MC11g_new0004 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g_new0004
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	ARID domain-containing protein
Location	MC11: 203903 .. 204958 (-)
RNA-Seq Expression	MC11g_new0004
Synteny	MC11g_new0004

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGATAGCGCGATAACGCGGGGCAAGATTTGCCCCACGGCCTGCCCTGAGTTTGACGATGTCAAAATTCATGATCATCCATGTCTTCTAAAACCGATCGACGATGATCACGATATGCTTGATCACCCTGATGTCAACACTGCTGCTGATGCACGAGTTATCGAGGTTGCTCGATGAACCAGGGCTAAAAGTAATGAACATGCCATGGAGACTGATCCCCAAATCGGGAACCAGGATAATCCTTCTGCACCACCCGTTTCATTTGAGATCTCTCTGCCTCCAAATGCTGAAAATAAGAGTGCGACAACCATGAAGAATGTGCGGACTGATATCGAAGTATGTCTTCTGAAAACTCTTCATTGTATCATATTCGGTTTTCTAATGATCAATGAATAAGGGAAACGACAATCTGGCTTCCACCAGTCAATTGGATCTTTTGTGTGAGTGGAGTTTAATAAAGTAAATCCCTCTTTCTTGTTGTGTCAAAATGCAGATGGCCGAAGCTGATGAATCAGGGACACCGGAGGATAGGGTGGCATTTATGAAGGAGATTGAGAATTTCCATAGGGAGAGGGCTCCTAAGTTCTATGGGGAGCCACTAAATTGTTTGAAGTAAGTCTCTTGGTAATATGCATGTAACTGACTCTCTAAACATCAGAATGATTTGATGTTTTGGTTTGTATACTTAATTGTGTATTCTTTTCTCTGGAATGTAGGTTATGGAGAGCTGTCATTAGATTGGGCGGCTATGATGTGGTAGATATGAACTGCTACATAATGAGTTTTTTTTTTTTTTTTTATATATTGTAAGTCTGGACATGAGTAAATAAAGCCTCATGTGTATTGTTTGATGCTTAATGTGATCTTCCATTATTTGATATTGATATAAATATTGCAGATGAAGTACTCTTAATAAAGCAACAATTCGGATGCTACTCCTTTTAAAGACTTATTGTGATGCCTGATCCCACTACCGAGGTCTATTTGCTCTATTAATGAATTTTTAATATTTATTTACACTTTGGGTAGGTGACTGCATCTAAGCGTCTTTGA

mRNA sequence

ATGAATGATAGCGCGATAACGCGGGGCAAGATTTGCCCCACGGCCTGCCCTGAGTTTGACGATGTCAAAATTCATGATCATCCATGTCTTCTAAAACCGATCGACGATGATCACGATATGCTTGATCACCCTGATGTCAACACTGCTGCTGATGCACGAGTTATCGAGGATAATCCTTCTGCACCACCCGTTTCATTTGAGATCTCTCTGCCTCCAAATGCTGAAAATAAGAGTGCGACAACCATGAAGAATGTGCGGACTGATATCGAAATGGCCGAAGCTGATGAATCAGGGACACCGGAGGATAGGGTGGCATTTATGAAGGAGATTGAGAATTTCCATAGGGAGAGGGCTCCTAAGTTCTATGGGGAGCCACTAAATTGTTTGAAGTTATGGAGAGCTGTCATTAGATTGGGCGGCTATGATGTGGTGACTGCATCTAAGCGTCTTTGA

Coding sequence (CDS)

ATGAATGATAGCGCGATAACGCGGGGCAAGATTTGCCCCACGGCCTGCCCTGAGTTTGACGATGTCAAAATTCATGATCATCCATGTCTTCTAAAACCGATCGACGATGATCACGATATGCTTGATCACCCTGATGTCAACACTGCTGCTGATGCACGAGTTATCGAGGATAATCCTTCTGCACCACCCGTTTCATTTGAGATCTCTCTGCCTCCAAATGCTGAAAATAAGAGTGCGACAACCATGAAGAATGTGCGGACTGATATCGAAATGGCCGAAGCTGATGAATCAGGGACACCGGAGGATAGGGTGGCATTTATGAAGGAGATTGAGAATTTCCATAGGGAGAGGGCTCCTAAGTTCTATGGGGAGCCACTAAATTGTTTGAAGTTATGGAGAGCTGTCATTAGATTGGGCGGCTATGATGTGGTGACTGCATCTAAGCGTCTTTGA

Protein sequence

MNDSAITRGKICPTACPEFDDVKIHDHPCLLKPIDDDHDMLDHPDVNTAADARVIEDNPSAPPVSFEISLPPNAENKSATTMKNVRTDIEMAEADESGTPEDRVAFMKEIENFHRERAPKFYGEPLNCLKLWRAVIRLGGYDVVTASKRL

Homology

[Close]

BLAST of MC11g_new0004 vs. ExPASy Swiss-Prot
Match: Q0WNR6 (AT-rich interactive domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=ARID5 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.2e-18
Identity = 51/106 (48.11%), Postives = 70/106 (66.04%), Query Frame = 0


Query: 48  TAADARVIEDNPSAPPVSFEISLPPNAENKSATTMKNVRTDIEMAEADESGTPEDRVAFM 107
           T  ++  ++ +PS+P V      P  +  K  T +    +D E  E DE+G P+D+ AF+
Sbjct: 99  TLGESNPLKGDPSSPHV------PEESVKKWKTWL---LSDAEAREVDEAGAPQDQEAFI 158

Query: 108 KEIENFHRE-----RAPKFYGEPLNCLKLWRAVIRLGGYDVVTASK 149
           KE+E F++E     +APKFYG+PLNCLKLWRAVI+LGGYDVVT SK
Sbjct: 159 KEVEAFNKENFLEFKAPKFYGQPLNCLKLWRAVIKLGGYDVVTTSK 195

[Close]

BLAST of MC11g_new0004 vs. ExPASy Swiss-Prot
Match: C0SUW7 (AT-rich interactive domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=ARID6 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.9e-16
Identity = 42/84 (50.00%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 70  LPPNAENKSATTMKNVRTDIEMAEADESGTPEDRVAFMKEIENFHRE-----RAPKFYGE 129
           L P  E ++A   K    D E    DE+GTP ++VAF++E+E F++E     + PKFYG+
Sbjct: 76  LSPKTEGENAKKRKTWLLDSEAQGTDEAGTPVEQVAFLREVEAFYKESFLEFKPPKFYGQ 135

Query: 130 PLNCLKLWRAVIRLGGYDVVTASK 149
           PLN LKLWRAV+ LGGY+VVT +K
Sbjct: 136 PLNILKLWRAVVNLGGYEVVTTNK 159

[Close]

BLAST of MC11g_new0004 vs. ExPASy Swiss-Prot
Match: Q940Y3 (AT-rich interactive domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=ARID3 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 9.5e-16
Identity = 41/64 (64.06%), Postives = 49/64 (76.56%), Query Frame = 0


Query: 90  EMAEADESGTPEDRVAFMKEIENFHRER-----APKFYGEPLNCLKLWRAVIRLGGYDVV 149
           + ++ +ESGT ED+ AFMKE+++F RER      PKFYGE LNCLKLWRAV RLGGYD V
Sbjct: 484 DASDGNESGTEEDQSAFMKELDSFFRERNMDFKPPKFYGEGLNCLKLWRAVTRLGGYDKV 543

[Close]

BLAST of MC11g_new0004 vs. NCBI nr
Match: XP_023525688.1 (AT-rich interactive domain-containing protein 5 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 191 bits (484), Expect = 1.23e-55
Identity = 104/164 (63.41%), Postives = 116/164 (70.73%), Query Frame = 0


Query: 14  TACPEFDDVKIHDHPCLLKPIDDDHDMLDHPDVNTAA-DARVIE---------------- 73
           +ACP F+DV+ H+ PCL KPI+DD D+ DH  V  AA DA+V+E                
Sbjct: 46  SACPMFNDVQFHELPCLQKPIEDDEDLPDHTAVEAAAADAKVVEVALDEPPESKEDAMET 105

Query: 74  -------DNPSAPPVSFEISLPPNAENKSATTMKNVRTDIEMAEADESGTPEDRVAFMKE 133
                  DNPSAPP+S +ISLP NA N+SA  +KN   DIEMAE DESGTPEDRVAFMKE
Sbjct: 106 DPLIGNEDNPSAPPISPDISLPSNAANQSAALVKNAWIDIEMAEGDESGTPEDRVAFMKE 165

Query: 134 IENFHRERA-----PKFYGEPLNCLKLWRAVIRLGGYDVVTASK 148
           IENFHRERA     PKFYGEPLNCLKLWRAVIRLGGYDVVTASK
Sbjct: 166 IENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDVVTASK 209

[Close]

BLAST of MC11g_new0004 vs. NCBI nr
Match: XP_023525687.1 (AT-rich interactive domain-containing protein 5 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 191 bits (484), Expect = 1.43e-55
Identity = 104/164 (63.41%), Postives = 116/164 (70.73%), Query Frame = 0


Query: 14  TACPEFDDVKIHDHPCLLKPIDDDHDMLDHPDVNTAA-DARVIE---------------- 73
           +ACP F+DV+ H+ PCL KPI+DD D+ DH  V  AA DA+V+E                
Sbjct: 46  SACPMFNDVQFHELPCLQKPIEDDEDLPDHTAVEAAAADAKVVEVALDEPPESKEDAMET 105

Query: 74  -------DNPSAPPVSFEISLPPNAENKSATTMKNVRTDIEMAEADESGTPEDRVAFMKE 133
                  DNPSAPP+S +ISLP NA N+SA  +KN   DIEMAE DESGTPEDRVAFMKE
Sbjct: 106 DPLIGNEDNPSAPPISPDISLPSNAANQSAALVKNAWIDIEMAEGDESGTPEDRVAFMKE 165

Query: 134 IENFHRERA-----PKFYGEPLNCLKLWRAVIRLGGYDVVTASK 148
           IENFHRERA     PKFYGEPLNCLKLWRAVIRLGGYDVVTASK
Sbjct: 166 IENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDVVTASK 209

[Close]

BLAST of MC11g_new0004 vs. NCBI nr
Match: KAG6608660.1 (AT-rich interactive domain-containing protein 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 188 bits (477), Expect = 1.41e-54
Identity = 103/166 (62.05%), Postives = 115/166 (69.28%), Query Frame = 0


Query: 14  TACPEFDDVKIHDHPCLLKPIDDDHDMLDHPDVNTAA---DARVIE-------------- 73
           +ACP F+DV+ H+ PCL KPI+DD D+ DH  V  AA   DA+V+E              
Sbjct: 46  SACPMFNDVQFHELPCLQKPIEDDEDLPDHTAVEAAAAAADAKVVEVALDEPLESKEDAM 105

Query: 74  ---------DNPSAPPVSFEISLPPNAENKSATTMKNVRTDIEMAEADESGTPEDRVAFM 133
                    DNPSAPP+S +ISLP NA N+SA  +KN   DIEMAE DESGTPEDRV FM
Sbjct: 106 ETDPPIGNEDNPSAPPISPDISLPSNAANQSAALVKNAWIDIEMAEGDESGTPEDRVEFM 165

Query: 134 KEIENFHRERA-----PKFYGEPLNCLKLWRAVIRLGGYDVVTASK 148
           KEIENFHRERA     PKFYGEPLNCLKLWRAVIRLGGYDVVTASK
Sbjct: 166 KEIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDVVTASK 211

[Close]

BLAST of MC11g_new0004 vs. NCBI nr
Match: XP_022941348.1 (AT-rich interactive domain-containing protein 6 isoform X2 [Cucurbita moschata])

HSP 1 Score: 184 bits (468), Expect = 2.98e-53
Identity = 102/165 (61.82%), Postives = 114/165 (69.09%), Query Frame = 0


Query: 14  TACPEFDDVKIHDHPCLLKPIDDDHDMLDHPDVNTAA--DARVIE--------------- 73
           +ACP F+DV+ H+ PCL K I+DD D+ DH  V  AA  DA+V+E               
Sbjct: 46  SACPMFNDVQFHELPCLQKLIEDDEDLPDHTAVEAAAAADAKVVEVALDEPLESKEDAME 105

Query: 74  --------DNPSAPPVSFEISLPPNAENKSATTMKNVRTDIEMAEADESGTPEDRVAFMK 133
                   DNPSAPP+S +ISLP NA N+SA  +KN   DIEMAE DESGTPEDRV FMK
Sbjct: 106 TDPPIGNEDNPSAPPISPDISLPSNAANQSAALVKNAWIDIEMAEGDESGTPEDRVEFMK 165

Query: 134 EIENFHRERA-----PKFYGEPLNCLKLWRAVIRLGGYDVVTASK 148
           EIENFHRERA     PKFYGEPLNCLKLWRAVIRLGGYDVVTASK
Sbjct: 166 EIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDVVTASK 210

[Close]

BLAST of MC11g_new0004 vs. NCBI nr
Match: XP_022941346.1 (AT-rich interactive domain-containing protein 6 isoform X1 [Cucurbita moschata])

HSP 1 Score: 184 bits (468), Expect = 3.46e-53
Identity = 102/165 (61.82%), Postives = 114/165 (69.09%), Query Frame = 0


Query: 14  TACPEFDDVKIHDHPCLLKPIDDDHDMLDHPDVNTAA--DARVIE--------------- 73
           +ACP F+DV+ H+ PCL K I+DD D+ DH  V  AA  DA+V+E               
Sbjct: 46  SACPMFNDVQFHELPCLQKLIEDDEDLPDHTAVEAAAAADAKVVEVALDEPLESKEDAME 105

Query: 74  --------DNPSAPPVSFEISLPPNAENKSATTMKNVRTDIEMAEADESGTPEDRVAFMK 133
                   DNPSAPP+S +ISLP NA N+SA  +KN   DIEMAE DESGTPEDRV FMK
Sbjct: 106 TDPPIGNEDNPSAPPISPDISLPSNAANQSAALVKNAWIDIEMAEGDESGTPEDRVEFMK 165

Query: 134 EIENFHRERA-----PKFYGEPLNCLKLWRAVIRLGGYDVVTASK 148
           EIENFHRERA     PKFYGEPLNCLKLWRAVIRLGGYDVVTASK
Sbjct: 166 EIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDVVTASK 210

[Close]

BLAST of MC11g_new0004 vs. ExPASy TrEMBL
Match: A0A6J1FRV5 (AT-rich interactive domain-containing protein 6 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111446667 PE=3 SV=1)

HSP 1 Score: 184 bits (468), Expect = 1.44e-53
Identity = 102/165 (61.82%), Postives = 114/165 (69.09%), Query Frame = 0


Query: 14  TACPEFDDVKIHDHPCLLKPIDDDHDMLDHPDVNTAA--DARVIE--------------- 73
           +ACP F+DV+ H+ PCL K I+DD D+ DH  V  AA  DA+V+E               
Sbjct: 46  SACPMFNDVQFHELPCLQKLIEDDEDLPDHTAVEAAAAADAKVVEVALDEPLESKEDAME 105

Query: 74  --------DNPSAPPVSFEISLPPNAENKSATTMKNVRTDIEMAEADESGTPEDRVAFMK 133
                   DNPSAPP+S +ISLP NA N+SA  +KN   DIEMAE DESGTPEDRV FMK
Sbjct: 106 TDPPIGNEDNPSAPPISPDISLPSNAANQSAALVKNAWIDIEMAEGDESGTPEDRVEFMK 165

Query: 134 EIENFHRERA-----PKFYGEPLNCLKLWRAVIRLGGYDVVTASK 148
           EIENFHRERA     PKFYGEPLNCLKLWRAVIRLGGYDVVTASK
Sbjct: 166 EIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDVVTASK 210

[Close]

BLAST of MC11g_new0004 vs. ExPASy TrEMBL
Match: A0A6J1FKV6 (AT-rich interactive domain-containing protein 6 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446667 PE=3 SV=1)

HSP 1 Score: 184 bits (468), Expect = 1.67e-53
Identity = 102/165 (61.82%), Postives = 114/165 (69.09%), Query Frame = 0


Query: 14  TACPEFDDVKIHDHPCLLKPIDDDHDMLDHPDVNTAA--DARVIE--------------- 73
           +ACP F+DV+ H+ PCL K I+DD D+ DH  V  AA  DA+V+E               
Sbjct: 46  SACPMFNDVQFHELPCLQKLIEDDEDLPDHTAVEAAAAADAKVVEVALDEPLESKEDAME 105

Query: 74  --------DNPSAPPVSFEISLPPNAENKSATTMKNVRTDIEMAEADESGTPEDRVAFMK 133
                   DNPSAPP+S +ISLP NA N+SA  +KN   DIEMAE DESGTPEDRV FMK
Sbjct: 106 TDPPIGNEDNPSAPPISPDISLPSNAANQSAALVKNAWIDIEMAEGDESGTPEDRVEFMK 165

Query: 134 EIENFHRERA-----PKFYGEPLNCLKLWRAVIRLGGYDVVTASK 148
           EIENFHRERA     PKFYGEPLNCLKLWRAVIRLGGYDVVTASK
Sbjct: 166 EIENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDVVTASK 210

[Close]

BLAST of MC11g_new0004 vs. ExPASy TrEMBL
Match: A0A6J1J3M7 (AT-rich interactive domain-containing protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111480982 PE=3 SV=1)

HSP 1 Score: 184 bits (466), Expect = 2.68e-53
Identity = 103/164 (62.80%), Postives = 114/164 (69.51%), Query Frame = 0


Query: 14  TACPEFDDVKIHDHPCLLKPIDDDHDMLDHPDVNTAA-DARVIE---------------- 73
           +ACP F+D   H+ PCL KPI+DD D+ DH  V  AA DA+V+E                
Sbjct: 46  SACPMFND--FHELPCLQKPIEDDEDLPDHTAVEAAAADAKVVEVALDEPPESKEDAMET 105

Query: 74  -------DNPSAPPVSFEISLPPNAENKSATTMKNVRTDIEMAEADESGTPEDRVAFMKE 133
                  DNPSAPP+S +ISLP NA N+SA  +KN   DIEMAE DESGTPEDRVAFMKE
Sbjct: 106 DPPIGNEDNPSAPPISPDISLPSNAANQSAALVKNAWIDIEMAEGDESGTPEDRVAFMKE 165

Query: 134 IENFHRERA-----PKFYGEPLNCLKLWRAVIRLGGYDVVTASK 148
           IENFHRERA     PKFYGEPLNCLKLWRAVIRLGGYDVVTASK
Sbjct: 166 IENFHRERALEFKPPKFYGEPLNCLKLWRAVIRLGGYDVVTASK 207

[Close]

BLAST of MC11g_new0004 vs. ExPASy TrEMBL
Match: A0A2P2KFP3 (Uncharacterized protein MANES_05G129200 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 118 bits (296), Expect = 7.64e-30
Identity = 58/82 (70.73%), Postives = 67/82 (81.71%), Query Frame = 0


Query: 72  PNAENKSATTMKNVRTDIEMAEADESGTPEDRVAFMKEIENFHRERA-----PKFYGEPL 131
           P A+++S    K+V TDIEM EADESGTPE+R AFMKE+E FHR+ A     PKFYGEPL
Sbjct: 113 PKAKHESGARSKSVWTDIEMGEADESGTPEERAAFMKELETFHRDNALEFKPPKFYGEPL 172

Query: 132 NCLKLWRAVIRLGGYDVVTASK 148
           NCLKLWRAVI+LGGY+VVTASK
Sbjct: 173 NCLKLWRAVIKLGGYEVVTASK 194

[Close]

BLAST of MC11g_new0004 vs. ExPASy TrEMBL
Match: A0A2P2KFL3 (Transcription factor OS=Rhizophora mucronata OX=61149 PE=3 SV=1)

HSP 1 Score: 118 bits (296), Expect = 1.47e-28
Identity = 58/82 (70.73%), Postives = 67/82 (81.71%), Query Frame = 0


Query: 72  PNAENKSATTMKNVRTDIEMAEADESGTPEDRVAFMKEIENFHRERA-----PKFYGEPL 131
           P A+++S    K+V TDIEM EADESGTPE+R AFMKE+E FHR+ A     PKFYGEPL
Sbjct: 113 PKAKHESGARSKSVWTDIEMGEADESGTPEERAAFMKELETFHRDNALEFKPPKFYGEPL 172

Query: 132 NCLKLWRAVIRLGGYDVVTASK 148
           NCLKLWRAVI+LGGY+VVTASK
Sbjct: 173 NCLKLWRAVIKLGGYEVVTASK 194

[Close]

BLAST of MC11g_new0004 vs. TAIR 10
Match: AT1G76510.1 (ARID/BRIGHT DNA-binding domain-containing protein )

HSP 1 Score: 94.4 bits (233), Expect = 8.5e-20
Identity = 51/106 (48.11%), Postives = 70/106 (66.04%), Query Frame = 0


Query: 48  TAADARVIEDNPSAPPVSFEISLPPNAENKSATTMKNVRTDIEMAEADESGTPEDRVAFM 107
           T  ++  ++ +PS+P V      P  +  K  T +    +D E  E DE+G P+D+ AF+
Sbjct: 99  TLGESNPLKGDPSSPHV------PEESVKKWKTWL---LSDAEAREVDEAGAPQDQEAFI 158

Query: 108 KEIENFHRE-----RAPKFYGEPLNCLKLWRAVIRLGGYDVVTASK 149
           KE+E F++E     +APKFYG+PLNCLKLWRAVI+LGGYDVVT SK
Sbjct: 159 KEVEAFNKENFLEFKAPKFYGQPLNCLKLWRAVIKLGGYDVVTTSK 195

[Close]

BLAST of MC11g_new0004 vs. TAIR 10
Match: AT1G76510.2 (ARID/BRIGHT DNA-binding domain-containing protein )

HSP 1 Score: 94.4 bits (233), Expect = 8.5e-20
Identity = 51/106 (48.11%), Postives = 70/106 (66.04%), Query Frame = 0


Query: 48  TAADARVIEDNPSAPPVSFEISLPPNAENKSATTMKNVRTDIEMAEADESGTPEDRVAFM 107
           T  ++  ++ +PS+P V      P  +  K  T +    +D E  E DE+G P+D+ AF+
Sbjct: 99  TLGESNPLKGDPSSPHV------PEESVKKWKTWL---LSDAEAREVDEAGAPQDQEAFI 158

Query: 108 KEIENFHRE-----RAPKFYGEPLNCLKLWRAVIRLGGYDVVTASK 149
           KE+E F++E     +APKFYG+PLNCLKLWRAVI+LGGYDVVT SK
Sbjct: 159 KEVEAFNKENFLEFKAPKFYGQPLNCLKLWRAVIKLGGYDVVTTSK 195

[Close]

BLAST of MC11g_new0004 vs. TAIR 10
Match: AT1G76510.3 (ARID/BRIGHT DNA-binding domain-containing protein )

HSP 1 Score: 94.4 bits (233), Expect = 8.5e-20
Identity = 51/106 (48.11%), Postives = 70/106 (66.04%), Query Frame = 0


Query: 48  TAADARVIEDNPSAPPVSFEISLPPNAENKSATTMKNVRTDIEMAEADESGTPEDRVAFM 107
           T  ++  ++ +PS+P V      P  +  K  T +    +D E  E DE+G P+D+ AF+
Sbjct: 99  TLGESNPLKGDPSSPHV------PEESVKKWKTWL---LSDAEAREVDEAGAPQDQEAFI 158

Query: 108 KEIENFHRE-----RAPKFYGEPLNCLKLWRAVIRLGGYDVVTASK 149
           KE+E F++E     +APKFYG+PLNCLKLWRAVI+LGGYDVVT SK
Sbjct: 159 KEVEAFNKENFLEFKAPKFYGQPLNCLKLWRAVIKLGGYDVVTTSK 195

[Close]

BLAST of MC11g_new0004 vs. TAIR 10
Match: AT1G20910.1 (ARID/BRIGHT DNA-binding domain-containing protein )

HSP 1 Score: 87.0 bits (214), Expect = 1.4e-17
Identity = 42/84 (50.00%), Postives = 57/84 (67.86%), Query Frame = 0


Query: 70  LPPNAENKSATTMKNVRTDIEMAEADESGTPEDRVAFMKEIENFHRE-----RAPKFYGE 129
           L P  E ++A   K    D E    DE+GTP ++VAF++E+E F++E     + PKFYG+
Sbjct: 76  LSPKTEGENAKKRKTWLLDSEAQGTDEAGTPVEQVAFLREVEAFYKESFLEFKPPKFYGQ 135

Query: 130 PLNCLKLWRAVIRLGGYDVVTASK 149
           PLN LKLWRAV+ LGGY+VVT +K
Sbjct: 136 PLNILKLWRAVVNLGGYEVVTTNK 159

[Close]

BLAST of MC11g_new0004 vs. TAIR 10
Match: AT2G17410.1 (ARID/BRIGHT DNA-binding domain-containing protein )

HSP 1 Score: 84.7 bits (208), Expect = 6.8e-17
Identity = 41/64 (64.06%), Postives = 49/64 (76.56%), Query Frame = 0


Query: 90  EMAEADESGTPEDRVAFMKEIENFHRER-----APKFYGEPLNCLKLWRAVIRLGGYDVV 149
           + ++ +ESGT ED+ AFMKE+++F RER      PKFYGE LNCLKLWRAV RLGGYD V
Sbjct: 484 DASDGNESGTEEDQSAFMKELDSFFRERNMDFKPPKFYGEGLNCLKLWRAVTRLGGYDKV 543

The following BLAST results are available for this feature:

BLAST of MC11g_new0004 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0WNR6	1.2e-18	48.11	AT-rich interactive domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 ...	[more]
C0SUW7	1.9e-16	50.00	AT-rich interactive domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q940Y3	9.5e-16	64.06	AT-rich interactive domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of MC11g_new0004 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023525688.1	1.23e-55	63.41	AT-rich interactive domain-containing protein 5 isoform X2 [Cucurbita pepo subsp...	[more]
XP_023525687.1	1.43e-55	63.41	AT-rich interactive domain-containing protein 5 isoform X1 [Cucurbita pepo subsp...	[more]
KAG6608660.1	1.41e-54	62.05	AT-rich interactive domain-containing protein 5, partial [Cucurbita argyrosperma...	[more]
XP_022941348.1	2.98e-53	61.82	AT-rich interactive domain-containing protein 6 isoform X2 [Cucurbita moschata]	[more]
XP_022941346.1	3.46e-53	61.82	AT-rich interactive domain-containing protein 6 isoform X1 [Cucurbita moschata]	[more]

BLAST of MC11g_new0004 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FRV5	1.44e-53	61.82	AT-rich interactive domain-containing protein 6 isoform X2 OS=Cucurbita moschata...	[more]
A0A6J1FKV6	1.67e-53	61.82	AT-rich interactive domain-containing protein 6 isoform X1 OS=Cucurbita moschata...	[more]
A0A6J1J3M7	2.68e-53	62.80	AT-rich interactive domain-containing protein 6 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A2P2KFP3	7.64e-30	70.73	Uncharacterized protein MANES_05G129200 OS=Rhizophora mucronata OX=61149 PE=4 SV...	[more]
A0A2P2KFL3	1.47e-28	70.73	Transcription factor OS=Rhizophora mucronata OX=61149 PE=3 SV=1	[more]

BLAST of MC11g_new0004 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76510.1	8.5e-20	48.11	ARID/BRIGHT DNA-binding domain-containing protein	[more]
AT1G76510.2	8.5e-20	48.11	ARID/BRIGHT DNA-binding domain-containing protein	[more]
AT1G76510.3	8.5e-20	48.11	ARID/BRIGHT DNA-binding domain-containing protein	[more]
AT1G20910.1	1.4e-17	50.00	ARID/BRIGHT DNA-binding domain-containing protein	[more]
AT2G17410.1	6.8e-17	64.06	ARID/BRIGHT DNA-binding domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036431	ARID DNA-binding domain superfamily	GENE3D	1.10.150.60		coord: 83..150 e-value: 1.4E-9 score: 39.4
IPR036431	ARID DNA-binding domain superfamily	SUPERFAMILY	46774	ARID-like	coord: 92..148
IPR001606	ARID DNA-binding domain	PFAM	PF01388	ARID	coord: 104..147 e-value: 7.4E-7 score: 29.8
IPR001606	ARID DNA-binding domain	PROSITE	PS51011	ARID	coord: 93..150 score: 10.191633
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..82
None	No IPR available	PANTHER	PTHR15348:SF17	AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 5	coord: 59..148
None	No IPR available	CDD	cd16100	ARID	coord: 102..149 e-value: 3.13589E-12 score: 56.9824
IPR045147	AT-rich interactive domain-containing protein 3	PANTHER	PTHR15348	AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT	coord: 59..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g_new0004.1	MC11g_new0004.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding