MC11g1099 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g1099
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	DNA replication complex GINS protein PSF1-like
Location	MC11: 9407021 .. 9409493 (+)
RNA-Seq Expression	MC11g1099
Synteny	MC11g1099

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATGGAAGAAAAGCATGCCAGTTGGTGAAAGAGCTAGCAAACGGCGAGAAAGGTCAGCTAACGCACTTCAATGTAAGTCCACATGCTTGTTTTTGTATATGTTTATTGTTTACCTACTGAGGTTGTATTGTATTGGATATCGAGTTTTGTCCTTGCAATTTCGTTTCCATCTTGAAGATTGCATCTATTTGCATTATTAGGAGATCTAGAAGGGCTAATTTTATAGTTGATGAAATGTTTTGCACTTGGTTCTTTCGGATGATTTAGTCACTCGACAAATCGTTTACTTTGATAAATAAGCCTAAATTTTCAAATTCATTTCACAGAATGTATTTTGCTTGTTTTTTTTTTTCACCACTTCCAGGTTTGTGTGAAGTGATTATTTTACACTTGGAACAAATTGATCAAACAGTAGAGGCGTGCATTGTCGACTTTTTAATATAAAAAATATACACTCTTATAAACTAGCTTGTTTTTTATTGGATGCTTAAGCACTTTCAGTAAGTAGATGTCTTGAAAAGAAATTATGGTGGCTTAAATCACATTGTTCAATGTCTCGGTGTCCAGCTTTTTAACTGTTTTCTATAGTAAATTCAGATTACATCTAATATTTTGAAATTTTTTGTTTTTTCCCTGTGTTTCTTCAGAGCGACCTATTTGATCAGGTTATTTCAGAATGCGAGCAGCATCATCTTGAGCTTCAGTCCTTGATGAGGTTATAATGTTCTACCTTTTTATTAACATATTTCATTCCTTGATATGATATTTAGTTTTAAGTGAAAACTGATCTGTTTCCGGATGGTTATTAGTCTGTTTGGTATGAAAAGAAGGTAGTCAAATTGCTTCTAAGAGCATGCTCATTTGGTTTTTAATAGTTCATCAATCTTGAGAAATGACAGAGGTTCATATTTTCATGAGAGTAGTGGTTTTATCACGGTTAATGTTGATGGTCTCGTATGGGGGCCACCTAGTGAATACTATCGACTGACATTTCTTTTATCCAATTTCCGTCCAATCTGCCCTCCATTCCATTATATGGTATGAAAGACTTTAAGAGCAGAAGTCAACTCAAGGCTCCATTTATTGACAGTAGCACTTGGGACCTTCTTTATCCTAGGAACTATCCCAGTAAGTTCACTGCAGTCATGAACTTACTACTGTATATTCTTGACTCATTGCATTGTCACTCCCAGATTGAACTGTCACATGTAGAAAGGAATGTACTCATGGATGACACAAGACATTTGCTATCTCTTTAGTAACAGTTGCATCTAATCAAATTGGAAGGTTAACCCAAAGGCTACCTCTTGTTATGCCACGTAAAACAAATAACCAAATGCTGAAAGCTTACCAGTCATGTAATCACTGGCTCTGGTTGTAAGAGCGCCTAAACCAATGAATTCTAAAACCAGCAATTCTCCATTCTAATAACTCTTGAATTTATGTAAGTGAGCAAAGAGAAATAGTGGCACTTGTATGCGTTTAAGTACTTGTCTAGAACCATTGGCTATCTAAATTAAAAGACAGTATTTCAGGATGACTCATTGTAGTTGATATGATGATCTGGAACAGGAAAATACAGGAAGAAGGGTTGGATCTACAGACTACTAAGAATGAAGATCACTTTGGTGCGCTCATTCACCACCTTTCACTAGTTCGCAATAAACGATGCCTTATGGCTTATGTGTAAGTCTAATATTGTGACATTGGCTTTTATCCGGTTTTCTGGGTTCGAGATAATTATATTTGCCAATTAAATGTCTTTATATATAAACAAGCAGGTATAATCGAGCTGAGATTATAAGAAGTTTGATATGGAAGGTAGGATCTATGCTTCCACCAGAAATACAAGAGAAGCTTAGCAACTCAGAGGAAGAGTATTTTAAGAAGCATTCTGCACGTCTAAAAGTATACATGTCGAGACTGGAGTTGGAATTGACTGTGGTAATCTCTGACACCATTTTTATATATAATCTTTTCCTTCTAAAAATTTAGGGAGCAAATTAAAGAGAAATCTTTTAACTTTTAGTGTAATTTTCTTTAAAAGAATTAAGGCGAATGAAGGTGTAATTTACCCTCCTTCATTCTTGGCTTTTTGCCCGTTCCAGGGAGACTGCGAGTTTGATTCTTTCACTCCTTTTCTATATATAATAAGAATAGATGATTTAAAGCACTTGGTGGAAAATCATAAACCAATTTGAAACCATAACGCTTTAAGAACTCAAATTCCTGGAACTGAAATTTCCAAGTTTATCACTGGCAGGATATGGTGCCACCCAAGGATCCATATATCCAAGTGAGGGTACTCGATGATATCGGTGAAGGAATCATACTCAGTGATGATAAAACAGCAAACTTTGCACGTCATTCTATACATTTTCTTAAACGAACTGATGCTGAGCAATTCATTTCACGGGTGAGAATCCCTCCACTCCAAATTTCGTTTCGCAATTCTTATTATTGCTTGCTT

mRNA sequence

ATGTATGGAAGAAAAGCATGCCAGTTGGTGAAAGAGCTAGCAAACGGCGAGAAAGGTCAGCTAACGCACTTCAATAGCGACCTATTTGATCAGGTTATTTCAGAATGCGAGCAGCATCATCTTGAGCTTCAGTCCTTGATGAGGAAAATACAGGAAGAAGGGTTGGATCTACAGACTACTAAGAATGAAGATCACTTTGGTGCGCTCATTCACCACCTTTCACTAGTTCGCAATAAACGATGCCTTATGGCTTATGTGTATAATCGAGCTGAGATTATAAGAAGTTTGATATGGAAGGTAGGATCTATGCTTCCACCAGAAATACAAGAGAAGCTTAGCAACTCAGAGGAAGAGTATTTTAAGAAGCATTCTGCACGTCTAAAAGTATACATGTCGAGACTGGAGTTGGAATTGACTGTGGATATGGTGCCACCCAAGGATCCATATATCCAAGTGAGGGTACTCGATGATATCGGTGAAGGAATCATACTCAGTGATGATAAAACAGCAAACTTTGCACGTCATTCTATACATTTTCTTAAACGAACTGATGCTGAGCAATTCATTTCACGGGTGAGAATCCCTCCACTCCAAATTTCGTTTCGCAATTCTTATTATTGCTTGCTT

Coding sequence (CDS)

ATGTATGGAAGAAAAGCATGCCAGTTGGTGAAAGAGCTAGCAAACGGCGAGAAAGGTCAGCTAACGCACTTCAATAGCGACCTATTTGATCAGGTTATTTCAGAATGCGAGCAGCATCATCTTGAGCTTCAGTCCTTGATGAGGAAAATACAGGAAGAAGGGTTGGATCTACAGACTACTAAGAATGAAGATCACTTTGGTGCGCTCATTCACCACCTTTCACTAGTTCGCAATAAACGATGCCTTATGGCTTATGTGTATAATCGAGCTGAGATTATAAGAAGTTTGATATGGAAGGTAGGATCTATGCTTCCACCAGAAATACAAGAGAAGCTTAGCAACTCAGAGGAAGAGTATTTTAAGAAGCATTCTGCACGTCTAAAAGTATACATGTCGAGACTGGAGTTGGAATTGACTGTGGATATGGTGCCACCCAAGGATCCATATATCCAAGTGAGGGTACTCGATGATATCGGTGAAGGAATCATACTCAGTGATGATAAAACAGCAAACTTTGCACGTCATTCTATACATTTTCTTAAACGAACTGATGCTGAGCAATTCATTTCACGGGTGAGAATCCCTCCACTCCAAATTTCGTTTCGCAATTCTTATTATTGCTTGCTT

Protein sequence

MYGRKACQLVKELANGEKGQLTHFNSDLFDQVISECEQHHLELQSLMRKIQEEGLDLQTTKNEDHFGALIHHLSLVRNKRCLMAYVYNRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYFKKHSARLKVYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFLKRTDAEQFISRVRIPPLQISFRNSYYCLL

Homology

[Close]

BLAST of MC11g1099 vs. ExPASy Swiss-Prot
Match: Q7ZT47 (DNA replication complex GINS protein PSF1 OS=Xenopus laevis OX=8355 GN=gins1 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 3.0e-23
Identity = 70/194 (36.08%), Postives = 105/194 (54.12%), Query Frame = 0


Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQVISECEQHHLELQSLMRKIQEEG-LDLQT 60
           M+  KA +L++EL     GQL  FN D   Q++ E +  + + Q+ + + + EG  DL  
Sbjct: 1   MFCEKAIELIRELQRASDGQLPAFNEDGIRQILEEMKALYEQNQADVNEAKTEGRSDLIP 60

Query: 61  TKNEDHFGALIHHLSLVRNKRCLMAYVYNRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEY 120
           T           H  L+RN+RC++AY+Y+R   IR+L W+ GS+LP  ++  +S  E ++
Sbjct: 61  T-------IKFRHCCLLRNRRCIVAYLYDRLLRIRALRWEYGSVLPSALRFHMSTEEMDW 120

Query: 121 FKKHSARLKVYMSRL----ELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARH 180
           F ++   L  YM  L     L++T DM PPK  YI+VR L D GE   + D  T    ++
Sbjct: 121 FNQYKRSLATYMRSLGGEEGLDITQDMKPPKSLYIEVRCLRDYGE-FEIDDGTTILLKKN 180

Query: 181 SIHFLKRTDAEQFI 190
           S HFL R   EQ I
Sbjct: 181 SQHFLPRWKCEQLI 186

[Close]

BLAST of MC11g1099 vs. ExPASy Swiss-Prot
Match: A4IFH4 (DNA replication complex GINS protein PSF1 OS=Bos taurus OX=9913 GN=GINS1 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.5e-22
Identity = 71/194 (36.60%), Postives = 105/194 (54.12%), Query Frame = 0


Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQVISECEQHHLELQSLMRKIQEEGL-DLQT 60
           M+  KA +LV+EL    +G+L  FN D   QV+ E +  + + QS + + +  G  DL  
Sbjct: 1   MFCEKAMELVRELHRAAEGRLPAFNEDGLRQVLEEMKALYEQNQSDVNEAKSSGRGDLIP 60

Query: 61  TKNEDHFGALIHHLSLVRNKRCLMAYVYNRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEY 120
           T           H SL+RN+RC +AY+Y+R   IR+L W+ GS+LP  ++  +S  E ++
Sbjct: 61  T-------IKFRHCSLLRNQRCTVAYLYDRLLRIRALRWEYGSVLPSALRFHMSAEEMDW 120

Query: 121 FKKHSARLKVYMSRL----ELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARH 180
           F ++   L  YM  L     L++T DM PPK  YI+VR L D GE   + D  +    ++
Sbjct: 121 FNRYKKSLATYMRSLGGDEGLDITQDMKPPKSLYIEVRCLKDYGE-FEVEDGTSVLLKKN 180

Query: 181 SIHFLKRTDAEQFI 190
           S HFL R   EQ I
Sbjct: 181 SQHFLPRWKCEQLI 186

[Close]

BLAST of MC11g1099 vs. ExPASy Swiss-Prot
Match: Q14691 (DNA replication complex GINS protein PSF1 OS=Homo sapiens OX=9606 GN=GINS1 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.9e-22
Identity = 71/194 (36.60%), Postives = 104/194 (53.61%), Query Frame = 0


Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQVISECEQHHLELQSLMRKIQEEG-LDLQT 60
           M+  KA +L++EL    +GQL  FN D   QV+ E +  + + QS + + +  G  DL  
Sbjct: 1   MFCEKAMELIRELHRAPEGQLPAFNEDGLRQVLEEMKALYEQNQSDVNEAKSGGRSDLIP 60

Query: 61  TKNEDHFGALIHHLSLVRNKRCLMAYVYNRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEY 120
           T           H SL+RN+RC +AY+Y+R   IR+L W+ GS+LP  ++  ++  E E+
Sbjct: 61  T-------IKFRHCSLLRNRRCTVAYLYDRLLRIRALRWEYGSVLPNALRFHMAAEEMEW 120

Query: 121 FKKHSARLKVYMSRL----ELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARH 180
           F  +   L  YM  L     L++T DM PPK  YI+VR L D GE   + D  +    ++
Sbjct: 121 FNNYKRSLATYMRSLGGDEGLDITQDMKPPKSLYIEVRCLKDYGE-FEVDDGTSVLLKKN 180

Query: 181 SIHFLKRTDAEQFI 190
           S HFL R   EQ I
Sbjct: 181 SQHFLPRWKCEQLI 186

[Close]

BLAST of MC11g1099 vs. ExPASy Swiss-Prot
Match: Q9CZ15 (DNA replication complex GINS protein PSF1 OS=Mus musculus OX=10090 GN=Gins1 PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.9e-22
Identity = 71/194 (36.60%), Postives = 104/194 (53.61%), Query Frame = 0


Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQVISECEQHHLELQSLMRKIQEEGL-DLQT 60
           M+  KA +LV+EL    +GQL  FN D   QV+ E +  + + QS + + +  G  DL  
Sbjct: 1   MFCEKAMELVRELHRAPEGQLPAFNEDGLRQVLEEMKALYEQNQSDVNEAKSAGRGDLIP 60

Query: 61  TKNEDHFGALIHHLSLVRNKRCLMAYVYNRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEY 120
           T           H +L+RN+RC +AY+Y+R   IR+L W+ GS+LP  ++  +S  E E+
Sbjct: 61  T-------VKFRHCALLRNRRCTIAYLYDRLLRIRALRWEYGSVLPNSLRFHMSAEETEW 120

Query: 121 FKKHSARLKVYMSRL----ELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARH 180
           F  +   L  YM  L     L++T D+ PPK  YI+VR L D GE   + D  +    ++
Sbjct: 121 FNHYKKSLATYMRSLGGDEGLDITQDVKPPKSLYIEVRCLKDYGE-FEVDDGTSVLLKKN 180

Query: 181 SIHFLKRTDAEQFI 190
           S HFL R   EQ I
Sbjct: 181 SQHFLPRWKCEQLI 186

[Close]

BLAST of MC11g1099 vs. ExPASy Swiss-Prot
Match: Q54HR6 (Probable DNA replication complex GINS protein PSF1 OS=Dictyostelium discoideum OX=44689 GN=gins1 PE=3 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-20
Identity = 61/192 (31.77%), Postives = 108/192 (56.25%), Query Frame = 0


Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQVISECEQHHLELQSLMRKIQEEGLDLQTT 60
           M+ + A +L+KEL   +   + H+N       I E    + +L   + + +E+       
Sbjct: 1   MFTKTAIELIKELRGTD--SIPHYNDTSIKATIDEMIALYEDLIKTITEHKEQ------- 60

Query: 61  KNEDHF--GALIHHLSLVRNKRCLMAYVYNRAEIIRSLIWKVG-SMLPPEIQEKLSNSEE 120
           K E  +   A+  H S+ R+KRC++AY+  R   I+   W  G S+LP +++E+LS +E 
Sbjct: 61  KKEPFYLQHAITFHNSINRDKRCILAYLNERLNRIKEYRWSSGQSLLPDQLKERLSQNEI 120

Query: 121 EYFKKHSARLKVYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSI 180
           ++F ++   L  Y S++ L+LT+D  PPK+ YI+VRV+ ++GE ++L+   T N   ++ 
Sbjct: 121 QFFSEYDKILTEYNSKVGLDLTIDPQPPKELYIEVRVIKELGE-VVLNSGCTVNLNLNTT 180

Query: 181 HFLKRTDAEQFI 190
           HFLKR+D    +
Sbjct: 181 HFLKRSDITNLV 182

[Close]

BLAST of MC11g1099 vs. NCBI nr
Match: XP_022139358.1 (DNA replication complex GINS protein PSF1-like [Momordica charantia])

HSP 1 Score: 384 bits (986), Expect = 4.56e-134
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQVISECEQHHLELQSLMRKIQEEGLDLQTT 60
           MYGRKACQLVKELANGEKGQLTHFNSDLFDQVISECEQHHLELQSLMRKIQEEGLDLQTT
Sbjct: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQVISECEQHHLELQSLMRKIQEEGLDLQTT 60

Query: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYNRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYF 120
           KNEDHFGALIHHLSLVRNKRCLMAYVYNRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYF
Sbjct: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYNRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYF 120

Query: 121 KKHSARLKVYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFL 180
           KKHSARLKVYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFL
Sbjct: 121 KKHSARLKVYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFL 180

Query: 181 KRTDAEQFISR 191
           KRTDAEQFISR
Sbjct: 181 KRTDAEQFISR 191

[Close]

BLAST of MC11g1099 vs. NCBI nr
Match: XP_022144990.1 (DNA replication complex GINS protein PSF1-like isoform X2 [Momordica charantia])

HSP 1 Score: 376 bits (965), Expect = 7.25e-131
Identity = 187/191 (97.91%), Postives = 188/191 (98.43%), Query Frame = 0


Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQVISECEQHHLELQSLMRKIQEEGLDLQTT 60
           MYGRKACQLVKELANGEKGQLTHFNSDLFDQ ISECEQHHLELQSLMRKIQEEGLDLQTT
Sbjct: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGLDLQTT 60

Query: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYNRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYF 120
           KNEDHFGALIHHLSLVRNKRCLMAYVY+RAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYF
Sbjct: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYDRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYF 120

Query: 121 KKHSARLKVYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFL 180
           KKHSA LK YMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFL
Sbjct: 121 KKHSACLKAYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFL 180

Query: 181 KRTDAEQFISR 191
           KRTDAEQFISR
Sbjct: 181 KRTDAEQFISR 191

[Close]

BLAST of MC11g1099 vs. NCBI nr
Match: XP_022144973.1 (DNA replication complex GINS protein PSF1-like isoform X1 [Momordica charantia])

HSP 1 Score: 371 bits (953), Expect = 5.07e-129
Identity = 187/192 (97.40%), Postives = 188/192 (97.92%), Query Frame = 0


Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQVISECEQHHLELQSLMRKIQEEGLDLQTT 60
           MYGRKACQLVKELANGEKGQLTHFNSDLFDQ ISECEQHHLELQSLMRKIQEEGLDLQTT
Sbjct: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGLDLQTT 60

Query: 61  KNEDHFGALIHHLSLVRNKRCLMAYV-YNRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEY 120
           KNEDHFGALIHHLSLVRNKRCLMAYV Y+RAEIIRSLIWKVGSMLPPEIQEKLSNSEEEY
Sbjct: 61  KNEDHFGALIHHLSLVRNKRCLMAYVRYDRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEY 120

Query: 121 FKKHSARLKVYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHF 180
           FKKHSA LK YMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHF
Sbjct: 121 FKKHSACLKAYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHF 180

Query: 181 LKRTDAEQFISR 191
           LKRTDAEQFISR
Sbjct: 181 LKRTDAEQFISR 192

[Close]

BLAST of MC11g1099 vs. NCBI nr
Match: XP_004135842.1 (probable DNA replication complex GINS protein PSF1 [Cucumis sativus] >KGN45289.1 hypothetical protein Csa_016815 [Cucumis sativus])

HSP 1 Score: 359 bits (921), Expect = 3.82e-124
Identity = 176/192 (91.67%), Postives = 189/192 (98.44%), Query Frame = 0


Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQVISECEQHHLELQSLMRKIQEEGLDLQTT 60
           MYGRKACQLVKELA+GEKGQLTHFNSDLF+QVISEC+QHHLELQSL+RK+QEEGLDLQTT
Sbjct: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60

Query: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYNRAEIIRSLIWKV-GSMLPPEIQEKLSNSEEEY 120
           KNEDHFGALIHHL+LVRNKRCLMAYV+NRAEIIRSL+WKV GSM+PPEIQEKLSNSEEEY
Sbjct: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEY 120

Query: 121 FKKHSARLKVYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHF 180
           FKKHSARLK YMS+LEL+LTVDMVPPKDPYIQVRVLDDIGEGI+LSDDKTANFA HSIHF
Sbjct: 121 FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180

Query: 181 LKRTDAEQFISR 191
           LKRTDAEQ+ISR
Sbjct: 181 LKRTDAEQYISR 192

[Close]

BLAST of MC11g1099 vs. NCBI nr
Match: XP_038897311.1 (probable DNA replication complex GINS protein PSF1 [Benincasa hispida])

HSP 1 Score: 357 bits (917), Expect = 1.56e-123
Identity = 175/192 (91.15%), Postives = 188/192 (97.92%), Query Frame = 0


Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQVISECEQHHLELQSLMRKIQEEGLDLQTT 60
           MYGRKACQLVKEL +GEKGQLTHFNSDLF+QVISEC+QHHLELQSL+RK+QEEGLDLQTT
Sbjct: 1   MYGRKACQLVKELTSGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60

Query: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYNRAEIIRSLIWK-VGSMLPPEIQEKLSNSEEEY 120
           KNEDHFGALIHHL+LVRNKRCLMAYV+NRAEIIRSLIWK VGSM+PPEIQEKLSNSEEEY
Sbjct: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLIWKIVGSMIPPEIQEKLSNSEEEY 120

Query: 121 FKKHSARLKVYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHF 180
           FKKHSAR+K YMS+LEL+LTVDMVPPKDPYIQVRVLDDIGEGI+LSDDKTANFA HSIHF
Sbjct: 121 FKKHSARVKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180

Query: 181 LKRTDAEQFISR 191
           LKRTDAEQ+ISR
Sbjct: 181 LKRTDAEQYISR 192

[Close]

BLAST of MC11g1099 vs. ExPASy TrEMBL
Match: A0A6J1CFF5 (DNA replication complex GINS protein PSF1-like OS=Momordica charantia OX=3673 GN=LOC111010311 PE=3 SV=1)

HSP 1 Score: 384 bits (986), Expect = 2.21e-134
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQVISECEQHHLELQSLMRKIQEEGLDLQTT 60
           MYGRKACQLVKELANGEKGQLTHFNSDLFDQVISECEQHHLELQSLMRKIQEEGLDLQTT
Sbjct: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQVISECEQHHLELQSLMRKIQEEGLDLQTT 60

Query: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYNRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYF 120
           KNEDHFGALIHHLSLVRNKRCLMAYVYNRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYF
Sbjct: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYNRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYF 120

Query: 121 KKHSARLKVYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFL 180
           KKHSARLKVYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFL
Sbjct: 121 KKHSARLKVYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFL 180

Query: 181 KRTDAEQFISR 191
           KRTDAEQFISR
Sbjct: 181 KRTDAEQFISR 191

[Close]

BLAST of MC11g1099 vs. ExPASy TrEMBL
Match: A0A6J1CT73 (DNA replication complex GINS protein PSF1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014510 PE=3 SV=1)

HSP 1 Score: 376 bits (965), Expect = 3.51e-131
Identity = 187/191 (97.91%), Postives = 188/191 (98.43%), Query Frame = 0


Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQVISECEQHHLELQSLMRKIQEEGLDLQTT 60
           MYGRKACQLVKELANGEKGQLTHFNSDLFDQ ISECEQHHLELQSLMRKIQEEGLDLQTT
Sbjct: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGLDLQTT 60

Query: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYNRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYF 120
           KNEDHFGALIHHLSLVRNKRCLMAYVY+RAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYF
Sbjct: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYDRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEYF 120

Query: 121 KKHSARLKVYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFL 180
           KKHSA LK YMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFL
Sbjct: 121 KKHSACLKAYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHFL 180

Query: 181 KRTDAEQFISR 191
           KRTDAEQFISR
Sbjct: 181 KRTDAEQFISR 191

[Close]

BLAST of MC11g1099 vs. ExPASy TrEMBL
Match: A0A6J1CUP5 (DNA replication complex GINS protein PSF1-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014510 PE=3 SV=1)

HSP 1 Score: 371 bits (953), Expect = 2.45e-129
Identity = 187/192 (97.40%), Postives = 188/192 (97.92%), Query Frame = 0


Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQVISECEQHHLELQSLMRKIQEEGLDLQTT 60
           MYGRKACQLVKELANGEKGQLTHFNSDLFDQ ISECEQHHLELQSLMRKIQEEGLDLQTT
Sbjct: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQAISECEQHHLELQSLMRKIQEEGLDLQTT 60

Query: 61  KNEDHFGALIHHLSLVRNKRCLMAYV-YNRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEY 120
           KNEDHFGALIHHLSLVRNKRCLMAYV Y+RAEIIRSLIWKVGSMLPPEIQEKLSNSEEEY
Sbjct: 61  KNEDHFGALIHHLSLVRNKRCLMAYVRYDRAEIIRSLIWKVGSMLPPEIQEKLSNSEEEY 120

Query: 121 FKKHSARLKVYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHF 180
           FKKHSA LK YMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHF
Sbjct: 121 FKKHSACLKAYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHF 180

Query: 181 LKRTDAEQFISR 191
           LKRTDAEQFISR
Sbjct: 181 LKRTDAEQFISR 192

[Close]

BLAST of MC11g1099 vs. ExPASy TrEMBL
Match: A0A0A0K8U8 (Sld5 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G433190 PE=3 SV=1)

HSP 1 Score: 359 bits (921), Expect = 1.85e-124
Identity = 176/192 (91.67%), Postives = 189/192 (98.44%), Query Frame = 0


Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQVISECEQHHLELQSLMRKIQEEGLDLQTT 60
           MYGRKACQLVKELA+GEKGQLTHFNSDLF+QVISEC+QHHLELQSL+RK+QEEGLDLQTT
Sbjct: 1   MYGRKACQLVKELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60

Query: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYNRAEIIRSLIWKV-GSMLPPEIQEKLSNSEEEY 120
           KNEDHFGALIHHL+LVRNKRCLMAYV+NRAEIIRSL+WKV GSM+PPEIQEKLSNSEEEY
Sbjct: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAEIIRSLMWKVVGSMIPPEIQEKLSNSEEEY 120

Query: 121 FKKHSARLKVYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHF 180
           FKKHSARLK YMS+LEL+LTVDMVPPKDPYIQVRVLDDIGEGI+LSDDKTANFA HSIHF
Sbjct: 121 FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180

Query: 181 LKRTDAEQFISR 191
           LKRTDAEQ+ISR
Sbjct: 181 LKRTDAEQYISR 192

[Close]

BLAST of MC11g1099 vs. ExPASy TrEMBL
Match: A0A1S3CDY2 (probable DNA replication complex GINS protein PSF1 OS=Cucumis melo OX=3656 GN=LOC103499784 PE=3 SV=1)

HSP 1 Score: 355 bits (910), Expect = 8.79e-123
Identity = 174/192 (90.62%), Postives = 187/192 (97.40%), Query Frame = 0


Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQVISECEQHHLELQSLMRKIQEEGLDLQTT 60
           MYGRKACQLV ELA+GEKGQLTHFNSDLF+QVISEC+QHHLELQSL+RK+QEEGLDLQTT
Sbjct: 1   MYGRKACQLVTELASGEKGQLTHFNSDLFEQVISECQQHHLELQSLIRKVQEEGLDLQTT 60

Query: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYNRAEIIRSLIWKV-GSMLPPEIQEKLSNSEEEY 120
           KNEDHFGALIHHL+LVRNKRCLMAYV+NRAE IRSLIWK+ GSM+PPEIQEKLSNSEEEY
Sbjct: 61  KNEDHFGALIHHLALVRNKRCLMAYVHNRAETIRSLIWKLLGSMIPPEIQEKLSNSEEEY 120

Query: 121 FKKHSARLKVYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSIHF 180
           FKKHSARLK YMS+LEL+LTVDMVPPKDPYIQVRVLDDIGEGI+LSDDKTANFA HSIHF
Sbjct: 121 FKKHSARLKEYMSKLELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFALHSIHF 180

Query: 181 LKRTDAEQFISR 191
           LKRTDAEQ+ISR
Sbjct: 181 LKRTDAEQYISR 192

[Close]

BLAST of MC11g1099 vs. TAIR 10
Match: AT1G80190.1 (partner of SLD five 1 )

HSP 1 Score: 272.7 bits (696), Expect = 2.4e-73
Identity = 133/200 (66.50%), Postives = 162/200 (81.00%), Query Frame = 0


Query: 1   MYGRKACQLVKELANGEKGQLTHFNSDLFDQVISECEQHHLELQSLMRKIQEEGLDLQTT 60
           MYGRK  QL+K+ A GEKGQL  FNS LFD+ I EC+Q+H  +QSL+RK+Q+EGLD+Q  
Sbjct: 1   MYGRKGYQLIKDFATGEKGQLKPFNSKLFDETIEECDQNHHLIQSLIRKMQQEGLDVQNN 60

Query: 61  KNEDHFGALIHHLSLVRNKRCLMAYVYNRAEIIRSLIWKVGSM---LPPEIQEKLSNSEE 120
           +N DH+GALIHHL+L+RNKRCLMAYVYNRAEI+R L W+VG     LP EIQEKL+  E+
Sbjct: 61  RNADHYGALIHHLALIRNKRCLMAYVYNRAEIVRDLAWRVGLELLDLPSEIQEKLTTLEK 120

Query: 121 EYFKKHSARLKVYMSRLELELTVDMVPPKDPYIQVRVLDDIGEGIILSDDKTANFARHSI 180
           EYFK HS  LK YM ++ +EL VDMVPPKDPYI+VR+LDDI EGI+LS DKT NFARHS+
Sbjct: 121 EYFKNHSVALKSYMGKVGIELNVDMVPPKDPYIKVRILDDIDEGIVLS-DKTTNFARHSM 180

Query: 181 HFLKRTDAEQFISRVRIPPL 198
           HFLKRTDAE +I+R ++  L
Sbjct: 181 HFLKRTDAEPYIARGQMEEL 199

The following BLAST results are available for this feature:

BLAST of MC11g1099 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7ZT47	3.0e-23	36.08	DNA replication complex GINS protein PSF1 OS=Xenopus laevis OX=8355 GN=gins1 PE=...	[more]
A4IFH4	1.5e-22	36.60	DNA replication complex GINS protein PSF1 OS=Bos taurus OX=9913 GN=GINS1 PE=2 SV...	[more]
Q14691	1.9e-22	36.60	DNA replication complex GINS protein PSF1 OS=Homo sapiens OX=9606 GN=GINS1 PE=1 ...	[more]
Q9CZ15	1.9e-22	36.60	DNA replication complex GINS protein PSF1 OS=Mus musculus OX=10090 GN=Gins1 PE=1...	[more]
Q54HR6	1.4e-20	31.77	Probable DNA replication complex GINS protein PSF1 OS=Dictyostelium discoideum O...	[more]

BLAST of MC11g1099 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139358.1	4.56e-134	100.00	DNA replication complex GINS protein PSF1-like [Momordica charantia]	[more]
XP_022144990.1	7.25e-131	97.91	DNA replication complex GINS protein PSF1-like isoform X2 [Momordica charantia]	[more]
XP_022144973.1	5.07e-129	97.40	DNA replication complex GINS protein PSF1-like isoform X1 [Momordica charantia]	[more]
XP_004135842.1	3.82e-124	91.67	probable DNA replication complex GINS protein PSF1 [Cucumis sativus] >KGN45289.1...	[more]
XP_038897311.1	1.56e-123	91.15	probable DNA replication complex GINS protein PSF1 [Benincasa hispida]	[more]

BLAST of MC11g1099 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CFF5	2.21e-134	100.00	DNA replication complex GINS protein PSF1-like OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1CT73	3.51e-131	97.91	DNA replication complex GINS protein PSF1-like isoform X2 OS=Momordica charantia...	[more]
A0A6J1CUP5	2.45e-129	97.40	DNA replication complex GINS protein PSF1-like isoform X1 OS=Momordica charantia...	[more]
A0A0A0K8U8	1.85e-124	91.67	Sld5 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G433190 PE=3 S...	[more]
A0A1S3CDY2	8.79e-123	90.63	probable DNA replication complex GINS protein PSF1 OS=Cucumis melo OX=3656 GN=LO...	[more]

BLAST of MC11g1099 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80190.1	2.4e-73	66.50	partner of SLD five 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 33..63
None	No IPR available	GENE3D	1.20.58.1030		coord: 1..134 e-value: 2.4E-40 score: 139.7
IPR021151	GINS subunit, domain A	PFAM	PF05916	Sld5	coord: 47..116 e-value: 5.4E-7 score: 30.0
IPR005339	GINS complex, subunit Psf1	PANTHER	PTHR12914	PARTNER OF SLD5	coord: 1..192
IPR005339	GINS complex, subunit Psf1	CDD	cd11710	GINS_A_psf1	coord: 3..136 e-value: 5.36293E-47 score: 149.328
IPR036224	GINS, helical bundle-like domain superfamily	SUPERFAMILY	158573	GINS helical bundle-like	coord: 1..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g1099.1	MC11g1099.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902983	DNA strand elongation involved in mitotic DNA replication
biological_process	GO:0006260	DNA replication
cellular_component	GO:0000811	GINS complex