MC11g1314 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC11g1314
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUbiquitin-like-specific protease ESD4 isoform X2
LocationMC11: 15963200 .. 15963328 (-)
RNA-Seq ExpressionMC11g1314
SyntenyMC11g1314
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGTGCATATACTCATTGACCGAATGTGTTGCTAATCGTTTGAACGATGATGCAGTCCCGCACATTCTTCGGTGGTCGTGCTCCCATTCACCTGCATACAATGTTCTTCAAACGTATATATTTGGATCC

mRNA sequence

GAGTGCATATACTCATTGACCGAATGTGTTGCTAATCGTTTGAACGATGATGCAGTCCCGCACATTCTTCGGTGGTCGTGCTCCCATTCACCTGCATACAATGTTCTTCAAACGTATATATTTGGATCC

Coding sequence (CDS)

GAGTGCATATACTCATTGACCGAATGTGTTGCTAATCGTTTGAACGATGATGCAGTCCCGCACATTCTTCGGTGGTCGTGCTCCCATTCACCTGCATACAATGTTCTTCAAACGTATATATTTGGATCC

Protein sequence

ECIYSLTECVANRLNDDAVPHILRWSCSHSPAYNVLQTYIFGS
Homology
BLAST of MC11g1314 vs. NCBI nr
Match: XP_022136676.1 (uncharacterized protein LOC111008328 [Momordica charantia])

HSP 1 Score: 52.0 bits (123), Expect = 2.01e-06
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 0

Query: 1  ECIYSLTECVANRLNDDAVPHILRWSCSHSPAYNVLQTYIF 41
          E I +L+  VA RLNDDA+P +LRWSC++S A+NVL+  +F
Sbjct: 24 ETISTLSTRVALRLNDDAIPRLLRWSCTYSRAFNVLEREVF 64

BLAST of MC11g1314 vs. NCBI nr
Match: XP_022157020.1 (uncharacterized protein LOC111023847 [Momordica charantia])

HSP 1 Score: 52.0 bits (123), Expect = 4.50e-06
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 0

Query: 1   ECIYSLTECVANRLNDDAVPHILRWSCSHSPAYNVLQTYIF 41
           E I +L+  VA RLNDDA+P +LRWSC++S A+NVL+  +F
Sbjct: 240 ETISTLSTRVALRLNDDAIPRLLRWSCTYSRAFNVLEREVF 280

BLAST of MC11g1314 vs. NCBI nr
Match: XP_022154965.1 (uncharacterized protein LOC111022110 [Momordica charantia])

HSP 1 Score: 52.0 bits (123), Expect = 4.71e-06
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 0

Query: 1   ECIYSLTECVANRLNDDAVPHILRWSCSHSPAYNVLQTYIF 41
           E I +L+  VA RLNDDA+P +LRWSC++S A+NVL+  +F
Sbjct: 81  ETISTLSTRVALRLNDDAIPRLLRWSCTYSRAFNVLEREVF 121

BLAST of MC11g1314 vs. NCBI nr
Match: TYK08436.1 (ubiquitin-like-specific protease ESD4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 50.1 bits (118), Expect = 1.16e-05
Identity = 19/43 (44.19%), Postives = 29/43 (67.44%), Query Frame = 0

Query: 1  ECIYSLTECVANRLNDDAVPHILRWSCSHSPAYNVLQTYIFGS 43
          E I ++T C  +++NDDA+P +LRW C  SP  N +Q+ +F S
Sbjct: 30 ESIPTITRCSVDKVNDDAIPRMLRWVCQQSPKSNTIQSQVFDS 72

BLAST of MC11g1314 vs. NCBI nr
Match: KAA0060123.1 (ubiquitin-like-specific protease ESD4 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 50.1 bits (118), Expect = 1.16e-05
Identity = 19/43 (44.19%), Postives = 29/43 (67.44%), Query Frame = 0

Query: 1  ECIYSLTECVANRLNDDAVPHILRWSCSHSPAYNVLQTYIFGS 43
          E I ++T C  +++NDDA+P +LRW C  SP  N +Q+ +F S
Sbjct: 30 ESIPTITRCSVDKVNDDAIPRMLRWVCQQSPKSNTIQSQVFDS 72

BLAST of MC11g1314 vs. ExPASy TrEMBL
Match: A0A6J1C463 (uncharacterized protein LOC111008328 OS=Momordica charantia OX=3673 GN=LOC111008328 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 9.72e-07
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 0

Query: 1  ECIYSLTECVANRLNDDAVPHILRWSCSHSPAYNVLQTYIF 41
          E I +L+  VA RLNDDA+P +LRWSC++S A+NVL+  +F
Sbjct: 24 ETISTLSTRVALRLNDDAIPRLLRWSCTYSRAFNVLEREVF 64

BLAST of MC11g1314 vs. ExPASy TrEMBL
Match: A0A6J1DRZ7 (uncharacterized protein LOC111023847 OS=Momordica charantia OX=3673 GN=LOC111023847 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 2.18e-06
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 0

Query: 1   ECIYSLTECVANRLNDDAVPHILRWSCSHSPAYNVLQTYIF 41
           E I +L+  VA RLNDDA+P +LRWSC++S A+NVL+  +F
Sbjct: 240 ETISTLSTRVALRLNDDAIPRLLRWSCTYSRAFNVLEREVF 280

BLAST of MC11g1314 vs. ExPASy TrEMBL
Match: A0A6J1DL40 (uncharacterized protein LOC111022110 OS=Momordica charantia OX=3673 GN=LOC111022110 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 2.28e-06
Identity = 23/41 (56.10%), Postives = 32/41 (78.05%), Query Frame = 0

Query: 1   ECIYSLTECVANRLNDDAVPHILRWSCSHSPAYNVLQTYIF 41
           E I +L+  VA RLNDDA+P +LRWSC++S A+NVL+  +F
Sbjct: 81  ETISTLSTRVALRLNDDAIPRLLRWSCTYSRAFNVLEREVF 121

BLAST of MC11g1314 vs. ExPASy TrEMBL
Match: A0A5A7UVX3 (Ubiquitin-like-specific protease ESD4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold39G00430 PE=4 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 5.62e-06
Identity = 19/43 (44.19%), Postives = 29/43 (67.44%), Query Frame = 0

Query: 1  ECIYSLTECVANRLNDDAVPHILRWSCSHSPAYNVLQTYIFGS 43
          E I ++T C  +++NDDA+P +LRW C  SP  N +Q+ +F S
Sbjct: 30 ESIPTITRCSVDKVNDDAIPRMLRWVCQQSPKSNTIQSQVFDS 72

BLAST of MC11g1314 vs. ExPASy TrEMBL
Match: A0A5D3CDL2 (Ubiquitin-like-specific protease ESD4 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold654G00520 PE=4 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 5.62e-06
Identity = 19/43 (44.19%), Postives = 29/43 (67.44%), Query Frame = 0

Query: 1  ECIYSLTECVANRLNDDAVPHILRWSCSHSPAYNVLQTYIFGS 43
          E I ++T C  +++NDDA+P +LRW C  SP  N +Q+ +F S
Sbjct: 30 ESIPTITRCSVDKVNDDAIPRMLRWVCQQSPKSNTIQSQVFDS 72

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022136676.12.01e-0656.10uncharacterized protein LOC111008328 [Momordica charantia][more]
XP_022157020.14.50e-0656.10uncharacterized protein LOC111023847 [Momordica charantia][more]
XP_022154965.14.71e-0656.10uncharacterized protein LOC111022110 [Momordica charantia][more]
TYK08436.11.16e-0544.19ubiquitin-like-specific protease ESD4 isoform X2 [Cucumis melo var. makuwa][more]
KAA0060123.11.16e-0544.19ubiquitin-like-specific protease ESD4 isoform X2 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A6J1C4639.72e-0756.10uncharacterized protein LOC111008328 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
A0A6J1DRZ72.18e-0656.10uncharacterized protein LOC111023847 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DL402.28e-0656.10uncharacterized protein LOC111022110 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A5A7UVX35.62e-0644.19Ubiquitin-like-specific protease ESD4 isoform X2 OS=Cucumis melo var. makuwa OX=... [more]
A0A5D3CDL25.62e-0644.19Ubiquitin-like-specific protease ESD4 isoform X2 OS=Cucumis melo var. makuwa OX=... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC11g1314.1MC11g1314.1mRNA