MC11g1188 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g1188
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Unknown protein
Location	MC11: 11172554 .. 11172865 (-)
RNA-Seq Expression	MC11g1188
Synteny	MC11g1188

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTACCTTAAAGGCGTATCATGCTTCTCAAGGAGACGAAAAAACAGAAGAAGAAATTATGGAGACGGTCCTTGGGAGAAGATCAAACTATATAATACGAATGGGATATGGACCGAAACCCACCAGAAACAAAGGATCATCATCAAAATACTTTGATGAATATGTGGAGTCATTAGAGGCTCGTCTTCAGAAGCATGAGGAAAAATTGGCAACTCAACGAAAAGCGAACGAAGACCAACAAATTGCCACCCAAGAACAAATACAAAAAGCATTGGAGGCTCAAAGCCAGGAGTTTAACAGGAAACTTCTC

mRNA sequence

ATGATTACCTTAAAGGCGTATCATGCTTCTCAAGGAGACGAAAAAACAGAAGAAGAAATTATGGAGACGGTCCTTGGGAGAAGATCAAACTATATAATACGAATGGGATATGGACCGAAACCCACCAGAAACAAAGGATCATCATCAAAATACTTTGATGAATATGTGGAGTCATTAGAGGCTCGTCTTCAGAAGCATGAGGAAAAATTGGCAACTCAACGAAAAGCGAACGAAGACCAACAAATTGCCACCCAAGAACAAATACAAAAAGCATTGGAGGCTCAAAGCCAGGAGTTTAACAGGAAACTTCTC

Coding sequence (CDS)

ATGATTACCTTAAAGGCGTATCATGCTTCTCAAGGAGACGAAAAAACAGAAGAAGAAATTATGGAGACGGTCCTTGGGAGAAGATCAAACTATATAATACGAATGGGATATGGACCGAAACCCACCAGAAACAAAGGATCATCATCAAAATACTTTGATGAATATGTGGAGTCATTAGAGGCTCGTCTTCAGAAGCATGAGGAAAAATTGGCAACTCAACGAAAAGCGAACGAAGACCAACAAATTGCCACCCAAGAACAAATACAAAAAGCATTGGAGGCTCAAAGCCAGGAGTTTAACAGGAAACTTCTC

Protein sequence

MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIRMGYGPKPTRNKGSSSKYFDEYVESLEARLQKHEEKLATQRKANEDQQIATQEQIQKALEAQSQEFNRKLL

Homology

[Close]

BLAST of MC11g1188 vs. NCBI nr
Match: XP_022143616.1 (uncharacterized protein LOC111013476 [Momordica charantia])

HSP 1 Score: 160 bits (404), Expect = 4.65e-47
Identity = 86/104 (82.69%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIRMGYGPKPTRNKGSSSKYFDEYVESLE 60
           MITLKAYHASQGDEKTEEEIMETVLG+RSNY+I MGYGPKPTRNKGSSSKY DEYVESLE
Sbjct: 107 MITLKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLE 166

Query: 61  ARLQKHEEKLATQRKANEDQQIATQEQIQKALEAQSQEFNRKLL 104
           ARLQKHEE++A            TQEQIQKALEAQSQEFNRKLL
Sbjct: 167 ARLQKHEEEMAR----------TTQEQIQKALEAQSQEFNRKLL 200

[Close]

BLAST of MC11g1188 vs. NCBI nr
Match: XP_022148911.1 (uncharacterized protein LOC111017461 [Momordica charantia])

HSP 1 Score: 160 bits (404), Expect = 1.41e-46
Identity = 86/104 (82.69%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIRMGYGPKPTRNKGSSSKYFDEYVESLE 60
           MITLKAYHASQGDEKTEEEIMETVLG+RSNY+I MGYGPKPTRNKGSSSKY DEYVESLE
Sbjct: 112 MITLKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLE 171

Query: 61  ARLQKHEEKLATQRKANEDQQIATQEQIQKALEAQSQEFNRKLL 104
           ARLQKHEE++A            TQEQIQKALEAQSQEFNRKLL
Sbjct: 172 ARLQKHEEEMAR----------TTQEQIQKALEAQSQEFNRKLL 205

[Close]

BLAST of MC11g1188 vs. NCBI nr
Match: XP_022153681.1 (uncharacterized protein LOC111021138 [Momordica charantia])

HSP 1 Score: 81.6 bits (200), Expect = 5.44e-17
Identity = 39/41 (95.12%), Postives = 39/41 (95.12%), Query Frame = 0


Query: 1   MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIRMGYGPKP 41
           MITLKA HASQGDEKTEEEIMETVLGRRSNYII MGYGPKP
Sbjct: 107 MITLKANHASQGDEKTEEEIMETVLGRRSNYIIGMGYGPKP 147

[Close]

BLAST of MC11g1188 vs. NCBI nr
Match: KAG5572499.1 (hypothetical protein H5410_062265 [Solanum commersonii])

HSP 1 Score: 50.1 bits (118), Expect = 4.46e-05
Identity = 27/72 (37.50%), Postives = 42/72 (58.33%), Query Frame = 0


Query: 1  MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIRMGYGPKPTRNKGSSSKYFDEYVESLE 60
          MI LKA + S     T +EI++ +LG++S YI  +GYGPKP  N+ +  +        LE
Sbjct: 1  MIDLKALYTSGESSMTIDEIVDAILGKKSGYIKGLGYGPKPNTNRATQRR-----TAELE 60

Query: 61 ARLQKHEEKLAT 72
            L+K +E+ A+
Sbjct: 61 DSLRKTKEEAAS 67

[Close]

BLAST of MC11g1188 vs. NCBI nr
Match: KAG5576495.1 (hypothetical protein H5410_056629 [Solanum commersonii])

HSP 1 Score: 51.6 bits (122), Expect = 4.89e-05
Identity = 27/65 (41.54%), Postives = 40/65 (61.54%), Query Frame = 0


Query: 1   MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIRMGYGPKPTRNKGSSSKYFDEYVESLE 60
           MI LKA + S     T +EI++ +LG++S YI  +GYGPKP  N+ +  +   E  +SLE
Sbjct: 152 MIDLKALYTSGESSMTIDEIVDAILGKKSGYIKGLGYGPKPNTNRATQRRT-TELEDSLE 211

Query: 61  ARLQK 65
            R +K
Sbjct: 212 RRRRK 215

[Close]

BLAST of MC11g1188 vs. ExPASy TrEMBL
Match: A0A6J1CQT5 (uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013476 PE=4 SV=1)

HSP 1 Score: 160 bits (404), Expect = 2.25e-47
Identity = 86/104 (82.69%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIRMGYGPKPTRNKGSSSKYFDEYVESLE 60
           MITLKAYHASQGDEKTEEEIMETVLG+RSNY+I MGYGPKPTRNKGSSSKY DEYVESLE
Sbjct: 107 MITLKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLE 166

Query: 61  ARLQKHEEKLATQRKANEDQQIATQEQIQKALEAQSQEFNRKLL 104
           ARLQKHEE++A            TQEQIQKALEAQSQEFNRKLL
Sbjct: 167 ARLQKHEEEMAR----------TTQEQIQKALEAQSQEFNRKLL 200

[Close]

BLAST of MC11g1188 vs. ExPASy TrEMBL
Match: A0A6J1D6S9 (uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017461 PE=4 SV=1)

HSP 1 Score: 160 bits (404), Expect = 6.84e-47
Identity = 86/104 (82.69%), Postives = 90/104 (86.54%), Query Frame = 0


Query: 1   MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIRMGYGPKPTRNKGSSSKYFDEYVESLE 60
           MITLKAYHASQGDEKTEEEIMETVLG+RSNY+I MGYGPKPTRNKGSSSKY DEYVESLE
Sbjct: 112 MITLKAYHASQGDEKTEEEIMETVLGKRSNYVIGMGYGPKPTRNKGSSSKYSDEYVESLE 171

Query: 61  ARLQKHEEKLATQRKANEDQQIATQEQIQKALEAQSQEFNRKLL 104
           ARLQKHEE++A            TQEQIQKALEAQSQEFNRKLL
Sbjct: 172 ARLQKHEEEMAR----------TTQEQIQKALEAQSQEFNRKLL 205

[Close]

BLAST of MC11g1188 vs. ExPASy TrEMBL
Match: A0A6J1DLF1 (uncharacterized protein LOC111021138 OS=Momordica charantia OX=3673 GN=LOC111021138 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 2.63e-17
Identity = 39/41 (95.12%), Postives = 39/41 (95.12%), Query Frame = 0


Query: 1   MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIRMGYGPKP 41
           MITLKA HASQGDEKTEEEIMETVLGRRSNYII MGYGPKP
Sbjct: 107 MITLKANHASQGDEKTEEEIMETVLGRRSNYIIGMGYGPKP 147

[Close]

BLAST of MC11g1188 vs. ExPASy TrEMBL
Match: M1DNT9 (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.00e-05
Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 1   MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIRMGYGPKPTRNKGSSSKYFDEYVESLE 60
           MI LKA + S     T +EI++ +LG++S YI  +GYGPKP  N+ +  +     +  LE
Sbjct: 122 MIDLKALYTSGESSMTIDEIVDAILGKKSGYIKGLGYGPKPNTNRATQRR-----IAELE 181

Query: 61  ARLQKHEEKLAT 72
             LQK +E+ A+
Sbjct: 182 DSLQKMKEEAAS 188

[Close]

BLAST of MC11g1188 vs. ExPASy TrEMBL
Match: A0A2G2X5C7 (Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_07150 PE=4 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.66e-04
Identity = 26/65 (40.00%), Postives = 38/65 (58.46%), Query Frame = 0


Query: 1  MITLKAYHASQGDEKTEEEIMETVLGRRSNYIIRMGYGPKPTRNKGSSSKYFDEYVESLE 60
          MI LKA + S     T +EI++ VLG +S YI  +GYGPKP   + ++ +   E  +SL+
Sbjct: 17 MIDLKALYTSGESSMTIDEIVDVVLGTKSGYIKGLGYGPKPNTTR-ATQRIMVELEDSLK 76

Query: 61 ARLQK 65
             QK
Sbjct: 77 KAKQK 80

The following BLAST results are available for this feature:

BLAST of MC11g1188 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g1188 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143616.1	4.65e-47	82.69	uncharacterized protein LOC111013476 [Momordica charantia]	[more]
XP_022148911.1	1.41e-46	82.69	uncharacterized protein LOC111017461 [Momordica charantia]	[more]
XP_022153681.1	5.44e-17	95.12	uncharacterized protein LOC111021138 [Momordica charantia]	[more]
KAG5572499.1	4.46e-05	37.50	hypothetical protein H5410_062265 [Solanum commersonii]	[more]
KAG5576495.1	4.89e-05	41.54	hypothetical protein H5410_056629 [Solanum commersonii]	[more]

BLAST of MC11g1188 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQT5	2.25e-47	82.69	uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1D6S9	6.84e-47	82.69	uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1DLF1	2.63e-17	95.12	uncharacterized protein LOC111021138 OS=Momordica charantia OX=3673 GN=LOC111021...	[more]
M1DNT9	1.00e-05	38.89	Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1	[more]
A0A2G2X5C7	2.66e-04	40.00	Uncharacterized protein OS=Capsicum baccatum OX=33114 GN=CQW23_07150 PE=4 SV=1	[more]

BLAST of MC11g1188 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 56..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g1188.1	MC11g1188.1	mRNA