MC11g0883 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0883
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	E3 ubiquitin-protein ligase RMA3-like
Location	MC11: 7502908 .. 7503959 (+)
RNA-Seq Expression	MC11g0883
Synteny	MC11g0883

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACAAACCTACACCACGCCCGAGGCATACTTTGAGTCTGAACAAGATGTGTCTCTCAAACAAAACTGGAAATCCATCTCATCACAGCCAACAGTCTCAGACGATGCGCACGGTTGCTTCGATTGCAACATTTGCTTAGACTCGGCAGCGGAGCCTGTCGTCACCCTCTGTGGTCACCTCTACTGCTGGCCATGCATTTACAAGTGGCTTAACGTACAAATCTCCAGCAATGAACCTGAGAACGTGCAGAACTGCCCCGTTTGTAAGGCTAGCATCACCCCCTCCTCTTTAGTTCCCCTCTATGGCCGTGGCAAGTCGAACACGGATTCTGAATCCAAGAAGTCTCACTTGGGTGTGGCTGTGCCTCGAAGGCCACCGCCATCTGCAACTAACACACTGCACAATTCCAATGCAACCTCTGCATTGCATCCAAGCCAGGACCTCCATCCAAATTACACCCGCTCACCCTCGCACCCGATCTATCACCAACAATACTTCCCCCAGGCCTATGGTGACATTGCGACATACACACCGTCTTATCTGGGTAATGCCGTGATAACAAGTCTGTTAAACCCAACGATTGGGATGTTTGGAGAAACGGTTTTCACGAGAATTTTCGGTAGCGTGGATTCGAACTTGTTGCCATACCCGCCTTACAACAACTCCATCCCAGGAAATGGAAGTAGCAGAATGAGAAGGCAGGAAATGCAGCTTGATAAGTCTCTTAATAGAGTTTCAATCTTTCTATTTTGCTGCTTTATTATCTGCCTTTTGTTGTTTTGAACTTGGCAATCGAGTTGTATGTATGGAGAACCACATGATATAAAGATCAAGCTCTAGTAAATTTTGCTGGATGATTTTACTGTGACAGTCGTCTACATATATGTACATAATGTTTTTTTTTCTTCCGGGAGAAATTATGTACATAATGTTAGCTAATATCACTCATTATTTTGTAATTTCGTCTGGTGTATGTGTGGATTGCCATTTCTTCCCCAGTGAATTAAGAATTGAGAAGTTCGAATGAGGAAGAGTTATATAAATTTGAG

mRNA sequence

ATGGAACAAACCTACACCACGCCCGAGGCATACTTTGAGTCTGAACAAGATGTGTCTCTCAAACAAAACTGGAAATCCATCTCATCACAGCCAACAGTCTCAGACGATGCGCACGGTTGCTTCGATTGCAACATTTGCTTAGACTCGGCAGCGGAGCCTGTCGTCACCCTCTGTGGTCACCTCTACTGCTGGCCATGCATTTACAAGTGGCTTAACGTACAAATCTCCAGCAATGAACCTGAGAACGTGCAGAACTGCCCCGTTTGTAAGGCTAGCATCACCCCCTCCTCTTTAGTTCCCCTCTATGGCCGTGGCAAGTCGAACACGGATTCTGAATCCAAGAAGTCTCACTTGGGTGTGGCTGTGCCTCGAAGGCCACCGCCATCTGCAACTAACACACTGCACAATTCCAATGCAACCTCTGCATTGCATCCAAGCCAGGACCTCCATCCAAATTACACCCGCTCACCCTCGCACCCGATCTATCACCAACAATACTTCCCCCAGGCCTATGGTGACATTGCGACATACACACCGTCTTATCTGGGTAATGCCGTGATAACAAGTCTGTTAAACCCAACGATTGGGATGTTTGGAGAAACGGTTTTCACGAGAATTTTCGGTAGCGTGGATTCGAACTTGTTGCCATACCCGCCTTACAACAACTCCATCCCAGGAAATGGAAGTAGCAGAATGAGAAGGCAGGAAATGCAGCTTGATAAGTCTCTTAATAGAGTTTCAATCTTTCTATTTTGCTGCTTTATTATCTGCCTTTTGTTGTTTTGAACTTGGCAATCGAGTTGTATGTATGGAGAACCACATGATATAAAGATCAAGCTCTAGTAAATTTTGCTGGATGATTTTACTGTGACAGTCGTCTACATATATGTACATAATGTTTTTTTTTCTTCCGGGAGAAATTATGTACATAATGTTAGCTAATATCACTCATTATTTTGTAATTTCGTCTGGTGTATGTGTGGATTGCCATTTCTTCCCCAGTGAATTAAGAATTGAGAAGTTCGAATGAGGAAGAGTTATATAAATTTGAG

Coding sequence (CDS)

ATGGAACAAACCTACACCACGCCCGAGGCATACTTTGAGTCTGAACAAGATGTGTCTCTCAAACAAAACTGGAAATCCATCTCATCACAGCCAACAGTCTCAGACGATGCGCACGGTTGCTTCGATTGCAACATTTGCTTAGACTCGGCAGCGGAGCCTGTCGTCACCCTCTGTGGTCACCTCTACTGCTGGCCATGCATTTACAAGTGGCTTAACGTACAAATCTCCAGCAATGAACCTGAGAACGTGCAGAACTGCCCCGTTTGTAAGGCTAGCATCACCCCCTCCTCTTTAGTTCCCCTCTATGGCCGTGGCAAGTCGAACACGGATTCTGAATCCAAGAAGTCTCACTTGGGTGTGGCTGTGCCTCGAAGGCCACCGCCATCTGCAACTAACACACTGCACAATTCCAATGCAACCTCTGCATTGCATCCAAGCCAGGACCTCCATCCAAATTACACCCGCTCACCCTCGCACCCGATCTATCACCAACAATACTTCCCCCAGGCCTATGGTGACATTGCGACATACACACCGTCTTATCTGGGTAATGCCGTGATAACAAGTCTGTTAAACCCAACGATTGGGATGTTTGGAGAAACGGTTTTCACGAGAATTTTCGGTAGCGTGGATTCGAACTTGTTGCCATACCCGCCTTACAACAACTCCATCCCAGGAAATGGAAGTAGCAGAATGAGAAGGCAGGAAATGCAGCTTGATAAGTCTCTTAATAGAGTTTCAATCTTTCTATTTTGCTGCTTTATTATCTGCCTTTTGTTGTTTTGA

Protein sequence

MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGVAVPRRPPPSATNTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF

Homology

[Close]

BLAST of MC11g0883 vs. ExPASy Swiss-Prot
Match: Q8GUK7 (E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.9e-48
Identity = 117/241 (48.55%), Postives = 154/241 (63.90%), Query Frame = 0


Query: 26  SISSQPTVSD-DAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISS-NEPENV 85
           ++++ PT    +  GCFDCNICLD+A +PVVTLCGHL+CWPCIYKWL+VQ+SS +  ++ 
Sbjct: 26  NLTTAPTAGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQ 85

Query: 86  QNCPVCKASITPSSLVPLYGRGKSNTDS---ESKKSHLGVAVPRRPPPSATNTLHNSNAT 145
            NCPVCK++IT +SLVPLYGRG S+  S     K+  L   +PRRP PSA    +   + 
Sbjct: 86  NNCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALR--NPITSA 145

Query: 146 SALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGE 205
           S+L+PS     + T SPS   ++ QY P+ +    T   + L NAV+ S L P IGMFG+
Sbjct: 146 SSLNPSLQ---HQTLSPS--FHNHQYSPRGF---TTTESTDLANAVMMSFLYPVIGMFGD 205

Query: 206 TVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLL 262
            V+TRIFG+  + +    PY        S RM    MQ +KSLNRVSIF  CC I+CLLL
Sbjct: 206 LVYTRIFGTFTNTIA--QPYQ-------SQRM----MQREKSLNRVSIFFLCCIILCLLL 243

[Close]

BLAST of MC11g0883 vs. ExPASy Swiss-Prot
Match: Q6R567 (E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 4.2e-43
Identity = 104/250 (41.60%), Postives = 142/250 (56.80%), Query Frame = 0


Query: 24  WKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENV 83
           WKS++ +  V ++  G FDCNICLD   EPV+TLCGHLYCWPCIYKW+  Q  S+E  + 
Sbjct: 24  WKSMNDE--VEENISGGFDCNICLDCVHEPVITLCGHLYCWPCIYKWIYFQSVSSENSDQ 83

Query: 84  Q--NCPVCKASITPSSLVPLYGR-GKSNTDSESKKSHLGVAVPRRPPPSATNTLHNSNAT 143
           Q   CPVCKA ++  +L+PLYGR G+S   SE K  +LG+ +P+RPP             
Sbjct: 84  QQPQCPVCKAEVSEKTLIPLYGRGGQSTKPSEGKAPNLGIVIPQRPP------------- 143

Query: 144 SALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNP------- 203
           S       L P    +PS  +  + Y  Q+     T  P+Y G+ + + +L+P       
Sbjct: 144 SPRCGGHFLLPTTDSNPSQLLQRRGYQQQS----QTRQPAYQGSYMSSPMLSPGGATANM 203

Query: 204 -TIGMFGETVFTRIFGSVDSNLLPYP-PYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLF 262
               M GE  + RIFG+  + +  YP  YN +I  + S RMRRQ  Q D+SL R+  FLF
Sbjct: 204 LQHSMIGEVAYARIFGNSSTTMYTYPNSYNLAI--SSSPRMRRQLSQADRSLGRICFFLF 252

[Close]

BLAST of MC11g0883 vs. ExPASy Swiss-Prot
Match: O64425 (E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 9.7e-40
Identity = 102/232 (43.97%), Postives = 143/232 (61.64%), Query Frame = 0


Query: 34  SDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQ--ISSNEPENVQNCPVCKA 93
           +DD++  FDCNICLDS  EPVVTLCGHL+CWPCI+KWL+VQ   +S+E +  + CPVCK+
Sbjct: 41  TDDSN--FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKS 100

Query: 94  SITPSSLVPLYGRGKSNTDSESKKSHLGVAVPRRP--PPSATNTLHNSNATSALHPSQDL 153
            ++ S+LVPLYGRG+  T  E K S     VP+RP  P       ++  A++ L  SQ +
Sbjct: 101 KVSHSTLVPLYGRGRCTTQEEGKNS-----VPKRPVGPVYRLEMPNSPYASTDLRLSQRV 160

Query: 154 HPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGETVFTRIFGS 213
           H N   SP      + Y+P + G +++ + SY      +++L+P + M GE V TR+FG+
Sbjct: 161 HFN---SP-----QEGYYPVS-GVMSSNSLSY------SAVLDPVMVMVGEMVATRLFGT 220

Query: 214 VDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF 262
              +   YP   N + G    RMRR+ MQ DKSL R+  F  CC ++CLLLF
Sbjct: 221 RVMDRFAYPDTYN-LAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

[Close]

BLAST of MC11g0883 vs. ExPASy Swiss-Prot
Match: P93030 (E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 9.4e-27
Identity = 80/235 (34.04%), Postives = 114/235 (48.51%), Query Frame = 0


Query: 36  DAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQ---------NC 95
           D+ G FDCNICLD   +PVVTLCGHL+CWPCI+KW     S+N  + V           C
Sbjct: 14  DSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKW--TYASNNSRQRVDQYDHKREPPKC 73

Query: 96  PVCKASITPSSLVPLYGRGKSNTDSESKKSHLGVAVPRRPPPSATNTLHNSNATSALHPS 155
           PVCK+ ++ ++LVP+YGRG                  ++ P S +N            PS
Sbjct: 74  PVCKSDVSEATLVPIYGRG------------------QKAPQSGSNV-----------PS 133

Query: 156 QDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGETVFTRI 215
           +         P+ P+Y  +   Q  G+  +    Y        + +P +G+  E V+ R+
Sbjct: 134 R---------PTGPVYDLRGVGQRLGEGESQRYMY-------RMPDPVMGVVCEMVYRRL 193

Query: 216 FGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF 262
           FG   SN+ PY   N         R RR+ MQ ++SL+RV +FL C   +CL LF
Sbjct: 194 FGESSSNMAPYRDMN--------VRSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

[Close]

BLAST of MC11g0883 vs. ExPASy Swiss-Prot
Match: Q09463 (E3 ubiquitin ligase rnf-5 OS=Caenorhabditis elegans OX=6239 GN=rnf-5 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.2e-18
Identity = 46/108 (42.59%), Postives = 65/108 (60.19%), Query Frame = 0


Query: 25  KSISSQPTVSD--DAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPEN 84
           K+ S +PT S   D    F+CNICLD+A + VV+LCGHL+CWPC+ +WL+ +       N
Sbjct: 6   KAPSEEPTSSSNKDESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTR------PN 65

Query: 85  VQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGVAVPRRPPPSA 131
            Q CPVCK++I  + +VP+YGRG  ++D   K           PPP +
Sbjct: 66  NQVCPVCKSAIDGNKVVPIYGRGGDSSDPRKKVPPRPKGQRSEPPPQS 107

[Close]

BLAST of MC11g0883 vs. NCBI nr
Match: XP_022139659.1 (E3 ubiquitin-protein ligase RMA3-like [Momordica charantia])

HSP 1 Score: 539 bits (1389), Expect = 1.28e-193
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0


Query: 1   MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGH 60
           MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGH
Sbjct: 1   MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGH 60

Query: 61  LYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGV 120
           LYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGV
Sbjct: 61  LYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGV 120

Query: 121 AVPRRPPPSATNTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPS 180
           AVPRRPPPSATNTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPS
Sbjct: 121 AVPRRPPPSATNTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPS 180

Query: 181 YLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLD 240
           YLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLD
Sbjct: 181 YLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLD 240

Query: 241 KSLNRVSIFLFCCFIICLLLF 261
           KSLNRVSIFLFCCFIICLLLF
Sbjct: 241 KSLNRVSIFLFCCFIICLLLF 261

[Close]

BLAST of MC11g0883 vs. NCBI nr
Match: XP_038899693.1 (E3 ubiquitin-protein ligase RMA3 [Benincasa hispida])

HSP 1 Score: 474 bits (1219), Expect = 1.18e-167
Identity = 232/265 (87.55%), Postives = 244/265 (92.08%), Query Frame = 0


Query: 1   MEQTYTTP----EAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVT 60
           MEQ Y+ P    EAY ESEQDVSLKQNWKSIS+Q TVS+DA+GCFDCNICLDSAAEPVVT
Sbjct: 1   MEQNYSVPHSVSEAYLESEQDVSLKQNWKSISTQSTVSEDANGCFDCNICLDSAAEPVVT 60

Query: 61  LCGHLYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKS 120
           LCGHLYCWPCIYKWL+VQISSN PEN QNCPVCKASITPSSLVPLYGRG SN+DSESKKS
Sbjct: 61  LCGHLYCWPCIYKWLHVQISSNRPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKS 120

Query: 121 HLGVAVPRRPPPSATNTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIAT 180
           HLG+ VPRRPPPS  NT  +SNATSALHPSQ+LHPNY RSPSHPIYHQQYFPQAYGD A+
Sbjct: 121 HLGMVVPRRPPPSM-NTPPHSNATSALHPSQELHPNYVRSPSHPIYHQQYFPQAYGDFAS 180

Query: 181 YTPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQE 240
           Y PSYLGNAVITSLLNPTIGMFGETVFTRIFGSVD NLLPYPPYNN+IPGN S+RMRRQE
Sbjct: 181 YAPSYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNNAIPGNASTRMRRQE 240

Query: 241 MQLDKSLNRVSIFLFCCFIICLLLF 261
           MQLDKSLNRVSIFLFCCFIICLLLF
Sbjct: 241 MQLDKSLNRVSIFLFCCFIICLLLF 264

[Close]

BLAST of MC11g0883 vs. NCBI nr
Match: XP_008452467.1 (PREDICTED: E3 ubiquitin-protein ligase RMA3 [Cucumis melo] >KAA0064336.1 E3 ubiquitin-protein ligase RMA3 [Cucumis melo var. makuwa] >TYK20251.1 E3 ubiquitin-protein ligase RMA3 [Cucumis melo var. makuwa])

HSP 1 Score: 464 bits (1195), Expect = 4.64e-164
Identity = 225/261 (86.21%), Postives = 242/261 (92.72%), Query Frame = 0


Query: 1   MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGH 60
           MEQ Y+ PEAY ESEQDVSLKQNWKSIS++ T+S+DA+GCFDCNICLDSAA+PVVTLCGH
Sbjct: 1   MEQNYSVPEAYLESEQDVSLKQNWKSISTESTISEDANGCFDCNICLDSAADPVVTLCGH 60

Query: 61  LYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGV 120
           LYCWPCIYKWL+VQISSNEPEN QNCPVCKASITPSSLVPLYGRG SN+DSESKKSHLG+
Sbjct: 61  LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120

Query: 121 AVPRRPPPSATNTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPS 180
           AVPRRPPPS  NT   SN++SA +PSQ+LH NY RSPSHPIYHQQYFPQAYG+ A+Y PS
Sbjct: 121 AVPRRPPPSM-NTPPPSNSSSASYPSQELHSNYIRSPSHPIYHQQYFPQAYGNFASYAPS 180

Query: 181 YLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLD 240
           YLGNAVITSLLNPTIGMFGETVFTRIFGSVD NLLPYPPYNNSI GN S+RMRRQEMQLD
Sbjct: 181 YLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNNSISGNASTRMRRQEMQLD 240

Query: 241 KSLNRVSIFLFCCFIICLLLF 261
           KSLNRVSIFLFCCFIICLLLF
Sbjct: 241 KSLNRVSIFLFCCFIICLLLF 260

[Close]

BLAST of MC11g0883 vs. NCBI nr
Match: XP_004141226.1 (E3 ubiquitin-protein ligase RMA3 [Cucumis sativus] >KGN55135.1 hypothetical protein Csa_012256 [Cucumis sativus])

HSP 1 Score: 461 bits (1185), Expect = 1.61e-162
Identity = 225/262 (85.88%), Postives = 243/262 (92.75%), Query Frame = 0


Query: 1   MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGH 60
           MEQ Y+ PEAY ESEQDVSLKQNWKSIS+Q T+S+DA+GCFDCNICLDSAA+PVVTLCGH
Sbjct: 1   MEQNYSVPEAYLESEQDVSLKQNWKSISTQSTISEDANGCFDCNICLDSAADPVVTLCGH 60

Query: 61  LYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGV 120
           LYCWPCIYKWL+VQISSNEPEN QNCPVCKASITPSSLVPLYGRG SN+DSESKKSHLG+
Sbjct: 61  LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120

Query: 121 AVPRRPPPSATNTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQA-YGDIATYTP 180
           AVPRRPPPS  NT  +SN++S L+PSQ+LH NY RSPSHPIYHQQYFPQA YG+ A+Y+P
Sbjct: 121 AVPRRPPPSM-NTPSHSNSSSTLYPSQELHSNYIRSPSHPIYHQQYFPQATYGNFASYSP 180

Query: 181 SYLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQL 240
           SYLGNAVITSLLNPTIGMFGETVFTRIFGSVD NLLPY PYNNSI GN S+RMRRQEMQL
Sbjct: 181 SYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYSPYNNSISGNASTRMRRQEMQL 240

Query: 241 DKSLNRVSIFLFCCFIICLLLF 261
           DKSLNRVSIFLFCCFIICLLLF
Sbjct: 241 DKSLNRVSIFLFCCFIICLLLF 261

[Close]

BLAST of MC11g0883 vs. NCBI nr
Match: XP_023521850.1 (E3 ubiquitin-protein ligase RMA3-like [Cucurbita pepo subsp. pepo] >XP_023521858.1 E3 ubiquitin-protein ligase RMA3-like [Cucurbita pepo subsp. pepo] >KAG6607875.1 E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037404.1 E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 446 bits (1146), Expect = 1.36e-156
Identity = 213/261 (81.61%), Postives = 236/261 (90.42%), Query Frame = 0


Query: 1   MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGH 60
           M+QTY++PEAY ESEQDVSLKQNWKS+S+Q TVS+DA+GCFDCNICLDSAA+PVVTLCGH
Sbjct: 1   MDQTYSSPEAYLESEQDVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGH 60

Query: 61  LYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGV 120
           L+CWPCIYKW +VQISSNE EN  NCPVCKASITPSSLVPLYGRGKS +DSESKKSHLG+
Sbjct: 61  LFCWPCIYKWFHVQISSNETENTHNCPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGI 120

Query: 121 AVPRRPPPSATNTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPS 180
            VPRRPPPS  NT  +SNA SALHPS++LHPNY RSP H IYHQQYFPQAYG+ A Y PS
Sbjct: 121 TVPRRPPPSM-NTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPS 180

Query: 181 YLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLD 240
           YLGNA++TSLLNPTIG+ GETV+TRIFGS D NLLPYPPYN+S+ GN  +RMRRQEMQLD
Sbjct: 181 YLGNAMVTSLLNPTIGLIGETVYTRIFGSADGNLLPYPPYNHSVAGNVGTRMRRQEMQLD 240

Query: 241 KSLNRVSIFLFCCFIICLLLF 261
           KSLNRVSIFLFCCFIICLLLF
Sbjct: 241 KSLNRVSIFLFCCFIICLLLF 260

[Close]

BLAST of MC11g0883 vs. ExPASy TrEMBL
Match: A0A6J1CDN1 (E3 ubiquitin-protein ligase RMA3-like OS=Momordica charantia OX=3673 GN=LOC111010508 PE=4 SV=1)

HSP 1 Score: 539 bits (1389), Expect = 6.22e-194
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0


Query: 1   MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGH 60
           MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGH
Sbjct: 1   MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGH 60

Query: 61  LYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGV 120
           LYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGV
Sbjct: 61  LYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGV 120

Query: 121 AVPRRPPPSATNTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPS 180
           AVPRRPPPSATNTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPS
Sbjct: 121 AVPRRPPPSATNTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPS 180

Query: 181 YLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLD 240
           YLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLD
Sbjct: 181 YLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLD 240

Query: 241 KSLNRVSIFLFCCFIICLLLF 261
           KSLNRVSIFLFCCFIICLLLF
Sbjct: 241 KSLNRVSIFLFCCFIICLLLF 261

[Close]

BLAST of MC11g0883 vs. ExPASy TrEMBL
Match: A0A5A7VD79 (E3 ubiquitin-protein ligase RMA3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G003900 PE=4 SV=1)

HSP 1 Score: 464 bits (1195), Expect = 2.25e-164
Identity = 225/261 (86.21%), Postives = 242/261 (92.72%), Query Frame = 0


Query: 1   MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGH 60
           MEQ Y+ PEAY ESEQDVSLKQNWKSIS++ T+S+DA+GCFDCNICLDSAA+PVVTLCGH
Sbjct: 1   MEQNYSVPEAYLESEQDVSLKQNWKSISTESTISEDANGCFDCNICLDSAADPVVTLCGH 60

Query: 61  LYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGV 120
           LYCWPCIYKWL+VQISSNEPEN QNCPVCKASITPSSLVPLYGRG SN+DSESKKSHLG+
Sbjct: 61  LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120

Query: 121 AVPRRPPPSATNTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPS 180
           AVPRRPPPS  NT   SN++SA +PSQ+LH NY RSPSHPIYHQQYFPQAYG+ A+Y PS
Sbjct: 121 AVPRRPPPSM-NTPPPSNSSSASYPSQELHSNYIRSPSHPIYHQQYFPQAYGNFASYAPS 180

Query: 181 YLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLD 240
           YLGNAVITSLLNPTIGMFGETVFTRIFGSVD NLLPYPPYNNSI GN S+RMRRQEMQLD
Sbjct: 181 YLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNNSISGNASTRMRRQEMQLD 240

Query: 241 KSLNRVSIFLFCCFIICLLLF 261
           KSLNRVSIFLFCCFIICLLLF
Sbjct: 241 KSLNRVSIFLFCCFIICLLLF 260

[Close]

BLAST of MC11g0883 vs. ExPASy TrEMBL
Match: A0A1S3BTX0 (E3 ubiquitin-protein ligase RMA3 OS=Cucumis melo OX=3656 GN=LOC103493490 PE=4 SV=1)

HSP 1 Score: 464 bits (1195), Expect = 2.25e-164
Identity = 225/261 (86.21%), Postives = 242/261 (92.72%), Query Frame = 0


Query: 1   MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGH 60
           MEQ Y+ PEAY ESEQDVSLKQNWKSIS++ T+S+DA+GCFDCNICLDSAA+PVVTLCGH
Sbjct: 1   MEQNYSVPEAYLESEQDVSLKQNWKSISTESTISEDANGCFDCNICLDSAADPVVTLCGH 60

Query: 61  LYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGV 120
           LYCWPCIYKWL+VQISSNEPEN QNCPVCKASITPSSLVPLYGRG SN+DSESKKSHLG+
Sbjct: 61  LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120

Query: 121 AVPRRPPPSATNTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPS 180
           AVPRRPPPS  NT   SN++SA +PSQ+LH NY RSPSHPIYHQQYFPQAYG+ A+Y PS
Sbjct: 121 AVPRRPPPSM-NTPPPSNSSSASYPSQELHSNYIRSPSHPIYHQQYFPQAYGNFASYAPS 180

Query: 181 YLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLD 240
           YLGNAVITSLLNPTIGMFGETVFTRIFGSVD NLLPYPPYNNSI GN S+RMRRQEMQLD
Sbjct: 181 YLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYPPYNNSISGNASTRMRRQEMQLD 240

Query: 241 KSLNRVSIFLFCCFIICLLLF 261
           KSLNRVSIFLFCCFIICLLLF
Sbjct: 241 KSLNRVSIFLFCCFIICLLLF 260

[Close]

BLAST of MC11g0883 vs. ExPASy TrEMBL
Match: A0A0A0KZN0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G637750 PE=4 SV=1)

HSP 1 Score: 461 bits (1185), Expect = 7.79e-163
Identity = 225/262 (85.88%), Postives = 243/262 (92.75%), Query Frame = 0


Query: 1   MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGH 60
           MEQ Y+ PEAY ESEQDVSLKQNWKSIS+Q T+S+DA+GCFDCNICLDSAA+PVVTLCGH
Sbjct: 1   MEQNYSVPEAYLESEQDVSLKQNWKSISTQSTISEDANGCFDCNICLDSAADPVVTLCGH 60

Query: 61  LYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGV 120
           LYCWPCIYKWL+VQISSNEPEN QNCPVCKASITPSSLVPLYGRG SN+DSESKKSHLG+
Sbjct: 61  LYCWPCIYKWLHVQISSNEPENTQNCPVCKASITPSSLVPLYGRGTSNSDSESKKSHLGM 120

Query: 121 AVPRRPPPSATNTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQA-YGDIATYTP 180
           AVPRRPPPS  NT  +SN++S L+PSQ+LH NY RSPSHPIYHQQYFPQA YG+ A+Y+P
Sbjct: 121 AVPRRPPPSM-NTPSHSNSSSTLYPSQELHSNYIRSPSHPIYHQQYFPQATYGNFASYSP 180

Query: 181 SYLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQL 240
           SYLGNAVITSLLNPTIGMFGETVFTRIFGSVD NLLPY PYNNSI GN S+RMRRQEMQL
Sbjct: 181 SYLGNAVITSLLNPTIGMFGETVFTRIFGSVDGNLLPYSPYNNSISGNASTRMRRQEMQL 240

Query: 241 DKSLNRVSIFLFCCFIICLLLF 261
           DKSLNRVSIFLFCCFIICLLLF
Sbjct: 241 DKSLNRVSIFLFCCFIICLLLF 261

[Close]

BLAST of MC11g0883 vs. ExPASy TrEMBL
Match: A0A6J1FI46 (E3 ubiquitin-protein ligase RMA3-like OS=Cucurbita moschata OX=3662 GN=LOC111445968 PE=4 SV=1)

HSP 1 Score: 438 bits (1126), Expect = 7.33e-154
Identity = 210/261 (80.46%), Postives = 234/261 (89.66%), Query Frame = 0


Query: 1   MEQTYTTPEAYFESEQDVSLKQNWKSISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGH 60
           M+QTY++PEAY ESEQDVSLKQNWKS+S+Q TVS+DA+GCFDCNICLDSAA+PVVTLCGH
Sbjct: 1   MDQTYSSPEAYLESEQDVSLKQNWKSMSAQSTVSEDANGCFDCNICLDSAADPVVTLCGH 60

Query: 61  LYCWPCIYKWLNVQISSNEPENVQNCPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGV 120
           L+CWPCIYKW +VQISS E EN  NCPVCKASITPSSLVPLYGRGKS +DSESKKSHLG+
Sbjct: 61  LFCWPCIYKWFHVQISSIETENTHNCPVCKASITPSSLVPLYGRGKSYSDSESKKSHLGI 120

Query: 121 AVPRRPPPSATNTLHNSNATSALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPS 180
            VPRRPPPS  NT  +SNA SALHPS++LHPNY RSP H IYHQQYFPQAYG+ A Y PS
Sbjct: 121 TVPRRPPPSM-NTPPHSNAASALHPSEELHPNYIRSPLHRIYHQQYFPQAYGNFAPYAPS 180

Query: 181 YLGNAVITSLLNPTIGMFGETVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLD 240
           YLGNA++TSLLNPTIG+ GETV+TRIFGS D +LLPYPPYN+ + GN  +RMRRQEMQLD
Sbjct: 181 YLGNAMVTSLLNPTIGLIGETVYTRIFGSADGSLLPYPPYNHLVAGNVGTRMRRQEMQLD 240

Query: 241 KSLNRVSIFLFCCFIICLLLF 261
           KSLNRVSIFLFCCFIICLLLF
Sbjct: 241 KSLNRVSIFLFCCFIICLLLF 260

[Close]

BLAST of MC11g0883 vs. TAIR 10
Match: AT4G27470.1 (RING membrane-anchor 3 )

HSP 1 Score: 194.1 bits (492), Expect = 1.4e-49
Identity = 117/241 (48.55%), Postives = 154/241 (63.90%), Query Frame = 0


Query: 26  SISSQPTVSD-DAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISS-NEPENV 85
           ++++ PT    +  GCFDCNICLD+A +PVVTLCGHL+CWPCIYKWL+VQ+SS +  ++ 
Sbjct: 26  NLTTAPTAGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQ 85

Query: 86  QNCPVCKASITPSSLVPLYGRGKSNTDS---ESKKSHLGVAVPRRPPPSATNTLHNSNAT 145
            NCPVCK++IT +SLVPLYGRG S+  S     K+  L   +PRRP PSA    +   + 
Sbjct: 86  NNCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALR--NPITSA 145

Query: 146 SALHPSQDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGE 205
           S+L+PS     + T SPS   ++ QY P+ +    T   + L NAV+ S L P IGMFG+
Sbjct: 146 SSLNPSLQ---HQTLSPS--FHNHQYSPRGF---TTTESTDLANAVMMSFLYPVIGMFGD 205

Query: 206 TVFTRIFGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLL 262
            V+TRIFG+  + +    PY        S RM    MQ +KSLNRVSIF  CC I+CLLL
Sbjct: 206 LVYTRIFGTFTNTIA--QPYQ-------SQRM----MQREKSLNRVSIFFLCCIILCLLL 243

[Close]

BLAST of MC11g0883 vs. TAIR 10
Match: AT4G03510.1 (RING membrane-anchor 1 )

HSP 1 Score: 165.2 bits (417), Expect = 6.9e-41
Identity = 102/232 (43.97%), Postives = 143/232 (61.64%), Query Frame = 0


Query: 34  SDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQ--ISSNEPENVQNCPVCKA 93
           +DD++  FDCNICLDS  EPVVTLCGHL+CWPCI+KWL+VQ   +S+E +  + CPVCK+
Sbjct: 41  TDDSN--FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKS 100

Query: 94  SITPSSLVPLYGRGKSNTDSESKKSHLGVAVPRRP--PPSATNTLHNSNATSALHPSQDL 153
            ++ S+LVPLYGRG+  T  E K S     VP+RP  P       ++  A++ L  SQ +
Sbjct: 101 KVSHSTLVPLYGRGRCTTQEEGKNS-----VPKRPVGPVYRLEMPNSPYASTDLRLSQRV 160

Query: 154 HPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGETVFTRIFGS 213
           H N   SP      + Y+P + G +++ + SY      +++L+P + M GE V TR+FG+
Sbjct: 161 HFN---SP-----QEGYYPVS-GVMSSNSLSY------SAVLDPVMVMVGEMVATRLFGT 220

Query: 214 VDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF 262
              +   YP   N + G    RMRR+ MQ DKSL R+  F  CC ++CLLLF
Sbjct: 221 RVMDRFAYPDTYN-LAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

[Close]

BLAST of MC11g0883 vs. TAIR 10
Match: AT4G03510.2 (RING membrane-anchor 1 )

HSP 1 Score: 165.2 bits (417), Expect = 6.9e-41
Identity = 102/232 (43.97%), Postives = 143/232 (61.64%), Query Frame = 0


Query: 34  SDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQ--ISSNEPENVQNCPVCKA 93
           +DD++  FDCNICLDS  EPVVTLCGHL+CWPCI+KWL+VQ   +S+E +  + CPVCK+
Sbjct: 41  TDDSN--FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKS 100

Query: 94  SITPSSLVPLYGRGKSNTDSESKKSHLGVAVPRRP--PPSATNTLHNSNATSALHPSQDL 153
            ++ S+LVPLYGRG+  T  E K S     VP+RP  P       ++  A++ L  SQ +
Sbjct: 101 KVSHSTLVPLYGRGRCTTQEEGKNS-----VPKRPVGPVYRLEMPNSPYASTDLRLSQRV 160

Query: 154 HPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGETVFTRIFGS 213
           H N   SP      + Y+P + G +++ + SY      +++L+P + M GE V TR+FG+
Sbjct: 161 HFN---SP-----QEGYYPVS-GVMSSNSLSY------SAVLDPVMVMVGEMVATRLFGT 220

Query: 214 VDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF 262
              +   YP   N + G    RMRR+ MQ DKSL R+  F  CC ++CLLLF
Sbjct: 221 RVMDRFAYPDTYN-LAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

[Close]

BLAST of MC11g0883 vs. TAIR 10
Match: AT4G28270.1 (RING membrane-anchor 2 )

HSP 1 Score: 122.1 bits (305), Expect = 6.7e-28
Identity = 80/235 (34.04%), Postives = 114/235 (48.51%), Query Frame = 0


Query: 36  DAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQ---------NC 95
           D+ G FDCNICLD   +PVVTLCGHL+CWPCI+KW     S+N  + V           C
Sbjct: 14  DSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKW--TYASNNSRQRVDQYDHKREPPKC 73

Query: 96  PVCKASITPSSLVPLYGRGKSNTDSESKKSHLGVAVPRRPPPSATNTLHNSNATSALHPS 155
           PVCK+ ++ ++LVP+YGRG                  ++ P S +N            PS
Sbjct: 74  PVCKSDVSEATLVPIYGRG------------------QKAPQSGSNV-----------PS 133

Query: 156 QDLHPNYTRSPSHPIYHQQYFPQAYGDIATYTPSYLGNAVITSLLNPTIGMFGETVFTRI 215
           +         P+ P+Y  +   Q  G+  +    Y        + +P +G+  E V+ R+
Sbjct: 134 R---------PTGPVYDLRGVGQRLGEGESQRYMY-------RMPDPVMGVVCEMVYRRL 193

Query: 216 FGSVDSNLLPYPPYNNSIPGNGSSRMRRQEMQLDKSLNRVSIFLFCCFIICLLLF 262
           FG   SN+ PY   N         R RR+ MQ ++SL+RV +FL C   +CL LF
Sbjct: 194 FGESSSNMAPYRDMN--------VRSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

[Close]

BLAST of MC11g0883 vs. TAIR 10
Match: AT1G74990.1 (RING/U-box superfamily protein )

HSP 1 Score: 114.4 bits (285), Expect = 1.4e-25
Identity = 55/108 (50.93%), Postives = 70/108 (64.81%), Query Frame = 0


Query: 26  SISSQPTVSDDAHGCFDCNICLDSAAEPVVTLCGHLYCWPCIYKWLNVQISSNEPENVQN 85
           +I++     DDA   F CNICL+ A EP+VTLCGHL+CWPC+YKWL+    SN      +
Sbjct: 2   AINTITNEEDDASNNFGCNICLELAREPIVTLCGHLFCWPCLYKWLHYHSKSN------H 61

Query: 86  CPVCKASITPSSLVPLYGRGKSNTDSESKKSHLGVAVPRRPPPSATNT 134
           CPVCKA +   +LVPLYG GK ++D  SK +  GV VP RP  + T T
Sbjct: 62  CPVCKALVKEDTLVPLYGMGKPSSDPRSKLNS-GVTVPNRPAATRTET 102

The following BLAST results are available for this feature:

BLAST of MC11g0883 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GUK7	1.9e-48	48.55	E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV...	[more]
Q6R567	4.2e-43	41.60	E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=...	[more]
O64425	9.7e-40	43.97	E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV...	[more]
P93030	9.4e-27	34.04	E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV...	[more]
Q09463	1.2e-18	42.59	E3 ubiquitin ligase rnf-5 OS=Caenorhabditis elegans OX=6239 GN=rnf-5 PE=1 SV=1	[more]

BLAST of MC11g0883 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139659.1	1.28e-193	100.00	E3 ubiquitin-protein ligase RMA3-like [Momordica charantia]	[more]
XP_038899693.1	1.18e-167	87.55	E3 ubiquitin-protein ligase RMA3 [Benincasa hispida]	[more]
XP_008452467.1	4.64e-164	86.21	PREDICTED: E3 ubiquitin-protein ligase RMA3 [Cucumis melo] >KAA0064336.1 E3 ubiq...	[more]
XP_004141226.1	1.61e-162	85.88	E3 ubiquitin-protein ligase RMA3 [Cucumis sativus] >KGN55135.1 hypothetical prot...	[more]
XP_023521850.1	1.36e-156	81.61	E3 ubiquitin-protein ligase RMA3-like [Cucurbita pepo subsp. pepo] >XP_023521858...	[more]

BLAST of MC11g0883 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CDN1	6.22e-194	100.00	E3 ubiquitin-protein ligase RMA3-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A5A7VD79	2.25e-164	86.21	E3 ubiquitin-protein ligase RMA3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3BTX0	2.25e-164	86.21	E3 ubiquitin-protein ligase RMA3 OS=Cucumis melo OX=3656 GN=LOC103493490 PE=4 SV...	[more]
A0A0A0KZN0	7.79e-163	85.88	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G637750 P...	[more]
A0A6J1FI46	7.33e-154	80.46	E3 ubiquitin-protein ligase RMA3-like OS=Cucurbita moschata OX=3662 GN=LOC111445...	[more]

BLAST of MC11g0883 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27470.1	1.4e-49	48.55	RING membrane-anchor 3	[more]
AT4G03510.1	6.9e-41	43.97	RING membrane-anchor 1	[more]
AT4G03510.2	6.9e-41	43.97	RING membrane-anchor 1	[more]
AT4G28270.1	6.7e-28	34.04	RING membrane-anchor 2	[more]
AT1G74990.1	1.4e-25	50.93	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 43..89 e-value: 4.0E-10 score: 49.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 43..90 score: 12.666314
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 6..109 e-value: 2.5E-17 score: 64.4
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 43..89 e-value: 6.5E-9 score: 35.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..155
None	No IPR available	PANTHER	PTHR12313:SF69	E3 UBIQUITIN-PROTEIN LIGASE RMA3-LIKE	coord: 2..261
None	No IPR available	CDD	cd16745	RING-HC_AtRMA_like	coord: 41..91 e-value: 1.20116E-24 score: 90.8263
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 25..96
IPR045103	E3 ubiquitin-protein ligase RNF5/RNF185-like	PANTHER	PTHR12313	E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED	coord: 2..261
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 58..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g0883.1	MC11g0883.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071712	ER-associated misfolded protein catabolic process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0044390	ubiquitin-like protein conjugating enzyme binding
molecular_function	GO:0061630	ubiquitin protein ligase activity