MC11g_new0167 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g_new0167
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	60S ribosomal protein L18a-like protein
Location	MC11: 6575455 .. 6578415 (+)
RNA-Seq Expression	MC11g_new0167
Synteny	MC11g_new0167

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACCAATCACTAATTGAAGTTGCAATGAAAATGACGCTAGGAAAATTATTCAATATGGGCTAAAACTGTTAATCATATTGTACGAATCAATTTATCGTGACATTTACACTGACACTAACTCTACCTATTATCATTATACTTTTCTTAATTTCTTGAATTTTAGTTCTATGGGGCAAAAAGTCGAACTCCGACGTCTTAATTAAAGATATATGTCCTGAACCCTGGTCAAATTGGCCGTGGTTTCTAAATTGTTCCATTTTGGTTTGATAAAATATTATTTTAATAGAACCCCCGGGCCCTGGCCGCGCATTCTGATCCATTTCGGCATTCGGGTCTTCTTCTGGAGAGAGAGACACAGACAGAGCCGACGGTGAGTCCAAAAAATGAGCCAGGAGGAGAAAGCCGCCGCCGCCGCAGGGGTCGTCGTCCACCACCATCACGAATCCAATTCCGGCCACCCTCAGTACGGCACCTTCCAAGGCGTCGCCAATTATCCTCCGGTCGGATTTCCCCAGCCTATTCGCCCACCCGGCGCCTCTGACTCCTATGATCCTTCTCAATCTCAGCCCTACGCTCATGCCTATCAAGCTGTCCCTGGTAACCTCTTCTTCCTCAATTTTCCTTACTGTTTTTTGCCTGCTATTCGTTGTTTCTCTTTGGCTCTTGTGCAATTTCTTCGATCTAATGCTTTTCCGTTTGACTCGAACTACTGATTTCTGTTGCTCGGTCAAGTGCTTTGAGTTGAACTTGATTCTTGCCGAAGTAGCTCAAACTGGATGAGATTTTAAAGACGAGATGTATGAACACTTGCGTCCTAAACTTGATCTTACTTGAGTAACTTAGTTCTGTCCGGAAGCAAAATTATGATCTAATGAATGGTTATGTGCCAGAAATGAACGAGTGGAGTTAGTCATATATTCTTGATTCTCTGTATTTCAATTCAAATTCAACCTTCAGCTTCCTACTGCTACCAGGTGTTTGAGATTAGATCTCGCCTTTTCTTGTTCTGTGAATGTGCTTTACCTTGGTTTCTGCTTCGAAGTTTACAGTTCAAAATTGAAAAATAAGTAGGAAGCCACTTTCAACTCATTGTAAACAAAGATCGCAATAACATATAATAGTTTATCAATTGTTTAATTTGAAGCTTTTTGGTATAACGAAATATCGACAAAAAGTTTGGCAGGATTCTTACTTATAGACACGCGACTCTCTTTAAACTAAAAAATACTTGATTTTATCATTCTGAAATTCGCATGCTCTTTCCTTTTTGCATCTTAAGAAGAATATACGGAAATGAATGTCACCTTTTTATATATTTGCGTTGCGTGACAACTATTTTGTCATGTGTCTTATGTTCTGTCACTTTGTCATATTAACACTTTGTATCTCTCTCTTGAAGGAGAATCATCGTAAGATTTGATGTTATACTATTAAATTACGTTCAATATCATTGTATTTGGCTAGTGCTTCGTCTGACTTTTTTCTGAAATATGTACTATTGGCTTTGCTTAATATATCACTTATCAGTACACAGACATAAGTATTAGCTCAAGCTTTTTTTCTTCTAATTCTTTTCCAGGATATGCTATTGTCGAAGGAAGACCAGTGAGAGAGAGACGCCTTCCTTGCTGTGGTATTGGCATTGGGTGGTTCCTGTAAGTAGCTATAATTGTTGCAATTTACCAACATTTATGGAAAGTTACATTAGCATTGTTGTTAACAAGCCAGGTGAAACGGTTATGCCCACAGTTAAAATTTTCAGAGGTTACATGGTCAATGAATTATCATTTCAGAGGATTAGATGCTACAAATTCCATGTTATGAGCTAAAACCCGTCAGTGTCTAGATTGGAATGACATAGTTGCTACTTGCGTACTGCCTACTATTTATATCTTGCTATAGAAACTTTTTGCCCAGATTTTGCGTCTATAAATAACTGACCAGACAGGTTACTATCTGTGTTCGTAAGGTTCATTATTGGTTTCTTCATTGTTGGCATCCCGTGGTATGCTGGGGCAATTGTCATACTATGTGGCAGGGTAGACTACCGCGAGAAACCTGGATATGTTGCCTGCACAATTGCTGTGAGTAGCTTTTATTCCCCGTTCATTTTGGCTTTTTCAGATTCATGATGATGTTCTTATATCTTCAATCTAAATTTGCAATTCGTAAAAGAAGTGATTTTTGTGTTATACTTTTTTGCAACTTGCCAAAAATATAGATGTTTTGGCAAGTTCTCTGTTCAATAAAGATTTTGTTTAGTGAATTAAGGTTGTTTATTTACACTTTCTTTGTTTGGTTTTTATTTGAAATCTTAATCATAACAAGTGTTTACGTTCATCTACTTTTTTCAGTTTTGTTTTGAAAAAAGTTTAACTATATCTTTACATTCAACGTTAATGATATTACATTGTGTATCAGGCTATTCTTGGCACACTTGCACTTATTCTTGGCGTAACGAAGGGAGTTGATGTCTGGTAAACAAATCCTAAACTAAAAAGTGTTGTATAGTTTGCAAATATGTATGAACAACACAACCCATGATTTCTCAGCACCACATCTTCAAGCTAGTTCCACAGAAACCTGAATTTGTGAGAGCATAAAATTATTAGTTAGCGGTTGTTTCCCATGTTGTACCTAAGAACTGCAGCATTCTGCAAAATCATGCTATTTCTTTTTCTTTTTCCCATGATTGTGTCCAAATATGTGTTTTGATTATTCATCTGAAACCCCTTTGTCAGAGTGTACTTGTCCTTTGGTAAATATATTTATTATTGTTGTTTGGAAAAAACATTTGAATATCAGAATAGAACTGTTTCTTACTGATCATCAGATCGTTCCCCTAGCGAAGAAGTTGCCCAGCCTGATGATCTTTCCAGGTAAATTTTGTTATTCATCACCATGTATGTAAGGTAGGAAGTTCTATTGATTTGGTAGTAAATAAAACTTCTTCAAAGAGG

mRNA sequence

ATGAGCCAGGAGGAGAAAGCCGCCGCCGCCGCAGGGGTCGTCGTCCACCACCATCACGAATCCAATTCCGGCCACCCTCAGTACGGCACCTTCCAAGGCGTCGCCAATTATCCTCCGGTCGGATTTCCCCAGCCTATTCGCCCACCCGGCGCCTCTGACTCCTATGATCCTTCTCAATCTCAGCCCTACGCTCATGCCTATCAAGCTGTCCCTGGATATGCTATTGTCGAAGGAAGACCAGTGAGAGAGAGACGCCTTCCTTGCTGTGGTATTGGCATTGGGTGGTTCCTGTTCATTATTGGTTTCTTCATTGTTGGCATCCCGTGGTATGCTGGGGCAATTGTCATACTATGTGGCAGGGTAGACTACCGCGAGAAACCTGGATATGTTGCCTGCACAATTGCTGCTATTCTTGGCACACTTGCACTTATTCTTGGCGTAACGAAGGGAGTTGATGTCTGGTAA

Coding sequence (CDS)

ATGAGCCAGGAGGAGAAAGCCGCCGCCGCCGCAGGGGTCGTCGTCCACCACCATCACGAATCCAATTCCGGCCACCCTCAGTACGGCACCTTCCAAGGCGTCGCCAATTATCCTCCGGTCGGATTTCCCCAGCCTATTCGCCCACCCGGCGCCTCTGACTCCTATGATCCTTCTCAATCTCAGCCCTACGCTCATGCCTATCAAGCTGTCCCTGGATATGCTATTGTCGAAGGAAGACCAGTGAGAGAGAGACGCCTTCCTTGCTGTGGTATTGGCATTGGGTGGTTCCTGTTCATTATTGGTTTCTTCATTGTTGGCATCCCGTGGTATGCTGGGGCAATTGTCATACTATGTGGCAGGGTAGACTACCGCGAGAAACCTGGATATGTTGCCTGCACAATTGCTGCTATTCTTGGCACACTTGCACTTATTCTTGGCGTAACGAAGGGAGTTGATGTCTGGTAA

Protein sequence

MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW

Homology

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BLAST of MC11g_new0167 vs. ExPASy Swiss-Prot
Match: Q8L9S1 (60S ribosomal protein L18a-like protein OS=Arabidopsis thaliana OX=3702 GN=At1g29970 PE=2 SV=2)

HSP 1 Score: 129.8 bits (325), Expect = 2.7e-29
Identity = 72/168 (42.86%), Postives = 96/168 (57.14%), Query Frame = 0


Query: 4   EEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPY 63
           +E+AA      V+  H+       YGTFQGVAN     FP P  PP       P  + P 
Sbjct: 2   DEEAAKPRDSTVNQQHQY-----YYGTFQGVAN-----FPTPTPPPQFMQPQHPITTFP- 61

Query: 64  AHAYQ-----------------AVPGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVG 123
            HAYQ                  VP Y +VE RP+ E  LPCCG+G+GWFLFI+GF   G
Sbjct: 62  GHAYQNLQGHGGGVNYAQGFPVVVPDYTVVEVRPMIEHELPCCGLGMGWFLFIMGFLFGG 121

Query: 124 IPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW 155
           IPWY GA ++L   VD+REK GYVAC+IA+++  +A++LG+T  +++W
Sbjct: 122 IPWYLGAFIVLVTSVDHREKAGYVACSIASVVYLIAVMLGMTGDINIW 158

[Close]

BLAST of MC11g_new0167 vs. NCBI nr
Match: XP_022135554.1 (60S ribosomal protein L18a-like protein [Momordica charantia])

HSP 1 Score: 322 bits (825), Expect = 3.53e-111
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQS 60
           MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQS
Sbjct: 1   MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQS 60

Query: 61  QPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGR 120
           QPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGR
Sbjct: 61  QPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGR 120

Query: 121 VDYREKPGYVACTIAAILGTLALILGVTKGVDVW 154
           VDYREKPGYVACTIAAILGTLALILGVTKGVDVW
Sbjct: 121 VDYREKPGYVACTIAAILGTLALILGVTKGVDVW 154

[Close]

BLAST of MC11g_new0167 vs. NCBI nr
Match: XP_038896754.1 (60S ribosomal protein L18a-like protein [Benincasa hispida])

HSP 1 Score: 269 bits (688), Expect = 2.66e-90
Identity = 127/154 (82.47%), Postives = 135/154 (87.66%), Query Frame = 0


Query: 1   MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQS 60
           MSQE+K+AA  GVVVHHHHESNSGHP YGTFQGVANYPPVGFPQP RPPG SDS DPSQ 
Sbjct: 1   MSQEDKSAAV-GVVVHHHHESNSGHPLYGTFQGVANYPPVGFPQPTRPPGVSDSDDPSQY 60

Query: 61  QPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGR 120
           Q YAH YQAVPGY IVEGRPVRERRLPCCGIGIGWFLFIIGFF+  IPWYAGAI+ILCGR
Sbjct: 61  QDYAHGYQAVPGYGIVEGRPVRERRLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGR 120

Query: 121 VDYREKPGYVACTIAAILGTLALILGVTKGVDVW 154
           VDYREKPGYVAC IAA+L T+A+I G T+  D W
Sbjct: 121 VDYREKPGYVACLIAAVLATVAIIFGATREADDW 153

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BLAST of MC11g_new0167 vs. NCBI nr
Match: XP_008452440.1 (PREDICTED: 60S ribosomal protein L18a-like protein [Cucumis melo] >KAA0064318.1 60S ribosomal protein L18a-like protein [Cucumis melo var. makuwa] >TYK20268.1 60S ribosomal protein L18a-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 264 bits (674), Expect = 3.63e-88
Identity = 125/154 (81.17%), Postives = 134/154 (87.01%), Query Frame = 0


Query: 1   MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQS 60
           MSQE+K+AA  GVVVHHHHESNS HP YGTFQGVANYPPV FPQP RPPG SDS DPSQ 
Sbjct: 1   MSQEDKSAAV-GVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQY 60

Query: 61  QPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGR 120
           Q YAH YQAVPGYAIVEGRPVRE  LPCCGIGIGWFLFIIGFF+  IPWYAGAI+ILCGR
Sbjct: 61  QHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGR 120

Query: 121 VDYREKPGYVACTIAAILGTLALILGVTKGVDVW 154
           VDYREKPGYVAC+IAA++ TLA+I G T+  DVW
Sbjct: 121 VDYREKPGYVACSIAAVIATLAIIFGATREADVW 153

[Close]

BLAST of MC11g_new0167 vs. NCBI nr
Match: XP_004146004.1 (60S ribosomal protein L18a-like protein [Cucumis sativus] >KGN55009.1 hypothetical protein Csa_012352 [Cucumis sativus])

HSP 1 Score: 254 bits (649), Expect = 2.35e-84
Identity = 119/154 (77.27%), Postives = 132/154 (85.71%), Query Frame = 0


Query: 1   MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQS 60
           MS+++K+AA  GVVVHHHHESNS HP YGTFQGVANYPPVGF  P R PG  DS DPSQ 
Sbjct: 1   MSEQDKSAAV-GVVVHHHHESNSPHPHYGTFQGVANYPPVGFSHPTRLPGVPDSDDPSQY 60

Query: 61  QPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGR 120
           Q YAH YQAVPGYAIVEGRPVRE RLPCCGIGIGWFLFIIGFF+  IPWYAGAI+I+CGR
Sbjct: 61  QHYAHGYQAVPGYAIVEGRPVREPRLPCCGIGIGWFLFIIGFFLAAIPWYAGAILIICGR 120

Query: 121 VDYREKPGYVACTIAAILGTLALILGVTKGVDVW 154
           VDYREKPGYVAC+IAA++ T+A+I G T+  DVW
Sbjct: 121 VDYREKPGYVACSIAAVIATVAIIFGATREADVW 153

[Close]

BLAST of MC11g_new0167 vs. NCBI nr
Match: XP_023536200.1 (60S ribosomal protein L18a-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 244 bits (623), Expect = 2.08e-80
Identity = 118/154 (76.62%), Postives = 127/154 (82.47%), Query Frame = 0


Query: 1   MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQS 60
           MSQE+K+AA  GVVVHHHHE N GHP YGTFQGVANYPPVGFPQP RPPG SD  D SQ 
Sbjct: 1   MSQEDKSAAV-GVVVHHHHEPNPGHPHYGTFQGVANYPPVGFPQPTRPPGVSDFDDRSQP 60

Query: 61  QPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGR 120
           Q YAH YQ V GYAIVEGRPVRE RLPCCGIG GWFLFIIGF I+   WY GAI+ILCGR
Sbjct: 61  QQYAHGYQTVTGYAIVEGRPVREPRLPCCGIGYGWFLFIIGF-ILPATWYIGAILILCGR 120

Query: 121 VDYREKPGYVACTIAAILGTLALILGVTKGVDVW 154
           V YREKPGYVAC+IAA++ T+A+I G TKG DVW
Sbjct: 121 VHYREKPGYVACSIAAVIATVAIIFGATKGADVW 152

[Close]

BLAST of MC11g_new0167 vs. ExPASy TrEMBL
Match: A0A6J1C1R6 (60S ribosomal protein L18a-like protein OS=Momordica charantia OX=3673 GN=LOC111007453 PE=4 SV=1)

HSP 1 Score: 322 bits (825), Expect = 1.71e-111
Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0


Query: 1   MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQS 60
           MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQS
Sbjct: 1   MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQS 60

Query: 61  QPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGR 120
           QPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGR
Sbjct: 61  QPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGR 120

Query: 121 VDYREKPGYVACTIAAILGTLALILGVTKGVDVW 154
           VDYREKPGYVACTIAAILGTLALILGVTKGVDVW
Sbjct: 121 VDYREKPGYVACTIAAILGTLALILGVTKGVDVW 154

[Close]

BLAST of MC11g_new0167 vs. ExPASy TrEMBL
Match: A0A5D3D9U1 (60S ribosomal protein L18a-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G004080 PE=4 SV=1)

HSP 1 Score: 264 bits (674), Expect = 1.76e-88
Identity = 125/154 (81.17%), Postives = 134/154 (87.01%), Query Frame = 0


Query: 1   MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQS 60
           MSQE+K+AA  GVVVHHHHESNS HP YGTFQGVANYPPV FPQP RPPG SDS DPSQ 
Sbjct: 1   MSQEDKSAAV-GVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQY 60

Query: 61  QPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGR 120
           Q YAH YQAVPGYAIVEGRPVRE  LPCCGIGIGWFLFIIGFF+  IPWYAGAI+ILCGR
Sbjct: 61  QHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGR 120

Query: 121 VDYREKPGYVACTIAAILGTLALILGVTKGVDVW 154
           VDYREKPGYVAC+IAA++ TLA+I G T+  DVW
Sbjct: 121 VDYREKPGYVACSIAAVIATLAIIFGATREADVW 153

[Close]

BLAST of MC11g_new0167 vs. ExPASy TrEMBL
Match: A0A1S3BUZ1 (60S ribosomal protein L18a-like protein OS=Cucumis melo OX=3656 GN=LOC103493475 PE=4 SV=1)

HSP 1 Score: 264 bits (674), Expect = 1.76e-88
Identity = 125/154 (81.17%), Postives = 134/154 (87.01%), Query Frame = 0


Query: 1   MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQS 60
           MSQE+K+AA  GVVVHHHHESNS HP YGTFQGVANYPPV FPQP RPPG SDS DPSQ 
Sbjct: 1   MSQEDKSAAV-GVVVHHHHESNSAHPHYGTFQGVANYPPVEFPQPTRPPGLSDSDDPSQY 60

Query: 61  QPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGR 120
           Q YAH YQAVPGYAIVEGRPVRE  LPCCGIGIGWFLFIIGFF+  IPWYAGAI+ILCGR
Sbjct: 61  QHYAHGYQAVPGYAIVEGRPVREPPLPCCGIGIGWFLFIIGFFLAAIPWYAGAILILCGR 120

Query: 121 VDYREKPGYVACTIAAILGTLALILGVTKGVDVW 154
           VDYREKPGYVAC+IAA++ TLA+I G T+  DVW
Sbjct: 121 VDYREKPGYVACSIAAVIATLAIIFGATREADVW 153

[Close]

BLAST of MC11g_new0167 vs. ExPASy TrEMBL
Match: A0A0A0L1Y0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G621210 PE=4 SV=1)

HSP 1 Score: 254 bits (649), Expect = 1.14e-84
Identity = 119/154 (77.27%), Postives = 132/154 (85.71%), Query Frame = 0


Query: 1   MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQS 60
           MS+++K+AA  GVVVHHHHESNS HP YGTFQGVANYPPVGF  P R PG  DS DPSQ 
Sbjct: 1   MSEQDKSAAV-GVVVHHHHESNSPHPHYGTFQGVANYPPVGFSHPTRLPGVPDSDDPSQY 60

Query: 61  QPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGR 120
           Q YAH YQAVPGYAIVEGRPVRE RLPCCGIGIGWFLFIIGFF+  IPWYAGAI+I+CGR
Sbjct: 61  QHYAHGYQAVPGYAIVEGRPVREPRLPCCGIGIGWFLFIIGFFLAAIPWYAGAILIICGR 120

Query: 121 VDYREKPGYVACTIAAILGTLALILGVTKGVDVW 154
           VDYREKPGYVAC+IAA++ T+A+I G T+  DVW
Sbjct: 121 VDYREKPGYVACSIAAVIATVAIIFGATREADVW 153

[Close]

BLAST of MC11g_new0167 vs. ExPASy TrEMBL
Match: A0A6J1INF5 (60S ribosomal protein L18a-like protein OS=Cucurbita maxima OX=3661 GN=LOC111477112 PE=4 SV=1)

HSP 1 Score: 244 bits (622), Expect = 1.43e-80
Identity = 118/154 (76.62%), Postives = 127/154 (82.47%), Query Frame = 0


Query: 1   MSQEEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQS 60
           MSQE+K+AA  GVVVHHHHE N GHP YGTFQGVANYPPVGFPQP RPPG SD  D SQ 
Sbjct: 1   MSQEDKSAAV-GVVVHHHHEPNPGHPHYGTFQGVANYPPVGFPQPTRPPGVSDFDDRSQP 60

Query: 61  QPYAHAYQAVPGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGR 120
           Q YAH YQ V GYAIVEGRPVRE RLPCCGIG GWFLFIIGF I+   WY GAI+ILCGR
Sbjct: 61  QNYAHGYQTVTGYAIVEGRPVREPRLPCCGIGYGWFLFIIGF-ILPATWYIGAILILCGR 120

Query: 121 VDYREKPGYVACTIAAILGTLALILGVTKGVDVW 154
           V YREKPGYVAC+IAA++ T+A+I G TKG DVW
Sbjct: 121 VHYREKPGYVACSIAAVIATVAIIFGATKGADVW 152

[Close]

BLAST of MC11g_new0167 vs. TAIR 10
Match: AT1G17080.1 (Ribosomal protein L18ae family )

HSP 1 Score: 180.6 bits (457), Expect = 9.3e-46
Identity = 89/144 (61.81%), Postives = 105/144 (72.92%), Query Frame = 0


Query: 20  ESNSGHPQYGTFQGVANYPP-------VGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPG 79
           E  + H QYGTFQGV+NYPP        GFPQP  PPG  DS  P     YAH YQ VP 
Sbjct: 15  EEGNQHHQYGTFQGVSNYPPPQNSAPVTGFPQPSAPPGVYDSGAPY----YAHGYQTVPV 74

Query: 80  Y-AIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCG-RVDYREKPGYV 139
           +  + EGRPVR+RRLPCCGIG+GWFLFI+GFF+  IPWY G  +++ G R+DYREKPGY+
Sbjct: 75  HGGVAEGRPVRQRRLPCCGIGLGWFLFIVGFFLGAIPWYVGLFIMMFGRRIDYREKPGYI 134

Query: 140 ACTIAAILGTLALILGVTKGVDVW 155
           ACTIAAIL T+A+ILGV+KG D W
Sbjct: 135 ACTIAAILATIAVILGVSKGADDW 154

[Close]

BLAST of MC11g_new0167 vs. TAIR 10
Match: AT1G53560.1 (Ribosomal protein L18ae family )

HSP 1 Score: 152.9 bits (385), Expect = 2.1e-37
Identity = 73/139 (52.52%), Postives = 91/139 (65.47%), Query Frame = 0


Query: 28  YGTFQGVANYPP------------VGFPQPIRPPGASDSYDPSQSQPYAHAYQAVPGYAI 87
           YGTFQGV  YPP            +G PQP  PPG S  +D S  Q Y   +Q V GY +
Sbjct: 16  YGTFQGVPTYPPPSYPHPPSHHPVIGIPQPSPPPG-SPHHDISVHQ-YIQEHQTVAGYPV 75

Query: 88  VEGRPVRERRLPCCGIGIGWFLFIIGFFIVGIPWYAGAIVILCGRVDYREKPGYVACTIA 147
            +GRP R+ RLPCCG+G+GWFLFIIGF +  IPWY G  +++C R+D REKPGYVACTIA
Sbjct: 76  SQGRPARQNRLPCCGLGLGWFLFIIGFLLGAIPWYVGVFILVCARIDPREKPGYVACTIA 135

Query: 148 AILGTLALILGVTKGVDVW 155
           A++ T+ ++ GV  G  VW
Sbjct: 136 AVVATITIVFGVMGGRGVW 152

[Close]

BLAST of MC11g_new0167 vs. TAIR 10
Match: AT1G29970.1 (60S ribosomal protein L18A-1 )

HSP 1 Score: 129.8 bits (325), Expect = 1.9e-30
Identity = 72/168 (42.86%), Postives = 96/168 (57.14%), Query Frame = 0


Query: 4   EEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPY 63
           +E+AA      V+  H+       YGTFQGVAN     FP P  PP       P  + P 
Sbjct: 2   DEEAAKPRDSTVNQQHQY-----YYGTFQGVAN-----FPTPTPPPQFMQPQHPITTFP- 61

Query: 64  AHAYQ-----------------AVPGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVG 123
            HAYQ                  VP Y +VE RP+ E  LPCCG+G+GWFLFI+GF   G
Sbjct: 62  GHAYQNLQGHGGGVNYAQGFPVVVPDYTVVEVRPMIEHELPCCGLGMGWFLFIMGFLFGG 121

Query: 124 IPWYAGAIVILCGRVDYREKPGYVACTIAAILGTLALILGVTKGVDVW 155
           IPWY GA ++L   VD+REK GYVAC+IA+++  +A++LG+T  +++W
Sbjct: 122 IPWYLGAFIVLVTSVDHREKAGYVACSIASVVYLIAVMLGMTGDINIW 158

[Close]

BLAST of MC11g_new0167 vs. TAIR 10
Match: AT1G29970.2 (60S ribosomal protein L18A-1 )

HSP 1 Score: 115.5 bits (288), Expect = 3.7e-26
Identity = 67/149 (44.97%), Postives = 81/149 (54.36%), Query Frame = 0


Query: 4   EEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPY 63
           +E+AA      V+  H+       YGTFQGVAN     FP P  PP       P  + P 
Sbjct: 2   DEEAAKPRDSTVNQQHQY-----YYGTFQGVAN-----FPTPTPPPQFMQPQHPITTFP- 61

Query: 64  AHAYQ-----------------AVPGYAIVEGRPVRERRLPCCGIGIGWFLFIIGFFIVG 123
            HAYQ                  VP Y +VE RP+ E  LPCCG+G+GWFLFI+GF   G
Sbjct: 62  GHAYQNLQGHGGGVNYAQGFPVVVPDYTVVEVRPMIEHELPCCGLGMGWFLFIMGFLFGG 121

Query: 124 IPWYAGAIVILCGRVDYREKPGYVACTIA 136
           IPWY GA ++L   VD+REK GYVAC+IA
Sbjct: 122 IPWYLGAFIVLVTSVDHREKAGYVACSIA 139

[Close]

BLAST of MC11g_new0167 vs. TAIR 10
Match: AT1G29970.3 (60S ribosomal protein L18A-1 )

HSP 1 Score: 109.4 bits (272), Expect = 2.6e-24
Identity = 72/210 (34.29%), Postives = 96/210 (45.71%), Query Frame = 0


Query: 4   EEKAAAAAGVVVHHHHESNSGHPQYGTFQGVANYPPVGFPQPIRPPGASDSYDPSQSQPY 63
           +E+AA      V+  H+       YGTFQGVAN     FP P  PP       P  + P 
Sbjct: 2   DEEAAKPRDSTVNQQHQY-----YYGTFQGVAN-----FPTPTPPPQFMQPQHPITTFP- 61

Query: 64  AHAYQ-----------------AVPGYAIVEGRPVRERRLPCCGIGIGWFL--------- 123
            HAYQ                  VP Y +VE RP+ E  LPCCG+G+GWFL         
Sbjct: 62  GHAYQNLQGHGGGVNYAQGFPVVVPDYTVVEVRPMIEHELPCCGLGMGWFLSKLQKLRFM 121

Query: 124 ---------------------------------FIIGFFIVGIPWYAGAIVILCGRVDYR 155
                                            FI+GF   GIPWY GA ++L   VD+R
Sbjct: 122 VVGNSSLLSWNLFVSSEILDELIASWNQYKKSVFIMGFLFGGIPWYLGAFIVLVTSVDHR 181

The following BLAST results are available for this feature:

BLAST of MC11g_new0167 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9S1	2.7e-29	42.86	60S ribosomal protein L18a-like protein OS=Arabidopsis thaliana OX=3702 GN=At1g2...	[more]

BLAST of MC11g_new0167 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135554.1	3.53e-111	100.00	60S ribosomal protein L18a-like protein [Momordica charantia]	[more]
XP_038896754.1	2.66e-90	82.47	60S ribosomal protein L18a-like protein [Benincasa hispida]	[more]
XP_008452440.1	3.63e-88	81.17	PREDICTED: 60S ribosomal protein L18a-like protein [Cucumis melo] >KAA0064318.1 ...	[more]
XP_004146004.1	2.35e-84	77.27	60S ribosomal protein L18a-like protein [Cucumis sativus] >KGN55009.1 hypothetic...	[more]
XP_023536200.1	2.08e-80	76.62	60S ribosomal protein L18a-like protein [Cucurbita pepo subsp. pepo]	[more]

BLAST of MC11g_new0167 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C1R6	1.71e-111	100.00	60S ribosomal protein L18a-like protein OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A5D3D9U1	1.76e-88	81.17	60S ribosomal protein L18a-like protein OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BUZ1	1.76e-88	81.17	60S ribosomal protein L18a-like protein OS=Cucumis melo OX=3656 GN=LOC103493475 ...	[more]
A0A0A0L1Y0	1.14e-84	77.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G621210 PE=4 SV=1	[more]
A0A6J1INF5	1.43e-80	76.62	60S ribosomal protein L18a-like protein OS=Cucurbita maxima OX=3661 GN=LOC111477...	[more]

BLAST of MC11g_new0167 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17080.1	9.3e-46	61.81	Ribosomal protein L18ae family	[more]
AT1G53560.1	2.1e-37	52.52	Ribosomal protein L18ae family	[more]
AT1G29970.1	1.9e-30	42.86	60S ribosomal protein L18A-1	[more]
AT1G29970.2	3.7e-26	44.97	60S ribosomal protein L18A-1	[more]
AT1G29970.3	2.6e-24	34.29	60S ribosomal protein L18A-1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044804	AT1G29970-like	PANTHER	PTHR46631	60S RIBOSOMAL PROTEIN L18A-LIKE	coord: 16..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g_new0167.1	MC11g_new0167.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome