MC11g1025 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC11g1025
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description30S ribosomal protein S10
LocationMC11: 8776563 .. 8779773 (+)
RNA-Seq ExpressionMC11g1025
SyntenyMC11g1025
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptideutr3
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGCTTCCGCCATCGATAACCAGAGCAAGTTCAATGGCTATTTCTTCTCTCTCTGCCTCCATAATTCCATCTCCTACTCTATTGGGTCCTTTGTCATCTCTTTCTTCTAAACCTAGACTTCTTCCCTTCTCTGGTTCCTCTTCTACTGCTCTGAAGCTCAAACCCCTTCAATTTTCATCGTCTTCGACAAGGGTTTATGCCGCTCCTGAAGTTCTCGACTCCTCGGATACCATCGAACCGCCTCCGGAAATCCTGGAGGGCTCTGGAGCTTCCACTCTCGAGGTTTGTGACAATGTTGTTCGGCTAGAATTGTAGTTTGGAAGGGGAGCAAAAAGTAACAATTTCTTTTTACATTCTAGAAGGTGTAACAACGTTCTAAAAGGTTGTAATGGTTCTGGGTTTTGTACATTTTCTTTTCCTTTTTGGGAATTGTGGGTCGGAATCAGGATGTGATAGACTAATGTTTCAATTGATAGACTAATGGATCTATTTTTAATTGAAAATATAATGGATTAGATGTTGCTCCCATTTTTGTTTTATGGTATGTTCATGTTCATGTGTAGGGTGAAGAATATGAGACGCCTGGGACTTCAGCGCTTAGCATTGGTGAAGATGTGGACAGGGTAATTTTTATGTTTTACTCCAGCATCTTGTAGCTTACTAAAGATATAAAATGGTCTGCAAGCAACTCTTAGATATATATCGGTTCTGATGGGTAAAGAAAAAGTGCCAGAAACCATACAATGAAATCATTTAATGAGATTGTATAAGTATCATTATCCTGCCTGGGTTATCAGGCCAGGTTACGAGTGGCTAGCAAATCGATGGGTTATAGTATTACTTAAAAGGCTAAGTATGAAGTGATGGATCTTATGCAACAATGACAGTTCCTATTCTAGTGGGATTGTGTGGAATGTTACATTACAGTTTTCCAGATTCCTTTCTATCCTCAAACCTCCTCCTCAACCGAATTACTGAATATTTCTCCCATTTGTGACTTGTTGATCAGGATGTCCCACTTTGTATCTTTTTTGTTCTCCATATGGTCTTCATCCGATTGGCATGTTGCATTACGTGATTTGTTCGATTATCTGTGCTATGGAGTGTGTTTAGTGACTTAGTTTAGCTAGTTAGTGTTGTTCTTGTAGGTTACTAGTGTCCATATTTTTCTTACGTTTTGCAGATCCTTATGAACTAAAGATGTTTTTGGTTGGTTTCAGCTGGCGCCGAAGCAGAAAATTCGAATTAAACTAAGGTCTTACTGGGTTCCACTCATTGAAGATTCCTGCAAACAGATAATGGATGCTGCAAGGAGTACAAATGCAAAAATCATGGGTCCTGTGCCATTACCTACCAAAAAGCGCATCTATTGTGTTATTAAGTCTCCTCATGTTCATAAAGATTCGAGATTCCATTTCGAAACCCGAACTCACCAGCGCCTAATCGATATTTTGTACCCCACTGCCCAAACAATCGACTCGTTGATGCAACTTGATCTTCCTGCTGGTGTTGATGTGGAGGTCAAACTATGAAGAGAACAGCTTCAGCTAGGTAAAGTTAACTTCCATAAGTCTATTACATTGTCCTTCATGATGCCATTTTACATTGCACTCTGCAAAACAAGTCTATTTACAGCCAGTTGTTTTTTTCTCTTTCTCTATTTTTTTTCAAGAATTCAACCATTACTGGTTCTGCAACACTGTAAAATGCTTGGCAGCATTTCTAAATTTGGCTATATCAGTAAAATTTAGTGATGATGCAGGGAGGCAGATAATCTCACTGTTTTTAGTCTATTGATGTTAGTTTGTCAGAGAGAAAAATTGACCACTGTGAAGAGTCTACCAGTATTATGTGCTATGTAGCGAGCTTTATTTTCTTCATAATTGATAACCTTGTTTTTCATGGAAAAGTCTTGTTCGCTTACGTAATTGATCATCTAGATTGAAATAATACATACTTGTCAATCAGTGGAATGCAGGAATGAGCTGATCTGGGACGCTGCAACATTTGTTGGTTTTTATATGTCAAAAACTAAGGGCCCTTTTGATAACCATTAACCATTTCGTTTTTTGTTTTTTGTTTTGACAAATTAAGTTCAGAAACATTACTTTCGCCTATGTGTTTCTTTGTTTTGTTGTATAGTTTTCATAAACATTTTCAAAATCTATGCCAAATTTTGAAAAGAAATAAAAAACGTAGTTTCTATTTTTGAAAATTGGCTAAGAATTTGAATATGTTTCCAAGAAAGGTGAAAAACTTTCCAATGAAATTGTACAAAAACAAGTGGAATTTTTTAAAACAGAAAACTAAAAACGCAATGGTTTTCAAACAACTACTAATTAGGGAATTTGACTAAGAATTCAAATATGTTCTCCTGTGATGAAGATGGTGGAGGATAGTGCAATACAGCGGCTCTAGGTCTGAGGCGGAAAAGAAGTTGATGCTTGAGATTTAGGTCTTTGATGGAGCTAGGATGAAAAAGGAGAGGAGATGTGGGCTTTGTTTTGAACATTCATAGCAAGGAAATAGAAGGAAGAGTTGGTTATTTGAATTTGTATCTTTTTCATGGGAAGGGATGGCTTTAGCACAGGAAAGAGATGGCTTTATTTTGATTTGGAAACTTCGCATAAAATAGCTTTCAAGTTTAGAGATGGATTTTTCTTCATCTAGTAGTTGCTAAATTGGTCCCTGGTTGATGAAGATTGCATATACCATTTCATTTCCATTTTTTTTTTGCCGAGTCATTTGGGAACTTCTCCCCCTCATTTTCTGTTTGCTAATGGAGGAGCTAGTTTTGCATTTCGTTCATACCGATAGTCATCGGGCAGTCATTTCGATATATTCCCGACTTTTTTGTATGGCTACACCCCATCTTCTCATTCTTTCTTTAACACTTTTTGGTTGGTTTCTTGCATGTCAAGGTTATGGATTTCTGAAGATGTAACTACTGGGATAAAACGGAGCCTGATTGAACGGGTTGTAGAGCCGATAGCTAGTCCCCGTTACATGTTTCTTTGCTTGAGTTTCTATGCCAGTTTGACAATGGGAGCAAGGAAAATATAGGACTGTTGTAATCACATCTTTTTGTTGGTTATTTGCTGCTATGCAGCCTTGTTAATCATTTGTATTAACTGTGTTTTGTATTTTTTTTTGGTACTTAATGGAGCAATGAAAAATATGCATTATCAAATGTTGTCGAGTAGAAAACCTT

mRNA sequence

GAGCTTCCGCCATCGATAACCAGAGCAAGTTCAATGGCTATTTCTTCTCTCTCTGCCTCCATAATTCCATCTCCTACTCTATTGGGTCCTTTGTCATCTCTTTCTTCTAAACCTAGACTTCTTCCCTTCTCTGGTTCCTCTTCTACTGCTCTGAAGCTCAAACCCCTTCAATTTTCATCGTCTTCGACAAGGGTTTATGCCGCTCCTGAAGTTCTCGACTCCTCGGATACCATCGAACCGCCTCCGGAAATCCTGGAGGGCTCTGGAGCTTCCACTCTCGAGGGTGAAGAATATGAGACGCCTGGGACTTCAGCGCTTAGCATTGGTGAAGATGTGGACAGGCTGGCGCCGAAGCAGAAAATTCGAATTAAACTAAGGTCTTACTGGGTTCCACTCATTGAAGATTCCTGCAAACAGATAATGGATGCTGCAAGGAGTACAAATGCAAAAATCATGGGTCCTGTGCCATTACCTACCAAAAAGCGCATCTATTGTGTTATTAAGTCTCCTCATGTTCATAAAGATTCGAGATTCCATTTCGAAACCCGAACTCACCAGCGCCTAATCGATATTTTGTACCCCACTGCCCAAACAATCGACTCGTTGATGCAACTTGATCTTCCTGCTGGTGTTGATGTGGAGGTCAAACTATGAAGAGAACAGCTTCAGCTAGGTTATGGATTTCTGAAGATGTAACTACTGGGATAAAACGGAGCCTGATTGAACGGGTTGTAGAGCCGATAGCTAGTCCCCGTTACATGTTTCTTTGCTTGAGTTTCTATGCCAGTTTGACAATGGGAGCAAGGAAAATATAGGACTGTTGTAATCACATCTTTTTGTTGGTTATTTGCTGCTATGCAGCCTTGTTAATCATTTGTATTAACTGTGTTTTGTATTTTTTTTTGGTACTTAATGGAGCAATGAAAAATATGCATTATCAAATGTTGTCGAGTAGAAAACCTT

Coding sequence (CDS)

GAGCTTCCGCCATCGATAACCAGAGCAAGTTCAATGGCTATTTCTTCTCTCTCTGCCTCCATAATTCCATCTCCTACTCTATTGGGTCCTTTGTCATCTCTTTCTTCTAAACCTAGACTTCTTCCCTTCTCTGGTTCCTCTTCTACTGCTCTGAAGCTCAAACCCCTTCAATTTTCATCGTCTTCGACAAGGGTTTATGCCGCTCCTGAAGTTCTCGACTCCTCGGATACCATCGAACCGCCTCCGGAAATCCTGGAGGGCTCTGGAGCTTCCACTCTCGAGGGTGAAGAATATGAGACGCCTGGGACTTCAGCGCTTAGCATTGGTGAAGATGTGGACAGGCTGGCGCCGAAGCAGAAAATTCGAATTAAACTAAGGTCTTACTGGGTTCCACTCATTGAAGATTCCTGCAAACAGATAATGGATGCTGCAAGGAGTACAAATGCAAAAATCATGGGTCCTGTGCCATTACCTACCAAAAAGCGCATCTATTGTGTTATTAAGTCTCCTCATGTTCATAAAGATTCGAGATTCCATTTCGAAACCCGAACTCACCAGCGCCTAATCGATATTTTGTACCCCACTGCCCAAACAATCGACTCGTTGATGCAACTTGATCTTCCTGCTGGTGTTGATGTGGAGGTCAAACTATGA

Protein sequence

ELPPSITRASSMAISSLSASIIPSPTLLGPLSSLSSKPRLLPFSGSSSTALKLKPLQFSSSSTRVYAAPEVLDSSDTIEPPPEILEGSGASTLEGEEYETPGTSALSIGEDVDRLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARSTNAKIMGPVPLPTKKRIYCVIKSPHVHKDSRFHFETRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL
Homology
[Close]
BLAST of MC11g1025 vs. ExPASy Swiss-Prot
Match: Q9M4Y3 (30S ribosomal protein S10, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 GN=RPS10 PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 7.5e-62
Identity = 140/212 (66.04%), Postives = 156/212 (73.58%), Query Frame = 0 

Query: 12  MAISSLSASIIPSPTLLGPLSSLSSKPRLLPFSGSSS------TALKLKPLQFSSSSTRV 71
           MA SSLS +I+ SP  L   SS  +KP++   S  SS      T     P   SSS+ RV
Sbjct: 1   MATSSLS-TIVFSPLALSNSSSFPNKPQVSNLSLHSSLSNLRRTLSHSSPSSSSSSNVRV 60

Query: 72  YAAPEVLDSSDTIEPPPEILEGSGASTLEGEEYETPGTSALSIGEDVDRLAPKQKIRIKL 131
           +AAPEVL+S +T         G  +   EG E     TSAL IG D D++APKQKIRIKL
Sbjct: 61  FAAPEVLESQET---------GPESYVEEGSE-----TSALGIGADSDQMAPKQKIRIKL 120

Query: 132 RSYWVPLIEDSCKQIMDAARSTNAKIMGPVPLPTKKRIYCVIKSPHVHKDSRFHFETRTH 191
           RSYWVPLIEDSCKQIMDAAR+TNAK MGPVPLPTKKRI+CV+KSPHVHKD+RFHFE RTH
Sbjct: 121 RSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIFCVLKSPHVHKDARFHFEIRTH 180

Query: 192 QRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 218
           QRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 QRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 197

[Close]
BLAST of MC11g1025 vs. ExPASy Swiss-Prot
Match: Q9LK61 (30S ribosomal protein S10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS10 PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.5e-59
Identity = 134/212 (63.21%), Postives = 160/212 (75.47%), Query Frame = 0 

Query: 12  MAISSLSASIIPSPTLLGPLSSLSS---KPRLLPFS---GSSSTALKLKPLQFSSSSTRV 71
           MA+S++S+ ++PS  +  P SS SS   K  LLP S   G  S+ +  KP   S S T+V
Sbjct: 1   MAVSTVSSFLLPSFGI--PSSSPSSTRLKVSLLPSSSTHGGLSSCVLTKP---SVSLTKV 60

Query: 72  YAAPEVLDSSDTIEPPPEILEGSGASTLEGEEYETPGTSALSIGEDVDRLAPKQKIRIKL 131
           +A P      DT++P PEIL+   +        E P +S++S+  D D++APKQKIRIKL
Sbjct: 61  FAVP------DTLDPTPEILDEPAS--------EVPSSSSISV--DADKMAPKQKIRIKL 120

Query: 132 RSYWVPLIEDSCKQIMDAARSTNAKIMGPVPLPTKKRIYCVIKSPHVHKDSRFHFETRTH 191
           RSYWVPLIEDSCKQI+DAAR+TNAK MGPVPLPTKKRIYCV+KSPHVHKD+RFHFE RTH
Sbjct: 121 RSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTH 180

Query: 192 QRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 218
           QR+IDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 QRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 191

[Close]
BLAST of MC11g1025 vs. ExPASy Swiss-Prot
Match: P82162 (30S ribosomal protein S10 alpha, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS10 PE=1 SV=2)

HSP 1 Score: 223.0 bits (567), Expect = 3.2e-57
Identity = 133/211 (63.03%), Postives = 150/211 (71.09%), Query Frame = 0 

Query: 12  MAISSLSASIIPSPTLLGPLSSLSSKPRLLPFSGSSSTALKLKPLQ-----FSSSSTRVY 71
           MA SS+SA+++ SP  L   SS S+K      S  +        LQ      +SS+   +
Sbjct: 1   MATSSISAALL-SPLTLRNASSSSTKQDFSTLSSLNLRRTLTPTLQSGHTLSNSSNFATF 60

Query: 72  AAPEVLDSSDTIEPPPEILEGSGASTLEGEEYETPGTSALSIGEDVDRLAPKQKIRIKLR 131
           AAP  L          E+LE S  S  +G E     TS +SI  D D++APKQKIRIKLR
Sbjct: 61  AAPGAL----------EVLETSPDSFEDGSE-----TSKISIAADSDQMAPKQKIRIKLR 120

Query: 132 SYWVPLIEDSCKQIMDAARSTNAKIMGPVPLPTKKRIYCVIKSPHVHKDSRFHFETRTHQ 191
           SYWVPLIEDSCKQIMDAAR+TNAKIMGPVPLPTKKRIYCV+KSPHVHKD+RFHFE RTHQ
Sbjct: 121 SYWVPLIEDSCKQIMDAARTTNAKIMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQ 180

Query: 192 RLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 218
           RLIDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 RLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 195

[Close]
BLAST of MC11g1025 vs. ExPASy Swiss-Prot
Match: B7K833 (30S ribosomal protein S10 OS=Gloeothece citriformis (strain PCC 7424) OX=65393 GN=rpsJ PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 9.5e-33
Identity = 63/100 (63.00%), Postives = 87/100 (87.00%), Query Frame = 0 

Query: 118 KQKIRIKLRSYWVPLIEDSCKQIMDAARSTNAKIMGPVPLPTKKRIYCVIKSPHVHKDSR 177
           +QKIRI+L+++   L++ SC++I+D A  TNA  +GP+PLPTK+R+YCV++SPHV KDSR
Sbjct: 6   QQKIRIRLKAFDRRLLDTSCEKIVDTANRTNATAIGPIPLPTKRRVYCVLRSPHVDKDSR 65

Query: 178 FHFETRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 218
            HFETRTH+R+IDI  P+++TID+LM+LDLPAGVD+EVKL
Sbjct: 66  EHFETRTHRRIIDIYQPSSKTIDALMKLDLPAGVDIEVKL 105

[Close]
BLAST of MC11g1025 vs. ExPASy Swiss-Prot
Match: B0JSD9 (30S ribosomal protein S10 OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=rpsJ PE=3 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.6e-32
Identity = 63/100 (63.00%), Postives = 87/100 (87.00%), Query Frame = 0 

Query: 118 KQKIRIKLRSYWVPLIEDSCKQIMDAARSTNAKIMGPVPLPTKKRIYCVIKSPHVHKDSR 177
           +QKIRI+L+++   L++ SC++I+D A  TNA  +GP+PLPTK++IYCV++SPHV KDSR
Sbjct: 6   QQKIRIRLKAFDRRLLDTSCEKIVDTANRTNATAIGPIPLPTKRKIYCVLRSPHVDKDSR 65

Query: 178 FHFETRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 218
            HFETRTH+R+IDI  P+++TID+LM+LDLPAGVD+EVKL
Sbjct: 66  EHFETRTHRRIIDIYQPSSKTIDALMKLDLPAGVDIEVKL 105

[Close]
BLAST of MC11g1025 vs. NCBI nr
Match: XP_022139745.1 (30S ribosomal protein S10, chloroplastic [Momordica charantia])

HSP 1 Score: 392 bits (1008), Expect = 3.58e-137
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0 

Query: 12  MAISSLSASIIPSPTLLGPLSSLSSKPRLLPFSGSSSTALKLKPLQFSSSSTRVYAAPEV 71
           MAISSLSASIIPSPTLLGPLSSLSSKPRLLPFSGSSSTALKLKPLQFSSSSTRVYAAPEV
Sbjct: 1   MAISSLSASIIPSPTLLGPLSSLSSKPRLLPFSGSSSTALKLKPLQFSSSSTRVYAAPEV 60

Query: 72  LDSSDTIEPPPEILEGSGASTLEGEEYETPGTSALSIGEDVDRLAPKQKIRIKLRSYWVP 131
           LDSSDTIEPPPEILEGSGASTLEGEEYETPGTSALSIGEDVDRLAPKQKIRIKLRSYWVP
Sbjct: 61  LDSSDTIEPPPEILEGSGASTLEGEEYETPGTSALSIGEDVDRLAPKQKIRIKLRSYWVP 120

Query: 132 LIEDSCKQIMDAARSTNAKIMGPVPLPTKKRIYCVIKSPHVHKDSRFHFETRTHQRLIDI 191
           LIEDSCKQIMDAARSTNAKIMGPVPLPTKKRIYCVIKSPHVHKDSRFHFETRTHQRLIDI
Sbjct: 121 LIEDSCKQIMDAARSTNAKIMGPVPLPTKKRIYCVIKSPHVHKDSRFHFETRTHQRLIDI 180

Query: 192 LYPTAQTIDSLMQLDLPAGVDVEVKL 217
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 206

[Close]
BLAST of MC11g1025 vs. NCBI nr
Match: XP_008462962.2 (PREDICTED: 30S ribosomal protein S10, chloroplastic [Cucumis melo])

HSP 1 Score: 356 bits (914), Expect = 7.59e-123
Identity = 185/206 (89.81%), Postives = 194/206 (94.17%), Query Frame = 0 

Query: 12  MAISSLSASIIPSPTLLGPLSSLSSKPRLLPFSGSSSTALKLKPLQFSSSSTRVYAAPEV 71
           MAISSLSA+IIPSPTL   LSS SSKP+ LPF GSSSTALKLKPLQFS  STRVYAAPEV
Sbjct: 1   MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPSTRVYAAPEV 60

Query: 72  LDSSDTIEPPPEILEGSGASTLEGEEYETPGTSALSIGEDVDRLAPKQKIRIKLRSYWVP 131
           LDSSDTIEPPPEILEGSG +TLEGE++E PGTSALSIGEDVD+LAPKQKIRIKLRSYWVP
Sbjct: 61  LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 120

Query: 132 LIEDSCKQIMDAARSTNAKIMGPVPLPTKKRIYCVIKSPHVHKDSRFHFETRTHQRLIDI 191
           LIEDSCKQIMDAAR+TNAK MGPVPLPTKKRIYCV+KSPHVHKD+RFHFE RTHQRLIDI
Sbjct: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180

Query: 192 LYPTAQTIDSLMQLDLPAGVDVEVKL 217
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 206

[Close]
BLAST of MC11g1025 vs. NCBI nr
Match: XP_038899555.1 (30S ribosomal protein S10, chloroplastic [Benincasa hispida] >XP_038899556.1 30S ribosomal protein S10, chloroplastic [Benincasa hispida])

HSP 1 Score: 354 bits (908), Expect = 6.23e-122
Identity = 183/206 (88.83%), Postives = 193/206 (93.69%), Query Frame = 0 

Query: 12  MAISSLSASIIPSPTLLGPLSSLSSKPRLLPFSGSSSTALKLKPLQFSSSSTRVYAAPEV 71
           MAISSLSA+IIPSPTL   LSS SSKP+LLPFSG SSTALKLKPLQFS  +TRVY APEV
Sbjct: 1   MAISSLSATIIPSPTLFSSLSSHSSKPKLLPFSGLSSTALKLKPLQFSLPTTRVYVAPEV 60

Query: 72  LDSSDTIEPPPEILEGSGASTLEGEEYETPGTSALSIGEDVDRLAPKQKIRIKLRSYWVP 131
           LDSSDTIEPPPEILEGSG +TLEGE++E PGTSAL IGEDVD+LAPKQKIRIKLRSYWVP
Sbjct: 61  LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALGIGEDVDKLAPKQKIRIKLRSYWVP 120

Query: 132 LIEDSCKQIMDAARSTNAKIMGPVPLPTKKRIYCVIKSPHVHKDSRFHFETRTHQRLIDI 191
           LIEDSCKQIMDAAR+TNAK MGPVPLPTKKRIYCV+KSPHVHKD+RFHFE RTHQRLIDI
Sbjct: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180

Query: 192 LYPTAQTIDSLMQLDLPAGVDVEVKL 217
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 206

[Close]
BLAST of MC11g1025 vs. NCBI nr
Match: KAG7037344.1 (30S ribosomal protein S10, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 353 bits (905), Expect = 1.79e-121
Identity = 181/206 (87.86%), Postives = 194/206 (94.17%), Query Frame = 0 

Query: 12  MAISSLSASIIPSPTLLGPLSSLSSKPRLLPFSGSSSTALKLKPLQFSSSSTRVYAAPEV 71
           MAISSLSA+IIPSPTL GP+SSLSSKP+LLPFS SS++  KL PLQFS SSTRVYAAPEV
Sbjct: 1   MAISSLSATIIPSPTLFGPISSLSSKPKLLPFSASSTSVSKLNPLQFSLSSTRVYAAPEV 60

Query: 72  LDSSDTIEPPPEILEGSGASTLEGEEYETPGTSALSIGEDVDRLAPKQKIRIKLRSYWVP 131
           LDS  TIEPPPEILEGSGA+ LEGE++E PGTSALSIGEDVD+LAPKQKIRIKLRSYWVP
Sbjct: 61  LDSPGTIEPPPEILEGSGAAVLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 120

Query: 132 LIEDSCKQIMDAARSTNAKIMGPVPLPTKKRIYCVIKSPHVHKDSRFHFETRTHQRLIDI 191
           LIEDSCKQI+DAAR+TNAK MGPVPLPTKKRIYCV+KSPHVHKD+RFHFE RTHQRLIDI
Sbjct: 121 LIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180

Query: 192 LYPTAQTIDSLMQLDLPAGVDVEVKL 217
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 206

[Close]
BLAST of MC11g1025 vs. NCBI nr
Match: XP_022981608.1 (30S ribosomal protein S10, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 352 bits (904), Expect = 3.13e-121
Identity = 181/207 (87.44%), Postives = 194/207 (93.72%), Query Frame = 0 

Query: 11  SMAISSLSASIIPSPTLLGPLSSLSSKPRLLPFSGSSSTALKLKPLQFSSSSTRVYAAPE 70
           SMAISSLSA+IIPSPTL GP+SSLSSKP+LLPFS SS++  KL PLQFS SSTRVYAAPE
Sbjct: 6   SMAISSLSATIIPSPTLFGPISSLSSKPKLLPFSASSTSVSKLNPLQFSLSSTRVYAAPE 65

Query: 71  VLDSSDTIEPPPEILEGSGASTLEGEEYETPGTSALSIGEDVDRLAPKQKIRIKLRSYWV 130
           VLDS  T EPPPEILEGSGA+ LEGE++E PGTSALSIGEDVD+LAPKQKIRIKLRSYWV
Sbjct: 66  VLDSPGTFEPPPEILEGSGAAVLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWV 125

Query: 131 PLIEDSCKQIMDAARSTNAKIMGPVPLPTKKRIYCVIKSPHVHKDSRFHFETRTHQRLID 190
           PLIEDSCKQI+DAAR+TNAK MGPVPLPTKKRIYCV+KSPHVHKD+RFHFE RTHQRLID
Sbjct: 126 PLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLID 185

Query: 191 ILYPTAQTIDSLMQLDLPAGVDVEVKL 217
           ILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 186 ILYPTAQTIDSLMQLDLPAGVDVEVKL 212

[Close]
BLAST of MC11g1025 vs. ExPASy TrEMBL
Match: A0A6J1CD58 (30S ribosomal protein S10, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111010584 PE=3 SV=1)

HSP 1 Score: 392 bits (1008), Expect = 1.73e-137
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0 

Query: 12  MAISSLSASIIPSPTLLGPLSSLSSKPRLLPFSGSSSTALKLKPLQFSSSSTRVYAAPEV 71
           MAISSLSASIIPSPTLLGPLSSLSSKPRLLPFSGSSSTALKLKPLQFSSSSTRVYAAPEV
Sbjct: 1   MAISSLSASIIPSPTLLGPLSSLSSKPRLLPFSGSSSTALKLKPLQFSSSSTRVYAAPEV 60

Query: 72  LDSSDTIEPPPEILEGSGASTLEGEEYETPGTSALSIGEDVDRLAPKQKIRIKLRSYWVP 131
           LDSSDTIEPPPEILEGSGASTLEGEEYETPGTSALSIGEDVDRLAPKQKIRIKLRSYWVP
Sbjct: 61  LDSSDTIEPPPEILEGSGASTLEGEEYETPGTSALSIGEDVDRLAPKQKIRIKLRSYWVP 120

Query: 132 LIEDSCKQIMDAARSTNAKIMGPVPLPTKKRIYCVIKSPHVHKDSRFHFETRTHQRLIDI 191
           LIEDSCKQIMDAARSTNAKIMGPVPLPTKKRIYCVIKSPHVHKDSRFHFETRTHQRLIDI
Sbjct: 121 LIEDSCKQIMDAARSTNAKIMGPVPLPTKKRIYCVIKSPHVHKDSRFHFETRTHQRLIDI 180

Query: 192 LYPTAQTIDSLMQLDLPAGVDVEVKL 217
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 206

[Close]
BLAST of MC11g1025 vs. ExPASy TrEMBL
Match: A0A1S3CI46 (30S ribosomal protein S10, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501224 PE=3 SV=1)

HSP 1 Score: 356 bits (914), Expect = 3.68e-123
Identity = 185/206 (89.81%), Postives = 194/206 (94.17%), Query Frame = 0 

Query: 12  MAISSLSASIIPSPTLLGPLSSLSSKPRLLPFSGSSSTALKLKPLQFSSSSTRVYAAPEV 71
           MAISSLSA+IIPSPTL   LSS SSKP+ LPF GSSSTALKLKPLQFS  STRVYAAPEV
Sbjct: 1   MAISSLSATIIPSPTLFTSLSSHSSKPKFLPFPGSSSTALKLKPLQFSLPSTRVYAAPEV 60

Query: 72  LDSSDTIEPPPEILEGSGASTLEGEEYETPGTSALSIGEDVDRLAPKQKIRIKLRSYWVP 131
           LDSSDTIEPPPEILEGSG +TLEGE++E PGTSALSIGEDVD+LAPKQKIRIKLRSYWVP
Sbjct: 61  LDSSDTIEPPPEILEGSGVATLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 120

Query: 132 LIEDSCKQIMDAARSTNAKIMGPVPLPTKKRIYCVIKSPHVHKDSRFHFETRTHQRLIDI 191
           LIEDSCKQIMDAAR+TNAK MGPVPLPTKKRIYCV+KSPHVHKD+RFHFE RTHQRLIDI
Sbjct: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180

Query: 192 LYPTAQTIDSLMQLDLPAGVDVEVKL 217
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 206

[Close]
BLAST of MC11g1025 vs. ExPASy TrEMBL
Match: A0A6J1J2J9 (30S ribosomal protein S10, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111480677 PE=3 SV=1)

HSP 1 Score: 352 bits (904), Expect = 1.52e-121
Identity = 181/207 (87.44%), Postives = 194/207 (93.72%), Query Frame = 0 

Query: 11  SMAISSLSASIIPSPTLLGPLSSLSSKPRLLPFSGSSSTALKLKPLQFSSSSTRVYAAPE 70
           SMAISSLSA+IIPSPTL GP+SSLSSKP+LLPFS SS++  KL PLQFS SSTRVYAAPE
Sbjct: 6   SMAISSLSATIIPSPTLFGPISSLSSKPKLLPFSASSTSVSKLNPLQFSLSSTRVYAAPE 65

Query: 71  VLDSSDTIEPPPEILEGSGASTLEGEEYETPGTSALSIGEDVDRLAPKQKIRIKLRSYWV 130
           VLDS  T EPPPEILEGSGA+ LEGE++E PGTSALSIGEDVD+LAPKQKIRIKLRSYWV
Sbjct: 66  VLDSPGTFEPPPEILEGSGAAVLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWV 125

Query: 131 PLIEDSCKQIMDAARSTNAKIMGPVPLPTKKRIYCVIKSPHVHKDSRFHFETRTHQRLID 190
           PLIEDSCKQI+DAAR+TNAK MGPVPLPTKKRIYCV+KSPHVHKD+RFHFE RTHQRLID
Sbjct: 126 PLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLID 185

Query: 191 ILYPTAQTIDSLMQLDLPAGVDVEVKL 217
           ILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 186 ILYPTAQTIDSLMQLDLPAGVDVEVKL 212

[Close]
BLAST of MC11g1025 vs. ExPASy TrEMBL
Match: A0A6J1FPZ5 (30S ribosomal protein S10, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111446197 PE=3 SV=1)

HSP 1 Score: 352 bits (902), Expect = 2.48e-121
Identity = 180/206 (87.38%), Postives = 194/206 (94.17%), Query Frame = 0 

Query: 12  MAISSLSASIIPSPTLLGPLSSLSSKPRLLPFSGSSSTALKLKPLQFSSSSTRVYAAPEV 71
           MAISSLSA+IIPSPTL GP+SSLSSKP+LLPFS SS++  KL PLQFS SSTRVYAAPEV
Sbjct: 1   MAISSLSATIIPSPTLFGPISSLSSKPKLLPFSASSTSVSKLNPLQFSLSSTRVYAAPEV 60

Query: 72  LDSSDTIEPPPEILEGSGASTLEGEEYETPGTSALSIGEDVDRLAPKQKIRIKLRSYWVP 131
           LDS  TIEPPPEILEGSGA+ LEGE++E PGTSALSIGEDVD+LAPKQKIRIKLRSYWVP
Sbjct: 61  LDSPGTIEPPPEILEGSGAAVLEGEDFEAPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 120

Query: 132 LIEDSCKQIMDAARSTNAKIMGPVPLPTKKRIYCVIKSPHVHKDSRFHFETRTHQRLIDI 191
           LIEDSCKQI+D+AR+TNAK MGPVPLPTKKRIYCV+KSPHVHKD+RFHFE RTHQRLIDI
Sbjct: 121 LIEDSCKQILDSARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180

Query: 192 LYPTAQTIDSLMQLDLPAGVDVEVKL 217
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 206

[Close]
BLAST of MC11g1025 vs. ExPASy TrEMBL
Match: A0A0A0LEH6 (Ribosomal_S10 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G769090 PE=3 SV=1)

HSP 1 Score: 349 bits (896), Expect = 2.03e-120
Identity = 182/206 (88.35%), Postives = 191/206 (92.72%), Query Frame = 0 

Query: 12  MAISSLSASIIPSPTLLGPLSSLSSKPRLLPFSGSSSTALKLKPLQFSSSSTRVYAAPEV 71
           MAISSLSA+IIPSPTL   LSS SSKP+  PF  SSSTALKLKPLQFS  STR+YAAPEV
Sbjct: 1   MAISSLSATIIPSPTLFTSLSSHSSKPKFPPFPASSSTALKLKPLQFSFPSTRLYAAPEV 60

Query: 72  LDSSDTIEPPPEILEGSGASTLEGEEYETPGTSALSIGEDVDRLAPKQKIRIKLRSYWVP 131
           LDS DTIEPPPEILEGSG STLEGE++E PGTSALSIGEDVD+LAPKQKIRIKLRSYWVP
Sbjct: 61  LDSPDTIEPPPEILEGSGVSTLEGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVP 120

Query: 132 LIEDSCKQIMDAARSTNAKIMGPVPLPTKKRIYCVIKSPHVHKDSRFHFETRTHQRLIDI 191
           LIEDSCKQIMDAAR+TNAK MGPVPLPTKKRIYCV+KSPHVHKD+RFHFE RTHQRLIDI
Sbjct: 121 LIEDSCKQIMDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDI 180

Query: 192 LYPTAQTIDSLMQLDLPAGVDVEVKL 217
           LYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 LYPTAQTIDSLMQLDLPAGVDVEVKL 206

[Close]
BLAST of MC11g1025 vs. TAIR 10
Match: AT3G13120.1 (Ribosomal protein S10p/S20e family protein )

HSP 1 Score: 229.2 bits (583), Expect = 3.2e-60
Identity = 134/212 (63.21%), Postives = 160/212 (75.47%), Query Frame = 0 

Query: 12  MAISSLSASIIPSPTLLGPLSSLSS---KPRLLPFS---GSSSTALKLKPLQFSSSSTRV 71
           MA+S++S+ ++PS  +  P SS SS   K  LLP S   G  S+ +  KP   S S T+V
Sbjct: 1   MAVSTVSSFLLPSFGI--PSSSPSSTRLKVSLLPSSSTHGGLSSCVLTKP---SVSLTKV 60

Query: 72  YAAPEVLDSSDTIEPPPEILEGSGASTLEGEEYETPGTSALSIGEDVDRLAPKQKIRIKL 131
           +A P      DT++P PEIL+   +        E P +S++S+  D D++APKQKIRIKL
Sbjct: 61  FAVP------DTLDPTPEILDEPAS--------EVPSSSSISV--DADKMAPKQKIRIKL 120

Query: 132 RSYWVPLIEDSCKQIMDAARSTNAKIMGPVPLPTKKRIYCVIKSPHVHKDSRFHFETRTH 191
           RSYWVPLIEDSCKQI+DAAR+TNAK MGPVPLPTKKRIYCV+KSPHVHKD+RFHFE RTH
Sbjct: 121 RSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTH 180

Query: 192 QRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 218
           QR+IDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 QRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 191

[Close]
BLAST of MC11g1025 vs. TAIR 10
Match: AT3G13120.2 (Ribosomal protein S10p/S20e family protein )

HSP 1 Score: 229.2 bits (583), Expect = 3.2e-60
Identity = 134/212 (63.21%), Postives = 160/212 (75.47%), Query Frame = 0 

Query: 12  MAISSLSASIIPSPTLLGPLSSLSS---KPRLLPFS---GSSSTALKLKPLQFSSSSTRV 71
           MA+S++S+ ++PS  +  P SS SS   K  LLP S   G  S+ +  KP   S S T+V
Sbjct: 1   MAVSTVSSFLLPSFGI--PSSSPSSTRLKVSLLPSSSTHGGLSSCVLTKP---SVSLTKV 60

Query: 72  YAAPEVLDSSDTIEPPPEILEGSGASTLEGEEYETPGTSALSIGEDVDRLAPKQKIRIKL 131
           +A P      DT++P PEIL+   +        E P +S++S+  D D++APKQKIRIKL
Sbjct: 61  FAVP------DTLDPTPEILDEPAS--------EVPSSSSISV--DADKMAPKQKIRIKL 120

Query: 132 RSYWVPLIEDSCKQIMDAARSTNAKIMGPVPLPTKKRIYCVIKSPHVHKDSRFHFETRTH 191
           RSYWVPLIEDSCKQI+DAAR+TNAK MGPVPLPTKKRIYCV+KSPHVHKD+RFHFE RTH
Sbjct: 121 RSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTH 180

Query: 192 QRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 218
           QR+IDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 181 QRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 191

The following BLAST results are available for this feature:
BLAST of MC11g1025 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M4Y37.5e-6266.0430S ribosomal protein S10, chloroplastic OS=Mesembryanthemum crystallinum OX=354... [more]
Q9LK614.5e-5963.2130S ribosomal protein S10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS1... [more]
P821623.2e-5763.0330S ribosomal protein S10 alpha, chloroplastic OS=Spinacia oleracea OX=3562 GN=R... [more]
B7K8339.5e-3363.0030S ribosomal protein S10 OS=Gloeothece citriformis (strain PCC 7424) OX=65393 G... [more]
B0JSD91.6e-3263.0030S ribosomal protein S10 OS=Microcystis aeruginosa (strain NIES-843) OX=449447 ... [more]
BLAST of MC11g1025 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022139745.13.58e-137100.0030S ribosomal protein S10, chloroplastic [Momordica charantia][more]
XP_008462962.27.59e-12389.81PREDICTED: 30S ribosomal protein S10, chloroplastic [Cucumis melo][more]
XP_038899555.16.23e-12288.8330S ribosomal protein S10, chloroplastic [Benincasa hispida] >XP_038899556.1 30S... [more]
KAG7037344.11.79e-12187.8630S ribosomal protein S10, chloroplastic [Cucurbita argyrosperma subsp. argyrosp... [more]
XP_022981608.13.13e-12187.4430S ribosomal protein S10, chloroplastic-like [Cucurbita maxima][more]
BLAST of MC11g1025 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CD581.73e-137100.0030S ribosomal protein S10, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11... [more]
A0A1S3CI463.68e-12389.8130S ribosomal protein S10, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501224... [more]
A0A6J1J2J91.52e-12187.4430S ribosomal protein S10, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A6J1FPZ52.48e-12187.3830S ribosomal protein S10, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L... [more]
A0A0A0LEH62.03e-12088.35Ribosomal_S10 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G7690... [more]
BLAST of MC11g1025 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G13120.13.2e-6063.21Ribosomal protein S10p/S20e family protein [more]
AT3G13120.23.2e-6063.21Ribosomal protein S10p/S20e family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001848Ribosomal protein S10PRINTSPR00971RIBOSOMALS10coord: 120..133
score: 42.58
coord: 155..170
score: 51.8
coord: 176..190
score: 55.9
IPR001848Ribosomal protein S10TIGRFAMTIGR01049TIGR01049coord: 119..216
e-value: 2.1E-40
score: 135.0
IPR001848Ribosomal protein S10PANTHERPTHR1170030S RIBOSOMAL PROTEIN S10 FAMILY MEMBERcoord: 12..217
IPR001848Ribosomal protein S10HAMAPMF_00508Ribosomal_S10coord: 118..217
score: 24.256376
IPR027486Ribosomal protein S10 domainSMARTSM01403Ribosomal_S10_2coord: 122..216
e-value: 6.8E-51
score: 185.1
IPR027486Ribosomal protein S10 domainPFAMPF00338Ribosomal_S10coord: 122..216
e-value: 3.7E-32
score: 110.4
IPR036838Ribosomal protein S10 domain superfamilyGENE3D3.30.70.600Ribosomal protein S10 domaincoord: 110..217
e-value: 2.3E-40
score: 139.2
IPR036838Ribosomal protein S10 domain superfamilySUPERFAMILY54999Ribosomal protein S10coord: 120..217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..103
NoneNo IPR availablePANTHERPTHR11700:SF31BNAC05G40270D PROTEINcoord: 12..217
IPR018268Ribosomal protein S10, conserved sitePROSITEPS00361RIBOSOMAL_S10coord: 144..159

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC11g1025.1MC11g1025.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005739 mitochondrion
cellular_component GO:0015935 small ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003729 mRNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding