52.8 bits (125), Expect = 8.50e-06
Identity = 26/63 (41.27%), Postives = 41/63 (65.08%), Query Frame = 0


Query: 1   MTPEVASQVTNCNIAQELWTALQDFYRVQATSQKDFIKSTMQKTRKGGYPTEMKDLISCV 60
           MTP+VA Q+      ++LW A QDF+ VQ+ +++DF++  +Q TRKG    E+ +L+  V
Sbjct: 123 MTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKG--LDEVYNLVIVV 182

Query: 61  IAG 63
           I G
Sbjct: 183 IQG 183

[Close]

BLAST of MC11g_new0277 vs. NCBI nr
Match: XP_016902204.1 (PREDICTED: uncharacterized protein LOC107991581 isoform X4 [Cucumis melo])

HSP 1 Score: 52.8 bits (125), Expect = 8.76e-06
Identity = 26/63 (41.27%), Postives = 41/63 (65.08%), Query Frame = 0


Query: 1   MTPEVASQVTNCNIAQELWTALQDFYRVQATSQKDFIKSTMQKTRKGGYPTEMKDLISCV 60
           MTP+VA Q+      ++LW A QDF+ VQ+ +++DF++  +Q TRKG    E+ +L+  V
Sbjct: 123 MTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKG--LDEVYNLVIVV 182

Query: 61  IAG 63
           I G
Sbjct: 183 IQG 183

[Close]

BLAST of MC11g_new0277 vs. ExPASy TrEMBL
Match: A0A0A0K3F9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G091720 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 7.51e-08
Identity = 25/57 (43.86%), Postives = 40/57 (70.18%), Query Frame = 0


Query: 1  MTPEVASQVTNCNIAQELWTALQDFYRVQATSQKDFIKSTMQKTRKGGYPTEMKDLI 57
          MTPEVA Q+   N A++LW A+QD + VQ  +++DF++ T Q T+KG   ++M+D +
Sbjct: 1  MTPEVALQLMGFNTAKDLWEAIQDLFGVQLRAEEDFLRHTFQTTQKGN--SKMEDYL 55

[Close]

BLAST of MC11g_new0277 vs. ExPASy TrEMBL
Match: A0A1S4E2K3 (uncharacterized protein LOC107991581 isoform X5 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.12e-06
Identity = 26/63 (41.27%), Postives = 41/63 (65.08%), Query Frame = 0


Query: 1   MTPEVASQVTNCNIAQELWTALQDFYRVQATSQKDFIKSTMQKTRKGGYPTEMKDLISCV 60
           MTP+VA Q+      ++LW A QDF+ VQ+ +++DF++  +Q TRKG    E+ +L+  V
Sbjct: 123 MTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKG--LDEVYNLVIVV 182

Query: 61  IAG 63
           I G
Sbjct: 183 IQG 183

[Close]

BLAST of MC11g_new0277 vs. ExPASy TrEMBL
Match: A0A1S4E1U9 (uncharacterized protein LOC107991581 isoform X4 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.24e-06
Identity = 26/63 (41.27%), Postives = 41/63 (65.08%), Query Frame = 0


Query: 1   MTPEVASQVTNCNIAQELWTALQDFYRVQATSQKDFIKSTMQKTRKGGYPTEMKDLISCV 60
           MTP+VA Q+      ++LW A QDF+ VQ+ +++DF++  +Q TRKG    E+ +L+  V
Sbjct: 123 MTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKG--LDEVYNLVIVV 182

Query: 61  IAG 63
           I G
Sbjct: 183 IQG 183

[Close]

BLAST of MC11g_new0277 vs. ExPASy TrEMBL
Match: A0A1S4E1V2 (uncharacterized protein LOC107991581 isoform X3 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.27e-06
Identity = 26/63 (41.27%), Postives = 41/63 (65.08%), Query Frame = 0


Query: 1   MTPEVASQVTNCNIAQELWTALQDFYRVQATSQKDFIKSTMQKTRKGGYPTEMKDLISCV 60
           MTP+VA Q+      ++LW A QDF+ VQ+ +++DF++  +Q TRKG    E+ +L+  V
Sbjct: 123 MTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKG--LDEVYNLVIVV 182

Query: 61  IAG 63
           I G
Sbjct: 183 IQG 183

[Close]

BLAST of MC11g_new0277 vs. ExPASy TrEMBL
Match: A0A1S4E1U6 (uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC107991581 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 4.31e-06
Identity = 26/63 (41.27%), Postives = 41/63 (65.08%), Query Frame = 0


Query: 1   MTPEVASQVTNCNIAQELWTALQDFYRVQATSQKDFIKSTMQKTRKGGYPTEMKDLISCV 60
           MTP+VA Q+      ++LW A QDF+ VQ+ +++DF++  +Q TRKG    E+ +L+  V
Sbjct: 123 MTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKG--LDEVYNLVIVV 182

Query: 61  IAG 63
           I G
Sbjct: 183 IQG 183

The following BLAST results are available for this feature:

BLAST of MC11g_new0277 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g_new0277 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44003.1	1.55e-07	43.86	hypothetical protein Csa_016232 [Cucumis sativus]	[more]
XP_031745012.1	1.45e-06	48.94	uncharacterized protein LOC116405217 [Cucumis sativus]	[more]
XP_038887140.1	8.38e-06	40.38	uncharacterized protein LOC120077331 [Benincasa hispida]	[more]
XP_016902205.1	8.50e-06	41.27	PREDICTED: uncharacterized protein LOC107991581 isoform X5 [Cucumis melo]	[more]
XP_016902204.1	8.76e-06	41.27	PREDICTED: uncharacterized protein LOC107991581 isoform X4 [Cucumis melo]	[more]

BLAST of MC11g_new0277 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K3F9	7.51e-08	43.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G091720 PE=4 SV=1	[more]
A0A1S4E2K3	4.12e-06	41.27	uncharacterized protein LOC107991581 isoform X5 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4E1U9	4.24e-06	41.27	uncharacterized protein LOC107991581 isoform X4 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4E1V2	4.27e-06	41.27	uncharacterized protein LOC107991581 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4E1U6	4.31e-06	41.27	uncharacterized protein LOC107991581 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of MC11g_new0277 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g_new0277.1	MC11g_new0277.1	mRNA