MC11g_new0126 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g_new0126
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC11: 5419527 .. 5423041 (-)
RNA-Seq Expression	MC11g_new0126
Synteny	MC11g_new0126

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCTCGTCGGCGCGTGTGGAGGAGAGAGATTGGAGATTAGTGGAGGAGAGGAGATGAAGGGAGGCGATTCGACGGAGGTTGCGCCAGTGATCGCCATAAGAAGTCCAAACAAGAGAAGTGTAGTGATGGCCTAAATGTTTACCGGCGTAAGGCGGGGGCGGTTAGCGAAAATGACGTCGTTTTTGGTGAGACATTGGTCAGCGGCGGAAGGGGAAGAGGCGAGGAGGACTGGACGAGAGCCGAAGCGGAGGAGGAGAACAGGGCCGTATTGGTCGGAAATTTTGGCCAAAGTCCGGTGGAGGGGCGGCTTGAGGAGGTGGAGATGGCCGACAAAGGGGAGGGCTGCGAAAGGGGATGGCGGGCGCTTCCGAATCTTACTGAGAAGACGACGAATCGAGACGAAAAGGAGGTAGAAGAAGAAAAAACATTGCAAAATAATGGATCCTATTTTCATTGGCTTGAAGTAGGTGGTGTGTTTCCATGTACATAAGTTACTTCATTTTAAATATATGATTTCATCTCTCTTTTGTGATGTCAAACATTTCACGTTGTTGAGGACAAAATTCATCGGAAGAAAGTCAAATATCTTCCTTATATAATTGGATGATATAACTAAATAGATGAAGATGTATGGTAAATATACAAGGGTATATAGAGTGGATAGATGGTTAAAAATTTTATCTCTTCTTTTATACATTCTTCTTTGTTTGTTAGTTGTCTAAATTTATGTTAAATTTTTTTAATCCTTTTTTTATTAATTTTTAGTAATCATTTAGAAACCCATAAGCCTGGAGAGTAAGGGTAGTTCTGGTTGGTGATCCATGGTATATAGATACACGATAACCTTGTCCTTGACTACTCACATCCGTCCCTCGATGGTGTTATTAATTAATTCATATTTATTGTTTTAATTAGTCTTAATAAATTTTAATTATTGCATTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTAGAACAATACATTTATTATTAATATTAATCTTTATGAGTAATTTAATATATATTTTTTTAAAATATACATGTACCTGTAAAATGTATATTTATATATATTTGAAAGAAGTAGTTTTTTTATAGATATATCTAACGCAAAAAAGTGCTTTCCTCGATAATTATAATATATTAAATAACATTAATTTTAATTTATAATTGATATTAAATAGATGATTAACATTATATTTAATATCTCAAATATGTAAATCCAAGATGTTTAACATCCACCCCGTGGAACAAAACCTACAATCCAAAAAAGTGCTTTCCTCGAAATATCAGTCAACATTGATATGTTTGTAAAATCGGAACCTCGACATTTTCGTTGACATCGACATTTCAAACCTTGATTATGTAATCTAATGCAAAGTTCGGTTCACATTAATACAAGTAATTTCTACTTATCCTTAAGTTAACCAACTAATAAGAGAAATATATGATTAACTTGCTAAACCAATCTGGTGCAACGCTGCAACCAAACTCTGCAAGCCTAAGTTCCGGTTACCCCCAACTACTCTTGCTTAAAAAAACTCCCAAGGAAAAAACAGCTGTTGGAAATGGATGTCCTTCTTTGTAATTATTCTTTTTATTTATTTTTTTATATCTGTGTATCCGAACCAACTTGTGTACCTCGACTATATTTGATTAGACAAGGAGACTCGTAGGATATTAAATCCTAGGTAGATGGCCATCCCAAGCAAGGTTAAGTTAACAAAGTTATAATTCTATTTAACCCACGGTTATCTTCTCGTCATACCTAGCAGCCCATGTGTGTTGTAAATTGTAATTAATAAGATATTCCTTCCAAAACCTTCGAAGGTTTTAAACATATGTTTCATTTCCTCCCTTAAACTAAAAATTAAGGATGAATCTGAAAAAGCAGAGCTAGGAATTTCATGACACAGAAGAAAACTAGAGTACATTTTTGAATGTGAGAAGCCTAAAGGTGTTACACACTGCTGCAGAACTTATCCTTCAGGATTTGAATAATCCACATTAGGACGACAACTTAAATCAAAGTATTAGTTCCTTTCTCCACGAAGTCAATGGCATTTACAGGAGTTGTATACCGACAATAAGAGTACAAAAAATAAAGAAAACTAGGTTACAAAGCATCAAAAGTTGCTGACCTGTTAAGAGAATTTGCTTTAGCGATCCAACTCCACACTTGGAAGACTTCCCTTATGTCAACCTTAATATATCTTTAATAATTGCTGCACAAGAAACAAAGTAAGACAAAGACAAAAATATCTTCAACCTTGAGCCTTACATGGAATCTCTCTCCCCCTAAAACCCTATCCATATCCTTGAGCAATCCAACTCCACTCTTTCAGAATCTGTCTTACATAAACCTAAATATATCTCCCAGTAACTTGCGTGAAAGAAACAAAAGAAATCGAAAACAGAGAGAAATACACTATGCAGGAATGAAACAGACCAGGGGAGGATAAAAACACTGAATCTGTGGCCCCGGGGTCCTGAATTGTAAAAGAATCGTAATTACCCTCTTTCTATTTTATTCCAAGTCAACAGCACTTTATTAACTCCTTTGATTAGGATCATTTTTGTTTCAAAACAGAAAAGAAAACATACTTCCTTTTTCAGTTGATAAACAACGAATCTGGGTTCAAGTAGATGAAAATGCATTTATTCATTCATAAAACCTCATTTTCTTATAGCGACTATTTAAGTACTTCCCATATGAGGCTCCACTCTTAGACACTAGTTGTTGCTAAACAATCCTTAAATTTTTTTGAAAATGTTACTTTTCTAAATTTCGACATCAAAACAGAGATTACAATCGAGATACCCAGTGAGAAATATAATTACTCTATGCTAAAGTAGCCACAGATATGAAAGATGGAAAAATCACAAACCACTTCCCAGTGGACTTGTGCCTACCTCGTCAATCCTTGATGATTAATTTCTTCGATCAATGTCTCCACTTTACCCTATGATCAGACATTAAAAAAAAAAAAAAGGAAACAAATCAACAAAATAGGAAAGATTGGTTGGACCAGTCAAGGGATATTGACATACCACGAAGGCTAGCAACGTGATAAAACAACACCCTACAGTATGTTGGAACGTAATCGTAGGCATTCAAAGTCATTACAGCCATAAGCAAGAGAGACTCGTACACAAAAATGTTGGAATAAACTCAATAATGCTGATCATAAATTTGTAGTGCAGGGCTCTTCATCAGCGAACAAGAAAGGGAGTCCGATTTCGCCTGTGTTGATGAATATCCATGAACAATGGTCGGAAGAATATCTCCGATTCCAGCAATCATCGGAAGAATATCGCCTATTTCTGAACGACGACAGAGAAGTTCAGAAGAGAAAGGGACCGAGCGCGGGACGAAGAGGCCAAACGAACCCTATATATAGGACTTGCCAGCGTAATTTTGACGCAATGACTTTGACCGAGTCAAACTTTGACTCTTTGCCAGCTGGCAGTCCGTCAAAGCGTGAAATTTACGCCTAA

mRNA sequence

ATGGACCTCGTCGGCGCGTGTGGAGGAGAGAGATTGGAGATTAGTGGAGGAGAGGAGATGAAGGGAGGCGATTCGACGGAGGCGGGGGCGGTTAGCGAAAATGACGTCGTTTTTGGTGAGACATTGGTCAGCGGCGGAAGGGGAAGAGGCGAGGAGGACTGGACGAGAGCCGAAGCGGAGGAGGAGAACAGGGCCGTATTGGTCGGAAATTTTGGCCAAAGTCCGGTGGAGGGGCGGCTTGAGGAGGTGGAGATGGCCGACAAAGGGGAGGGCTGCGAAAGGGGATGGCGGGCGCTTCCGAATCTTACTGAGAAGACGACGAATCGAGACGAAAAGGAGGGCTCTTCATCAGCGAACAAGAAAGGGAGTCCGATTTCGCCTGTGTTGATGAATATCCATGAACAATGGTCGGAAGAATATCTCCGATTCCAGCAATCATCGGAAGAATATCGCCTATTTCTGAACGACGACAGAGAAGTTCAGAAGAGAAAGGGACCGAGCGCGGGACGAAGAGGCCAAACGAACCCTATATATAGGACTTGCCAGCGTAATTTTGACGCAATGACTTTGACCGAGTCAAACTTTGACTCTTTGCCAGCTGGCAGTCCGTCAAAGCGTGAAATTTACGCCTAA

Coding sequence (CDS)

ATGGACCTCGTCGGCGCGTGTGGAGGAGAGAGATTGGAGATTAGTGGAGGAGAGGAGATGAAGGGAGGCGATTCGACGGAGGCGGGGGCGGTTAGCGAAAATGACGTCGTTTTTGGTGAGACATTGGTCAGCGGCGGAAGGGGAAGAGGCGAGGAGGACTGGACGAGAGCCGAAGCGGAGGAGGAGAACAGGGCCGTATTGGTCGGAAATTTTGGCCAAAGTCCGGTGGAGGGGCGGCTTGAGGAGGTGGAGATGGCCGACAAAGGGGAGGGCTGCGAAAGGGGATGGCGGGCGCTTCCGAATCTTACTGAGAAGACGACGAATCGAGACGAAAAGGAGGGCTCTTCATCAGCGAACAAGAAAGGGAGTCCGATTTCGCCTGTGTTGATGAATATCCATGAACAATGGTCGGAAGAATATCTCCGATTCCAGCAATCATCGGAAGAATATCGCCTATTTCTGAACGACGACAGAGAAGTTCAGAAGAGAAAGGGACCGAGCGCGGGACGAAGAGGCCAAACGAACCCTATATATAGGACTTGCCAGCGTAATTTTGACGCAATGACTTTGACCGAGTCAAACTTTGACTCTTTGCCAGCTGGCAGTCCGTCAAAGCGTGAAATTTACGCCTAA

Protein sequence

MDLVGACGGERLEISGGEEMKGGDSTEAGAVSENDVVFGETLVSGGRGRGEEDWTRAEAEEENRAVLVGNFGQSPVEGRLEEVEMADKGEGCERGWRALPNLTEKTTNRDEKEGSSSANKKGSPISPVLMNIHEQWSEEYLRFQQSSEEYRLFLNDDREVQKRKGPSAGRRGQTNPIYRTCQRNFDAMTLTESNFDSLPAGSPSKREIYA

Homology

[Close]

BLAST of MC11g_new0126 vs. NCBI nr
Match: GER30930.1 (protein kinase superfamily protein [Striga asiatica])

HSP 1 Score: 53.1 bits (126), Expect = 6.44e-05
Identity = 43/115 (37.39%), Postives = 58/115 (50.43%), Query Frame = 0


Query: 2   DLVGACGGERLEISGGEEMKGGDSTEAGAVSENDVVFGETLVSGGRGRGEEDW-TRAEAE 61
           DLV   G ER+E   GE++ GG++ E   V          +  GG G G++     AEAE
Sbjct: 54  DLVVPDGVERVEPRAGEDLDGGEAAEVPPV----------VSVGGAGEGDDHGKAAAEAE 113

Query: 62  EENRAVLVGNFGQSPVEGRLEEVEMADKGEGCERGWRALPNLTE-KTTNRDEKEG 114
            E+ A  +G    S V+G L+EVE+A   EG  R WR   +L E K   R  +EG
Sbjct: 114 GEDGARFLGEAVVSAVDGGLQEVEVAKDWEGPGRAWREFVDLREIKRMRRRVREG 158

[Close]

BLAST of MC11g_new0126 vs. NCBI nr
Match: KCW66349.1 (hypothetical protein EUGRSUZ_F001742 [Eucalyptus grandis])

HSP 1 Score: 52.4 bits (124), Expect = 3.61e-04
Identity = 39/88 (44.32%), Postives = 50/88 (56.82%), Query Frame = 0


Query: 4   VGACGGERLEISGGEEMKGGDSTE-AGAVSENDVVFGETLVSGGRGRGEEDWTRAEAEEE 63
           VGA GG      GG  +    + E AGAV E DVV GE L+S GRG  ++   RA+ E E
Sbjct: 185 VGAVGGA---ADGGVAVSHDLARERAGAVGEGDVVPGEALLSRGRGGYDDRGPRAQGEGE 244

Query: 64  NRAVLVGNFGQSPVEGRLEEVEMADKGE 90
           +RA+ VG   +  V+    EVE+AD GE
Sbjct: 245 DRAIAVGEGLKGAVDRLFYEVEVADDGE 269

[Close]

BLAST of MC11g_new0126 vs. ExPASy TrEMBL
Match: A0A5A7PE05 (Protein kinase superfamily protein OS=Striga asiatica OX=4170 GN=STAS_06895 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.12e-05
Identity = 43/115 (37.39%), Postives = 58/115 (50.43%), Query Frame = 0


Query: 2   DLVGACGGERLEISGGEEMKGGDSTEAGAVSENDVVFGETLVSGGRGRGEEDW-TRAEAE 61
           DLV   G ER+E   GE++ GG++ E   V          +  GG G G++     AEAE
Sbjct: 54  DLVVPDGVERVEPRAGEDLDGGEAAEVPPV----------VSVGGAGEGDDHGKAAAEAE 113

Query: 62  EENRAVLVGNFGQSPVEGRLEEVEMADKGEGCERGWRALPNLTE-KTTNRDEKEG 114
            E+ A  +G    S V+G L+EVE+A   EG  R WR   +L E K   R  +EG
Sbjct: 114 GEDGARFLGEAVVSAVDGGLQEVEVAKDWEGPGRAWREFVDLREIKRMRRRVREG 158

[Close]

BLAST of MC11g_new0126 vs. ExPASy TrEMBL
Match: A0A059BJY4 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F001742 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.75e-04
Identity = 39/88 (44.32%), Postives = 50/88 (56.82%), Query Frame = 0


Query: 4   VGACGGERLEISGGEEMKGGDSTE-AGAVSENDVVFGETLVSGGRGRGEEDWTRAEAEEE 63
           VGA GG      GG  +    + E AGAV E DVV GE L+S GRG  ++   RA+ E E
Sbjct: 185 VGAVGGA---ADGGVAVSHDLARERAGAVGEGDVVPGEALLSRGRGGYDDRGPRAQGEGE 244

Query: 64  NRAVLVGNFGQSPVEGRLEEVEMADKGE 90
           +RA+ VG   +  V+    EVE+AD GE
Sbjct: 245 DRAIAVGEGLKGAVDRLFYEVEVADDGE 269

The following BLAST results are available for this feature:

BLAST of MC11g_new0126 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g_new0126 vs. NCBI nr


Match Name	E-value	Identity	Description
GER30930.1	6.44e-05	37.39	protein kinase superfamily protein [Striga asiatica]	[more]
KCW66349.1	3.61e-04	44.32	hypothetical protein EUGRSUZ_F001742 [Eucalyptus grandis]	[more]

BLAST of MC11g_new0126 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7PE05	3.12e-05	37.39	Protein kinase superfamily protein OS=Striga asiatica OX=4170 GN=STAS_06895 PE=4...	[more]
A0A059BJY4	1.75e-04	44.32	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F001742 PE=4 S...	[more]

BLAST of MC11g_new0126 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g_new0126.1	MC11g_new0126.1	mRNA