MC11g_new0073 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g_new0073
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC11: 1945489 .. 1948406 (+)
RNA-Seq Expression	MC11g_new0073
Synteny	MC11g_new0073

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAAATCATTGATAACACTTAGTGGTAAATTACATGTCCTATTAAATTTGTATAAAATAATTCCTAAAAAAATTAAGCAAACAAAAGGTAATACATAGTTATTATTTATTATAAATTCCAAATCTACCAATAAATACAATTTTAATAAACTTAGGTTTAACAAAATGATCCAAACAAAGGTTTAGCATACTCACAGTTGACTTTTTTTGTCAACCAAATAAAGGTTTAATAAATCCAAACTTAACAAACATGATATTTGCACAACTAAATACGGACTTAGAAAAGAACTCATACTTAATAAACACGCGTCGCAAACCAAACCCCCTCAGAGTTATTAGAAGTTGTTAAAGTTGATGGTTTGGCTTGATCTAAAGATTTGGAGGCAGTGGAGACTGCACAGCATTCCACCTCTAACAATGGTGGTGCAGATGAGGTGGGGAAGAGTAAGAGACAGAAGCCATGAACTCCGTATCCGACTCCAAATTGGCCATATTTTTCGGCAACAGAGTGATCTCTAAATCTACGCTTCCTCCTCCATCACGTCCTGGATACGAAGTCGCTTTCCCATCAAACTTGTTTCCACATCCACTCCGAACCCCCATCGCTTTTCCCATTCCAAATTCATTCTCATATATCTTGAATCTCGGGGAGCTCGTGATCACCACGGCGTAGGGATCCATTCCTTCCCCAAATCGATGAAAAGAAGGAGACTGCAACCATTTTTCAACTTCCTCTCTCAACTTCTCGTACTTATTGTCCACCACAGCTTCGTGCAATTTCCACGCTCCCCAACCAACCCCTGCTTCCACCAACTCCCCTGCTTTTGCCTCTGCTTTCACTGCTGTCACTATGTTGCCGAAGTGGTCTTCACACAAGGGGGGCTCTAGTCTTCCTCTGTTATTGGCAAACAACTTGCAGCTACTGCTTTGATCCTCTGCTACGCTACGAGCACGTGTTATGGACCTCCATACAAGTGCGCACAACGCCTGGAAGGACGAGATCTCATTGGTGCCGCACTCTGCGTTGGCTCTTGCTTTCAGCTTTGCGATGGATTCTTTTGAGAAGTGGAACACCCTCTCCCTAAGTTTTTGGGGTGCTACGGAAACGGATCTGCTGATAAATTGATCCGGGTGGGTGAAGGGGAGATTGATGATTGGACCATACCCTTTCGGGAACCACTGCTTCAGAATGGGCGCCCGTGAAATTGGAACGTCATTAAAAATCTCAGACCAAGTACGGAAGAAATTCCAGTGAGAGGTTCCGTCGCCAATGGAATGGTTTAGGGAGGAACCAATGAAGATGCCGTCCAACAATTCAGTGACCTGAATGGAGAGTATAGGCAGGGTATGGGCGTCGTAGTTGACGGCTCCGTTGAGGTCAAACAGAGATTGGAGCAGTAAAGGCTCATCGTCATTTGGGGACAGAATGTCAGAAATTGTGGCGTCCAGAGCAGCGTGGGTGAACTTTGCTCCGGGGCTGTTAATGCAGTCCACATAAATAAAAATGGAAGCTTGGCCATCAATGTGATTGTTGGCCGTACAAAATCGGCCTGTAAGTGGGTAGAAATGGAAGAGAGCGGTGGAAAGGGAATTTTTGAGGCGGTGGAGAAGAGTGAGCATGAAATTGTGTGGGTCGCCGTAGGCCTCAGAAGGTTTGAGAAAGAGGAGCCCTTTCTGGATGTAATTTACGGAAAGCATGGTGAGATCCCAAAGGTTCAAATAATAGGGCTGCTTGGATTCTTGGGGAAGGCAATCTGGTTTGACAAAGCAGTCGGAGATCCGCCGGAGAGAAGGATGATGGGGAAGCATCGTCGTCGGAGTCGGAGTTGGGCAAGGGCGAGGGGAGGTTTTTATTGTGTGTTCAACTGAAAGGTACTACTACTCGCCTACTCGCCTACTCGCCTTTCTCGTATCATCTTTATCTTCGGAATCAAACAGCCTGAAATTAAACACCAACAAAGAAACAGTTTTTAGTCAGCATGCCGTAGGCCCTACAGGCTACAACAAGCCCAGACCACAAATATCATAATTAATTACTGGGCCCATTACAGCCCAACAAAGCCAATTTAATAAGAAGTCCAAAATGCTCAACTTTTTTAGTTGGGAATTGTATAGCTATTACTCAAGTTTACCTTAAAAGGACTTAAAAATAAACTTCGCTTGGGTGGATAGTGACAATTTTTATTATTATTTTTTCACTCTTTTATCCTTTGTATAATTTTAAAATCTTAAAGTTACTCCTAATAATCTAATAATATTTGTTTATATCTTAAAATTAAAATAATATTTATGCTATATAATTAAATAAAAGTACATTGAACTAAAACTATTTAATCAAATAAATTTTTTTTAGGAATAAAAAAAAGTTTAAAAGAACCTGTGTTTTGTGGTTTAGAATGAGATCCAACGATTATAAATAAAGTCTTGAAACCTAAAAAAACAATAGTCTAAAATATGTCAAATATAGCCCATTGTCTCAACTTTTATGATTTTGCACAATTTGGTCTTTTAAGCTTATAAAATTCTCAATTTTAACCTTAATGTATTACTAGTTCTCAATTGGGTACTTCAGTGAAGAAAGTTTTTAAAGTTTATTAACATAAAACTATCGTTATATTTTGCGCCTTAATTGAAGAGTTTTGCATGCAGACAAATATGGAGGGCTCTAGTGGCAGGCCATGATTTTCAGATGTTGGCTCCAATTTAACAGAAACTCCCCGTCGGAGATTTAGTGTTAGTAGAAGTCAATTTTTTACCAGACCGGTGAATTCTGTGACAATGCTCTTCTCATCATGGGGATTCAGAGTAGCCGTGAGGCACGGTTGAAGCTAAATTATAAGATGATTTTGGATTCAGAGTAGCCGGTGAATTCTGAATATACTTGGAAAATTTTTTCAAGGAGAAAAAATATACACCT

mRNA sequence

ATGGACCTCCATACAAGTGCGCACAACGCCTGGAAGGACGAGATCTCATTGGTGCCGCACTCTGCGTTGGCTCTTGCTTTCAGCTTTGCGATGGATTCTTTTGAGAAGTGGAACACCCTCTCCCTAAGTTTTTGGGGTGCTACGGAAACGGATCTGCTGATAAATTGA

Coding sequence (CDS)

ATGGACCTCCATACAAGTGCGCACAACGCCTGGAAGGACGAGATCTCATTGGTGCCGCACTCTGCGTTGGCTCTTGCTTTCAGCTTTGCGATGGATTCTTTTGAGAAGTGGAACACCCTCTCCCTAAGTTTTTGGGGTGCTACGGAAACGGATCTGCTGATAAATTGA

Protein sequence

MDLHTSAHNAWKDEISLVPHSALALAFSFAMDSFEKWNTLSLSFWGATETDLLIN

Homology

[Close]

BLAST of MC11g_new0073 vs. NCBI nr
Match: RDX64586.1 (hypothetical protein CR513_56839, partial [Mucuna pruriens])

HSP 1 Score: 58.5 bits (140), Expect = 1.10e-08
Identity = 29/43 (67.44%), Postives = 33/43 (76.74%), Query Frame = 0


Query: 1   MDLHTSAHNAWKDEISLVPHSALALAFSFAMDSFEKWNTLSLS 43
           MDL TSA N W ++I LV +S LA AFSFA+DS EKW TLSLS
Sbjct: 121 MDLQTSADNDWNEDILLVFNSELAFAFSFAIDSAEKWKTLSLS 163

[Close]

BLAST of MC11g_new0073 vs. NCBI nr
Match: PON94220.1 (LOW QUALITY PROTEIN: hypothetical protein TorRG33x02_099580 [Trema orientale])

HSP 1 Score: 56.2 bits (134), Expect = 1.06e-07
Identity = 29/43 (67.44%), Postives = 31/43 (72.09%), Query Frame = 0


Query: 1   MDLHTSAHNAWKDEISLVPHSALALAFSFAMDSFEKWNTLSLS 43
           MDL TSA   WK+EI LV  SALA A SFA+DS EKW  LSLS
Sbjct: 135 MDLQTSADKDWKEEILLVLPSALAFALSFAIDSTEKWKNLSLS 177

[Close]

BLAST of MC11g_new0073 vs. NCBI nr
Match: PON65053.1 (LOW QUALITY PROTEIN: hypothetical protein PanWU01x14_119700 [Parasponia andersonii])

HSP 1 Score: 56.2 bits (134), Expect = 1.06e-07
Identity = 29/43 (67.44%), Postives = 31/43 (72.09%), Query Frame = 0


Query: 1   MDLHTSAHNAWKDEISLVPHSALALAFSFAMDSFEKWNTLSLS 43
           MDL TSA   WK+EI LV  SALA A SFA+DS EKW  LSLS
Sbjct: 135 MDLQTSADKDWKEEILLVLPSALAFALSFAIDSAEKWKNLSLS 177

[Close]

BLAST of MC11g_new0073 vs. NCBI nr
Match: KAF5178800.1 (hypothetical protein FRX31_031612 [Thalictrum thalictroides])

HSP 1 Score: 47.4 bits (111), Expect = 7.23e-05
Identity = 24/43 (55.81%), Postives = 29/43 (67.44%), Query Frame = 0


Query: 1  MDLHTSAHNAWKDEISLVPHSALALAFSFAMDSFEKWNTLSLS 43
          MDL  +A  AWKDEI +V HS  AL  S A++S E WN +SLS
Sbjct: 1  MDLQINALKAWKDEILVVLHSEFALDLSRAVESAEIWNIISLS 43

[Close]

BLAST of MC11g_new0073 vs. NCBI nr
Match: KAG5542101.1 (hypothetical protein RHGRI_021828 [Rhododendron griersonianum])

HSP 1 Score: 48.1 bits (113), Expect = 9.05e-05
Identity = 24/41 (58.54%), Postives = 27/41 (65.85%), Query Frame = 0


Query: 3   LHTSAHNAWKDEISLVPHSALALAFSFAMDSFEKWNTLSLS 43
           L TSA  AW  EI +V HS LA A SFAMD  +KW  L+LS
Sbjct: 117 LQTSADTAWNGEILVVLHSELAFALSFAMDFNDKWKILTLS 157

[Close]

BLAST of MC11g_new0073 vs. ExPASy TrEMBL
Match: A0A371EEZ8 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_56839 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 5.34e-09
Identity = 29/43 (67.44%), Postives = 33/43 (76.74%), Query Frame = 0


Query: 1   MDLHTSAHNAWKDEISLVPHSALALAFSFAMDSFEKWNTLSLS 43
           MDL TSA N W ++I LV +S LA AFSFA+DS EKW TLSLS
Sbjct: 121 MDLQTSADNDWNEDILLVFNSELAFAFSFAIDSAEKWKTLSLS 163

[Close]

BLAST of MC11g_new0073 vs. ExPASy TrEMBL
Match: A0A2P5CVG2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_119700 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.15e-08
Identity = 29/43 (67.44%), Postives = 31/43 (72.09%), Query Frame = 0


Query: 1   MDLHTSAHNAWKDEISLVPHSALALAFSFAMDSFEKWNTLSLS 43
           MDL TSA   WK+EI LV  SALA A SFA+DS EKW  LSLS
Sbjct: 135 MDLQTSADKDWKEEILLVLPSALAFALSFAIDSAEKWKNLSLS 177

[Close]

BLAST of MC11g_new0073 vs. ExPASy TrEMBL
Match: A0A2P5F8U7 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_099580 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.15e-08
Identity = 29/43 (67.44%), Postives = 31/43 (72.09%), Query Frame = 0


Query: 1   MDLHTSAHNAWKDEISLVPHSALALAFSFAMDSFEKWNTLSLS 43
           MDL TSA   WK+EI LV  SALA A SFA+DS EKW  LSLS
Sbjct: 135 MDLQTSADKDWKEEILLVLPSALAFALSFAIDSTEKWKNLSLS 177

[Close]

BLAST of MC11g_new0073 vs. ExPASy TrEMBL
Match: A0A7C9D886 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.01e-06
Identity = 25/43 (58.14%), Postives = 30/43 (69.77%), Query Frame = 0


Query: 1  MDLHTSAHNAWKDEISLVPHSALALAFSFAMDSFEKWNTLSLS 43
          MDLH SA  AW +EIS   HS+LALA S A+ + EKW  LSL+
Sbjct: 1  MDLHKSADKAWNEEISRASHSSLALALSAAIAAGEKWKILSLN 43

[Close]

BLAST of MC11g_new0073 vs. ExPASy TrEMBL
Match: A0A7C9DAT6 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.84e-06
Identity = 24/43 (55.81%), Postives = 30/43 (69.77%), Query Frame = 0


Query: 1  MDLHTSAHNAWKDEISLVPHSALALAFSFAMDSFEKWNTLSLS 43
          MDLH SA  AW +E+S   HS+LALA S A+ + EKW  LSL+
Sbjct: 1  MDLHKSADKAWNEEMSRASHSSLALALSAAIAAGEKWKILSLN 43

The following BLAST results are available for this feature:

BLAST of MC11g_new0073 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g_new0073 vs. NCBI nr


Match Name	E-value	Identity	Description
RDX64586.1	1.10e-08	67.44	hypothetical protein CR513_56839, partial [Mucuna pruriens]	[more]
PON94220.1	1.06e-07	67.44	LOW QUALITY PROTEIN: hypothetical protein TorRG33x02_099580 [Trema orientale]	[more]
PON65053.1	1.06e-07	67.44	LOW QUALITY PROTEIN: hypothetical protein PanWU01x14_119700 [Parasponia anderson...	[more]
KAF5178800.1	7.23e-05	55.81	hypothetical protein FRX31_031612 [Thalictrum thalictroides]	[more]
KAG5542101.1	9.05e-05	58.54	hypothetical protein RHGRI_021828 [Rhododendron griersonianum]	[more]

BLAST of MC11g_new0073 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A371EEZ8	5.34e-09	67.44	Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_56839 P...	[more]
A0A2P5CVG2	5.15e-08	67.44	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_119700 PE...	[more]
A0A2P5F8U7	5.15e-08	67.44	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_099580 PE=4 SV...	[more]
A0A7C9D886	1.01e-06	58.14	Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1	[more]
A0A7C9DAT6	2.84e-06	55.81	Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1	[more]

BLAST of MC11g_new0073 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g_new0073.1	MC11g_new0073.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
cellular_component	GO:0016020	membrane