MC11g_new0229 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g_new0229
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC11: 9450757 .. 9455467 (-)
RNA-Seq Expression	MC11g_new0229
Synteny	MC11g_new0229

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTCAATCCGCAAACTCGACCAATACGGCAGATCGAAGGACCCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTTGGAGCAGCAGTGGTAGAGGGGCAAGGTCACGACGGCCTAGCAACAGAACCCCTCCGCAGGTCGGCACGAATCACCGCACCTGTTCTACCACCTGCGCACCCCCCAAGGACATCCAAGGCCACCCGTGGCCGAGGTGGAACCTCTAAGAAGGGCGCCCGGGGTCCAGCCCCGGCCCCGACAAGTGAGAACTTGGACGCACTCCAGGGAGAAATGGAGGCAATGCGCACGAAAATGCGGTCCATGGAGGAAATGTATAACGAAATGATATTAGCTGCAGGCGCAGGGTCCCGATCTGAGAACCGAGTGACGCGCGTTGGCATACGCGAGCAAAGGGGTTCCCACCTCGGCCCAGTCGAGGAGGAACATCCCAAAGACAACGAGAGCGAGGGACACACTCGCCAGAGAGGAGACCTCCGTGAACACCTCAACAGAAAGAGAGGCTCATCTCTCCGAAAAGGACAGTCACCATCCCGCTCACACAGGAGCTCCAACCAGCAGGCTGAATCCTCTCGCAACCCAGTAACTCCTGCAAGAGTGATTACAAGGGAGGAGTTCGACCAGCTGAGGGGCCAGCTCGACGCCCAGGTGGAGGCTTTAAAGGCCAAATGTGAGTAGAAAGAAGGTCCACTGAACGATGGCGACTTGGGAGAATCGCCCTTCACCTCGGACGTTTTGGAAGCACCGATCCCTCCGAAGTTCAAAGCTCCTACCGTGAAACCTTATGATGGGTCGAAGGACCCCAAGGATTATGTTGAGGTCTTTGAAGGCCTCATGGATTTCCAAGCGGCATCAGACGCAATCAAATGCCGCGCCTTTCAGATCGCGCTTACTGGCAGCGCGCGATTGTGGTATCGGAGACTGCCAGCCAGGTCGATCTCGACCTACTCTCAGCTGAGAAGGGAGTTCCTCGCCCAGTTCTCTTCTCGGCATTATGACAAAAAGACAGCGACCCATCTCGCCACCATCAGACAGAAGGAGGGTGAGACGCTGCGAGAATATGTCATCAGATTCCAGGAGGAGCAATTGAAGGTCGCACACTGCTCCGATGACTCGGCCATGTGCTATTTTCTCACCGGTCTAGCCGACGAAGCCCTCACGGTGAAACTTGGAGAGGAGGCCCCGGCCACCTTCGCCGAGGTGCTTCAGAAGGCGAAGAAAGTCATCGATTGACAGGAGCTCCTCCGAACCAAAACCGGCCGACCAGAACGAAAGATCGGCCGGGGCAGAAGTGGAAAAGATATAGAAAAGGCAGATCCCAAGTCCAAGGACAAGGGATCCTTTTCCAGCGGCCGAGCTGAGTATCGGAGGGCGGAGAACGGACCTACCAGGAGCCGACCTTACGAACGCTTCACCCCGACCACGATTCCAATTTCCAGGATCCTAACGAACATCGAGGAGTCTGGAATGGAAAAACTACTCAAACGTCCTGAGAAGCTTCGGGGAGCCCCGGAGAGGCGCAACAAGGACAAGTATTGCCGCTTCCATCGGGAGCACGGCCATAACACGTCGGACTGCTGGGAGTTGAAGCGCCAAATTGAGGATCTAATTCAAGATGGCTACTTCAAGAAATTTGTGGGAAAGCCCAGGACCAGCTCGGCAGAGAAAAAGGAAGAGCGGAAGCGTTCGAGGACGCCGCCCCGGCGCACTGACCGACCTGCAGTCATCAATACCATTTTCGGAGGGCCAAGCGGGGGTCAGTCCGGACATAAAAGAAAGGAGTTAGCTTGTGCAGCCAGACGCGAGGTGTGCATCATCAGGGAGTAGAGGCCGACCTGCTCAATCACCTTCGACGGTGTAGACTTGAAGGAGGTCCACCTGCCCCACAATGATGCACTTGTGATCGCTCCCTTGATTGATCATGTGGTGGTCAGGAGGGTGCTGGTAGACGGAGGCGCATCTGCTAACATCCTGTCCTTACCGACCTACCTCGCCCTGGGATGGACGAGGTCGCAATTGACGAAAAGCCCGACACCGCTGGTTGGGTTCTCTGGAGAATCGGTCATCCCAGAGGGTTGCATCGACTTGCCGGTCACGCTTGGGCAGGACCAAACTCGGGTCACCCAAATGGCCGAGTTCGTGGTGATTGACGGTAGATCGGCCTATAATGCCATCTTTGGGAGACCCATCATCCACTCATTTCGGGCCATTCCCTCGACACTTCATCAAGTTTTGAAGTATTCCACCCCCAATGGCGTGGGCACGGTCCGAGGAGAACAGACCGCTTCAAGGGAGTGCTATGCCTCCGCACTCAAAGGCTCATCGGTCTGCGCCCTTGAAACTCTCACCAGTAGGGATGGGACGCTCGAGTTCAAGGCCGACCTGCCGAGGAGGGAGTTTGCCGCACCCACTGAGGAGCTCGAGCTTGTTCCTCTGCTTAGTCCCGAGAAGCAAGTAAGCATAGGAACCAAACTGGGGGCCACCGACAGAGAGGAGTTAATCCACTTCCTCAGATCCAACTCGGACGTCTTTGCGTGGTCCCATGAGGACACGCCTGGCATTGACCCGAAAATTATGACGCATCGCCTCAGCATAGATCCGTCATTTCGACCTGTAAAACAAAAAAGAAGACCTATAAACAAGGAGAGGAGTGACGTAATTGTTGAGGAAGTTAGCAAACTTTTGAAAGCTAAATACATAAGAGAAATTTCGTATCCCGAGTGGCTCTCCAATGTTGTATTAGTTAAAAAATCTAACGGAAAGTGGAGAATGTGCGTAGATTTTACGAACTTAAATAAGGCATGCCCGAAAGATTGCTTCCCACTGCCGAGGATTGATCAGCTCGTGGACGCCACAGCCGGGCATGAACTGCTCACCTTCATGGACGCCTACCATGGGTACAACCAAATCAAGATGCATGTCCCAGATCAAGATCATACCGCATTCATAACAGACCAAGGTCTGTACTGTTACAAGGTCATGACCTTCGGTTTAAAGAACGCAGGAGCGACCTACCAGAGAATGGTGAACAAAATGTTCGCCAAGCAGATCGGCCGGAATATGGAAGTGTATGTGGACGACATGCTCGTCAAGAGCAAGCGGTCTAAGTCGCATCTTTCCGATCTGACCGAAGCCTTCGAGGTTCTAATGACATATCAAATGAAGTTCAACCCAGCTAAATGTGCCTTTGGAGTCTCTTCGGGGAAATTCCTTGGCTTCATGGTGAACCACCGGGGGATCGAGGCCAACCCCGAAAAGATTAAAACCGTCGCGAGATTAGCGGGACTACCACCCATAAGTAGATGACCTCACTCCACGATCAGGTACGATGATTTCTGACCTCGAATTAAACTGGGAATCCGACCTATACTGACTTGATCGTCGGAGTGCTCACCTTTTTGTGCAGGTCCGCCCAAGTATTCAGATCGGTCCGGAGGCCGAGTTCGAGCCGCAATCTGAAATACACTGTTGTGCATATCCTTGCATAAACAAAACATTTTGTAAATAACTTATGAACATGCTTTCTAGTTTGGTTTTTCTCTCTTACCCGTAGTTAGTCAATAAAATATTTCTAATTGGGTTAATTTTTTTATAAAATATTTTTTAGTACAATAAGTGGGACGGGGATTCGAACCTATGGTCTCTTGGTCAGAAACAAGTGTCAATTACCGTGACCTAAATTTAGGTCGGCAAATTTTTAGAAATTTAACCCTATTTGATAACGTTTTTTCGTTTTCATTTTTTTTTTTAATTTAAGATGGCATTCTCACTATTTTTTATATATTTTTATTTACGTCTCATTTTCAGCTAAACTTCATAGACAAAAATTAAAATTTTTTTTTCTTTTTAAAATTTAGCTTAAATTTTAAAAGAGGAAATAACAAAACTAAAAACCATATGTAATATAGTAGTGATTTATGAACTTAATTTTTAAAATTAGAAAATCAATAATAAAATAATCACAACCAACACCTTAATGAATCAATTTTATCATTAAACTTTTAATTTCATCCCATAAAATCTTAAACTTCAAATAATAGTAACATTAATATATATTTTCAAACCCAAATTAATAAAGTTACTCATTAATTTATGAAAAAAAGAAATCAAACTGAATTTTCAAAATTAAATTAAAAAAAAAAGATTCTTAACCAAACCAGTTTTGTTTGTTAGTAAGATACGAAAAATCCAACTCACCTCTAACAACCAAGCCTATCACGCAACTCAACCGCTACCCAACCAACCCCACAAAACGACACCGTACCGCAATTAATGAATCCCGGATCTTCCCTGACCCGACCCGAGAAACCCCGCCGCAATTAACCGCTAAAACTCTGAAAATGGTGTCGTTTAATCGCAATTAGGGCAGAGAGAGAGAGAGAGAGGAATTGGCGTTGAAAACGATGTGTCGTTCTGGGGGTCGATTGGCAGTTAGGGGTTTGGAGATTTGTTGATTAAAGAATGATGAAGGAAGGGGAAAGCGCGCGATTAATGGCGTTTGGAATCTGTGATAGCGATACGACGACGCTTCTGCTGCACCTGCAGTTTTGTAATTAATGTCGACTGTTACTGCGTGGCCACAGATGTACCCGGAAAGCGGGCGGCTCCGACCGGCGCCGGCGGCGGCTTCGGCTTTCTTTGGTTCCGGCTCCCGGCGGCGTCGGTAGAAGAGTCATTTTCTGGAAAGACGATCTGA

mRNA sequence

ATGGTTCAATCCGCAAACTCGACCAATACGGCAGATCGAAGGACCCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTTGGAGCAGCAGTGGTAGAGGGGCAAGGTCACGACGGCCTAGCAACAGAACCCCTCCGCAGTTTTGTAATTAATGTCGACTGTTACTGCGTGGCCACAGATGTACCCGGAAAGCGGGCGGCTCCGACCGGCGCCGGCGGCGGCTTCGGCTTTCTTTGGTTCCGGCTCCCGGCGGCGTCGGTAGAAGAGTCATTTTCTGGAAAGACGATCTGA

Coding sequence (CDS)

ATGGTTCAATCCGCAAACTCGACCAATACGGCAGATCGAAGGACCCTAGCTGCCAGCGATGCCCACCAGAGGGAGGTTGGAGCAGCAGTGGTAGAGGGGCAAGGTCACGACGGCCTAGCAACAGAACCCCTCCGCAGTTTTGTAATTAATGTCGACTGTTACTGCGTGGCCACAGATGTACCCGGAAAGCGGGCGGCTCCGACCGGCGCCGGCGGCGGCTTCGGCTTTCTTTGGTTCCGGCTCCCGGCGGCGTCGGTAGAAGAGTCATTTTCTGGAAAGACGATCTGA

Protein sequence

MVQSANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPLRSFVINVDCYCVATDVPGKRAAPTGAGGGFGFLWFRLPAASVEESFSGKTI

Homology

[Close]

BLAST of MC11g_new0229 vs. NCBI nr
Match: XP_022152854.1 (uncharacterized protein LOC111020479 [Momordica charantia])

HSP 1 Score: 71.2 bits (173), Expect = 6.61e-12
Identity = 41/64 (64.06%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 1  MVQSANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPL-RSFVINVDCYCVATD 60
          MVQ ANSTNTADRR LAA+  HQREVGA VVEGQGH+ L TEPL RS  I       A  
Sbjct: 1  MVQPANSTNTADRRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAHP 60

Query: 61 VPGK 63
           P K
Sbjct: 61 KPSK 64

[Close]

BLAST of MC11g_new0229 vs. NCBI nr
Match: XP_022159327.1 (uncharacterized protein LOC111025738 [Momordica charantia])

HSP 1 Score: 64.3 bits (155), Expect = 1.73e-09
Identity = 41/73 (56.16%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 1  MVQSANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPL-RSFVINVDCYCVATD 60
          MVQ  +STNT DRR L A+D HQREVGA VVEGQ H+GL TEP  RS  I       A  
Sbjct: 1  MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHP 60

Query: 61 VPGKRAAPTGAGG 72
           P K  A  G GG
Sbjct: 61 KPFK--ANRGRGG 71

[Close]

BLAST of MC11g_new0229 vs. ExPASy TrEMBL
Match: A0A6J1DHB3 (uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020479 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 3.20e-12
Identity = 41/64 (64.06%), Postives = 43/64 (67.19%), Query Frame = 0


Query: 1  MVQSANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPL-RSFVINVDCYCVATD 60
          MVQ ANSTNTADRR LAA+  HQREVGA VVEGQGH+ L TEPL RS  I       A  
Sbjct: 1  MVQPANSTNTADRRALAANHGHQREVGAEVVEGQGHEDLGTEPLCRSARITTPVLPPAHP 60

Query: 61 VPGK 63
           P K
Sbjct: 61 KPSK 64

[Close]

BLAST of MC11g_new0229 vs. ExPASy TrEMBL
Match: A0A6J1DZJ1 (uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025738 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 8.39e-10
Identity = 41/73 (56.16%), Postives = 44/73 (60.27%), Query Frame = 0


Query: 1  MVQSANSTNTADRRTLAASDAHQREVGAAVVEGQGHDGLATEPL-RSFVINVDCYCVATD 60
          MVQ  +STNT DRR L A+D HQREVGA VVEGQ H+GL TEP  RS  I       A  
Sbjct: 1  MVQPVDSTNTGDRRALVANDGHQREVGAEVVEGQIHEGLGTEPFCRSARITTPDLSPAHP 60

Query: 61 VPGKRAAPTGAGG 72
           P K  A  G GG
Sbjct: 61 KPFK--ANRGRGG 71

[Close]

BLAST of MC11g_new0229 vs. ExPASy TrEMBL
Match: A0A6J1CLW9 (uncharacterized protein LOC111012164 OS=Momordica charantia OX=3673 GN=LOC111012164 PE=4 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 5.29e-04
Identity = 24/25 (96.00%), Postives = 24/25 (96.00%), Query Frame = 0


Query: 1  MVQSANSTNTADRRTLAASDAHQRE 25
          MVQ ANSTNTADRRTLAASDAHQRE
Sbjct: 1  MVQPANSTNTADRRTLAASDAHQRE 25

The following BLAST results are available for this feature:

BLAST of MC11g_new0229 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g_new0229 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152854.1	6.61e-12	64.06	uncharacterized protein LOC111020479 [Momordica charantia]	[more]
XP_022159327.1	1.73e-09	56.16	uncharacterized protein LOC111025738 [Momordica charantia]	[more]

BLAST of MC11g_new0229 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DHB3	3.20e-12	64.06	uncharacterized protein LOC111020479 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A6J1DZJ1	8.39e-10	56.16	uncharacterized protein LOC111025738 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1CLW9	5.29e-04	96.00	uncharacterized protein LOC111012164 OS=Momordica charantia OX=3673 GN=LOC111012...	[more]

BLAST of MC11g_new0229 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g_new0229.1	MC11g_new0229.1	mRNA