MC11g0961 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0961
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Vascular-related unknown protein 2
Location	MC11: 8176761 .. 8177660 (-)
RNA-Seq Expression	MC11g0961
Synteny	MC11g0961

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAATCAAACTCCACCAACAATTCCCAAATAAGCTGCAGCCGAGGCCGCGACCGCAGCGCCGATGGCGATCGGTCCCCGGAGGAGAGTGGCTGGACCATCTACTTTGAAGACTTCCTCAACTCTTCCGACCATCAACAACTCAGCTCCTTCTCTTCTGATGGTGTTGCTCCTGATGATCAACCCCACGTCGCACCTGACGCTGCTTCCTCCGTGGTCGGTGACAACGACGTGGCCGTGCCTGGGTTGAGCTGCAAAGTTATGAATGGTTTCAAGAAGAGGAGGATGATGATCAAAGAGGTGTTTGTTGAAGATGAGTCCTTGGAGGATACTGCTAGCTCCCCTGTCAATAGCCCCAAGGTGTGAATTTTTTTTTTTTTTAAATGATGATTCTAAATTCCATGATATAATTAAAAGCACTTTTAAAATTTCCCACTAGATTTATAAATGAAAAAAAGTCAATGCATCAAGTGAAAAGTAATTCTAGTTCATTAAAATGAAGTATTTTTCCTTTTCAAAAAATTATCCCAAATTTCAATGCCCTTAAAATAATTTGTGAAAAAAAAAAAGAAAAATTTCTTGAGGTGGGTTTTGTTTGATGTGTTTAAACTTTCTGAACTCAGGTTCCTGAGTCAACCTACTTCAGCAAAAACCAGAAGCACAAGGAGAATCTGATAACTCCTCAGGTAATTAATAAATATTTACTAAAGTTTCAAACTTTAATCTGATTAGCAATTTTCTCGAGAAAAGAAACACTAATTTTCCGGGAAAATGGATGTTTTGTTTTGTGGGCAGGTGGAAGAAAGATCAAGAGAAATGGATTGTGAGTACACACAATTGAAGAAAAGAGGGCTTTGCTTAGTACCTTTGTCAATGGTAGTTAATTATTTGGCTGAA

mRNA sequence

ATGGCCAAATCAAACTCCACCAACAATTCCCAAATAAGCTGCAGCCGAGGCCGCGACCGCAGCGCCGATGGCGATCGGTCCCCGGAGGAGAGTGGCTGGACCATCTACTTTGAAGACTTCCTCAACTCTTCCGACCATCAACAACTCAGCTCCTTCTCTTCTGATGGTGTTGCTCCTGATGATCAACCCCACGTCGCACCTGACGCTGCTTCCTCCGTGGTCGGTGACAACGACGTGGCCGTGCCTGGGTTGAGCTGCAAAGTTATGAATGGTTTCAAGAAGAGGAGGATGATGATCAAAGAGGTGTTTGTTGAAGATGAGTCCTTGGAGGATACTGCTAGCTCCCCTGTCAATAGCCCCAAGGTTCCTGAGTCAACCTACTTCAGCAAAAACCAGAAGCACAAGGAGAATCTGATAACTCCTCAGGTGGAAGAAAGATCAAGAGAAATGGATTGTGAGTACACACAATTGAAGAAAAGAGGGCTTTGCTTAGTACCTTTGTCAATGGTAGTTAATTATTTGGCTGAA

Coding sequence (CDS)

ATGGCCAAATCAAACTCCACCAACAATTCCCAAATAAGCTGCAGCCGAGGCCGCGACCGCAGCGCCGATGGCGATCGGTCCCCGGAGGAGAGTGGCTGGACCATCTACTTTGAAGACTTCCTCAACTCTTCCGACCATCAACAACTCAGCTCCTTCTCTTCTGATGGTGTTGCTCCTGATGATCAACCCCACGTCGCACCTGACGCTGCTTCCTCCGTGGTCGGTGACAACGACGTGGCCGTGCCTGGGTTGAGCTGCAAAGTTATGAATGGTTTCAAGAAGAGGAGGATGATGATCAAAGAGGTGTTTGTTGAAGATGAGTCCTTGGAGGATACTGCTAGCTCCCCTGTCAATAGCCCCAAGGTTCCTGAGTCAACCTACTTCAGCAAAAACCAGAAGCACAAGGAGAATCTGATAACTCCTCAGGTGGAAGAAAGATCAAGAGAAATGGATTGTGAGTACACACAATTGAAGAAAAGAGGGCTTTGCTTAGTACCTTTGTCAATGGTAGTTAATTATTTGGCTGAA

Protein sequence

MAKSNSTNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPDDQPHVAPDAASSVVGDNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMDCEYTQLKKRGLCLVPLSMVVNYLAE

Homology

[Close]

BLAST of MC11g0961 vs. ExPASy Swiss-Prot
Match: Q5BPG5 (Vascular-related unknown protein 4 OS=Arabidopsis thaliana OX=3702 GN=VUP4 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.6e-09
Identity = 61/174 (35.06%), Postives = 80/174 (45.98%), Query Frame = 0


Query: 6   STNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLN-SSDHQQLSSFSSDGVAPDDQPH 65
           S+ N+    S+        D++PEES WT+YFEDF   SS    +  FSS  V+      
Sbjct: 3   SSMNNAFIMSKHETAMFTDDQNPEESSWTMYFEDFFEASSSIVDVGDFSSSSVS------ 62

Query: 66  VAPDAASSVVGDNDVAVPGLSCKVMNGFKKRRMMIKEV-FVEDESLEDTASSPVNSPKVP 125
              DAAS V     + V   S +  +    +R   +E+ F     LEDTASSP  SP V 
Sbjct: 63  ---DAASFVATKKTLNV---SKQEGSNLDIKRTRNREIPFGRHHDLEDTASSPSGSPNVY 122

Query: 126 ESTYFSKNQKHKENLITPQVEERSREMDCE---YTQLKKRGLCLVPLSMVVNYL 175
                  N       I    E+R   +  +      LKK+GLCLVPLSMV N+L
Sbjct: 123 SMMNLQDNNTRHGGGIVGDDEKRVSAVPNQGGLPIDLKKKGLCLVPLSMVTNFL 164

[Close]

BLAST of MC11g0961 vs. ExPASy Swiss-Prot
Match: Q9LSZ3 (Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.9e-07
Identity = 56/192 (29.17%), Postives = 81/192 (42.19%), Query Frame = 0


Query: 19  DRSADGDRSPEESGWTIYFEDFLN--------SSDHQQLSSFSSDGVAPDDQPHVAPDAA 78
           D  + G    EESGWT Y +DF N         +DHQ  SS+S    +      +  DAA
Sbjct: 26  DHDSHGGDHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTS----LVSDAA 85

Query: 79  SSVVGDNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSPKVPESTYFSK 138
           +         V     K+  G    R   K++  ED+SLEDTASSPVNSPKV    +   
Sbjct: 86  THAFSGKSFPV-NFPAKLKFG----RGRTKKI-CEDDSLEDTASSPVNSPKVSHFEHIQT 145

Query: 139 NQKHKENLITP---------------QVEERSREM--------------DCEYTQLKKRG 174
             +  E+ ++                Q++E   +               +     L+ RG
Sbjct: 146 PPRKIEDYVSSSFVMGNIRGMGDHQIQIQEGGEQKVTLMRNLIDGNNNNNNNNMDLRSRG 205

[Close]

BLAST of MC11g0961 vs. ExPASy Swiss-Prot
Match: Q9C6I7 (Vascular-related unknown protein 2 OS=Arabidopsis thaliana OX=3702 GN=VUP2 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.2e-04
Identity = 61/197 (30.96%), Postives = 90/197 (45.69%), Query Frame = 0


Query: 5   NSTNN--SQISCSRGRDRSADGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPDDQ 64
           NS NN   Q   S  + R    +   EES W +YFED     D + + +        D+ 
Sbjct: 3   NSVNNCVRQRVFSNHQIRMIHEEEDHEESSWIVYFEDI--DHDDEMVETEGEMTHYYDND 62

Query: 65  PHVAPDAASSV--VGDNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESL----------E 124
             +  DAAS V     N+V V   +  +    KKRR++ +    E+E L          E
Sbjct: 63  SSMISDAASPVHTTKINNV-VRRKANNINTNPKKRRIIHQHKEEEEEELQKGEEEEEDEE 122

Query: 125 DTASSPVNSPKV-------PESTYFSKNQ----KHKENLITPQVEERSREMDCEYT-QLK 176
           DTASSP N  K+        ++T + K        +   IT    +    M+ E++ +LK
Sbjct: 123 DTASSPSNKTKIFSVLDHANDNTRYGKTMDNVTSEEIGCITETGSKIKEIMNEEFSAELK 182

[Close]

BLAST of MC11g0961 vs. NCBI nr
Match: XP_022139703.1 (uncharacterized protein LOC111010550 [Momordica charantia])

HSP 1 Score: 241 bits (614), Expect = 4.30e-79
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MAKSNSTNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPD 60
           MAKSNSTNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPD
Sbjct: 1   MAKSNSTNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPD 60

Query: 61  DQPHVAPDAASSVVGDNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSP 120
           DQPHVAPDAASSVVGDNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSP
Sbjct: 61  DQPHVAPDAASSVVGDNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSP 120

Query: 121 KV 122
           KV
Sbjct: 121 KV 122

[Close]

BLAST of MC11g0961 vs. NCBI nr
Match: XP_038899309.1 (vascular-related unknown protein 4-like isoform X1 [Benincasa hispida])

HSP 1 Score: 180 bits (457), Expect = 2.19e-54
Identity = 117/191 (61.26%), Postives = 129/191 (67.54%), Query Frame = 0


Query: 1   MAKSNSTNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLNS--SDHQQLSSFSSDGVA 60
           MAK NSTN+S             GD SPEESGWTIYFEDFLN+  S HQ  +SFSS   +
Sbjct: 1   MAKENSTNDSLYH---------GGDPSPEESGWTIYFEDFLNTNHSSHQPPTSFSSSHFS 60

Query: 61  PDDQPHVAPDAASSVVG-----DNDVAV--PGLSCKVMNGFKKRRMMIKEVFVEDESLED 120
            D    VA DAASSV       DND A   PG   K    F K+R MIKE+FVEDE+LED
Sbjct: 61  FDQSYSVA-DAASSVPDHKLPVDNDEAALDPGFGYKDHINFFKKRKMIKELFVEDEALED 120

Query: 121 TASSPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMDC------EYTQLKKRGLCLV 176
           TASSPVNSPKV +STYFSKNQKHKENL TP+V+ER REM        +Y +LKKRGLCLV
Sbjct: 121 TASSPVNSPKVCDSTYFSKNQKHKENLRTPEVDER-REMGNFVGMGNDYRELKKRGLCLV 180

[Close]

BLAST of MC11g0961 vs. NCBI nr
Match: XP_031739077.1 (vascular-related unknown protein 4 [Cucumis sativus] >KGN58042.2 hypothetical protein Csa_010736 [Cucumis sativus])

HSP 1 Score: 166 bits (419), Expect = 1.39e-48
Identity = 107/197 (54.31%), Postives = 129/197 (65.48%), Query Frame = 0


Query: 1   MAKSNSTNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLNS----SDHQQLSSFSSDG 60
           MA  NSTNN+ ++          G+ SPE+SGWTIYFEDFLN+    S +Q L+SFS+  
Sbjct: 1   MANENSTNNNSLNYH--------GEESPEDSGWTIYFEDFLNTDNPNSHNQSLTSFSASS 60

Query: 61  VAPDDQPHVAPDAASSVV--------GDNDVAVPGLSCKV---MNGFKKRRMMIKEVFVE 120
               D      DAASSV          D     PG   K    +N FKKR+M IKE+FV+
Sbjct: 61  HFSLD----VTDAASSVAHRKLPHDHNDQVSEQPGFGYKDDDHINFFKKRKM-IKELFVK 120

Query: 121 DESLEDTASSPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMDC------EYTQLKK 176
           DE+LEDTASSPVNSPK+  STYFSKNQKH++NLI P+VEER REMD       +YT+LKK
Sbjct: 121 DEALEDTASSPVNSPKISGSTYFSKNQKHRDNLIAPEVEER-REMDNLIGIGNDYTELKK 180

[Close]

BLAST of MC11g0961 vs. NCBI nr
Match: XP_022937320.1 (vascular-related unknown protein 4-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 165 bits (418), Expect = 1.80e-48
Identity = 97/167 (58.08%), Postives = 114/167 (68.26%), Query Frame = 0


Query: 24  GDRSPEESGWTIYFEDFLNSSD--HQQLSSFSSDGVAPDDQPHVAPDAASSVVG------ 83
           GD+S EESGWTIYFEDFLN+    +Q  +SFSS  ++PD    +A DAASSVV       
Sbjct: 15  GDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIA-DAASSVVDHKLLEN 74

Query: 84  -DNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSPKVPESTYFSKNQKH 143
            D     PG SCK    F K+R MI EVFV+DE+LEDTASSPVNSPKV +S YFSKN +H
Sbjct: 75  HDGAAMDPGFSCKDHINFFKKRKMIYEVFVDDEALEDTASSPVNSPKVCDSNYFSKNPRH 134

Query: 144 KENLITPQVEERSREMDC-----EYTQLKKRGLCLVPLSMVVNYLAE 176
           K  LITPQV ER    D      EYT+LKKRGLCLVP SM++NY+ +
Sbjct: 135 KGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ 180

[Close]

BLAST of MC11g0961 vs. NCBI nr
Match: XP_022976591.1 (vascular-related unknown protein 4-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 164 bits (414), Expect = 7.25e-48
Identity = 98/167 (58.68%), Postives = 117/167 (70.06%), Query Frame = 0


Query: 24  GDRSPEESGWTIYFEDFLNSSD--HQQLSSFSSDGVAPDDQPHVAPDAASSVV-----GD 83
           GD+S EESGWTIYFEDFLN+    +Q  +SFSS   +PD    VA DAASSVV     G+
Sbjct: 15  GDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSYPPSPDQSYPVA-DAASSVVDHKLLGN 74

Query: 84  NDVAV--PGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSPKVPESTYFSKNQKH 143
           +D A   PG SCK    F K+R MI E+ V+DE+LEDTASSPVNSPKV +S YFSKN +H
Sbjct: 75  HDGAAMGPGFSCKDHINFFKKRKMIYELLVDDEALEDTASSPVNSPKVCDSNYFSKNPRH 134

Query: 144 KENLITPQVEERSREMDC-----EYTQLKKRGLCLVPLSMVVNYLAE 176
           K  LITPQV+ER    D      EYT+LKKRGLCLVP SM++NY+ +
Sbjct: 135 KGKLITPQVDERRDIGDLIGIGSEYTELKKRGLCLVPFSMIINYMDQ 180

[Close]

BLAST of MC11g0961 vs. ExPASy TrEMBL
Match: A0A6J1CGB1 (uncharacterized protein LOC111010550 OS=Momordica charantia OX=3673 GN=LOC111010550 PE=4 SV=1)

HSP 1 Score: 241 bits (614), Expect = 2.08e-79
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MAKSNSTNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPD 60
           MAKSNSTNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPD
Sbjct: 1   MAKSNSTNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPD 60

Query: 61  DQPHVAPDAASSVVGDNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSP 120
           DQPHVAPDAASSVVGDNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSP
Sbjct: 61  DQPHVAPDAASSVVGDNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSP 120

Query: 121 KV 122
           KV
Sbjct: 121 KV 122

[Close]

BLAST of MC11g0961 vs. ExPASy TrEMBL
Match: A0A6J1FG95 (Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111443646 PE=4 SV=1)

HSP 1 Score: 165 bits (418), Expect = 8.70e-49
Identity = 97/167 (58.08%), Postives = 114/167 (68.26%), Query Frame = 0


Query: 24  GDRSPEESGWTIYFEDFLNSSD--HQQLSSFSSDGVAPDDQPHVAPDAASSVVG------ 83
           GD+S EESGWTIYFEDFLN+    +Q  +SFSS  ++PD    +A DAASSVV       
Sbjct: 15  GDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSFPLSPDQSYPIA-DAASSVVDHKLLEN 74

Query: 84  -DNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSPKVPESTYFSKNQKH 143
            D     PG SCK    F K+R MI EVFV+DE+LEDTASSPVNSPKV +S YFSKN +H
Sbjct: 75  HDGAAMDPGFSCKDHINFFKKRKMIYEVFVDDEALEDTASSPVNSPKVCDSNYFSKNPRH 134

Query: 144 KENLITPQVEERSREMDC-----EYTQLKKRGLCLVPLSMVVNYLAE 176
           K  LITPQV ER    D      EYT+LKKRGLCLVP SM++NY+ +
Sbjct: 135 KGKLITPQVHERREIGDLIGIGSEYTELKKRGLCLVPFSMILNYMDQ 180

[Close]

BLAST of MC11g0961 vs. ExPASy TrEMBL
Match: A0A6J1IHA8 (Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111476942 PE=4 SV=1)

HSP 1 Score: 164 bits (414), Expect = 3.51e-48
Identity = 98/167 (58.68%), Postives = 117/167 (70.06%), Query Frame = 0


Query: 24  GDRSPEESGWTIYFEDFLNSSD--HQQLSSFSSDGVAPDDQPHVAPDAASSVV-----GD 83
           GD+S EESGWTIYFEDFLN+    +Q  +SFSS   +PD    VA DAASSVV     G+
Sbjct: 15  GDQSSEESGWTIYFEDFLNNHHPTNQPPTSFSSYPPSPDQSYPVA-DAASSVVDHKLLGN 74

Query: 84  NDVAV--PGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSPKVPESTYFSKNQKH 143
           +D A   PG SCK    F K+R MI E+ V+DE+LEDTASSPVNSPKV +S YFSKN +H
Sbjct: 75  HDGAAMGPGFSCKDHINFFKKRKMIYELLVDDEALEDTASSPVNSPKVCDSNYFSKNPRH 134

Query: 144 KENLITPQVEERSREMDC-----EYTQLKKRGLCLVPLSMVVNYLAE 176
           K  LITPQV+ER    D      EYT+LKKRGLCLVP SM++NY+ +
Sbjct: 135 KGKLITPQVDERRDIGDLIGIGSEYTELKKRGLCLVPFSMIINYMDQ 180

[Close]

BLAST of MC11g0961 vs. ExPASy TrEMBL
Match: A0A6J1J018 (Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111480691 PE=4 SV=1)

HSP 1 Score: 162 bits (410), Expect = 1.33e-47
Identity = 105/191 (54.97%), Postives = 128/191 (67.02%), Query Frame = 0


Query: 1   MAKSNSTNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLNSSDHQQLSSF---SSDGV 60
           MAK NST+NS             G++SPEESGWTIYF+DFLN++ +   + +   SS  +
Sbjct: 1   MAKENSTSNSVCH---------GGNQSPEESGWTIYFQDFLNTNTNHHPAHYPASSSSHM 60

Query: 61  APDDQPHVAPDAASSVV-----GDNDVAV--PGLSCKVMNGFKKRRMMIKEVFVEDESLE 120
           +PD    VA DAASS+      GDND AV  P LSCK      KRR MIKE+ VEDE+LE
Sbjct: 61  SPDQSYSVA-DAASSIADHKLPGDNDRAVMDPNLSCKDHINLFKRRKMIKELLVEDEALE 120

Query: 121 DTASSPVNSPKVPESTYFSKNQKHKENLITPQVEERSREM-----DCEYTQLKKRGLCLV 176
           DTASSPVNSPKV +ST+FSK+ +H EN I  +V ER REM     + EY +LKKRGLCLV
Sbjct: 121 DTASSPVNSPKVSDSTFFSKSSRHHENQI--KVNER-REMGLVGIESEYKELKKRGLCLV 178

[Close]

BLAST of MC11g0961 vs. ExPASy TrEMBL
Match: A0A6J1FLD8 (Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111446469 PE=4 SV=1)

HSP 1 Score: 159 bits (401), Expect = 2.81e-46
Identity = 103/188 (54.79%), Postives = 122/188 (64.89%), Query Frame = 0


Query: 1   MAKSNSTNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPD 60
           MAK NST+NS             GD+SPEESGWTIYF+DFLN++      + SS   +PD
Sbjct: 1   MAKENSTSNSVCH---------GGDQSPEESGWTIYFQDFLNTNHPAHYPASSSSHPSPD 60

Query: 61  DQPHVAPDAASSVV-----GDNDVAV--PGLSCKVMNGFKKRRMMIKEVFVEDESLEDTA 120
               VA DAASS+      GD++ A   P LSCK      KRR MIKE+ VEDE+LEDTA
Sbjct: 61  QSYSVA-DAASSIADHKLPGDDNRAAMDPNLSCKDHINLFKRRKMIKELLVEDEALEDTA 120

Query: 121 SSPVNSPKVPESTYFSKNQKHKENLITPQVEERSREMDC-----EYTQLKKRGLCLVPLS 176
           SSPVNSPKV ++T+FSKN  H EN I  +V ER REM       EY +LKKRGLCLVPL 
Sbjct: 121 SSPVNSPKVSDATFFSKNSGHNENQI--KVNER-REMGLVGIGNEYKELKKRGLCLVPLC 175

[Close]

BLAST of MC11g0961 vs. TAIR 10
Match: AT5G54790.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G50930.1); Has 53 Blast hits to 53 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.3 bits (155), Expect = 1.1e-10
Identity = 61/174 (35.06%), Postives = 80/174 (45.98%), Query Frame = 0


Query: 6   STNNSQISCSRGRDRSADGDRSPEESGWTIYFEDFLN-SSDHQQLSSFSSDGVAPDDQPH 65
           S+ N+    S+        D++PEES WT+YFEDF   SS    +  FSS  V+      
Sbjct: 3   SSMNNAFIMSKHETAMFTDDQNPEESSWTMYFEDFFEASSSIVDVGDFSSSSVS------ 62

Query: 66  VAPDAASSVVGDNDVAVPGLSCKVMNGFKKRRMMIKEV-FVEDESLEDTASSPVNSPKVP 125
              DAAS V     + V   S +  +    +R   +E+ F     LEDTASSP  SP V 
Sbjct: 63  ---DAASFVATKKTLNV---SKQEGSNLDIKRTRNREIPFGRHHDLEDTASSPSGSPNVY 122

Query: 126 ESTYFSKNQKHKENLITPQVEERSREMDCE---YTQLKKRGLCLVPLSMVVNYL 175
                  N       I    E+R   +  +      LKK+GLCLVPLSMV N+L
Sbjct: 123 SMMNLQDNNTRHGGGIVGDDEKRVSAVPNQGGLPIDLKKKGLCLVPLSMVTNFL 164

[Close]

BLAST of MC11g0961 vs. TAIR 10
Match: AT3G21710.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 57.4 bits (137), Expect = 1.4e-08
Identity = 56/192 (29.17%), Postives = 81/192 (42.19%), Query Frame = 0


Query: 19  DRSADGDRSPEESGWTIYFEDFLN--------SSDHQQLSSFSSDGVAPDDQPHVAPDAA 78
           D  + G    EESGWT Y +DF N         +DHQ  SS+S    +      +  DAA
Sbjct: 26  DHDSHGGDHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTS----LVSDAA 85

Query: 79  SSVVGDNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSPKVPESTYFSK 138
           +         V     K+  G    R   K++  ED+SLEDTASSPVNSPKV    +   
Sbjct: 86  THAFSGKSFPV-NFPAKLKFG----RGRTKKI-CEDDSLEDTASSPVNSPKVSHFEHIQT 145

Query: 139 NQKHKENLITP---------------QVEERSREM--------------DCEYTQLKKRG 174
             +  E+ ++                Q++E   +               +     L+ RG
Sbjct: 146 PPRKIEDYVSSSFVMGNIRGMGDHQIQIQEGGEQKVTLMRNLIDGNNNNNNNNMDLRSRG 205

[Close]

BLAST of MC11g0961 vs. TAIR 10
Match: AT3G21710.1 (unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 7.5e-07
Identity = 47/131 (35.88%), Postives = 60/131 (45.80%), Query Frame = 0


Query: 19  DRSADGDRSPEESGWTIYFEDFLN--------SSDHQQLSSFSSDGVAPDDQPHVAPDAA 78
           D  + G    EESGWT Y +DF N         +DHQ  SS+S    +      +  DAA
Sbjct: 26  DHDSHGGDHQEESGWTTYLDDFSNQYRTTHHEENDHQDKSSYSLLATSTS----LVSDAA 85

Query: 79  SSVVGDNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESLEDTASSPVNSPKVPESTYFSK 138
           +         V     K+  G    R   K++  ED+SLEDTASSPVNSPKV        
Sbjct: 86  THAFSGKSFPV-NFPAKLKFG----RGRTKKI-CEDDSLEDTASSPVNSPKV-------- 136

Query: 139 NQKHKENLITP 142
              H E++ TP
Sbjct: 146 --SHFEHIQTP 136

[Close]

BLAST of MC11g0961 vs. TAIR 10
Match: AT1G50930.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20557.1); Has 215 Blast hits to 213 proteins in 63 species: Archae - 0; Bacteria - 2; Metazoa - 83; Fungi - 10; Plants - 45; Viruses - 5; Other Eukaryotes - 70 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 8.2e-06
Identity = 61/197 (30.96%), Postives = 90/197 (45.69%), Query Frame = 0


Query: 5   NSTNN--SQISCSRGRDRSADGDRSPEESGWTIYFEDFLNSSDHQQLSSFSSDGVAPDDQ 64
           NS NN   Q   S  + R    +   EES W +YFED     D + + +        D+ 
Sbjct: 3   NSVNNCVRQRVFSNHQIRMIHEEEDHEESSWIVYFEDI--DHDDEMVETEGEMTHYYDND 62

Query: 65  PHVAPDAASSV--VGDNDVAVPGLSCKVMNGFKKRRMMIKEVFVEDESL----------E 124
             +  DAAS V     N+V V   +  +    KKRR++ +    E+E L          E
Sbjct: 63  SSMISDAASPVHTTKINNV-VRRKANNINTNPKKRRIIHQHKEEEEEELQKGEEEEEDEE 122

Query: 125 DTASSPVNSPKV-------PESTYFSKNQ----KHKENLITPQVEERSREMDCEYT-QLK 176
           DTASSP N  K+        ++T + K        +   IT    +    M+ E++ +LK
Sbjct: 123 DTASSPSNKTKIFSVLDHANDNTRYGKTMDNVTSEEIGCITETGSKIKEIMNEEFSAELK 182

The following BLAST results are available for this feature:

BLAST of MC11g0961 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5BPG5	1.6e-09	35.06	Vascular-related unknown protein 4 OS=Arabidopsis thaliana OX=3702 GN=VUP4 PE=2 ...	[more]
Q9LSZ3	1.9e-07	29.17	Vascular-related unknown protein 1 OS=Arabidopsis thaliana OX=3702 GN=VUP1 PE=2 ...	[more]
Q9C6I7	1.2e-04	30.96	Vascular-related unknown protein 2 OS=Arabidopsis thaliana OX=3702 GN=VUP2 PE=2 ...	[more]

BLAST of MC11g0961 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139703.1	4.30e-79	100.00	uncharacterized protein LOC111010550 [Momordica charantia]	[more]
XP_038899309.1	2.19e-54	61.26	vascular-related unknown protein 4-like isoform X1 [Benincasa hispida]	[more]
XP_031739077.1	1.39e-48	54.31	vascular-related unknown protein 4 [Cucumis sativus] >KGN58042.2 hypothetical pr...	[more]
XP_022937320.1	1.80e-48	58.08	vascular-related unknown protein 4-like isoform X1 [Cucurbita moschata]	[more]
XP_022976591.1	7.25e-48	58.68	vascular-related unknown protein 4-like isoform X1 [Cucurbita maxima]	[more]

BLAST of MC11g0961 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CGB1	2.08e-79	100.00	uncharacterized protein LOC111010550 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A6J1FG95	8.70e-49	58.08	Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111443646 PE=4 SV=1	[more]
A0A6J1IHA8	3.51e-48	58.68	Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111476942 PE=4 SV=1	[more]
A0A6J1J018	1.33e-47	54.97	Uncharacterized protein OS=Cucurbita maxima OX=3661 GN=LOC111480691 PE=4 SV=1	[more]
A0A6J1FLD8	2.81e-46	54.79	Uncharacterized protein OS=Cucurbita moschata OX=3662 GN=LOC111446469 PE=4 SV=1	[more]

BLAST of MC11g0961 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54790.1	1.1e-10	35.06	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G21710.2	1.4e-08	29.17	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]
AT3G21710.1	7.5e-07	35.88	unknown protein; Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bac...	[more]
AT1G50930.1	8.2e-06	30.96	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..136
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 111..136
None	No IPR available	PANTHER	PTHR33974:SF2	VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED	coord: 5..174
IPR039280	VASCULAR-RELATED UNKNOWN PROTEIN	PANTHER	PTHR33974	VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED	coord: 5..174

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g0961.1	MC11g0961.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010089	xylem development