MC11g1233 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC11g1233
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC11: 12590686 .. 12591171 (-)
RNA-Seq ExpressionMC11g1233
SyntenyMC11g1233
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGTTGACGACGACTTCAGCTTCCCCACCGCCGCGGATCCCTTCAACCGCTGCGGCATCGATTCGCCGCCGCTCTGGCGCCTCTCTCCCGCCACCGACCGCAATCGCCGCGGCACGGCGGCGGACGGCGACGGTGATCTGAAGATCAAGATCAACGACCGCCGCTTCAAATCCGCGGCGCCGACGCAGAGGAGAAGGAGATTCTCGAGCGATGCGGCGGCGGAGGAGGAAGAGGCGGCGGAGAAGATGGACGTGCTGTGGGAGAATTTCAACGAGGAGTTGTCGAGGAGCCGGAGATCGAAATCGCCGGAATCGATGGAGGAGATCGTGAAGGCGCGGCGGATGGCGGAATTGAGCCTGTCGGAGAGTTCCGGCGCGGTGGCGACGGCGAGGAAGACGGGGAAGACGGTGATTGTGAAGGCTCTGAAGAAACTGTTCTTGCTTCATCACAATTCCCGCCGGAAGCTTCAAACTCCATCGCGG

mRNA sequence

ATGGCCGTTGACGACGACTTCAGCTTCCCCACCGCCGCGGATCCCTTCAACCGCTGCGGCATCGATTCGCCGCCGCTCTGGCGCCTCTCTCCCGCCACCGACCGCAATCGCCGCGGCACGGCGGCGGACGGCGACGGTGATCTGAAGATCAAGATCAACGACCGCCGCTTCAAATCCGCGGCGCCGACGCAGAGGAGAAGGAGATTCTCGAGCGATGCGGCGGCGGAGGAGGAAGAGGCGGCGGAGAAGATGGACGTGCTGTGGGAGAATTTCAACGAGGAGTTGTCGAGGAGCCGGAGATCGAAATCGCCGGAATCGATGGAGGAGATCGTGAAGGCGCGGCGGATGGCGGAATTGAGCCTGTCGGAGAGTTCCGGCGCGGTGGCGACGGCGAGGAAGACGGGGAAGACGGTGATTGTGAAGGCTCTGAAGAAACTGTTCTTGCTTCATCACAATTCCCGCCGGAAGCTTCAAACTCCATCGCGG

Coding sequence (CDS)

ATGGCCGTTGACGACGACTTCAGCTTCCCCACCGCCGCGGATCCCTTCAACCGCTGCGGCATCGATTCGCCGCCGCTCTGGCGCCTCTCTCCCGCCACCGACCGCAATCGCCGCGGCACGGCGGCGGACGGCGACGGTGATCTGAAGATCAAGATCAACGACCGCCGCTTCAAATCCGCGGCGCCGACGCAGAGGAGAAGGAGATTCTCGAGCGATGCGGCGGCGGAGGAGGAAGAGGCGGCGGAGAAGATGGACGTGCTGTGGGAGAATTTCAACGAGGAGTTGTCGAGGAGCCGGAGATCGAAATCGCCGGAATCGATGGAGGAGATCGTGAAGGCGCGGCGGATGGCGGAATTGAGCCTGTCGGAGAGTTCCGGCGCGGTGGCGACGGCGAGGAAGACGGGGAAGACGGTGATTGTGAAGGCTCTGAAGAAACTGTTCTTGCTTCATCACAATTCCCGCCGGAAGCTTCAAACTCCATCGCGG

Protein sequence

MAVDDDFSFPTAADPFNRCGIDSPPLWRLSPATDRNRRGTAADGDGDLKIKINDRRFKSAAPTQRRRRFSSDAAAEEEEAAEKMDVLWENFNEELSRSRRSKSPESMEEIVKARRMAELSLSESSGAVATARKTGKTVIVKALKKLFLLHHNSRRKLQTPSR
Homology
BLAST of MC11g1233 vs. NCBI nr
Match: KAA0061271.1 (uncharacterized protein E6C27_scaffold455G001140 [Cucumis melo var. makuwa] >TYK09851.1 uncharacterized protein E5676_scaffold39G00190 [Cucumis melo var. makuwa])

HSP 1 Score: 178 bits (451), Expect = 9.89e-54
Identity = 117/186 (62.90%), Postives = 130/186 (69.89%), Query Frame = 0

Query: 1   MAVDDDFSFPTAADPFNRCGIDSPPLWRLSPAT-----------DRNRRGTAADGDGDLK 60
           MAV+DDFSFPTA +PFNRCGIDSPPLWRLSP+            DRN R TA+DG+    
Sbjct: 1   MAVEDDFSFPTALEPFNRCGIDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEIS-- 60

Query: 61  IKINDRRFKSAAPTQRRRRFSSDAAA-------EEEEAAEKMDVLWENFNEELSRSRRSK 120
                 RF SA+  QRRRRF SDAA        EEE  AEKMDVLWENFNEELSRSRRS+
Sbjct: 61  -----NRFPSAS-FQRRRRFLSDAAVNGEEEEEEEEAVAEKMDVLWENFNEELSRSRRSR 120

Query: 121 SPESME----EIVKAR-RMAELSLSESSGAVATARK-TGKTVIVKALKKLFLLHHNSRRK 162
             ++ E    EIVKAR RMAEL+L E+SGA+AT RK TGKT  VK LKKLFL+H NSRR 
Sbjct: 121 LMKTAELEENEIVKARQRMAELNLPETSGAMATRRKATGKTAFVKVLKKLFLMHSNSRRN 178

BLAST of MC11g1233 vs. NCBI nr
Match: XP_016902690.1 (PREDICTED: uncharacterized protein LOC103500054 isoform X2 [Cucumis melo])

HSP 1 Score: 176 bits (447), Expect = 3.88e-53
Identity = 115/185 (62.16%), Postives = 130/185 (70.27%), Query Frame = 0

Query: 1   MAVDDDFSFPTAADPFNRCGIDSPPLWRLSPAT-----------DRNRRGTAADGDGDLK 60
           MAV+DDFSFPTA +PFNRCG+DSPPLWRLSP+            DRN R TA+DG+    
Sbjct: 1   MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEIS-- 60

Query: 61  IKINDRRFKSAAPTQRRRRFSSDAAA------EEEEAAEKMDVLWENFNEELSRSRRSKS 120
                 RF SA+  QRRRRF SDAA       EEE  AEKMDVLWENFNEELSRSRRS+ 
Sbjct: 61  -----NRFPSAS-FQRRRRFLSDAAVNGEEEEEEEAVAEKMDVLWENFNEELSRSRRSRL 120

Query: 121 PESME----EIVKAR-RMAELSLSESSGAVATARK-TGKTVIVKALKKLFLLHHNSRRKL 162
            ++ E    EIVKAR RMAEL+L E+SGA+AT RK TGKT  VK LKKLFL+H +SRR L
Sbjct: 121 MKTAELEENEIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRNL 177

BLAST of MC11g1233 vs. NCBI nr
Match: XP_008461465.1 (PREDICTED: uncharacterized protein LOC103500054 isoform X1 [Cucumis melo])

HSP 1 Score: 176 bits (446), Expect = 5.68e-53
Identity = 115/186 (61.83%), Postives = 130/186 (69.89%), Query Frame = 0

Query: 1   MAVDDDFSFPTAADPFNRCGIDSPPLWRLSPAT-----------DRNRRGTAADGDGDLK 60
           MAV+DDFSFPTA +PFNRCG+DSPPLWRLSP+            DRN R TA+DG+    
Sbjct: 1   MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEIS-- 60

Query: 61  IKINDRRFKSAAPTQRRRRFSSDAAA-------EEEEAAEKMDVLWENFNEELSRSRRSK 120
                 RF SA+  QRRRRF SDAA        EEE  AEKMDVLWENFNEELSRSRRS+
Sbjct: 61  -----NRFPSAS-FQRRRRFLSDAAVNGEEEEEEEEAVAEKMDVLWENFNEELSRSRRSR 120

Query: 121 SPESME----EIVKAR-RMAELSLSESSGAVATARK-TGKTVIVKALKKLFLLHHNSRRK 162
             ++ E    EIVKAR RMAEL+L E+SGA+AT RK TGKT  VK LKKLFL+H +SRR 
Sbjct: 121 LMKTAELEENEIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRN 178

BLAST of MC11g1233 vs. NCBI nr
Match: XP_038899254.1 (uncharacterized protein LOC120086596 [Benincasa hispida])

HSP 1 Score: 175 bits (444), Expect = 1.11e-52
Identity = 116/184 (63.04%), Postives = 127/184 (69.02%), Query Frame = 0

Query: 1   MAVDDDFSFPTAADPFNRCGIDSPPLWRLSPAT-----------DRNRRGTAADGDGDLK 60
           MAV+DDFSFPTA +P +RCGIDSPPLWRLSPAT           D N R TAADG     
Sbjct: 1   MAVEDDFSFPTALEPLSRCGIDSPPLWRLSPATSPISYRQQTSCDWNFRDTAADGG---- 60

Query: 61  IKINDRRFKSAAPTQ--RRRRFSSDAAAEEEEAA---EKMDVLWENFNEELSRSRRSKSP 120
              N  RF S   T   +RRRFSSDA  EEE AA   EKMDVLWENFNEELSRSRRS+  
Sbjct: 61  ---NSDRFPSGRFTASLQRRRFSSDAEEEEETAAAAAEKMDVLWENFNEELSRSRRSRLM 120

Query: 121 ESME----EIVKARR-MAELSLSESSGAVATARK-TGKTVIVKALKKLFLLHHNSRRKLQ 162
           ++ E    EIVK RR M EL+LSE+SG V T RK TGKT  VK LKKLFL+H+NSRR LQ
Sbjct: 121 KTAEMEEIEIVKTRRRMTELNLSETSGTVTTTRKATGKTAFVKVLKKLFLIHNNSRRNLQ 177

BLAST of MC11g1233 vs. NCBI nr
Match: XP_023536234.1 (uncharacterized protein LOC111797464 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 174 bits (440), Expect = 4.34e-52
Identity = 115/177 (64.97%), Postives = 128/177 (72.32%), Query Frame = 0

Query: 1   MAVDDDFSFPTAADPFNRCGIDSPPLWRLSPATD--RNRRGTAADG---DGDLKIKINDR 60
           MAV+DDFSFPTA +PFNRCGIDSPPLWRLSP       R+ TA++    D     +    
Sbjct: 1   MAVEDDFSFPTALEPFNRCGIDSPPLWRLSPTASPISYRQKTASNRSFRDDQKSDRFASV 60

Query: 61  RFKSAAPTQRRRRFSSDAAA-----EEEEAAEKMDVLWENFNEELSRSRRSKSPESME-- 120
           RF  +A  QRRRRFSSDAA      EEE AAEKMDVLWENFNEELSRS RS+  ++ E  
Sbjct: 61  RF--SASLQRRRRFSSDAAMDGEEEEEEVAAEKMDVLWENFNEELSRSGRSRLMKTAEME 120

Query: 121 --EIVKARR-MAELSLSESSGAVATARK-TGKTVIVKALKKLFLLHHNSRRKLQTPS 161
             EIVKARR MAEL+LSE+SGAV T RK TGKT  VKALKKLFLLH+NSRR LQT S
Sbjct: 121 EIEIVKARRRMAELNLSETSGAVVTRRKATGKTAFVKALKKLFLLHNNSRRNLQTRS 175

BLAST of MC11g1233 vs. ExPASy TrEMBL
Match: A0A5A7V6B2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00190 PE=4 SV=1)

HSP 1 Score: 178 bits (451), Expect = 4.79e-54
Identity = 117/186 (62.90%), Postives = 130/186 (69.89%), Query Frame = 0

Query: 1   MAVDDDFSFPTAADPFNRCGIDSPPLWRLSPAT-----------DRNRRGTAADGDGDLK 60
           MAV+DDFSFPTA +PFNRCGIDSPPLWRLSP+            DRN R TA+DG+    
Sbjct: 1   MAVEDDFSFPTALEPFNRCGIDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEIS-- 60

Query: 61  IKINDRRFKSAAPTQRRRRFSSDAAA-------EEEEAAEKMDVLWENFNEELSRSRRSK 120
                 RF SA+  QRRRRF SDAA        EEE  AEKMDVLWENFNEELSRSRRS+
Sbjct: 61  -----NRFPSAS-FQRRRRFLSDAAVNGEEEEEEEEAVAEKMDVLWENFNEELSRSRRSR 120

Query: 121 SPESME----EIVKAR-RMAELSLSESSGAVATARK-TGKTVIVKALKKLFLLHHNSRRK 162
             ++ E    EIVKAR RMAEL+L E+SGA+AT RK TGKT  VK LKKLFL+H NSRR 
Sbjct: 121 LMKTAELEENEIVKARQRMAELNLPETSGAMATRRKATGKTAFVKVLKKLFLMHSNSRRN 178

BLAST of MC11g1233 vs. ExPASy TrEMBL
Match: A0A1S4E3Y6 (uncharacterized protein LOC103500054 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500054 PE=4 SV=1)

HSP 1 Score: 176 bits (447), Expect = 1.88e-53
Identity = 115/185 (62.16%), Postives = 130/185 (70.27%), Query Frame = 0

Query: 1   MAVDDDFSFPTAADPFNRCGIDSPPLWRLSPAT-----------DRNRRGTAADGDGDLK 60
           MAV+DDFSFPTA +PFNRCG+DSPPLWRLSP+            DRN R TA+DG+    
Sbjct: 1   MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEIS-- 60

Query: 61  IKINDRRFKSAAPTQRRRRFSSDAAA------EEEEAAEKMDVLWENFNEELSRSRRSKS 120
                 RF SA+  QRRRRF SDAA       EEE  AEKMDVLWENFNEELSRSRRS+ 
Sbjct: 61  -----NRFPSAS-FQRRRRFLSDAAVNGEEEEEEEAVAEKMDVLWENFNEELSRSRRSRL 120

Query: 121 PESME----EIVKAR-RMAELSLSESSGAVATARK-TGKTVIVKALKKLFLLHHNSRRKL 162
            ++ E    EIVKAR RMAEL+L E+SGA+AT RK TGKT  VK LKKLFL+H +SRR L
Sbjct: 121 MKTAELEENEIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRNL 177

BLAST of MC11g1233 vs. ExPASy TrEMBL
Match: A0A1S3CEP4 (uncharacterized protein LOC103500054 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500054 PE=4 SV=1)

HSP 1 Score: 176 bits (446), Expect = 2.75e-53
Identity = 115/186 (61.83%), Postives = 130/186 (69.89%), Query Frame = 0

Query: 1   MAVDDDFSFPTAADPFNRCGIDSPPLWRLSPAT-----------DRNRRGTAADGDGDLK 60
           MAV+DDFSFPTA +PFNRCG+DSPPLWRLSP+            DRN R TA+DG+    
Sbjct: 1   MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEIS-- 60

Query: 61  IKINDRRFKSAAPTQRRRRFSSDAAA-------EEEEAAEKMDVLWENFNEELSRSRRSK 120
                 RF SA+  QRRRRF SDAA        EEE  AEKMDVLWENFNEELSRSRRS+
Sbjct: 61  -----NRFPSAS-FQRRRRFLSDAAVNGEEEEEEEEAVAEKMDVLWENFNEELSRSRRSR 120

Query: 121 SPESME----EIVKAR-RMAELSLSESSGAVATARK-TGKTVIVKALKKLFLLHHNSRRK 162
             ++ E    EIVKAR RMAEL+L E+SGA+AT RK TGKT  VK LKKLFL+H +SRR 
Sbjct: 121 LMKTAELEENEIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRN 178

BLAST of MC11g1233 vs. ExPASy TrEMBL
Match: A0A0A0K672 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G283910 PE=4 SV=1)

HSP 1 Score: 173 bits (439), Expect = 2.98e-52
Identity = 114/184 (61.96%), Postives = 129/184 (70.11%), Query Frame = 0

Query: 1   MAVDDDFSFPTAADPFNRCGIDSPPLWRLSPAT-----------DRNRRGTAADGDGDLK 60
           MAV++DFSFPTA +PFNRCGIDSPPLW LSP+            D N R TA+DG+    
Sbjct: 1   MAVEEDFSFPTALEPFNRCGIDSPPLWHLSPSASPISYPQQTSCDWNFRDTASDGEIS-- 60

Query: 61  IKINDRRFKSAAPTQRRRRFSSDAAA-----EEEEAAEKMDVLWENFNEELSRSRRSKSP 120
                 RF SA+  QRRRRF SDAA      EE EAAEKMDVLWENFNEELSRSRRS+  
Sbjct: 61  -----NRFPSAS-LQRRRRFLSDAAVNCEEEEEAEAAEKMDVLWENFNEELSRSRRSRLM 120

Query: 121 ESME----EIVKARR-MAELSLSESSGAVATARKT-GKTVIVKALKKLFLLHHNSRRKLQ 162
           ++ E    E VKARR MAE +LSE+SGA+AT RKT GKT  VK LKKLFL+H+NSRR LQ
Sbjct: 121 KTAETEENETVKARRRMAEFNLSETSGAMATRRKTMGKTAFVKVLKKLFLMHNNSRRNLQ 176

BLAST of MC11g1233 vs. ExPASy TrEMBL
Match: A0A6J1INL4 (uncharacterized protein LOC111477161 OS=Cucurbita maxima OX=3661 GN=LOC111477161 PE=4 SV=1)

HSP 1 Score: 172 bits (437), Expect = 5.81e-52
Identity = 113/182 (62.09%), Postives = 129/182 (70.88%), Query Frame = 0

Query: 1   MAVDDDFSFPTAADPFNRCGIDSPPLWRLSPATD--RNRRGTAAD--------GDGDLKI 60
           MAV+DDFSFPTA +P++RCGIDSPPLWRLSPA      R+ TA++         DG   +
Sbjct: 1   MAVEDDFSFPTALEPYSRCGIDSPPLWRLSPAASPISYRQRTASNRSFRDDQKSDGFASV 60

Query: 61  KINDRRFKSAAPTQRRRRFSSDAAA----EEEEAAEKMDVLWENFNEELSRSRRSKSPES 120
           +        +A  QRRRRFSSDAA     EEE AAEKMDVLWENFNEELSRS RS+  ++
Sbjct: 61  RF-------SASLQRRRRFSSDAAMDGEEEEEVAAEKMDVLWENFNEELSRSGRSRLMKT 120

Query: 121 ME----EIVKARR-MAELSLSESSGAVATARK-TGKTVIVKALKKLFLLHHNSRRKLQTP 162
            E    EIVK RR M EL+LSE+SGAVAT RK TGKT  VKALKKLFLLH+NSRR LQT 
Sbjct: 121 AEMEEIEIVKTRRRMTELNLSETSGAVATRRKATGKTAFVKALKKLFLLHNNSRRNLQTR 175

BLAST of MC11g1233 vs. TAIR 10
Match: AT1G71910.1 (unknown protein; Has 28 Blast hits to 28 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 6.9e-07
Identity = 57/173 (32.95%), Postives = 81/173 (46.82%), Query Frame = 0

Query: 5   DDFSFPTAA--DPFNRCGIDSPPLWRLSPATDRNRRG---------TAADGDGDLKIKIN 64
           ++F+FP+ A  D  +  G+DSPPLW+ SP T   R+             DGD D +    
Sbjct: 9   EEFTFPSLASHDSSHHSGLDSPPLWKHSPVTSFRRKDYDFGLARLVIGKDGDHDQR---- 68

Query: 65  DRRFKSAAPTQRRRRFSSDAAAEEEEAAEKMDVLWENFNEELSRSRRSKSPESMEEIVKA 124
               KS +  + R R+  D    +EE  EKMD+LWE+ NEEL    RS+S   +      
Sbjct: 69  ----KSFSYVEMRSRWIDD----KEE--EKMDMLWEDLNEEL--PPRSQSLRIVHGGDGG 128

Query: 125 RRMAELSLSESSGAVA---------TARKTGKTVIV--KALKKLFLLHHNSRR 156
            +   L   ESS             T +KT   V+V  + LKKL +L  +S+R
Sbjct: 129 EKKTALFPDESSAVAVGCGMKLSKKTKKKTNLNVLVLMRVLKKLIVLRSSSQR 165

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAA0061271.19.89e-5462.90uncharacterized protein E6C27_scaffold455G001140 [Cucumis melo var. makuwa] >TYK... [more]
XP_016902690.13.88e-5362.16PREDICTED: uncharacterized protein LOC103500054 isoform X2 [Cucumis melo][more]
XP_008461465.15.68e-5361.83PREDICTED: uncharacterized protein LOC103500054 isoform X1 [Cucumis melo][more]
XP_038899254.11.11e-5263.04uncharacterized protein LOC120086596 [Benincasa hispida][more]
XP_023536234.14.34e-5264.97uncharacterized protein LOC111797464 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
A0A5A7V6B24.79e-5462.90Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A1S4E3Y61.88e-5362.16uncharacterized protein LOC103500054 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3CEP42.75e-5361.83uncharacterized protein LOC103500054 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A0A0K6722.98e-5261.96Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G283910 PE=4 SV=1[more]
A0A6J1INL45.81e-5262.09uncharacterized protein LOC111477161 OS=Cucurbita maxima OX=3661 GN=LOC111477161... [more]
Match NameE-valueIdentityDescription
AT1G71910.16.9e-0732.95unknown protein; Has 28 Blast hits to 28 proteins in 10 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..60
NoneNo IPR availablePANTHERPTHR34666EXPRESSED PROTEINcoord: 4..159
NoneNo IPR availablePANTHERPTHR34666:SF7SUBFAMILY NOT NAMEDcoord: 4..159

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC11g1233.1MC11g1233.1mRNA