MC11g1141 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g1141
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	ribosome maturation protein SBDS
Location	MC11: 9849770 .. 9854569 (-)
RNA-Seq Expression	MC11g1141
Synteny	MC11g1141

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

ACATGAGTTTTTACAAGTTTGATTTTTTCTTGGGTACAACATATCGAACGCGAGATTCGAACTGAGGACGTATTGATCGGAAATAGGTGCCCTATTTAATCTTAAAAATTTTCCAGACGGCTCAAGAGTATTGAAAAGCTTCGCTTGGCGTGTGTGGTGGTTTTCATTCTCCAGTCGGCAAAATTCAGAAGGGCGAATTCGCGAGTGAAGGAGAAGAGAGCGCAAAGATGTCCCGATCGCTGGTGCAGCCGATCGGACAGAAGAGGCTCACCAACGTCGCGGTGGTTCGTTTGAAAAGGCACGGTCTCCGCTTCGAGATTGCTTGTTACAAGAACAAGGTCCTTTCATGGCGTTCTGGCGTGTAAGCTCCTACCCACGTCCCCAAAACCCTACCAATTTTCGCTCTGAATTATCTGATTTCCTTCGGGCTTTGTTGGGTTCTTATTCTTTGTTATAGTTTTGGATTTAATGCGTGAGTTTGAAATTTTCAATAGGACAGAAATACGGGGAGGATCCATTTGGCCTGTGGATTAGATAAAAAAAAAAAAAAACCCTTCTTCAGTTTTGTAATTTGTTTGTATCAGTTCGCGATGGGAGAGTTTGGGGAGGGAGAGGAGTTGGAGTTACTGGCTTTCAACTGCACATTCAGGAAGATTGTTTGGTGGGTAGTGGAAATTGGGAATTCGATTGGTGAGGAGAAACTATTTGAGGGCTGGAACGATAGGGATATATGAGAGAAGATTTAAAGACTGTATTTCGAATTTCTATCATTTAGGGGTAGACTGATTTTGAACTTGCATCAATTGGAACGTCGTGATGGTGAATAATCTTTCTTTTAGAGTCAATATTCTTCTGCCTTATGGGTGTGGCTGCTTGGTGATAATGTGCAGGGGAAGAAATTCTGTTTCTTAAGATTGAATTCTGTTTAATAACCTACCCCCGTAGTTTTATACTTTTTAAAAATGATTACTTATACCATATAGTTCATTACATAGCAAAAGATGCTTTACATCATTGCCTTTTTTTGCAAATCATACGATTGCGATTAAATATATTTGTAAATACACCTCTTGTTGAGTGACAGCATCGGTTGGAGTGGTAAATTATTCAAGTAGACGGATATGCATATAAATAATCAGACCGTTTTTAAACTATACGCCATACAGCAATTTGCAACTGCATCAAACTACGTGGTTGTATCTTGCAGTTATCATTTTGTTAATTCATTTTCCTTCCCAAATGTGTTCTCATTGACCTACTTTGGTGTTAATCAGTATTTTTATTGCATAAAGTGTCAACTATGAACTTGATAATGTATGTTGCGGCAGGGAGAAAGATTTGGATGAGGTTTTGCAATCGCAGATTGTTTATTCAAATGTTTCAAAAGGAGTTCTTGCGAAAACAAAAGATTTAAAGGCAGCTTTCGACACAGATGATCAGACGGCCATTTGTTTGAAGGTTGTGGAGTTCCTTCATTAATGGTTTTTGTATTTCTTTTCATCACATTTAGTGATTTACGAACTATTTTCTTTTTTTCCTGATCAGTGTACGTTTTTTATGGTTATTTCTTCCTAACTGATGAAATTATCAACTTCATGGTACTAGATTCTAAAAGAAGGGGAACTTCAAATTGCAGTGAAGGAGAGGGAGGCTCAATTATCCAATCAATTTCGTGATATTGCAACCATTGTTATGCAGAAGACCTTCAATCCTGAAACTAAACGCCCTTACACCATTAGCATGATCGAGCGGCTGATGCGTGAAATTCATTTTGCCATTGATCCAAATCACAGTTCAAAGAAACAGGTAGGTTGATGCTTTTTCCCGTACGCAGGATTAACGTTCTTCTTCCTACAATTTGTATAACTCTAAATTTAAGGCCGTGTTTCTCAGCTGATATTCCTTATGATATGCAGGCACTTGAGGTCATTCATGAGCTCCAAAAACAGTTTCCAATTAAACGTTCACCTATGAGAATACGCTATACTGTACCTGAACAGAATTTTCCATCTCTTCTTGAAAAGTTAAATGCATGGAATGCTAGTAACCTTTCCAATGATCAGTCTGGAAGTCAGCAACGAAGTGTTGTAAGTCAGTGTTTTTTTTTTTTTTTTGTAATCGTTGCTTCGCAGATTTTTTCCTCTCCAACGTGCTCCTAACGATATCATTATTTCACTATGATTGATTCAGATACATTTGAAAGTCATTAACTCAGAGTCATATGTTGAAGTATTAGTTCCACCTATAGAAGACTTAACATCTTTCTATTCTTCATTCCAATGTAGTGTTACGTTGTAATGTTGACGAATTACTCGAGTTTCATATGAAGTTTGTCAGAAAAACTGGTCTGTCTGTGCATAGTCAACTAGTGTTGAAATCATTTTTACATGTCATTGGACGTTTCATGCATTAACTCAATATGTGGTCTCTTGTGAGTATCTTATTTGGCAGCAAAGAAGTTTCTGCATTGTCTTCTTCTCTTTGTTGGTTCAAATGTTCCATGGTCCCGTTTAGATCCTTGCCTTTATTGTGGATTGTTACTGACCCCTTCATATATGCACTTTTCATTACTAATTGACAATGTCTTTGTTGGATGCACATATGACTGGGAATTGAGTTATTTTGTTTGATTGTTGCGCAGATTTGTGAATTGGATCCTAGCTTTTATCGAGACTGTAATCCCTTAATGAGTGAACTACAAGGAAGATTTGAAGTTCTCTCTTTCTGTTTGCACGAGGAAGGGGACACCAATGTGGATCAATATGATGACGATTTCGACAATGGGGAACTGCCGCCTAGGCAAGTCAAGGAATCGTTGATTCCTCAGCTAAGTGAAGCTTTACAAAGACAGACAATCTCCGTCGAGGGTGAAAATGCACCAAAGGAAGGAAAACGCTGCAGCACATGTAACGTTGCTGTGGGGGATGCTACTCAATTTAGAGAGCATCACAAGGGCGAATGGCATAAGCATAATGTGAAGCGCAAAACCAAGAATCTCCCTCCTCTGACCGAAGAAGAGTGCATGGTTGAATTGGCAATGGGCAATTCCGAGTCCGATTTGAAGGATTATTCATTTTGAGCTGCGCACTTTGAATGCTCTGGTTGTATCGGTATGAGTTTGTTACTTCAGTTTTGGAGTTTAATATTGAACGTCCTGTTGGGAAGATACTGTATTTGGTTAGTGATAGCTAGTATCTACGAGTCCTATATGACAGTTTCAATGGTGTCACGATCTCAGTTTTTGGGTTTCAATGATGTTCGATTTTAAACCGAGATTGTATGACAATTTCATAACACAATCCATGTTTTATCCCATAGTAGTAGTGTAATACAAGCTTGTAACATTCAAAACTGTAGATTTCAATGATTTGCGAAAGCTAAAAATGACTATCACTGTTTAATTATGGCTTCTGTTTACAGATCTCTGTTTAAAACTTGAAATGAATTATATCAAAGCAAAACCTTGTACGCTGCCCCTGTTACAGTTTGTATGAAACAGAACAGGAATCCATTCAGCTGAGAATGAAAGTTTGGCGCTGTAAAATTTTGCGTATTCCAAAATTACTCTTTAAGCCAAGGTAAAAGATTAACAAAAGGGTAAATCTAAAATGCAGAGGGAAACTCAAAAAAAGAAAAAGAAAAAAGAAAAAAGAAAAAAAGCACAAGTTGTACATTTGAAATCAAAGAAACTCACCCCACCCAATCAACAACTCTGCTAGCCACCACATTTTTTCCTATTAATATTTTAAATAACAAATTAGTACAGAACGTGAGCCATACCCTCGTTGTTTTGTTCGTGTGATTTTCCATCGGTAGAGGGCAATTCTGACAATCCTCTGGCTGTCACAAGCAGCTTCAATAATCGAATTGAAGATTATTAAACCCGTTAACTCCAAGTCCGTTAAGAAGCTGGTCCCCCAAATCTTGATGGTTTATGCTCTGTTCTCGAGCCAATGACGCCATCCCGATTCTCCCGTTCGAAATCGAGTTATTTCCCATTGCAGACTTCATGCCATTGACCATGGAAGCCTGAGAAAATCCCCCACCCATCGAGCCATATCCAGCACTCCTGATGCCAGATACACTATTAGCAGCTCCACTCCCAACGAGGCAGTTCCGTCCATTGAGGCTCATAATGTTGTTCGTTGGCAGCATCCCGTGAACAGATTTCACATCGTCCCCTAGAGAGGAAATGCCAGTCATTGTGTTCATCCCATTTAGTTGGTTCGACATCATGTATTCCTGAATGATCTTTTGCACGGAACTCTGGGAGTCGTTTTGATCAGCTTCAGAAGAGTGTGTTGGCTGCTGTTGCAAGGAAACATTTGCCGGAGAATTAGTGGCACTCATGTGATTGGTAGTTGTTGCAGTACCAATTGATGATTGTGGGGGATTGGCAGATGAGGACAGTGTAGGCGACTGGAAGGACGAGTTCGCTTGTGCCTGAGCAATCACGGTGGAGGAACCTGGGGACGATATTTGTGCAGAATTTGCAGCATACGGGCTGCTTGCACTGTTCATAGAGTTCTGCTGTCTGGAGTTCATGGAGTTCTGGTGGAGTAACCCAACAATGGTACTAGCAGGAGATGAGGTTGATGCTTGATTAACAGAGTTATTTGCTCCAGTAACACCACTGTTAGCAGCAAGCTGCATAGAAGCAGCCTGAACAGAGCTTTGGTCACCGTTTGTGTTTTGATCCATTGTTTGCTGAGGCTGAGGTAACTGTTGCTCGGTATTTTGAGGTTGGCTGTGGAAGCCTGGCGAAGCGTTCGTCTTTCGCGGAAACTTGGCCAAACTCTC

mRNA sequence

ACATGAGTTTTTACAAGTTTGATTTTTTCTTGGGTACAACATATCGAACGCGAGATTCGAACTGAGGACGTATTGATCGGAAATAGGTGCCCTATTTAATCTTAAAAATTTTCCAGACGGCTCAAGAGTATTGAAAAGCTTCGCTTGGCGTGTGTGGTGGTTTTCATTCTCCAGTCGGCAAAATTCAGAAGGGCGAATTCGCGAGTGAAGGAGAAGAGAGCGCAAAGATGTCCCGATCGCTGGTGCAGCCGATCGGACAGAAGAGGCTCACCAACGTCGCGGTGGTTCGTTTGAAAAGGCACGGTCTCCGCTTCGAGATTGCTTGTTACAAGAACAAGGTCCTTTCATGGCGTTCTGGCGTGGAGAAAGATTTGGATGAGGTTTTGCAATCGCAGATTGTTTATTCAAATGTTTCAAAAGGAGTTCTTGCGAAAACAAAAGATTTAAAGGCAGCTTTCGACACAGATGATCAGACGGCCATTTGTTTGAAGATTCTAAAAGAAGGGGAACTTCAAATTGCAGTGAAGGAGAGGGAGGCTCAATTATCCAATCAATTTCGTGATATTGCAACCATTGTTATGCAGAAGACCTTCAATCCTGAAACTAAACGCCCTTACACCATTAGCATGATCGAGCGGCTGATGCGTGAAATTCATTTTGCCATTGATCCAAATCACAGTTCAAAGAAACAGGCACTTGAGGTCATTCATGAGCTCCAAAAACAGTTTCCAATTAAACGTTCACCTATGAGAATACGCTATACTGTACCTGAACAGAATTTTCCATCTCTTCTTGAAAAGTTAAATGCATGGAATGCTAGTAACCTTTCCAATGATCAGTCTGGAAGTCAGCAACGAAGTGTTATTTGTGAATTGGATCCTAGCTTTTATCGAGACTGTAATCCCTTAATGAGTGAACTACAAGGAAGATTTGAAGTTCTCTCTTTCTGTTTGCACGAGGAAGGGGACACCAATGTGGATCAATATGATGACGATTTCGACAATGGGGAACTGCCGCCTAGGCAAGTCAAGGAATCGTTGATTCCTCAGCTAAGTGAAGCTTTACAAAGACAGACAATCTCCGTCGAGGGTGAAAATGCACCAAAGGAAGGAAAACGCTGCAGCACATGTAACGTTGCTGTGGGGGATGCTACTCAATTTAGAGAGCATCACAAGGGCGAATGGCATAAGCATAATGTGAAGCGCAAAACCAAGAATCTCCCTCCTCTGACCGAAGAAGAGTGCATGGTTGAATTGGCAATGGGCAATTCCGAGTCCGATTTGAAGGATTATTCATTTTGAGCTGCGCACTTTGAATGCTCTGGTTGTATCGGTATGAGTTTGTTACTTCAGTTTTGGAGTTTAATATTGAACGTCCTGTTGGGAAGATACTGTATTTGGTTAGTGATAGCTAGTATCTACGAGTCCTATATGACAGTTTCAATGGTGTCACGATCTCAGTTTTTGGGTTTCAATGATGTTCGATTTTAAACCGAGATTGTATGACAATTTCATAACACAATCCATGTTTTATCCCATAGTAGTAGTGTAATACAAGCTTGTAACATTCAAAACTGTAGATTTCAATGATTTGCGAAAGCTAAAAATGACTATCACTGTTTAATTATGGCTTCTGTTTACAGATCTCTGTTTAAAACTTGAAATGAATTATATCAAAGCAAAACCTTGTACGCTGCCCCTGTTACAGTTTGTATGAAACAGAACAGGAATCCATTCAGCTGAGAATGAAAGTTTGGCGCTGTAAAATTTTGCGTATTCCAAAATTACTCTTTAAGCCAAGGTAAAAGATTAACAAAAGGGTAAATCTAAAATGCAGAGGGAAACTCAAAAAAAGAAAAAGAAAAAAGAAAAAAGAAAAAAAGCACAAGTTGTACATTTGAAATCAAAGAAACTCACCCCACCCAATCAACAACTCTGCTAGCCACCACATTTTTTCCTATTAATATTTTAAATAACAAATTAGTACAGAACGTGAGCCATACCCTCGTTGTTTTGTTCGTGTGATTTTCCATCGGTAGAGGGCAATTCTGACAATCCTCTGGCTGTCACAAGCAGCTTCAATAATCGAATTGAAGATTATTAAACCCGTTAACTCCAAGTCCGTTAAGAAGCTGGTCCCCCAAATCTTGATGGTTTATGCTCTGTTCTCGAGCCAATGACGCCATCCCGATTCTCCCGTTCGAAATCGAGTTATTTCCCATTGCAGACTTCATGCCATTGACCATGGAAGCCTGAGAAAATCCCCCACCCATCGAGCCATATCCAGCACTCCTGATGCCAGATACACTATTAGCAGCTCCACTCCCAACGAGGCAGTTCCGTCCATTGAGGCTCATAATGTTGTTCGTTGGCAGCATCCCGTGAACAGATTTCACATCGTCCCCTAGAGAGGAAATGCCAGTCATTGTGTTCATCCCATTTAGTTGGTTCGACATCATGTATTCCTGAATGATCTTTTGCACGGAACTCTGGGAGTCGTTTTGATCAGCTTCAGAAGAGTGTGTTGGCTGCTGTTGCAAGGAAACATTTGCCGGAGAATTAGTGGCACTCATGTGATTGGTAGTTGTTGCAGTACCAATTGATGATTGTGGGGGATTGGCAGATGAGGACAGTGTAGGCGACTGGAAGGACGAGTTCGCTTGTGCCTGAGCAATCACGGTGGAGGAACCTGGGGACGATATTTGTGCAGAATTTGCAGCATACGGGCTGCTTGCACTGTTCATAGAGTTCTGCTGTCTGGAGTTCATGGAGTTCTGGTGGAGTAACCCAACAATGGTACTAGCAGGAGATGAGGTTGATGCTTGATTAACAGAGTTATTTGCTCCAGTAACACCACTGTTAGCAGCAAGCTGCATAGAAGCAGCCTGAACAGAGCTTTGGTCACCGTTTGTGTTTTGATCCATTGTTTGCTGAGGCTGAGGTAACTGTTGCTCGGTATTTTGAGGTTGGCTGTGGAAGCCTGGCGAAGCGTTCGTCTTTCGCGGAAACTTGGCCAAACTCTC

Coding sequence (CDS)

ATGTCCCGATCGCTGGTGCAGCCGATCGGACAGAAGAGGCTCACCAACGTCGCGGTGGTTCGTTTGAAAAGGCACGGTCTCCGCTTCGAGATTGCTTGTTACAAGAACAAGGTCCTTTCATGGCGTTCTGGCGTGGAGAAAGATTTGGATGAGGTTTTGCAATCGCAGATTGTTTATTCAAATGTTTCAAAAGGAGTTCTTGCGAAAACAAAAGATTTAAAGGCAGCTTTCGACACAGATGATCAGACGGCCATTTGTTTGAAGATTCTAAAAGAAGGGGAACTTCAAATTGCAGTGAAGGAGAGGGAGGCTCAATTATCCAATCAATTTCGTGATATTGCAACCATTGTTATGCAGAAGACCTTCAATCCTGAAACTAAACGCCCTTACACCATTAGCATGATCGAGCGGCTGATGCGTGAAATTCATTTTGCCATTGATCCAAATCACAGTTCAAAGAAACAGGCACTTGAGGTCATTCATGAGCTCCAAAAACAGTTTCCAATTAAACGTTCACCTATGAGAATACGCTATACTGTACCTGAACAGAATTTTCCATCTCTTCTTGAAAAGTTAAATGCATGGAATGCTAGTAACCTTTCCAATGATCAGTCTGGAAGTCAGCAACGAAGTGTTATTTGTGAATTGGATCCTAGCTTTTATCGAGACTGTAATCCCTTAATGAGTGAACTACAAGGAAGATTTGAAGTTCTCTCTTTCTGTTTGCACGAGGAAGGGGACACCAATGTGGATCAATATGATGACGATTTCGACAATGGGGAACTGCCGCCTAGGCAAGTCAAGGAATCGTTGATTCCTCAGCTAAGTGAAGCTTTACAAAGACAGACAATCTCCGTCGAGGGTGAAAATGCACCAAAGGAAGGAAAACGCTGCAGCACATGTAACGTTGCTGTGGGGGATGCTACTCAATTTAGAGAGCATCACAAGGGCGAATGGCATAAGCATAATGTGAAGCGCAAAACCAAGAATCTCCCTCCTCTGACCGAAGAAGAGTGCATGGTTGAATTGGCAATGGGCAATTCCGAGTCCGATTTGAAGGATTATTCATTTTGA

Protein sequence

MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQTAICLKILKEGELQIAVKEREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLEKLNAWNASNLSNDQSGSQQRSVICELDPSFYRDCNPLMSELQGRFEVLSFCLHEEGDTNVDQYDDDFDNGELPPRQVKESLIPQLSEALQRQTISVEGENAPKEGKRCSTCNVAVGDATQFREHHKGEWHKHNVKRKTKNLPPLTEEECMVELAMGNSESDLKDYSF

Homology

[Close]

BLAST of MC11g1141 vs. ExPASy Swiss-Prot
Match: P70122 (Ribosome maturation protein SBDS OS=Mus musculus OX=10090 GN=Sbds PE=1 SV=4)

HSP 1 Score: 247.7 bits (631), Expect = 2.0e-64
Identity = 133/247 (53.85%), Postives = 174/247 (70.45%), Query Frame = 0


Query: 4   SLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVS 63
           S+  P  Q RLTNVAVVR+KR G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVS
Sbjct: 2   SIFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61

Query: 64  KGVLAKTKDLKAAFDTDDQTAICLKILKEGELQIAVKEREAQLSNQFRDIATIVMQKTFN 123
           KG +AK +DL +AF TDDQT IC +IL +GE+Q++ KER  QL   FRDIATIV  K  N
Sbjct: 62  KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121

Query: 124 PETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQ 183
           PETKRPYT+ +IER M++IH+++ PN S+K+QALEVI +L+++  I+R+ MR+R+ +P  
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVN 181

Query: 184 NFPSLLEKLNAWNASNLSNDQSGSQQRSVICELDPSFYRDCNPLM-SELQGR--FEVLSF 243
               L EKL       +   +  SQQ  ++C +DP  +R+ + L+  E +GR   EVLS 
Sbjct: 182 EGKKLKEKLKP--LMKVVESEDYSQQLEIVCLIDPGCFREIDELIKKETKGRGSLEVLSL 241

Query: 244 CLHEEGD 248
              EEGD
Sbjct: 242 KDVEEGD 246

[Close]

BLAST of MC11g1141 vs. ExPASy Swiss-Prot
Match: Q5RK30 (Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.6e-64
Identity = 131/247 (53.04%), Postives = 174/247 (70.45%), Query Frame = 0


Query: 4   SLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVS 63
           S+  P  Q RLTNVAVVR+KR G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVS
Sbjct: 2   SIFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61

Query: 64  KGVLAKTKDLKAAFDTDDQTAICLKILKEGELQIAVKEREAQLSNQFRDIATIVMQKTFN 123
           KG +AK +DL +AF TDDQT IC +IL +GE+Q++ KER  QL   FRDIATIV  K  N
Sbjct: 62  KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121

Query: 124 PETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQ 183
           PETKRPYT+ +IER M++IH+++ PN S+K+QALEVI +L+++  I+R+ MR+R+ +P  
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFLLPVN 181

Query: 184 NFPSLLEKLNAWNASNLSNDQSGSQQRSVICELDPSFYRDCNPLM---SELQGRFEVLSF 243
               L EKL       +   +  SQQ  ++C +DP  +R+ + L+   ++ +G  EVLS 
Sbjct: 182 EGKKLKEKLKP--LMKVVESEDYSQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLSL 241

Query: 244 CLHEEGD 248
              EEGD
Sbjct: 242 KDVEEGD 246

[Close]

BLAST of MC11g1141 vs. ExPASy Swiss-Prot
Match: Q3SWZ6 (Ribosome maturation protein SBDS OS=Bos taurus OX=9913 GN=SBDS PE=2 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.0e-63
Identity = 130/247 (52.63%), Postives = 173/247 (70.04%), Query Frame = 0


Query: 4   SLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVS 63
           S+  P  Q RLTNVAVVR+KR G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVS
Sbjct: 2   SIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61

Query: 64  KGVLAKTKDLKAAFDTDDQTAICLKILKEGELQIAVKEREAQLSNQFRDIATIVMQKTFN 123
           KG +AK +DL +AF TDDQT IC +IL +GE+Q++ KER  QL   FRDIATIV  K  N
Sbjct: 62  KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121

Query: 124 PETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQ 183
           PETKRPYT+ +IER M++IH+++ PN S+K+QALEVI +L+++  I+R+ MR+R+ +P  
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVN 181

Query: 184 NFPSLLEKLNAWNASNLSNDQSGSQQRSVICELDPSFYRDCNPLM---SELQGRFEVLSF 243
               L EKL       +   +   QQ  ++C +DP  +R+ + L+   ++ +G  EVLS 
Sbjct: 182 EGKKLKEKLKP--LIKVIESEDYGQQLEIVCLIDPGCFREVDELIKKETKGKGSLEVLSL 241

Query: 244 CLHEEGD 248
              EEGD
Sbjct: 242 KDVEEGD 246

[Close]

BLAST of MC11g1141 vs. ExPASy Swiss-Prot
Match: Q9Y3A5 (Ribosome maturation protein SBDS OS=Homo sapiens OX=9606 GN=SBDS PE=1 SV=4)

HSP 1 Score: 241.1 bits (614), Expect = 1.9e-62
Identity = 128/247 (51.82%), Postives = 172/247 (69.64%), Query Frame = 0


Query: 4   SLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVS 63
           S+  P  Q RLTNVAVVR+KR G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVS
Sbjct: 2   SIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61

Query: 64  KGVLAKTKDLKAAFDTDDQTAICLKILKEGELQIAVKEREAQLSNQFRDIATIVMQKTFN 123
           KG +AK +DL +AF TDDQT IC +IL +GE+Q++ KER  QL   FRDIATIV  K  N
Sbjct: 62  KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121

Query: 124 PETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQ 183
           PETKRPYT+ +IER M++IH+++  N S+K+QALEVI +L+++  I+R+ MR+R+ +P  
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVN 181

Query: 184 NFPSLLEKLNAWNASNLSNDQSGSQQRSVICELDPSFYRDCNPLM---SELQGRFEVLSF 243
               L EKL       +   +   QQ  ++C +DP  +R+ + L+   ++ +G  EVL+ 
Sbjct: 182 EGKKLKEKLKP--LIKVIESEDYGQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNL 241

Query: 244 CLHEEGD 248
              EEGD
Sbjct: 242 KDVEEGD 246

[Close]

BLAST of MC11g1141 vs. ExPASy Swiss-Prot
Match: Q5RAZ2 (Ribosome maturation protein SBDS OS=Pongo abelii OX=9601 GN=SBDS PE=2 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.9e-62
Identity = 128/247 (51.82%), Postives = 172/247 (69.64%), Query Frame = 0


Query: 4   SLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVS 63
           S+  P  Q RLTNVAVVR+KR G RFEIACYKNKV+ WRSGVEKDLDEVLQ+  V+ NVS
Sbjct: 2   SIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61

Query: 64  KGVLAKTKDLKAAFDTDDQTAICLKILKEGELQIAVKEREAQLSNQFRDIATIVMQKTFN 123
           KG +AK +DL +AF TDDQT IC +IL +GE+Q++ KER  QL   FRDIATIV  K  N
Sbjct: 62  KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121

Query: 124 PETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQ 183
           PETKRPYT+ +IER M++IH+++  N S+K+QALEVI +L+++  I+R+ MR+R+ +P  
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVN 181

Query: 184 NFPSLLEKLNAWNASNLSNDQSGSQQRSVICELDPSFYRDCNPLM---SELQGRFEVLSF 243
               L EKL       +   +   QQ  ++C +DP  +R+ + L+   ++ +G  EVL+ 
Sbjct: 182 EGKKLKEKLKP--LIKVIESEDYGQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNL 241

Query: 244 CLHEEGD 248
              EEGD
Sbjct: 242 KDVEEGD 246

[Close]

BLAST of MC11g1141 vs. NCBI nr
Match: XP_022153710.1 (ribosome maturation protein SBDS [Momordica charantia])

HSP 1 Score: 717 bits (1850), Expect = 1.19e-260
Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFDTDDQTAICLKILKEGELQIAVKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAFDTDDQTAICLKILKEGELQIAVKEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFDTDDQTAICLKILKEGELQIAVKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180
           TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180

Query: 181 PEQNFPSLLEKLNAWNASNLSNDQSGSQQRSVICELDPSFYRDCNPLMSELQGRFEVLSF 240
           PEQNFPSLLEKLNAWNASNLSNDQSGSQQRSVICELDPSFYRDCNPLMSELQGRFEVLSF
Sbjct: 181 PEQNFPSLLEKLNAWNASNLSNDQSGSQQRSVICELDPSFYRDCNPLMSELQGRFEVLSF 240

Query: 241 CLHEEGDTNVDQYDDDFDNGELPPRQVKESLIPQLSEALQRQTISVEGENAPKEGKRCST 300
           CLHEEGDTNVDQYDDDFDNGELPPRQVKESLIPQLSEALQRQTISVEGENAPKEGKRCST
Sbjct: 241 CLHEEGDTNVDQYDDDFDNGELPPRQVKESLIPQLSEALQRQTISVEGENAPKEGKRCST 300

Query: 301 CNVAVGDATQFREHHKGEWHKHNVKRKTKNLPPLTEEECMVELAMGNSESDLKDYSF 357
           CNVAVGDATQFREHHKGEWHKHNVKRKTKNLPPLTEEECMVELAMGNSESDLKDYSF
Sbjct: 301 CNVAVGDATQFREHHKGEWHKHNVKRKTKNLPPLTEEECMVELAMGNSESDLKDYSF 357

[Close]

BLAST of MC11g1141 vs. NCBI nr
Match: XP_038886377.1 (ribosome maturation protein SBDS [Benincasa hispida])

HSP 1 Score: 665 bits (1717), Expect = 2.39e-240
Identity = 331/359 (92.20%), Postives = 345/359 (96.10%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFDTDDQTAICLKILKEGELQIAVKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAFDTDDQT ICLKILKEGELQIA KEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFDTDDQTEICLKILKEGELQIAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180
           TFNPETKRPYTISMIERLMREIHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMRIRY V
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYIV 180

Query: 181 PEQNFPSLLEKLNAWNASNLSNDQSGSQQRSVICELDPSFYRDCNPLMSELQGRFEVLSF 240
           PEQNFPSLL+KLNAW+AS +SNDQSG+QQRS+ICELDPSFYRDCNPLMSELQGRFEVLSF
Sbjct: 181 PEQNFPSLLDKLNAWSASIISNDQSGNQQRSIICELDPSFYRDCNPLMSELQGRFEVLSF 240

Query: 241 CLHEEGDTNVDQYDDDFDNGELPPRQVKES--LIPQLSEALQRQTISVEGENAPKEGKRC 300
           CLHEEGDTNVDQYDDD++N ELPPRQVKES   IPQL+EALQ+QTISV  ENA KEGKRC
Sbjct: 241 CLHEEGDTNVDQYDDDYENVELPPRQVKESESAIPQLNEALQKQTISVNSENAMKEGKRC 300

Query: 301 STCNVAVGDATQFREHHKGEWHKHNVKRKTKNLPPLTEEECMVELAMGNSESDLKDYSF 357
           STCNV VGDATQFREHHK EWHKHNVKRKTKNLPPLTEEEC VELAMG++ESDLK+YSF
Sbjct: 301 STCNVVVGDATQFREHHKSEWHKHNVKRKTKNLPPLTEEECTVELAMGDTESDLKEYSF 359

[Close]

BLAST of MC11g1141 vs. NCBI nr
Match: XP_022936066.1 (ribosome maturation protein SBDS [Cucurbita moschata] >KAG7025021.1 Ribosome maturation protein SBDS, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 658 bits (1698), Expect = 1.95e-237
Identity = 330/360 (91.67%), Postives = 343/360 (95.28%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFDTDDQTAICLKILKEGELQIAVKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAFDTDDQ  ICLKILKEGELQIA KEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFDTDDQAEICLKILKEGELQIAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180
           TFNPETKRPYTISMIERLMREIHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180

Query: 181 PEQNFPSLLEKLNAWNASNLSNDQSGSQQRSVICELDPSFYRDCNPLMSELQGRFEVLSF 240
           PEQNFPSLL+KLN+W+AS +SNDQSG+QQRSVICELDPSFYRDCNPLMSELQG+FEVLSF
Sbjct: 181 PEQNFPSLLDKLNSWSASIISNDQSGNQQRSVICELDPSFYRDCNPLMSELQGKFEVLSF 240

Query: 241 CLHEEGDTNVDQYDDD-FDNGELPPRQVKES--LIPQLSEALQRQTISVEGENAPKEGKR 300
           CLHEEGDTNVDQYDDD F+N ELPPR VKES   IPQLSEALQ+Q ISV+G N  KEGKR
Sbjct: 241 CLHEEGDTNVDQYDDDDFENVELPPRHVKESESAIPQLSEALQKQAISVDGGNTVKEGKR 300

Query: 301 CSTCNVAVGDATQFREHHKGEWHKHNVKRKTKNLPPLTEEECMVELAMGNSESDLKDYSF 357
           CSTCNV VGDA QFREHHK EWHKHNVKRKTKNLPPLTEEECMVE+AMG+SESDLK+YSF
Sbjct: 301 CSTCNVVVGDAIQFREHHKSEWHKHNVKRKTKNLPPLTEEECMVEIAMGDSESDLKEYSF 360

[Close]

BLAST of MC11g1141 vs. NCBI nr
Match: KAG6592159.1 (Ribosome maturation protein SBDS, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 658 bits (1698), Expect = 1.95e-237
Identity = 330/360 (91.67%), Postives = 343/360 (95.28%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFDTDDQTAICLKILKEGELQIAVKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAFDTDDQ  ICLKILKEGELQIA KEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFDTDDQAEICLKILKEGELQIAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180
           TFNPETKRPYTISMIERLMREIHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180

Query: 181 PEQNFPSLLEKLNAWNASNLSNDQSGSQQRSVICELDPSFYRDCNPLMSELQGRFEVLSF 240
           PEQNFPSLL+KLN+W+AS +SNDQSG+QQRSVICELDPSFYRDCNPLMSELQG+FEVLSF
Sbjct: 181 PEQNFPSLLDKLNSWSASIISNDQSGNQQRSVICELDPSFYRDCNPLMSELQGKFEVLSF 240

Query: 241 CLHEEGDTNVDQYDDD-FDNGELPPRQVK--ESLIPQLSEALQRQTISVEGENAPKEGKR 300
           CLHEEGDTNVDQYDDD F+N ELPPR VK  ES IPQLSEALQ+Q ISV+G N  KEGKR
Sbjct: 241 CLHEEGDTNVDQYDDDDFENVELPPRHVKKSESAIPQLSEALQKQAISVDGGNTVKEGKR 300

Query: 301 CSTCNVAVGDATQFREHHKGEWHKHNVKRKTKNLPPLTEEECMVELAMGNSESDLKDYSF 357
           CSTCNV VGDA QFREHHK EWHKHNVKRKTKNLPPLTEEECMVE+AMG+SESDLK+YSF
Sbjct: 301 CSTCNVVVGDAIQFREHHKSEWHKHNVKRKTKNLPPLTEEECMVEIAMGDSESDLKEYSF 360

[Close]

BLAST of MC11g1141 vs. NCBI nr
Match: XP_022975304.1 (ribosome maturation protein SBDS [Cucurbita maxima])

HSP 1 Score: 657 bits (1694), Expect = 7.94e-237
Identity = 328/360 (91.11%), Postives = 343/360 (95.28%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFDTDDQTAICLKILKEGELQIAVKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAFDTDDQ  ICLKILKEGELQIA KEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFDTDDQAEICLKILKEGELQIAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180
           TFNPETKRPYTISMIERLMREIHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180

Query: 181 PEQNFPSLLEKLNAWNASNLSNDQSGSQQRSVICELDPSFYRDCNPLMSELQGRFEVLSF 240
           PEQNFPSLL+KLN+W+AS +SNDQSG+QQRSVICELDPSFYRDCNPLMSELQG+FEVLSF
Sbjct: 181 PEQNFPSLLDKLNSWSASIISNDQSGNQQRSVICELDPSFYRDCNPLMSELQGKFEVLSF 240

Query: 241 CLHEEGDTNVDQYDDD-FDNGELPPRQVKES--LIPQLSEALQRQTISVEGENAPKEGKR 300
           CLHEEGDTNVDQYDDD F+N ELPPR VKES   IPQLSEALQ+Q ISV+G N  KEGKR
Sbjct: 241 CLHEEGDTNVDQYDDDDFENVELPPRHVKESESAIPQLSEALQKQAISVDGGNTQKEGKR 300

Query: 301 CSTCNVAVGDATQFREHHKGEWHKHNVKRKTKNLPPLTEEECMVELAMGNSESDLKDYSF 357
           CSTCNV VGDA QFREHHK EWHKHN+KRKTKNLPPLTEEECMVE+A+G+SESDLK+YSF
Sbjct: 301 CSTCNVVVGDAIQFREHHKSEWHKHNIKRKTKNLPPLTEEECMVEIAIGDSESDLKEYSF 360

[Close]

BLAST of MC11g1141 vs. ExPASy TrEMBL
Match: A0A6J1DHK8 (ribosome maturation protein SBDS OS=Momordica charantia OX=3673 GN=LOC111021162 PE=3 SV=1)

HSP 1 Score: 717 bits (1850), Expect = 5.74e-261
Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFDTDDQTAICLKILKEGELQIAVKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAFDTDDQTAICLKILKEGELQIAVKEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFDTDDQTAICLKILKEGELQIAVKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180
           TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180

Query: 181 PEQNFPSLLEKLNAWNASNLSNDQSGSQQRSVICELDPSFYRDCNPLMSELQGRFEVLSF 240
           PEQNFPSLLEKLNAWNASNLSNDQSGSQQRSVICELDPSFYRDCNPLMSELQGRFEVLSF
Sbjct: 181 PEQNFPSLLEKLNAWNASNLSNDQSGSQQRSVICELDPSFYRDCNPLMSELQGRFEVLSF 240

Query: 241 CLHEEGDTNVDQYDDDFDNGELPPRQVKESLIPQLSEALQRQTISVEGENAPKEGKRCST 300
           CLHEEGDTNVDQYDDDFDNGELPPRQVKESLIPQLSEALQRQTISVEGENAPKEGKRCST
Sbjct: 241 CLHEEGDTNVDQYDDDFDNGELPPRQVKESLIPQLSEALQRQTISVEGENAPKEGKRCST 300

Query: 301 CNVAVGDATQFREHHKGEWHKHNVKRKTKNLPPLTEEECMVELAMGNSESDLKDYSF 357
           CNVAVGDATQFREHHKGEWHKHNVKRKTKNLPPLTEEECMVELAMGNSESDLKDYSF
Sbjct: 301 CNVAVGDATQFREHHKGEWHKHNVKRKTKNLPPLTEEECMVELAMGNSESDLKDYSF 357

[Close]

BLAST of MC11g1141 vs. ExPASy TrEMBL
Match: A0A6J1F6G6 (ribosome maturation protein SBDS OS=Cucurbita moschata OX=3662 GN=LOC111442780 PE=3 SV=1)

HSP 1 Score: 658 bits (1698), Expect = 9.45e-238
Identity = 330/360 (91.67%), Postives = 343/360 (95.28%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFDTDDQTAICLKILKEGELQIAVKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAFDTDDQ  ICLKILKEGELQIA KEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFDTDDQAEICLKILKEGELQIAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180
           TFNPETKRPYTISMIERLMREIHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180

Query: 181 PEQNFPSLLEKLNAWNASNLSNDQSGSQQRSVICELDPSFYRDCNPLMSELQGRFEVLSF 240
           PEQNFPSLL+KLN+W+AS +SNDQSG+QQRSVICELDPSFYRDCNPLMSELQG+FEVLSF
Sbjct: 181 PEQNFPSLLDKLNSWSASIISNDQSGNQQRSVICELDPSFYRDCNPLMSELQGKFEVLSF 240

Query: 241 CLHEEGDTNVDQYDDD-FDNGELPPRQVKES--LIPQLSEALQRQTISVEGENAPKEGKR 300
           CLHEEGDTNVDQYDDD F+N ELPPR VKES   IPQLSEALQ+Q ISV+G N  KEGKR
Sbjct: 241 CLHEEGDTNVDQYDDDDFENVELPPRHVKESESAIPQLSEALQKQAISVDGGNTVKEGKR 300

Query: 301 CSTCNVAVGDATQFREHHKGEWHKHNVKRKTKNLPPLTEEECMVELAMGNSESDLKDYSF 357
           CSTCNV VGDA QFREHHK EWHKHNVKRKTKNLPPLTEEECMVE+AMG+SESDLK+YSF
Sbjct: 301 CSTCNVVVGDAIQFREHHKSEWHKHNVKRKTKNLPPLTEEECMVEIAMGDSESDLKEYSF 360

[Close]

BLAST of MC11g1141 vs. ExPASy TrEMBL
Match: A0A6J1IK36 (ribosome maturation protein SBDS OS=Cucurbita maxima OX=3661 GN=LOC111474460 PE=3 SV=1)

HSP 1 Score: 657 bits (1694), Expect = 3.85e-237
Identity = 328/360 (91.11%), Postives = 343/360 (95.28%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFDTDDQTAICLKILKEGELQIAVKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAFDTDDQ  ICLKILKEGELQIA KEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFDTDDQAEICLKILKEGELQIAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180
           TFNPETKRPYTISMIERLMREIHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180

Query: 181 PEQNFPSLLEKLNAWNASNLSNDQSGSQQRSVICELDPSFYRDCNPLMSELQGRFEVLSF 240
           PEQNFPSLL+KLN+W+AS +SNDQSG+QQRSVICELDPSFYRDCNPLMSELQG+FEVLSF
Sbjct: 181 PEQNFPSLLDKLNSWSASIISNDQSGNQQRSVICELDPSFYRDCNPLMSELQGKFEVLSF 240

Query: 241 CLHEEGDTNVDQYDDD-FDNGELPPRQVKES--LIPQLSEALQRQTISVEGENAPKEGKR 300
           CLHEEGDTNVDQYDDD F+N ELPPR VKES   IPQLSEALQ+Q ISV+G N  KEGKR
Sbjct: 241 CLHEEGDTNVDQYDDDDFENVELPPRHVKESESAIPQLSEALQKQAISVDGGNTQKEGKR 300

Query: 301 CSTCNVAVGDATQFREHHKGEWHKHNVKRKTKNLPPLTEEECMVELAMGNSESDLKDYSF 357
           CSTCNV VGDA QFREHHK EWHKHN+KRKTKNLPPLTEEECMVE+A+G+SESDLK+YSF
Sbjct: 301 CSTCNVVVGDAIQFREHHKSEWHKHNIKRKTKNLPPLTEEECMVEIAIGDSESDLKEYSF 360

[Close]

BLAST of MC11g1141 vs. ExPASy TrEMBL
Match: A0A5A7UXA4 (Ribosome maturation protein SBDS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00400 PE=3 SV=1)

HSP 1 Score: 653 bits (1685), Expect = 8.71e-236
Identity = 324/359 (90.25%), Postives = 343/359 (95.54%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFDTDDQTAICLKILKEGELQIAVKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAF TDDQT ICLKILKEGELQ+A KEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180
           TFNPETKRPYTISMIERLMREIHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMR+RY V
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180

Query: 181 PEQNFPSLLEKLNAWNASNLSNDQSGSQQRSVICELDPSFYRDCNPLMSELQGRFEVLSF 240
           PEQN PSLL+KLNAW+AS +SNDQSG+QQRS+ICELDPSFYRDCNPLMSEL GRFEVLSF
Sbjct: 181 PEQNVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240

Query: 241 CLHEEGDTNVDQYDDDFDNGELPPRQVKE--SLIPQLSEALQRQTISVEGENAPKEGKRC 300
           CLHEEGDTNVDQY+DD++N EL PRQ+KE  S IPQLSEALQ+QTISV  +NAPKEGKRC
Sbjct: 241 CLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC 300

Query: 301 STCNVAVGDATQFREHHKGEWHKHNVKRKTKNLPPLTEEECMVELAMGNSESDLKDYSF 357
           STCNVAVGDAT+FREHHK +WHKHNVKRKTKNLPPLTEEEC VELAMG+SESDLK+YSF
Sbjct: 301 STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 359

[Close]

BLAST of MC11g1141 vs. ExPASy TrEMBL
Match: A0A1S3CRW0 (ribosome maturation protein SBDS OS=Cucumis melo OX=3656 GN=LOC103504043 PE=3 SV=1)

HSP 1 Score: 653 bits (1685), Expect = 8.71e-236
Identity = 324/359 (90.25%), Postives = 343/359 (95.54%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MSRSLVQPIGQKRLTNVAVVRLK+HGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS
Sbjct: 1   MSRSLVQPIGQKRLTNVAVVRLKKHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60

Query: 61  NVSKGVLAKTKDLKAAFDTDDQTAICLKILKEGELQIAVKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAKTKDLKAAF TDDQT ICLKILKEGELQ+A KEREAQLSNQFRDIATIVMQK
Sbjct: 61  NVSKGVLAKTKDLKAAFGTDDQTEICLKILKEGELQVAGKEREAQLSNQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180
           TFNPETKRPYTISMIERLMREIHFA+DPNHSSKKQALEVIHELQKQFPIKRSPMR+RY V
Sbjct: 121 TFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRLRYIV 180

Query: 181 PEQNFPSLLEKLNAWNASNLSNDQSGSQQRSVICELDPSFYRDCNPLMSELQGRFEVLSF 240
           PEQN PSLL+KLNAW+AS +SNDQSG+QQRS+ICELDPSFYRDCNPLMSEL GRFEVLSF
Sbjct: 181 PEQNVPSLLDKLNAWSASIVSNDQSGNQQRSIICELDPSFYRDCNPLMSELHGRFEVLSF 240

Query: 241 CLHEEGDTNVDQYDDDFDNGELPPRQVKE--SLIPQLSEALQRQTISVEGENAPKEGKRC 300
           CLHEEGDTNVDQY+DD++N EL PRQ+KE  S IPQLSEALQ+QTISV  +NAPKEGKRC
Sbjct: 241 CLHEEGDTNVDQYEDDYENVELLPRQLKETESSIPQLSEALQKQTISVNSDNAPKEGKRC 300

Query: 301 STCNVAVGDATQFREHHKGEWHKHNVKRKTKNLPPLTEEECMVELAMGNSESDLKDYSF 357
           STCNVAVGDAT+FREHHK +WHKHNVKRKTKNLPPLTEEEC VELAMG+SESDLK+YSF
Sbjct: 301 STCNVAVGDATKFREHHKSDWHKHNVKRKTKNLPPLTEEECTVELAMGDSESDLKEYSF 359

[Close]

BLAST of MC11g1141 vs. TAIR 10
Match: AT1G43860.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 453.8 bits (1166), Expect = 1.3e-127
Identity = 229/371 (61.73%), Postives = 287/371 (77.36%), Query Frame = 0


Query: 1   MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYS 60
           MS++LVQP+GQKRLTNVAVVRLK+ G RFEIACYKNKVLSWRSGVEKD+DEVLQS  VYS
Sbjct: 1   MSKTLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYS 60

Query: 61  NVSKGVLAKTKDLKAAFDTDDQTAICLKILKEGELQIAVKEREAQLSNQFRDIATIVMQK 120
           NVSKGVLAK+KDL  +F +DD T IC+ IL++GELQ+A KERE+Q S+QFRDIATIVMQK
Sbjct: 61  NVSKGVLAKSKDLMKSFGSDDHTKICIDILEKGELQVAGKERESQFSSQFRDIATIVMQK 120

Query: 121 TFNPETKRPYTISMIERLMREIHFAIDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTV 180
           T NPET+RPYTISM+ERLM EIHFA+DP+ +SKKQAL+VI ELQK FPIKRSPMR+R TV
Sbjct: 121 TINPETQRPYTISMVERLMHEIHFAVDPHSNSKKQALDVIRELQKHFPIKRSPMRLRLTV 180

Query: 181 PEQNFPSLLEKLNAWNASNLSNDQSGSQQRSVICELDPSFYRDCNPLMSELQGRFEVLSF 240
           P QNFPSLLEKL  W+ S +S D+SG+Q  S +CE++P  +R+C+  +  +QGR E+L+ 
Sbjct: 181 PVQNFPSLLEKLKEWDGSVVSKDESGTQM-STVCEMEPGLFRECDSHVRSIQGRLEILAV 240

Query: 241 CLHEEGDTNVDQYDDDFD------NGELPPRQVKESL---IPQLSEALQRQTISV----- 300
            +H EGDT++D YD+  D         LP     + L   + +LS+ LQ+Q IS      
Sbjct: 241 SVHAEGDTSMDHYDEHDDMALQTHKPLLPAETETKDLTDPVVELSKKLQKQEISTTDNIK 300

Query: 301 EGENAPKEGKRCSTCNVAVGDATQFREHHKGEWHKHNVKRKTKNLPPLTEEECMVELAMG 358
           +     K+G +CSTCN  VG+A Q+REH K +WHKHN+KRKT+ LPP++ +ECM E+ M 
Sbjct: 301 QEGGEEKKGTKCSTCNTFVGEAKQYREHCKSDWHKHNLKRKTRKLPPISADECMSEIDMD 360

[Close]

BLAST of MC11g1141 vs. TAIR 10
Match: AT2G24500.1 (Zinc finger protein 622 )

HSP 1 Score: 43.5 bits (101), Expect = 4.1e-04
Identity = 17/42 (40.48%), Postives = 27/42 (64.29%), Query Frame = 0


Query: 295 GKRCSTCNVAVGDATQFREHHKGEWHKHNVKRKTKNLPPLTE 337
           G  C++CN    D  + + H+K EWH++N+KRK   +P +TE
Sbjct: 3   GLACNSCNKDFEDDAEQKFHYKSEWHRYNLKRKIAGVPGVTE 44

[Close]

BLAST of MC11g1141 vs. TAIR 10
Match: AT4G31420.1 (Zinc finger protein 622 )

HSP 1 Score: 43.1 bits (100), Expect = 5.4e-04
Identity = 16/42 (38.10%), Postives = 26/42 (61.90%), Query Frame = 0


Query: 295 GKRCSTCNVAVGDATQFREHHKGEWHKHNVKRKTKNLPPLTE 337
           G  C+ CN+   D  +   H+K +WH++N+KRK   +P +TE
Sbjct: 3   GLTCNACNMEFKDEEERNLHYKSDWHRYNLKRKVAGVPGVTE 44

[Close]

BLAST of MC11g1141 vs. TAIR 10
Match: AT4G31420.2 (Zinc finger protein 622 )

HSP 1 Score: 43.1 bits (100), Expect = 5.4e-04
Identity = 16/42 (38.10%), Postives = 26/42 (61.90%), Query Frame = 0


Query: 295 GKRCSTCNVAVGDATQFREHHKGEWHKHNVKRKTKNLPPLTE 337
           G  C+ CN+   D  +   H+K +WH++N+KRK   +P +TE
Sbjct: 3   GLTCNACNMEFKDEEERNLHYKSDWHRYNLKRKVAGVPGVTE 44

The following BLAST results are available for this feature:

BLAST of MC11g1141 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P70122	2.0e-64	53.85	Ribosome maturation protein SBDS OS=Mus musculus OX=10090 GN=Sbds PE=1 SV=4	[more]
Q5RK30	2.6e-64	53.04	Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1	[more]
Q3SWZ6	1.0e-63	52.63	Ribosome maturation protein SBDS OS=Bos taurus OX=9913 GN=SBDS PE=2 SV=1	[more]
Q9Y3A5	1.9e-62	51.82	Ribosome maturation protein SBDS OS=Homo sapiens OX=9606 GN=SBDS PE=1 SV=4	[more]
Q5RAZ2	1.9e-62	51.82	Ribosome maturation protein SBDS OS=Pongo abelii OX=9601 GN=SBDS PE=2 SV=1	[more]

BLAST of MC11g1141 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022153710.1	1.19e-260	100.00	ribosome maturation protein SBDS [Momordica charantia]	[more]
XP_038886377.1	2.39e-240	92.20	ribosome maturation protein SBDS [Benincasa hispida]	[more]
XP_022936066.1	1.95e-237	91.67	ribosome maturation protein SBDS [Cucurbita moschata] >KAG7025021.1 Ribosome mat...	[more]
KAG6592159.1	1.95e-237	91.67	Ribosome maturation protein SBDS, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022975304.1	7.94e-237	91.11	ribosome maturation protein SBDS [Cucurbita maxima]	[more]

BLAST of MC11g1141 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DHK8	5.74e-261	100.00	ribosome maturation protein SBDS OS=Momordica charantia OX=3673 GN=LOC111021162 ...	[more]
A0A6J1F6G6	9.45e-238	91.67	ribosome maturation protein SBDS OS=Cucurbita moschata OX=3662 GN=LOC111442780 P...	[more]
A0A6J1IK36	3.85e-237	91.11	ribosome maturation protein SBDS OS=Cucurbita maxima OX=3661 GN=LOC111474460 PE=...	[more]
A0A5A7UXA4	8.71e-236	90.25	Ribosome maturation protein SBDS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CRW0	8.71e-236	90.25	ribosome maturation protein SBDS OS=Cucumis melo OX=3656 GN=LOC103504043 PE=3 SV...	[more]

BLAST of MC11g1141 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43860.1	1.3e-127	61.73	sequence-specific DNA binding transcription factors	[more]
AT2G24500.1	4.1e-04	40.48	Zinc finger protein 622	[more]
AT4G31420.1	5.4e-04	38.10	Zinc finger protein 622	[more]
AT4G31420.2	5.4e-04	38.10	Zinc finger protein 622	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019783	Ribosome maturation protein Sdo1/SBDS, N-terminal	PFAM	PF01172	SBDS	coord: 16..102 e-value: 2.9E-27 score: 94.6
IPR018978	Ribosome maturation protein Sdo1/SBDS, C-terminal	PFAM	PF09377	SBDS_C	coord: 110..225 e-value: 4.4E-28 score: 97.5
IPR002140	Ribosome maturation protein Sdo1/SBDS	TIGRFAM	TIGR00291	TIGR00291	coord: 13..231 e-value: 3.2E-50 score: 168.6
IPR036786	Ribosome maturation protein SBDS, N-terminal domain superfamily	GENE3D	3.30.1250.10		coord: 1..96 e-value: 4.1E-38 score: 131.3
IPR036786	Ribosome maturation protein SBDS, N-terminal domain superfamily	SUPERFAMILY	89895	FYSH domain	coord: 13..96
None	No IPR available	GENE3D	3.30.70.240		coord: 174..251 e-value: 3.1E-11 score: 45.1
None	No IPR available	PANTHER	PTHR10927:SF3	BNAANNG06530D PROTEIN	coord: 1..357
IPR037188	Ribosome maturation protein Sdo1/SBDS, central domain superfamily	GENE3D	1.10.10.900		coord: 100..172 e-value: 1.4E-29 score: 103.9
IPR037188	Ribosome maturation protein Sdo1/SBDS, central domain superfamily	SUPERFAMILY	109728	Hypothetical protein AF0491, middle domain	coord: 99..171
IPR039100	Ribosome maturation protein Sdo1/SBDS-like	PANTHER	PTHR10927	RIBOSOME MATURATION PROTEIN SBDS	coord: 1..357
IPR018023	Ribosome maturation protein SBDS, conserved site	PROSITE	PS01267	UPF0023	coord: 46..65
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 298..320
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 287..327

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g1141.1	MC11g1141.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042256	mature ribosome assembly
biological_process	GO:0042254	ribosome biogenesis
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding