MC11g1149 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g1149
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	transcription factor MYB52-like
Location	MC11: 9957602 .. 9959310 (-)
RNA-Seq Expression	MC11g1149
Synteny	MC11g1149

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGGGTCATTGGCGGCCGGCCGAGGACGAGAAACTCCAACGACTCGTTCAACAGTTTGGTGCCCGAAACTGGAACTCCATCGCTGAGAAGCTCCAAGGAAGATCAGGCATGCTTATCATTTCTCATTTCATGTTTCTAATTTTTTCGGTTAAATAAAAAGAAAGAGAATTCCTTCTACGTATCGATTTGGATCTAATCTATTAGTTTTTTCCTTTTTTTACCTATTCCCTTTCTTTTTTTTTCTCTCTCTATTTCATAGGAGTTGTGCATATTTTTATATCTAGAATTTATATATACAACATATATTAATGTGAGGAGTGAGTTGGGTAATTGTTTCAAAAACAAAATCTTCAAATTTATTAGTTTATACTTATTTATTTTTCGAGATTTATCATGTATTAAATTAGTTAGAAAGCATGAAATAATAATTTTTTCGATTTCTAATTTGTATAATTGACTGTTTCTAAAATTTGTATATAATTTTGAGAACGAAAAGAATGAAGACATAAATAATTATCACAAGAAACGTTTTCAAATAATCAGAAAGTTGCTTGGGGATAGAGAACTAGCAAGAATATGAAACCTTGCATAATATTTTGTGTTCTAGTCTTGTAGTTGTTTAGTTCTCTGATGAATTACAGTTATAGGATCCACTGACGTAAGCCACACGAGATCGATTTTGAATGATAAGAAATCTGAGATGTTTTCTATTAATATTCATAGCTTCCATTTGAGTAGCTCATATTTATTATAAATCGTTAATCCCTTATTTCTAATGCTACTCTAATGCGGGATCCTTAACATACATCGATTGTGATTCTTTTAGCTCATTAATCTTAGCTGCATCTCATTTTCATACAGAAGGTTCGTTTGAACATTTTGGATAGGTTAATATTCATAGTAATTTATATTTATTAATTATAAACCGTTATTAGATTCCTTATCTTTTAAATGCATAACCTTAACGGTTTGGTTTCGTGTTTCGTGTTTTAATTTGCAGGGAAGAGTTGCAGATTGAGATGGTTCAATCAACTAGATCCAAGAATAAACCGAAGGCCGTTCAGTGAAGAAGAAGAAGAGAGATTAATGGCGGCGCATCGGATCCACGGCAACAAATGGGCCTTAATCGCCAGGCTTTTGCCCGGAAGAACCGATAACGCCGTCAAAAATCACTGGCACGTAATAATCGCCAGAAAGCACAGGCAACACTTCAAAATACACGGCGGCGGACGGTTTCCGTACGGACCAACAACTGCGGGCGTTTTCTTCAGACAGAAATCGGCGATCATTTTGAACGCGGACATCAAACGAGACGAGGAATCGGCTGACCCGAAGGATATTGTTCCGTTCATAGATTTTCTTGGCGTTGGGATCTCTTCTTCAACACCCAACAAATAATTTTTTATTTTGTTATATATATAATATTATATATATATGGTAGAGATTAGGGTTTTTTTTTTAATCTTATTTGATTGTTTGGATAGTAAGTTAATTGAACTTAGATAACTCTGGTAGGATGTTGAATTTATCCAACTCAATCTTAACGATTAAGTATTTGAGTTGGATTAGGTTACTTGAAATGGTGTAGTTTGTAGAAAATTTATGACGAGAAAGAGTAAAGAGATCGGAAAATCAGAGTTGTATTCTTTTAAATGTTTTCAGTTTTTTTAGATATATATTTGGTAGCAGATTTGTTAATTGGATATCAA

mRNA sequence

CGGGGTCATTGGCGGCCGGCCGAGGACGAGAAACTCCAACGACTCGTTCAACAGTTTGGTGCCCGAAACTGGAACTCCATCGCTGAGAAGCTCCAAGGAAGATCAGGCAGGAAGAGTTGCAGATTGAGATGGTTCAATCAACTAGATCCAAGAATAAACCGAAGGCCGTTCAGTGAAGAAGAAGAAGAGAGATTAATGGCGGCGCATCGGATCCACGGCAACAAATGGGCCTTAATCGCCAGGCTTTTGCCCGGAAGAACCGATAACGCCGTCAAAAATCACTGGCACGTAATAATCGCCAGAAAGCACAGGCAACACTTCAAAATACACGGCGGCGGACGGTTTCCGTACGGACCAACAACTGCGGGCGTTTTCTTCAGACAGAAATCGGCGATCATTTTGAACGCGGACATCAAACGAGACGAGGAATCGGCTGACCCGAAGGATATTGTTCCGTTCATAGATTTTCTTGGCGTTGGGATCTCTTCTTCAACACCCAACAAATAATTTTTTATTTTGTTATATATATAATATTATATATATATGGTAGAGATTAGGGTTTTTTTTTTAATCTTATTTGATTGTTTGGATAGTAAGTTAATTGAACTTAGATAACTCTGGTAGGATGTTGAATTTATCCAACTCAATCTTAACGATTAAGTATTTGAGTTGGATTAGGTTACTTGAAATGGTGTAGTTTGTAGAAAATTTATGACGAGAAAGAGTAAAGAGATCGGAAAATCAGAGTTGTATTCTTTTAAATGTTTTCAGTTTTTTTAGATATATATTTGGTAGCAGATTTGTTAATTGGATATCAA

Coding sequence (CDS)

CGGGGTCATTGGCGGCCGGCCGAGGACGAGAAACTCCAACGACTCGTTCAACAGTTTGGTGCCCGAAACTGGAACTCCATCGCTGAGAAGCTCCAAGGAAGATCAGGCAGGAAGAGTTGCAGATTGAGATGGTTCAATCAACTAGATCCAAGAATAAACCGAAGGCCGTTCAGTGAAGAAGAAGAAGAGAGATTAATGGCGGCGCATCGGATCCACGGCAACAAATGGGCCTTAATCGCCAGGCTTTTGCCCGGAAGAACCGATAACGCCGTCAAAAATCACTGGCACGTAATAATCGCCAGAAAGCACAGGCAACACTTCAAAATACACGGCGGCGGACGGTTTCCGTACGGACCAACAACTGCGGGCGTTTTCTTCAGACAGAAATCGGCGATCATTTTGAACGCGGACATCAAACGAGACGAGGAATCGGCTGACCCGAAGGATATTGTTCCGTTCATAGATTTTCTTGGCGTTGGGATCTCTTCTTCAACACCCAACAAATAA

Protein sequence

RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGRKSCRLRWFNQLDPRINRRPFSEEEEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIHGGGRFPYGPTTAGVFFRQKSAIILNADIKRDEESADPKDIVPFIDFLGVGISSSTPNK

Homology

[Close]

BLAST of MC11g1149 vs. ExPASy Swiss-Prot
Match: Q9FX36 (Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.8e-47
Identity = 96/158 (60.76%), Postives = 115/158 (72.78%), Query Frame = 0


Query: 1   RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGRKSCRLRWFNQLDPRINRRPFSEE 60
           RGHWRPAEDEKL+ LV+Q+G  NWN+IA KL GRSG KSCRLRWFNQLDPRINR PF+EE
Sbjct: 6   RGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSG-KSCRLRWFNQLDPRINRNPFTEE 65

Query: 61  EEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIHGGGRFPYGPT 120
           EEERL+AAHRIHGN+W++IARL PGRTDNAVKNHWHVI+AR+ RQ  K     R     T
Sbjct: 66  EEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQTSK----PRLLPSTT 125

Query: 121 TAGVFFRQKSAIILNADIKRDEESADPKDIVP--FIDF 157
           ++      +  ++ +     +  S D K I P  FI+F
Sbjct: 126 SSSSLMASEQIMMSSGGYNHNYSSDDRKKIFPADFINF 158

[Close]

BLAST of MC11g1149 vs. ExPASy Swiss-Prot
Match: Q6R0C4 (Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 5.2e-47
Identity = 85/113 (75.22%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGRKSCRLRWFNQLDPRINRRPFSEE 60
           RGHWRPAEDEKL+ LV+QFG  NWN+IA+KL GRSG KSCRLRWFNQLDPRINR PF+EE
Sbjct: 5   RGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSG-KSCRLRWFNQLDPRINRNPFTEE 64

Query: 61  EEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIHGGG 114
           EEERL+A+HRIHGN+W++IAR  PGRTDNAVKNHWHVI+AR+ R+  K+   G
Sbjct: 65  EEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSKLRPRG 116

[Close]

BLAST of MC11g1149 vs. ExPASy Swiss-Prot
Match: Q5NBM8 (Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV=2)

HSP 1 Score: 186.4 bits (472), Expect = 2.6e-46
Identity = 86/105 (81.90%), Postives = 95/105 (90.48%), Query Frame = 0


Query: 1   RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGRKSCRLRWFNQLDPRINRRPFSEE 60
           RGHWRPAED KL+ LV Q+G +NWN IAEKL GRSG KSCRLRWFNQLDPRINRR F+EE
Sbjct: 49  RGHWRPAEDAKLKDLVAQYGPQNWNLIAEKLDGRSG-KSCRLRWFNQLDPRINRRAFTEE 108

Query: 61  EEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQ 106
           EEERLMAAHR +GNKWALIARL PGRTDNAVKNHWHV++AR+HR+
Sbjct: 109 EEERLMAAHRAYGNKWALIARLFPGRTDNAVKNHWHVLMARRHRE 152

[Close]

BLAST of MC11g1149 vs. ExPASy Swiss-Prot
Match: Q9LQX5 (Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 5.8e-46
Identity = 84/106 (79.25%), Postives = 96/106 (90.57%), Query Frame = 0


Query: 1   RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGRKSCRLRWFNQLDPRINRRPFSEE 60
           RGHWRPAED KL+ LV  +G +NWN IAEKLQGRSG KSCRLRWFNQLDPRINRR F+EE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSG-KSCRLRWFNQLDPRINRRAFTEE 157

Query: 61  EEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQH 107
           EEERLM AHR++GNKWA+IARL PGRTDN+VKNHWHV++ARK+R+H
Sbjct: 158 EEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYREH 202

[Close]

BLAST of MC11g1149 vs. ExPASy Swiss-Prot
Match: Q9SEZ4 (Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 4.9e-45
Identity = 84/105 (80.00%), Postives = 94/105 (89.52%), Query Frame = 0


Query: 1   RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGRKSCRLRWFNQLDPRINRRPFSEE 60
           RGHWRPAED KL+ LV  +G +NWN IAEKLQGRSG KSCRLRWFNQLDPRINRR F+EE
Sbjct: 107 RGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSG-KSCRLRWFNQLDPRINRRAFTEE 166

Query: 61  EEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQ 106
           EEERLM AHR++GNKWA+IARL PGRTDN+VKNHWHVI+ARK R+
Sbjct: 167 EEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFRE 210

[Close]

BLAST of MC11g1149 vs. NCBI nr
Match: XP_022153715.1 (transcription factor MYB52-like [Momordica charantia])

HSP 1 Score: 346 bits (887), Expect = 6.06e-120
Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 1   RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGRKSCRLRWFNQLDPRINRRPFSEE 60
           RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSG KSCRLRWFNQLDPRINRRPFSEE
Sbjct: 17  RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSG-KSCRLRWFNQLDPRINRRPFSEE 76

Query: 61  EEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIHGGGRFPYGPT 120
           EEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIHGGGRFPYGPT
Sbjct: 77  EEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIHGGGRFPYGPT 136

Query: 121 TAGVFFRQKSAIILNADIKRDEESADPKDIVPFIDFLGVGISSSTPNK 168
           TAGVFFRQKSAIILNADIKRDEESADPKDIVPFIDFLGVGISSSTPNK
Sbjct: 137 TAGVFFRQKSAIILNADIKRDEESADPKDIVPFIDFLGVGISSSTPNK 183

[Close]

BLAST of MC11g1149 vs. NCBI nr
Match: KAG0492273.1 (hypothetical protein HPP92_005671 [Vanilla planifolia])

HSP 1 Score: 207 bits (527), Expect = 4.88e-65
Identity = 110/175 (62.86%), Postives = 126/175 (72.00%), Query Frame = 0


Query: 1   RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGRKSCRLRWFNQLDPRINRRPFSEE 60
           RGHWRP EDEKL+RLVQ+FG +NWNSIAEKLQGRSG KSCRLRWFNQLDPRINRRPFSEE
Sbjct: 13  RGHWRPGEDEKLRRLVQEFGPQNWNSIAEKLQGRSG-KSCRLRWFNQLDPRINRRPFSEE 72

Query: 61  EEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIHGGGRF---PY 120
           EEERL+ AHRIHGN+WALIARL PGRTDNAVKNHWHVI+ARK R+  K  G       P+
Sbjct: 73  EEERLLFAHRIHGNRWALIARLFPGRTDNAVKNHWHVIMARKQRERAKFLGRRGLKMAPW 132

Query: 121 GPTTAGVFFRQKS-----AIILNADIKRDE-------ESADPKDIVPFIDFLGVG 160
           G  ++     + S     A I +  + R E        S +    +PFIDFLG+G
Sbjct: 133 GGFSSSCIDLESSPLPDVAFINHGFLLRSELMPSNRTPSEEQDKELPFIDFLGLG 186

[Close]

BLAST of MC11g1149 vs. NCBI nr
Match: KAG0494368.1 (hypothetical protein HPP92_005362 [Vanilla planifolia])

HSP 1 Score: 206 bits (524), Expect = 1.39e-64
Identity = 108/176 (61.36%), Postives = 127/176 (72.16%), Query Frame = 0


Query: 1   RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGRKSCRLRWFNQLDPRINRRPFSEE 60
           RGHWRP EDEKL+RLVQ+FG +NWNSIAEKLQGRSG KSCRLRWFNQLDPRINRRPFSEE
Sbjct: 13  RGHWRPGEDEKLRRLVQEFGPQNWNSIAEKLQGRSG-KSCRLRWFNQLDPRINRRPFSEE 72

Query: 61  EEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIHGGGRF---PY 120
           EEERL+ AHRIHGN+WALIARL PGRTDNAVKNHWHVI+ARK R+  K  G       P+
Sbjct: 73  EEERLLFAHRIHGNRWALIARLFPGRTDNAVKNHWHVIMARKQRERAKFLGRRGLKMAPW 132

Query: 121 GPTTAGVFFRQKSAI----------ILNADI---KRDEESADPKDIVPFIDFLGVG 160
           G  ++     + S +          +L +++    R       K++ PFIDFLG+G
Sbjct: 133 GGFSSSCIDLESSPLPDVAFFNHGFLLRSELMPSNRTPSEEQDKEL-PFIDFLGLG 186

[Close]

BLAST of MC11g1149 vs. NCBI nr
Match: XP_010260471.1 (PREDICTED: myb-related protein 3R-1-like [Nelumbo nucifera] >DAD22675.1 TPA_asm: hypothetical protein HUJ06_024138 [Nelumbo nucifera])

HSP 1 Score: 209 bits (533), Expect = 3.94e-64
Identity = 95/111 (85.59%), Postives = 106/111 (95.50%), Query Frame = 0


Query: 1   RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGRKSCRLRWFNQLDPRINRRPFSEE 60
           RGHWRPAEDEKL++LV+Q+G +NWNSIAEKLQGRSG KSCRLRWFNQLDPRINRRPFSEE
Sbjct: 17  RGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSG-KSCRLRWFNQLDPRINRRPFSEE 76

Query: 61  EEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIHG 111
           EEERL+AAHR+HGNKWALIARL PGRTDNAVKNHWHV++ARKHR+  K+HG
Sbjct: 77  EEERLLAAHRVHGNKWALIARLFPGRTDNAVKNHWHVVMARKHRERSKLHG 126

[Close]

BLAST of MC11g1149 vs. NCBI nr
Match: EEF32074.1 (r2r3-myb transcription factor, putative [Ricinus communis])

HSP 1 Score: 204 bits (519), Expect = 5.43e-64
Identity = 109/176 (61.93%), Postives = 129/176 (73.30%), Query Frame = 0


Query: 1   RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGRKSCRLRWFNQLDPRINRRPFSEE 60
           RGHWRPAEDEKL+ LV+++G  NWN+IAEKLQGRSG KSCRLRWFNQLDPRINR PF+EE
Sbjct: 4   RGHWRPAEDEKLKELVERYGPHNWNAIAEKLQGRSG-KSCRLRWFNQLDPRINRTPFTEE 63

Query: 61  EEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIHG--GGRFPYG 120
           EEERL+A+HRIHGN+WA+IARL PGRTDNAVKNHWHVI+ARK R+  ++      +    
Sbjct: 64  EEERLLASHRIHGNRWAVIARLFPGRTDNAVKNHWHVIMARKCRERSRLQAKRAAQCKKQ 123

Query: 121 PTTAGVFFR-----QKSAIILNADIKRDEESADP----KDIVPFIDFLGVGISSST 165
           P     F +      KS +I NA  +RD+E  D     K  + FIDFL VG SSST
Sbjct: 124 PVEFYDFLQVNTDSSKSEVIDNA--RRDDEEVDQEQKRKAGLAFIDFLSVGNSSST 176

[Close]

BLAST of MC11g1149 vs. ExPASy TrEMBL
Match: A0A6J1DHL3 (transcription factor MYB52-like OS=Momordica charantia OX=3673 GN=LOC111021169 PE=4 SV=1)

HSP 1 Score: 346 bits (887), Expect = 2.93e-120
Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 0


Query: 1   RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGRKSCRLRWFNQLDPRINRRPFSEE 60
           RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSG KSCRLRWFNQLDPRINRRPFSEE
Sbjct: 17  RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSG-KSCRLRWFNQLDPRINRRPFSEE 76

Query: 61  EEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIHGGGRFPYGPT 120
           EEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIHGGGRFPYGPT
Sbjct: 77  EEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIHGGGRFPYGPT 136

Query: 121 TAGVFFRQKSAIILNADIKRDEESADPKDIVPFIDFLGVGISSSTPNK 168
           TAGVFFRQKSAIILNADIKRDEESADPKDIVPFIDFLGVGISSSTPNK
Sbjct: 137 TAGVFFRQKSAIILNADIKRDEESADPKDIVPFIDFLGVGISSSTPNK 183

[Close]

BLAST of MC11g1149 vs. ExPASy TrEMBL
Match: A0A1U8A2L0 (myb-related protein 3R-1-like OS=Nelumbo nucifera OX=4432 GN=LOC104599571 PE=4 SV=1)

HSP 1 Score: 209 bits (533), Expect = 1.91e-64
Identity = 95/111 (85.59%), Postives = 106/111 (95.50%), Query Frame = 0


Query: 1   RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGRKSCRLRWFNQLDPRINRRPFSEE 60
           RGHWRPAEDEKL++LV+Q+G +NWNSIAEKLQGRSG KSCRLRWFNQLDPRINRRPFSEE
Sbjct: 17  RGHWRPAEDEKLRQLVEQYGPQNWNSIAEKLQGRSG-KSCRLRWFNQLDPRINRRPFSEE 76

Query: 61  EEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIHG 111
           EEERL+AAHR+HGNKWALIARL PGRTDNAVKNHWHV++ARKHR+  K+HG
Sbjct: 77  EEERLLAAHRVHGNKWALIARLFPGRTDNAVKNHWHVVMARKHRERSKLHG 126

[Close]

BLAST of MC11g1149 vs. ExPASy TrEMBL
Match: B9SWD8 (R2r3-myb transcription factor, putative OS=Ricinus communis OX=3988 GN=RCOM_1204520 PE=4 SV=1)

HSP 1 Score: 204 bits (519), Expect = 2.63e-64
Identity = 109/176 (61.93%), Postives = 129/176 (73.30%), Query Frame = 0


Query: 1   RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGRKSCRLRWFNQLDPRINRRPFSEE 60
           RGHWRPAEDEKL+ LV+++G  NWN+IAEKLQGRSG KSCRLRWFNQLDPRINR PF+EE
Sbjct: 4   RGHWRPAEDEKLKELVERYGPHNWNAIAEKLQGRSG-KSCRLRWFNQLDPRINRTPFTEE 63

Query: 61  EEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIHG--GGRFPYG 120
           EEERL+A+HRIHGN+WA+IARL PGRTDNAVKNHWHVI+ARK R+  ++      +    
Sbjct: 64  EEERLLASHRIHGNRWAVIARLFPGRTDNAVKNHWHVIMARKCRERSRLQAKRAAQCKKQ 123

Query: 121 PTTAGVFFR-----QKSAIILNADIKRDEESADP----KDIVPFIDFLGVGISSST 165
           P     F +      KS +I NA  +RD+E  D     K  + FIDFL VG SSST
Sbjct: 124 PVEFYDFLQVNTDSSKSEVIDNA--RRDDEEVDQEQKRKAGLAFIDFLSVGNSSST 176

[Close]

BLAST of MC11g1149 vs. ExPASy TrEMBL
Match: A0A0S3RDT7 (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G146900 PE=4 SV=1)

HSP 1 Score: 209 bits (532), Expect = 3.80e-64
Identity = 97/130 (74.62%), Postives = 111/130 (85.38%), Query Frame = 0


Query: 1   RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGRKSCRLRWFNQLDPRINRRPFSEE 60
           RGHWRPAEDE L++LV+Q+GA+NWNSIAEKLQGRSGRKSCRLRWFNQLDPRINRRPF+EE
Sbjct: 15  RGHWRPAEDENLRQLVEQYGAQNWNSIAEKLQGRSGRKSCRLRWFNQLDPRINRRPFTEE 74

Query: 61  EEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIHGGGRFPYGPT 120
           EEERL+AAHRIHGNKWALIARL PGRTDNAVKNHWHVI+ARK R+  K+ G   F     
Sbjct: 75  EEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGKRSFQDVYN 134

Query: 121 TAGVFFRQKS 130
            +  F  +++
Sbjct: 135 DSNTFLEKRT 144

[Close]

BLAST of MC11g1149 vs. ExPASy TrEMBL
Match: I6LFW8 (R2R3-MYB transcription factor MYB3 (Fragment) OS=Picea glauca OX=3330 PE=4 SV=1)

HSP 1 Score: 202 bits (513), Expect = 1.12e-63
Identity = 94/118 (79.66%), Postives = 106/118 (89.83%), Query Frame = 0


Query: 1   RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGRKSCRLRWFNQLDPRINRRPFSEE 60
           RGHWRPAEDEKL+ LV+Q+G +NWNSIAEKLQGRSG KSCRLRWFNQLDPRINRRPF+EE
Sbjct: 19  RGHWRPAEDEKLRELVEQYGPQNWNSIAEKLQGRSG-KSCRLRWFNQLDPRINRRPFTEE 78

Query: 61  EEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIHGGGRFPYG 118
           EEERL+AAHR+HGNKWA+IARL PGRTDNAVKNHWHVI+ARK R+  +I+G  R   G
Sbjct: 79  EEERLLAAHRLHGNKWAMIARLFPGRTDNAVKNHWHVIMARKFRERSRIYGKRRSSCG 135

[Close]

BLAST of MC11g1149 vs. TAIR 10
Match: AT1G73410.1 (myb domain protein 54 )

HSP 1 Score: 190.3 bits (482), Expect = 1.3e-48
Identity = 96/158 (60.76%), Postives = 115/158 (72.78%), Query Frame = 0


Query: 1   RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGRKSCRLRWFNQLDPRINRRPFSEE 60
           RGHWRPAEDEKL+ LV+Q+G  NWN+IA KL GRSG KSCRLRWFNQLDPRINR PF+EE
Sbjct: 6   RGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSG-KSCRLRWFNQLDPRINRNPFTEE 65

Query: 61  EEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIHGGGRFPYGPT 120
           EEERL+AAHRIHGN+W++IARL PGRTDNAVKNHWHVI+AR+ RQ  K     R     T
Sbjct: 66  EEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQTSK----PRLLPSTT 125

Query: 121 TAGVFFRQKSAIILNADIKRDEESADPKDIVP--FIDF 157
           ++      +  ++ +     +  S D K I P  FI+F
Sbjct: 126 SSSSLMASEQIMMSSGGYNHNYSSDDRKKIFPADFINF 158

[Close]

BLAST of MC11g1149 vs. TAIR 10
Match: AT1G17950.1 (myb domain protein 52 )

HSP 1 Score: 188.7 bits (478), Expect = 3.7e-48
Identity = 85/113 (75.22%), Postives = 99/113 (87.61%), Query Frame = 0


Query: 1   RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGRKSCRLRWFNQLDPRINRRPFSEE 60
           RGHWRPAEDEKL+ LV+QFG  NWN+IA+KL GRSG KSCRLRWFNQLDPRINR PF+EE
Sbjct: 5   RGHWRPAEDEKLRELVEQFGPHNWNAIAQKLSGRSG-KSCRLRWFNQLDPRINRNPFTEE 64

Query: 61  EEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQHFKIHGGG 114
           EEERL+A+HRIHGN+W++IAR  PGRTDNAVKNHWHVI+AR+ R+  K+   G
Sbjct: 65  EEERLLASHRIHGNRWSVIARFFPGRTDNAVKNHWHVIMARRGRERSKLRPRG 116

[Close]

BLAST of MC11g1149 vs. TAIR 10
Match: AT1G26780.1 (myb domain protein 117 )

HSP 1 Score: 185.3 bits (469), Expect = 4.1e-47
Identity = 84/106 (79.25%), Postives = 96/106 (90.57%), Query Frame = 0


Query: 1   RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGRKSCRLRWFNQLDPRINRRPFSEE 60
           RGHWRPAED KL+ LV  +G +NWN IAEKLQGRSG KSCRLRWFNQLDPRINRR F+EE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSG-KSCRLRWFNQLDPRINRRAFTEE 157

Query: 61  EEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQH 107
           EEERLM AHR++GNKWA+IARL PGRTDN+VKNHWHV++ARK+R+H
Sbjct: 158 EEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYREH 202

[Close]

BLAST of MC11g1149 vs. TAIR 10
Match: AT1G26780.2 (myb domain protein 117 )

HSP 1 Score: 185.3 bits (469), Expect = 4.1e-47
Identity = 84/106 (79.25%), Postives = 96/106 (90.57%), Query Frame = 0


Query: 1   RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGRKSCRLRWFNQLDPRINRRPFSEE 60
           RGHWRPAED KL+ LV  +G +NWN IAEKLQGRSG KSCRLRWFNQLDPRINRR F+EE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSG-KSCRLRWFNQLDPRINRRAFTEE 157

Query: 61  EEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQH 107
           EEERLM AHR++GNKWA+IARL PGRTDN+VKNHWHV++ARK+R+H
Sbjct: 158 EEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYREH 202

[Close]

BLAST of MC11g1149 vs. TAIR 10
Match: AT1G69560.1 (myb domain protein 105 )

HSP 1 Score: 182.2 bits (461), Expect = 3.5e-46
Identity = 84/105 (80.00%), Postives = 94/105 (89.52%), Query Frame = 0


Query: 1   RGHWRPAEDEKLQRLVQQFGARNWNSIAEKLQGRSGRKSCRLRWFNQLDPRINRRPFSEE 60
           RGHWRPAED KL+ LV  +G +NWN IAEKLQGRSG KSCRLRWFNQLDPRINRR F+EE
Sbjct: 107 RGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSG-KSCRLRWFNQLDPRINRRAFTEE 166

Query: 61  EEERLMAAHRIHGNKWALIARLLPGRTDNAVKNHWHVIIARKHRQ 106
           EEERLM AHR++GNKWA+IARL PGRTDN+VKNHWHVI+ARK R+
Sbjct: 167 EEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFRE 210

The following BLAST results are available for this feature:

BLAST of MC11g1149 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FX36	1.8e-47	60.76	Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1	[more]
Q6R0C4	5.2e-47	75.22	Transcription factor MYB52 OS=Arabidopsis thaliana OX=3702 GN=MYB52 PE=2 SV=1	[more]
Q5NBM8	2.6e-46	81.90	Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV...	[more]
Q9LQX5	5.8e-46	79.25	Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1	[more]
Q9SEZ4	4.9e-45	80.00	Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1	[more]

BLAST of MC11g1149 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153715.1	6.06e-120	99.40	transcription factor MYB52-like [Momordica charantia]	[more]
KAG0492273.1	4.88e-65	62.86	hypothetical protein HPP92_005671 [Vanilla planifolia]	[more]
KAG0494368.1	1.39e-64	61.36	hypothetical protein HPP92_005362 [Vanilla planifolia]	[more]
XP_010260471.1	3.94e-64	85.59	PREDICTED: myb-related protein 3R-1-like [Nelumbo nucifera] >DAD22675.1 TPA_asm:...	[more]
EEF32074.1	5.43e-64	61.93	r2r3-myb transcription factor, putative [Ricinus communis]	[more]

BLAST of MC11g1149 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DHL3	2.93e-120	99.40	transcription factor MYB52-like OS=Momordica charantia OX=3673 GN=LOC111021169 P...	[more]
A0A1U8A2L0	1.91e-64	85.59	myb-related protein 3R-1-like OS=Nelumbo nucifera OX=4432 GN=LOC104599571 PE=4 S...	[more]
B9SWD8	2.63e-64	61.93	R2r3-myb transcription factor, putative OS=Ricinus communis OX=3988 GN=RCOM_1204...	[more]
A0A0S3RDT7	3.80e-64	74.62	Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G...	[more]
I6LFW8	1.12e-63	79.66	R2R3-MYB transcription factor MYB3 (Fragment) OS=Picea glauca OX=3330 PE=4 SV=1	[more]

BLAST of MC11g1149 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G73410.1	1.3e-48	60.76	myb domain protein 54	[more]
AT1G17950.1	3.7e-48	75.22	myb domain protein 52	[more]
AT1G26780.1	4.1e-47	79.25	myb domain protein 117	[more]
AT1G26780.2	4.1e-47	79.25	myb domain protein 117	[more]
AT1G69560.1	3.5e-46	80.00	myb domain protein 105	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 53..101 e-value: 4.2E-15 score: 66.2 coord: 1..50 e-value: 6.2E-8 score: 42.3
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 49..99 score: 9.860335
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 1..48 score: 10.17387
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 56..96 e-value: 6.66697E-12 score: 55.2742
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 4..46 e-value: 1.55852E-11 score: 54.5038
None	No IPR available	GENE3D	1.10.10.60		coord: 55..110 e-value: 1.8E-18 score: 68.3
None	No IPR available	GENE3D	1.10.10.60		coord: 1..53 e-value: 4.1E-21 score: 76.7
None	No IPR available	PANTHER	PTHR45614	MYB PROTEIN-RELATED	coord: 1..113
None	No IPR available	PANTHER	PTHR45614:SF176	OS08G0435700 PROTEIN	coord: 1..113
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 54..97 e-value: 6.4E-16 score: 58.3 coord: 1..47 e-value: 2.2E-12 score: 47.0
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 49..103 score: 27.612503
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1..48 score: 17.746964
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 1..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g1149.1	MC11g1149.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding