MC11g0880 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC11g0880
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC11: 7482224 .. 7482640 (+)
RNA-Seq ExpressionMC11g0880
SyntenyMC11g0880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCAGGTTGATTCTCAAAGACATCAAAGCCCCGATCCATTTCCTTCTTCGCAACCCTGCTTCATCCGCTCCTTCCAGAGCTACTGCTCCTTTAGCTTACACAATACAAAATCAACTGCCTCCAAAGCAGAACACGCAATCCACTGCGGAATTTGCGAAATCCGGCGGATACCGGTTTGGCGTCGGTGAGCTTGAGCTCGCTGTAAATGACCGGCCGTCGGTGTCGATGGATTTGAAGTCTACTTTTAATGGCGGATTTAGGATCGAGGTTAGAGGCGGCAAGCGGCCGTCTCTTAACGACGACGATGATTTCCTGAGCGATGGCGACTTGGATAAGTTCGGCGACTGCAGCGATGTTGATGGCGGCGGAGATGATTACGATATGGACGATTTTGACGATCGGGATTCAGAG

mRNA sequence

ATGGCTTCCAGGTTGATTCTCAAAGACATCAAAGCCCCGATCCATTTCCTTCTTCGCAACCCTGCTTCATCCGCTCCTTCCAGAGCTACTGCTCCTTTAGCTTACACAATACAAAATCAACTGCCTCCAAAGCAGAACACGCAATCCACTGCGGAATTTGCGAAATCCGGCGGATACCGGTTTGGCGTCGGTGAGCTTGAGCTCGCTGTAAATGACCGGCCGTCGGTGTCGATGGATTTGAAGTCTACTTTTAATGGCGGATTTAGGATCGAGGTTAGAGGCGGCAAGCGGCCGTCTCTTAACGACGACGATGATTTCCTGAGCGATGGCGACTTGGATAAGTTCGGCGACTGCAGCGATGTTGATGGCGGCGGAGATGATTACGATATGGACGATTTTGACGATCGGGATTCAGAG

Coding sequence (CDS)

ATGGCTTCCAGGTTGATTCTCAAAGACATCAAAGCCCCGATCCATTTCCTTCTTCGCAACCCTGCTTCATCCGCTCCTTCCAGAGCTACTGCTCCTTTAGCTTACACAATACAAAATCAACTGCCTCCAAAGCAGAACACGCAATCCACTGCGGAATTTGCGAAATCCGGCGGATACCGGTTTGGCGTCGGTGAGCTTGAGCTCGCTGTAAATGACCGGCCGTCGGTGTCGATGGATTTGAAGTCTACTTTTAATGGCGGATTTAGGATCGAGGTTAGAGGCGGCAAGCGGCCGTCTCTTAACGACGACGATGATTTCCTGAGCGATGGCGACTTGGATAAGTTCGGCGACTGCAGCGATGTTGATGGCGGCGGAGATGATTACGATATGGACGATTTTGACGATCGGGATTCAGAG

Protein sequence

MASRLILKDIKAPIHFLLRNPASSAPSRATAPLAYTIQNQLPPKQNTQSTAEFAKSGGYRFGVGELELAVNDRPSVSMDLKSTFNGGFRIEVRGGKRPSLNDDDDFLSDGDLDKFGDCSDVDGGGDDYDMDDFDDRDSE
Homology
BLAST of MC11g0880 vs. NCBI nr
Match: XP_022936831.1 (uncharacterized protein LOC111443300 [Cucurbita moschata])

HSP 1 Score: 85.1 bits (209), Expect = 4.20e-18
Identity = 55/113 (48.67%), Postives = 69/113 (61.06%), Query Frame = 0

Query: 1   MASRLILKDIKAPIHFLLRNPASSAPSRATAPLAYTIQNQLPPKQNTQSTAEFAKSGGYR 60
           MASR ILKD+KAPI+FLLRNPASS P      LA +I N L P   TQS + F +     
Sbjct: 1   MASRSILKDVKAPIYFLLRNPASSVP------LAQSIHNHLLPFP-TQSASGFLR----- 60

Query: 61  FGVGELELAVNDRPSVSMDLKSTFNGGFRIEVRGGKRPSLNDDDDFLSDGDLD 113
                 EL ++DRP +     S+F+GGFRIEVRG ++P + D D+  SD D D
Sbjct: 61  ------ELGLSDRPLLPRHFNSSFDGGFRIEVRGKQQPVIEDIDE-QSDSDSD 94

BLAST of MC11g0880 vs. NCBI nr
Match: KAG6591964.1 (hypothetical protein SDJN03_14310, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 84.7 bits (208), Expect = 5.79e-18
Identity = 51/105 (48.57%), Postives = 65/105 (61.90%), Query Frame = 0

Query: 1   MASRLILKDIKAPIHFLLRNPASSAPSRATAPLAYTIQNQLPPKQNTQSTAEFAKSGGYR 60
           MASR ILKD+KAPI+FLLRNPASS P      LA +I N L P   TQS + F +     
Sbjct: 1   MASRSILKDVKAPIYFLLRNPASSVP------LAQSIHNHLLPFP-TQSASGFLR----- 60

Query: 61  FGVGELELAVNDRPSVSMDLKSTFNGGFRIEVRGGKRPSLNDDDD 105
                 EL ++DRP +     S+F+GGFRIEVRG ++P + D D+
Sbjct: 61  ------ELGLSDRPLLPRHFNSSFDGGFRIEVRGKQQPVIEDIDE 87

BLAST of MC11g0880 vs. NCBI nr
Match: XP_022976605.1 (uncharacterized protein LOC111476951 [Cucurbita maxima])

HSP 1 Score: 82.4 bits (202), Expect = 4.62e-17
Identity = 50/105 (47.62%), Postives = 64/105 (60.95%), Query Frame = 0

Query: 1   MASRLILKDIKAPIHFLLRNPASSAPSRATAPLAYTIQNQLPPKQNTQSTAEFAKSGGYR 60
           MASR ILKD+KAPI+ LLRNPASS P      LA +IQN L P    QS + F +     
Sbjct: 1   MASRSILKDVKAPIYLLLRNPASSVP------LAQSIQNHLLPFPR-QSASGFLR----- 60

Query: 61  FGVGELELAVNDRPSVSMDLKSTFNGGFRIEVRGGKRPSLNDDDD 105
                 EL ++DRP +     S+F+GGFRIEVRG ++P + D D+
Sbjct: 61  ------ELGLSDRPLLPRHFNSSFDGGFRIEVRGKQQPVIEDIDE 87

BLAST of MC11g0880 vs. NCBI nr
Match: KAE8649846.1 (hypothetical protein Csa_012085 [Cucumis sativus])

HSP 1 Score: 78.6 bits (192), Expect = 1.32e-15
Identity = 52/112 (46.43%), Postives = 61/112 (54.46%), Query Frame = 0

Query: 1   MASRLILKDIKAPIHFLLRNPASSAPS-RATAPLAYTIQNQLPPKQNTQSTAEFAKSGGY 60
           MASRLILKDIKAP+ FLLRNPASSAPS +A   L   I  Q PP    Q           
Sbjct: 1   MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPPVVLPQ----------- 60

Query: 61  RFGVGELELAVNDRPSVSMDLKSTFNGGFRIEVRGGKRPSLNDDDDFLSDGD 111
                   +   DRP +S  L S  +GGFRIEVRG ++   +DDD+   D D
Sbjct: 61  --------VCTRDRPQLSGVLNSIVDGGFRIEVRGQQKLMHDDDDNMEVDSD 93

BLAST of MC11g0880 vs. NCBI nr
Match: KAA0064333.1 (hypothetical protein E6C27_scaffold255G00320 [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 1.30e-13
Identity = 49/114 (42.98%), Postives = 60/114 (52.63%), Query Frame = 0

Query: 1   MASRLILKDIKAPIHFLLRNPASSAPSRATAPLAYTIQNQLPPKQNTQSTAEFAKSGGYR 60
           MASRLILKDIK P+ FLLRNPASSAPS      A  IQN L P      +          
Sbjct: 62  MASRLILKDIKTPLRFLLRNPASSAPS------AQAIQNLLLPIPRQYPSGFLG------ 121

Query: 61  FGVGELELAVNDRPSVSMDLKSTFNGGFRIEVRGGKRPSLNDDDDFLSDGDLDK 114
                 ++    RP +S    S+ +GGFRIEVRG +  +  DDD+   D D +K
Sbjct: 122 ------QVCTGGRPQLSGVFNSSVDGGFRIEVRGKQELANYDDDNMEIDSDFEK 157

BLAST of MC11g0880 vs. ExPASy TrEMBL
Match: A0A6J1F8K5 (uncharacterized protein LOC111443300 OS=Cucurbita moschata OX=3662 GN=LOC111443300 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 2.03e-18
Identity = 55/113 (48.67%), Postives = 69/113 (61.06%), Query Frame = 0

Query: 1   MASRLILKDIKAPIHFLLRNPASSAPSRATAPLAYTIQNQLPPKQNTQSTAEFAKSGGYR 60
           MASR ILKD+KAPI+FLLRNPASS P      LA +I N L P   TQS + F +     
Sbjct: 1   MASRSILKDVKAPIYFLLRNPASSVP------LAQSIHNHLLPFP-TQSASGFLR----- 60

Query: 61  FGVGELELAVNDRPSVSMDLKSTFNGGFRIEVRGGKRPSLNDDDDFLSDGDLD 113
                 EL ++DRP +     S+F+GGFRIEVRG ++P + D D+  SD D D
Sbjct: 61  ------ELGLSDRPLLPRHFNSSFDGGFRIEVRGKQQPVIEDIDE-QSDSDSD 94

BLAST of MC11g0880 vs. ExPASy TrEMBL
Match: A0A6J1IJY0 (uncharacterized protein LOC111476951 OS=Cucurbita maxima OX=3661 GN=LOC111476951 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.24e-17
Identity = 50/105 (47.62%), Postives = 64/105 (60.95%), Query Frame = 0

Query: 1   MASRLILKDIKAPIHFLLRNPASSAPSRATAPLAYTIQNQLPPKQNTQSTAEFAKSGGYR 60
           MASR ILKD+KAPI+ LLRNPASS P      LA +IQN L P    QS + F +     
Sbjct: 1   MASRSILKDVKAPIYLLLRNPASSVP------LAQSIQNHLLPFPR-QSASGFLR----- 60

Query: 61  FGVGELELAVNDRPSVSMDLKSTFNGGFRIEVRGGKRPSLNDDDD 105
                 EL ++DRP +     S+F+GGFRIEVRG ++P + D D+
Sbjct: 61  ------ELGLSDRPLLPRHFNSSFDGGFRIEVRGKQQPVIEDIDE 87

BLAST of MC11g0880 vs. ExPASy TrEMBL
Match: A0A5A7V875 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G00320 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 6.28e-14
Identity = 49/114 (42.98%), Postives = 60/114 (52.63%), Query Frame = 0

Query: 1   MASRLILKDIKAPIHFLLRNPASSAPSRATAPLAYTIQNQLPPKQNTQSTAEFAKSGGYR 60
           MASRLILKDIK P+ FLLRNPASSAPS      A  IQN L P      +          
Sbjct: 62  MASRLILKDIKTPLRFLLRNPASSAPS------AQAIQNLLLPIPRQYPSGFLG------ 121

Query: 61  FGVGELELAVNDRPSVSMDLKSTFNGGFRIEVRGGKRPSLNDDDDFLSDGDLDK 114
                 ++    RP +S    S+ +GGFRIEVRG +  +  DDD+   D D +K
Sbjct: 122 ------QVCTGGRPQLSGVFNSSVDGGFRIEVRGKQELANYDDDNMEIDSDFEK 157

BLAST of MC11g0880 vs. ExPASy TrEMBL
Match: A0A0A0L3F1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G637720 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 9.12e-08
Identity = 31/44 (70.45%), Postives = 33/44 (75.00%), Query Frame = 0

Query: 1  MASRLILKDIKAPIHFLLRNPASSAPS-RATAPLAYTIQNQLPP 43
          MASRLILKDIKAP+ FLLRNPASSAPS +A   L   I  Q PP
Sbjct: 1  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQNLLLPIPRQSPP 44

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022936831.14.20e-1848.67uncharacterized protein LOC111443300 [Cucurbita moschata][more]
KAG6591964.15.79e-1848.57hypothetical protein SDJN03_14310, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022976605.14.62e-1747.62uncharacterized protein LOC111476951 [Cucurbita maxima][more]
KAE8649846.11.32e-1546.43hypothetical protein Csa_012085 [Cucumis sativus][more]
KAA0064333.11.30e-1342.98hypothetical protein E6C27_scaffold255G00320 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A6J1F8K52.03e-1848.67uncharacterized protein LOC111443300 OS=Cucurbita moschata OX=3662 GN=LOC1114433... [more]
A0A6J1IJY02.24e-1747.62uncharacterized protein LOC111476951 OS=Cucurbita maxima OX=3661 GN=LOC111476951... [more]
A0A5A7V8756.28e-1442.98Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0L3F19.12e-0870.45Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G637720 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..139

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC11g0880.1MC11g0880.1mRNA