Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGTTGACGACGACTTCAGCTTCCCCACCGCCGCGGATCCCTTCAACCGCTGCGGCATCGATTCGCCGCCGCTCTGGCGCCTCTCTCCCGCCACCGACCGCAATCGCCGCGGCACGGCGGCGGACGGCGACGGTGATCTGAAGATCAAGATCAACGACCGCCGCTTCAAATCCGCGGCGCCGACGCAGAGGAGAAGGAGATTCTCGAGCGATGCGGCGGCGGAGGAGGAAGAGGCGGCGGAGAAGATGGACGTGCTGTGGGAGAATTTCAACGAGGAGTTGTCGAGGAGCCGGAGATCGAAATCGCCGGAATCGATGGAGGAGATCGTGAAGGCGCGGCGGATGGCGGAATTGAGCCTGTCGGAGAGTTCCGGCGCGGTGGCGACGGCGAGGAAGACGGGGAAGACGGTGATTGTGAAGGCTCTGAAGAAACTGTTCTTGCTTCATCACAATTCCCGCCGGAAGCTTCAAACTCCATCGCGG
mRNA sequence
ATGGCCGTTGACGACGACTTCAGCTTCCCCACCGCCGCGGATCCCTTCAACCGCTGCGGCATCGATTCGCCGCCGCTCTGGCGCCTCTCTCCCGCCACCGACCGCAATCGCCGCGGCACGGCGGCGGACGGCGACGGTGATCTGAAGATCAAGATCAACGACCGCCGCTTCAAATCCGCGGCGCCGACGCAGAGGAGAAGGAGATTCTCGAGCGATGCGGCGGCGGAGGAGGAAGAGGCGGCGGAGAAGATGGACGTGCTGTGGGAGAATTTCAACGAGGAGTTGTCGAGGAGCCGGAGATCGAAATCGCCGGAATCGATGGAGGAGATCGTGAAGGCGCGGCGGATGGCGGAATTGAGCCTGTCGGAGAGTTCCGGCGCGGTGGCGACGGCGAGGAAGACGGGGAAGACGGTGATTGTGAAGGCTCTGAAGAAACTGTTCTTGCTTCATCACAATTCCCGCCGGAAGCTTCAAACTCCATCGCGG
Coding sequence (CDS)
ATGGCCGTTGACGACGACTTCAGCTTCCCCACCGCCGCGGATCCCTTCAACCGCTGCGGCATCGATTCGCCGCCGCTCTGGCGCCTCTCTCCCGCCACCGACCGCAATCGCCGCGGCACGGCGGCGGACGGCGACGGTGATCTGAAGATCAAGATCAACGACCGCCGCTTCAAATCCGCGGCGCCGACGCAGAGGAGAAGGAGATTCTCGAGCGATGCGGCGGCGGAGGAGGAAGAGGCGGCGGAGAAGATGGACGTGCTGTGGGAGAATTTCAACGAGGAGTTGTCGAGGAGCCGGAGATCGAAATCGCCGGAATCGATGGAGGAGATCGTGAAGGCGCGGCGGATGGCGGAATTGAGCCTGTCGGAGAGTTCCGGCGCGGTGGCGACGGCGAGGAAGACGGGGAAGACGGTGATTGTGAAGGCTCTGAAGAAACTGTTCTTGCTTCATCACAATTCCCGCCGGAAGCTTCAAACTCCATCGCGG
Protein sequence
MAVDDDFSFPTAADPFNRCGIDSPPLWRLSPATDRNRRGTAADGDGDLKIKINDRRFKSAAPTQRRRRFSSDAAAEEEEAAEKMDVLWENFNEELSRSRRSKSPESMEEIVKARRMAELSLSESSGAVATARKTGKTVIVKALKKLFLLHHNSRRKLQTPSR
Homology
BLAST of MC11g1233 vs. NCBI nr
Match:
KAA0061271.1 (uncharacterized protein E6C27_scaffold455G001140 [Cucumis melo var. makuwa] >TYK09851.1 uncharacterized protein E5676_scaffold39G00190 [Cucumis melo var. makuwa])
HSP 1 Score: 178 bits (451), Expect = 9.89e-54
Identity = 117/186 (62.90%), Postives = 130/186 (69.89%), Query Frame = 0
Query: 1 MAVDDDFSFPTAADPFNRCGIDSPPLWRLSPAT-----------DRNRRGTAADGDGDLK 60
MAV+DDFSFPTA +PFNRCGIDSPPLWRLSP+ DRN R TA+DG+
Sbjct: 1 MAVEDDFSFPTALEPFNRCGIDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEIS-- 60
Query: 61 IKINDRRFKSAAPTQRRRRFSSDAAA-------EEEEAAEKMDVLWENFNEELSRSRRSK 120
RF SA+ QRRRRF SDAA EEE AEKMDVLWENFNEELSRSRRS+
Sbjct: 61 -----NRFPSAS-FQRRRRFLSDAAVNGEEEEEEEEAVAEKMDVLWENFNEELSRSRRSR 120
Query: 121 SPESME----EIVKAR-RMAELSLSESSGAVATARK-TGKTVIVKALKKLFLLHHNSRRK 162
++ E EIVKAR RMAEL+L E+SGA+AT RK TGKT VK LKKLFL+H NSRR
Sbjct: 121 LMKTAELEENEIVKARQRMAELNLPETSGAMATRRKATGKTAFVKVLKKLFLMHSNSRRN 178
BLAST of MC11g1233 vs. NCBI nr
Match:
XP_016902690.1 (PREDICTED: uncharacterized protein LOC103500054 isoform X2 [Cucumis melo])
HSP 1 Score: 176 bits (447), Expect = 3.88e-53
Identity = 115/185 (62.16%), Postives = 130/185 (70.27%), Query Frame = 0
Query: 1 MAVDDDFSFPTAADPFNRCGIDSPPLWRLSPAT-----------DRNRRGTAADGDGDLK 60
MAV+DDFSFPTA +PFNRCG+DSPPLWRLSP+ DRN R TA+DG+
Sbjct: 1 MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEIS-- 60
Query: 61 IKINDRRFKSAAPTQRRRRFSSDAAA------EEEEAAEKMDVLWENFNEELSRSRRSKS 120
RF SA+ QRRRRF SDAA EEE AEKMDVLWENFNEELSRSRRS+
Sbjct: 61 -----NRFPSAS-FQRRRRFLSDAAVNGEEEEEEEAVAEKMDVLWENFNEELSRSRRSRL 120
Query: 121 PESME----EIVKAR-RMAELSLSESSGAVATARK-TGKTVIVKALKKLFLLHHNSRRKL 162
++ E EIVKAR RMAEL+L E+SGA+AT RK TGKT VK LKKLFL+H +SRR L
Sbjct: 121 MKTAELEENEIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRNL 177
BLAST of MC11g1233 vs. NCBI nr
Match:
XP_008461465.1 (PREDICTED: uncharacterized protein LOC103500054 isoform X1 [Cucumis melo])
HSP 1 Score: 176 bits (446), Expect = 5.68e-53
Identity = 115/186 (61.83%), Postives = 130/186 (69.89%), Query Frame = 0
Query: 1 MAVDDDFSFPTAADPFNRCGIDSPPLWRLSPAT-----------DRNRRGTAADGDGDLK 60
MAV+DDFSFPTA +PFNRCG+DSPPLWRLSP+ DRN R TA+DG+
Sbjct: 1 MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEIS-- 60
Query: 61 IKINDRRFKSAAPTQRRRRFSSDAAA-------EEEEAAEKMDVLWENFNEELSRSRRSK 120
RF SA+ QRRRRF SDAA EEE AEKMDVLWENFNEELSRSRRS+
Sbjct: 61 -----NRFPSAS-FQRRRRFLSDAAVNGEEEEEEEEAVAEKMDVLWENFNEELSRSRRSR 120
Query: 121 SPESME----EIVKAR-RMAELSLSESSGAVATARK-TGKTVIVKALKKLFLLHHNSRRK 162
++ E EIVKAR RMAEL+L E+SGA+AT RK TGKT VK LKKLFL+H +SRR
Sbjct: 121 LMKTAELEENEIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRN 178
BLAST of MC11g1233 vs. NCBI nr
Match:
XP_038899254.1 (uncharacterized protein LOC120086596 [Benincasa hispida])
HSP 1 Score: 175 bits (444), Expect = 1.11e-52
Identity = 116/184 (63.04%), Postives = 127/184 (69.02%), Query Frame = 0
Query: 1 MAVDDDFSFPTAADPFNRCGIDSPPLWRLSPAT-----------DRNRRGTAADGDGDLK 60
MAV+DDFSFPTA +P +RCGIDSPPLWRLSPAT D N R TAADG
Sbjct: 1 MAVEDDFSFPTALEPLSRCGIDSPPLWRLSPATSPISYRQQTSCDWNFRDTAADGG---- 60
Query: 61 IKINDRRFKSAAPTQ--RRRRFSSDAAAEEEEAA---EKMDVLWENFNEELSRSRRSKSP 120
N RF S T +RRRFSSDA EEE AA EKMDVLWENFNEELSRSRRS+
Sbjct: 61 ---NSDRFPSGRFTASLQRRRFSSDAEEEEETAAAAAEKMDVLWENFNEELSRSRRSRLM 120
Query: 121 ESME----EIVKARR-MAELSLSESSGAVATARK-TGKTVIVKALKKLFLLHHNSRRKLQ 162
++ E EIVK RR M EL+LSE+SG V T RK TGKT VK LKKLFL+H+NSRR LQ
Sbjct: 121 KTAEMEEIEIVKTRRRMTELNLSETSGTVTTTRKATGKTAFVKVLKKLFLIHNNSRRNLQ 177
BLAST of MC11g1233 vs. NCBI nr
Match:
XP_023536234.1 (uncharacterized protein LOC111797464 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 174 bits (440), Expect = 4.34e-52
Identity = 115/177 (64.97%), Postives = 128/177 (72.32%), Query Frame = 0
Query: 1 MAVDDDFSFPTAADPFNRCGIDSPPLWRLSPATD--RNRRGTAADG---DGDLKIKINDR 60
MAV+DDFSFPTA +PFNRCGIDSPPLWRLSP R+ TA++ D +
Sbjct: 1 MAVEDDFSFPTALEPFNRCGIDSPPLWRLSPTASPISYRQKTASNRSFRDDQKSDRFASV 60
Query: 61 RFKSAAPTQRRRRFSSDAAA-----EEEEAAEKMDVLWENFNEELSRSRRSKSPESME-- 120
RF +A QRRRRFSSDAA EEE AAEKMDVLWENFNEELSRS RS+ ++ E
Sbjct: 61 RF--SASLQRRRRFSSDAAMDGEEEEEEVAAEKMDVLWENFNEELSRSGRSRLMKTAEME 120
Query: 121 --EIVKARR-MAELSLSESSGAVATARK-TGKTVIVKALKKLFLLHHNSRRKLQTPS 161
EIVKARR MAEL+LSE+SGAV T RK TGKT VKALKKLFLLH+NSRR LQT S
Sbjct: 121 EIEIVKARRRMAELNLSETSGAVVTRRKATGKTAFVKALKKLFLLHNNSRRNLQTRS 175
BLAST of MC11g1233 vs. ExPASy TrEMBL
Match:
A0A5A7V6B2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00190 PE=4 SV=1)
HSP 1 Score: 178 bits (451), Expect = 4.79e-54
Identity = 117/186 (62.90%), Postives = 130/186 (69.89%), Query Frame = 0
Query: 1 MAVDDDFSFPTAADPFNRCGIDSPPLWRLSPAT-----------DRNRRGTAADGDGDLK 60
MAV+DDFSFPTA +PFNRCGIDSPPLWRLSP+ DRN R TA+DG+
Sbjct: 1 MAVEDDFSFPTALEPFNRCGIDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEIS-- 60
Query: 61 IKINDRRFKSAAPTQRRRRFSSDAAA-------EEEEAAEKMDVLWENFNEELSRSRRSK 120
RF SA+ QRRRRF SDAA EEE AEKMDVLWENFNEELSRSRRS+
Sbjct: 61 -----NRFPSAS-FQRRRRFLSDAAVNGEEEEEEEEAVAEKMDVLWENFNEELSRSRRSR 120
Query: 121 SPESME----EIVKAR-RMAELSLSESSGAVATARK-TGKTVIVKALKKLFLLHHNSRRK 162
++ E EIVKAR RMAEL+L E+SGA+AT RK TGKT VK LKKLFL+H NSRR
Sbjct: 121 LMKTAELEENEIVKARQRMAELNLPETSGAMATRRKATGKTAFVKVLKKLFLMHSNSRRN 178
BLAST of MC11g1233 vs. ExPASy TrEMBL
Match:
A0A1S4E3Y6 (uncharacterized protein LOC103500054 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500054 PE=4 SV=1)
HSP 1 Score: 176 bits (447), Expect = 1.88e-53
Identity = 115/185 (62.16%), Postives = 130/185 (70.27%), Query Frame = 0
Query: 1 MAVDDDFSFPTAADPFNRCGIDSPPLWRLSPAT-----------DRNRRGTAADGDGDLK 60
MAV+DDFSFPTA +PFNRCG+DSPPLWRLSP+ DRN R TA+DG+
Sbjct: 1 MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEIS-- 60
Query: 61 IKINDRRFKSAAPTQRRRRFSSDAAA------EEEEAAEKMDVLWENFNEELSRSRRSKS 120
RF SA+ QRRRRF SDAA EEE AEKMDVLWENFNEELSRSRRS+
Sbjct: 61 -----NRFPSAS-FQRRRRFLSDAAVNGEEEEEEEAVAEKMDVLWENFNEELSRSRRSRL 120
Query: 121 PESME----EIVKAR-RMAELSLSESSGAVATARK-TGKTVIVKALKKLFLLHHNSRRKL 162
++ E EIVKAR RMAEL+L E+SGA+AT RK TGKT VK LKKLFL+H +SRR L
Sbjct: 121 MKTAELEENEIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRNL 177
BLAST of MC11g1233 vs. ExPASy TrEMBL
Match:
A0A1S3CEP4 (uncharacterized protein LOC103500054 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500054 PE=4 SV=1)
HSP 1 Score: 176 bits (446), Expect = 2.75e-53
Identity = 115/186 (61.83%), Postives = 130/186 (69.89%), Query Frame = 0
Query: 1 MAVDDDFSFPTAADPFNRCGIDSPPLWRLSPAT-----------DRNRRGTAADGDGDLK 60
MAV+DDFSFPTA +PFNRCG+DSPPLWRLSP+ DRN R TA+DG+
Sbjct: 1 MAVEDDFSFPTALEPFNRCGVDSPPLWRLSPSASPISYRQQISCDRNFRDTASDGEIS-- 60
Query: 61 IKINDRRFKSAAPTQRRRRFSSDAAA-------EEEEAAEKMDVLWENFNEELSRSRRSK 120
RF SA+ QRRRRF SDAA EEE AEKMDVLWENFNEELSRSRRS+
Sbjct: 61 -----NRFPSAS-FQRRRRFLSDAAVNGEEEEEEEEAVAEKMDVLWENFNEELSRSRRSR 120
Query: 121 SPESME----EIVKAR-RMAELSLSESSGAVATARK-TGKTVIVKALKKLFLLHHNSRRK 162
++ E EIVKAR RMAEL+L E+SGA+AT RK TGKT VK LKKLFL+H +SRR
Sbjct: 121 LMKTAELEENEIVKARQRMAELNLPETSGAMATGRKATGKTAFVKVLKKLFLMHSSSRRN 178
BLAST of MC11g1233 vs. ExPASy TrEMBL
Match:
A0A0A0K672 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G283910 PE=4 SV=1)
HSP 1 Score: 173 bits (439), Expect = 2.98e-52
Identity = 114/184 (61.96%), Postives = 129/184 (70.11%), Query Frame = 0
Query: 1 MAVDDDFSFPTAADPFNRCGIDSPPLWRLSPAT-----------DRNRRGTAADGDGDLK 60
MAV++DFSFPTA +PFNRCGIDSPPLW LSP+ D N R TA+DG+
Sbjct: 1 MAVEEDFSFPTALEPFNRCGIDSPPLWHLSPSASPISYPQQTSCDWNFRDTASDGEIS-- 60
Query: 61 IKINDRRFKSAAPTQRRRRFSSDAAA-----EEEEAAEKMDVLWENFNEELSRSRRSKSP 120
RF SA+ QRRRRF SDAA EE EAAEKMDVLWENFNEELSRSRRS+
Sbjct: 61 -----NRFPSAS-LQRRRRFLSDAAVNCEEEEEAEAAEKMDVLWENFNEELSRSRRSRLM 120
Query: 121 ESME----EIVKARR-MAELSLSESSGAVATARKT-GKTVIVKALKKLFLLHHNSRRKLQ 162
++ E E VKARR MAE +LSE+SGA+AT RKT GKT VK LKKLFL+H+NSRR LQ
Sbjct: 121 KTAETEENETVKARRRMAEFNLSETSGAMATRRKTMGKTAFVKVLKKLFLMHNNSRRNLQ 176
BLAST of MC11g1233 vs. ExPASy TrEMBL
Match:
A0A6J1INL4 (uncharacterized protein LOC111477161 OS=Cucurbita maxima OX=3661 GN=LOC111477161 PE=4 SV=1)
HSP 1 Score: 172 bits (437), Expect = 5.81e-52
Identity = 113/182 (62.09%), Postives = 129/182 (70.88%), Query Frame = 0
Query: 1 MAVDDDFSFPTAADPFNRCGIDSPPLWRLSPATD--RNRRGTAAD--------GDGDLKI 60
MAV+DDFSFPTA +P++RCGIDSPPLWRLSPA R+ TA++ DG +
Sbjct: 1 MAVEDDFSFPTALEPYSRCGIDSPPLWRLSPAASPISYRQRTASNRSFRDDQKSDGFASV 60
Query: 61 KINDRRFKSAAPTQRRRRFSSDAAA----EEEEAAEKMDVLWENFNEELSRSRRSKSPES 120
+ +A QRRRRFSSDAA EEE AAEKMDVLWENFNEELSRS RS+ ++
Sbjct: 61 RF-------SASLQRRRRFSSDAAMDGEEEEEVAAEKMDVLWENFNEELSRSGRSRLMKT 120
Query: 121 ME----EIVKARR-MAELSLSESSGAVATARK-TGKTVIVKALKKLFLLHHNSRRKLQTP 162
E EIVK RR M EL+LSE+SGAVAT RK TGKT VKALKKLFLLH+NSRR LQT
Sbjct: 121 AEMEEIEIVKTRRRMTELNLSETSGAVATRRKATGKTAFVKALKKLFLLHNNSRRNLQTR 175
BLAST of MC11g1233 vs. TAIR 10
Match:
AT1G71910.1 (unknown protein; Has 28 Blast hits to 28 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 51.6 bits (122), Expect = 6.9e-07
Identity = 57/173 (32.95%), Postives = 81/173 (46.82%), Query Frame = 0
Query: 5 DDFSFPTAA--DPFNRCGIDSPPLWRLSPATDRNRRG---------TAADGDGDLKIKIN 64
++F+FP+ A D + G+DSPPLW+ SP T R+ DGD D +
Sbjct: 9 EEFTFPSLASHDSSHHSGLDSPPLWKHSPVTSFRRKDYDFGLARLVIGKDGDHDQR---- 68
Query: 65 DRRFKSAAPTQRRRRFSSDAAAEEEEAAEKMDVLWENFNEELSRSRRSKSPESMEEIVKA 124
KS + + R R+ D +EE EKMD+LWE+ NEEL RS+S +
Sbjct: 69 ----KSFSYVEMRSRWIDD----KEE--EKMDMLWEDLNEEL--PPRSQSLRIVHGGDGG 128
Query: 125 RRMAELSLSESSGAVA---------TARKTGKTVIV--KALKKLFLLHHNSRR 156
+ L ESS T +KT V+V + LKKL +L +S+R
Sbjct: 129 EKKTALFPDESSAVAVGCGMKLSKKTKKKTNLNVLVLMRVLKKLIVLRSSSQR 165
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAA0061271.1 | 9.89e-54 | 62.90 | uncharacterized protein E6C27_scaffold455G001140 [Cucumis melo var. makuwa] >TYK... | [more] |
XP_016902690.1 | 3.88e-53 | 62.16 | PREDICTED: uncharacterized protein LOC103500054 isoform X2 [Cucumis melo] | [more] |
XP_008461465.1 | 5.68e-53 | 61.83 | PREDICTED: uncharacterized protein LOC103500054 isoform X1 [Cucumis melo] | [more] |
XP_038899254.1 | 1.11e-52 | 63.04 | uncharacterized protein LOC120086596 [Benincasa hispida] | [more] |
XP_023536234.1 | 4.34e-52 | 64.97 | uncharacterized protein LOC111797464 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7V6B2 | 4.79e-54 | 62.90 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A1S4E3Y6 | 1.88e-53 | 62.16 | uncharacterized protein LOC103500054 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A1S3CEP4 | 2.75e-53 | 61.83 | uncharacterized protein LOC103500054 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A0A0K672 | 2.98e-52 | 61.96 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G283910 PE=4 SV=1 | [more] |
A0A6J1INL4 | 5.81e-52 | 62.09 | uncharacterized protein LOC111477161 OS=Cucurbita maxima OX=3661 GN=LOC111477161... | [more] |
Match Name | E-value | Identity | Description | |
AT1G71910.1 | 6.9e-07 | 32.95 | unknown protein; Has 28 Blast hits to 28 proteins in 10 species: Archae - 0; Bac... | [more] |