MC11g0807 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0807
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	50S ribosomal protein L13
Location	MC11: 6754669 .. 6757433 (+)
RNA-Seq Expression	MC11g0807
Synteny	MC11g0807

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATGCTCTGTGCTTCCTCCTCTACAGCCACCTTCTATTTACATTCCACTATCAACAATGGAGCCACGAGTAACAGAGGCATTCCCAGAAAGTCACTTGTTGCTGGTTTCCCACTCCCATTTTCGAAATCTTCTTTTCTTCAAACCCAGACCGCGATTACTCTGAACTCCAAGCCGGAGAGTTCGGTCCTTCAACTGCGGGCTCAGGAGCTCGATCGCGTCCCTTTAGAGCAGCGGTGGATGTTCGAAGGCGACGAACTCGACGGCCCTGTACGTCTGTAAATCTTTCAAAATGTTTGTACCTTTGGGATTATCTGGTAAAGGAAATGTCTTAAATCGCGTTCTTGCATAAGGCGCTAATGGGTTCCAAGCAAACCCACAAATCCTATCGAATTTTGTTATTCTGGAACTTCTCTGTGCCCTCAATCAATCTTGTTCTTTTGGGAGGGGGAGTTGAGATTTTGTTTTTAGCATCTCCACATTGCAATGTCCCCTTCCATTAATATTCTGGAGTCGTTTTGTAGAAAATATCAACAAATGGTTGAACATACAAACTTATTTTTGCTCGTCAGACCAATTTGATGCCCATTATCTGAATTTTGAATCCTTTTCCTGCCTTTCGGGTTTGTTTCTTTGTAACAAGCCTAGGTTTAAAGTATAGAGTTGCAAAATTGAGTTTGTGTAATATGTGTTTGGATTGCATTAAAGAAAGAATAGGTTATAGAAACTTAAGAAACTTAAGTTTGAGCTTATAAGACGTGGGTTTATGTAGCCGGTTGGACTAAAAAATCTATAGCTTCAAATAAATGAACTCACATATTAAACATAAACTCGACATTTTAATACCAAGTTACATAAGCCTACTCACGAGCCAAGTACCCCTTTCAATTTGGATATTTAGCAACCTTGATTCTTTTCCGTGCAGGACATATGGAATACAACATGGTACCCGAAGGCTGCTGATCATGTTAACACAGAAAAAACCTGGTATGTGGTTGATGCCACTGATAAGATTTTGGGAAGGCTAGCTTCAACTATTGCCATTCATATCCGAGGGAAGAATCTACCGACCTACACTCCTAGTGTGGATATGGGGGCTTTTGTGATTGTGGTATGTGGTTGCACTTATACATAATGTTCATTATGGGCAATGCATATGCTTTTGTACACTAACAAATTTCATGATATTTGTTTTCAATATAGTTACTTATTCACTGTTTCCCACAAATCAATACTTATTCTCTTGATCCTATCTAGGTAAATGCAGAAAAAGTCGCTGTGTCTGGTAGAAAGAGGACGGAAAAGCTGTACAGGAGGCATTCGGGGCGACCAGGTGGTATGAAAGTAGAAACTTTTGAGCAGCTACAGCAGAGAATTCCTGAAAGAATTATTGAGCATGCCGTTCGTGGTATGCTTCCTAAAGGGAGGGTAAGTAATTCCTACTACTTAAGTGCCATATGCATGAAAACTGAATTTTTGTGGGTGTAGAGCGATTGCTAAAGTCTTGATCACCCCTCTGTGTAGGAAAATGATGTCGAGAGATTATGCGGATAGTATATTTTCTGCTTTAGTTTGTTGACAAGTCTTTTTAGAAGTTTTAGTTGGTTAACTGAGATAGCTTTTACTGTTCCAAGGGCCTCACATCCTATAAACAATGGATTTTAGCGGATACTGTCCTATAAGAAAACCAAGATAGCTCTGTTCTGGTTGCTGTAGACTGTCAGTAATTATGTTCCATCTATCAGAAGTGTTCTTCTCACTTGTTATCTGTGAAGTTTATGGCTTCTGGTTTCGATATAAGTAGTTAGTTCCAAGGGCCCTTAAATCCTACAAACATTAGATTTTAGAAGCAACAGTTTATGAAAAGAATCTCCAATGATAAAAAAAATACGATTTCTAGTGGCCTTTCAAAATAAGTTGATGTCTACAAGAGGATATCAAAACGTGCGTTGTAGGTAATGGTGTGTAGAATGTGATGAGACCGAGTTACTTGTGGAAAGTTCGGATTGTTTGGGAAACTAACATATGGTCTTTTGCTTACTCCGTGGCTTCTAGCATTCTTTTGCTTACATTTAATAGGCAAAATCTTGGATCCTCTACGGTCATACTGTCACTACCAGAATCCAAGACCTGTACTGTTGATGGAGCCTGGCAACTGCATGTAGGGTGATTTTCTTGGCAGTATCCAGGACCAGGAAAACTAATTATTTTGCTTTAGCTATGTTTTGAAATATTTTGGTTGTCTTTTGAATACTACCATTGATTTGAAAATTGAATCAGACTTTTCATCTGGGTGGCATTTGCACTTGCCGTTTATGATTTTTTTTTTTCACTGGGGGAAGTATAAACACTTCTGCGTCATCCTTTGAAGAATATGTTCGCGATGAACTGGCAGTTGTTTATGTGGTATATTCCGATGTCGATGCTTTGACACGACATGGATGAGATTTTACTTTAGACATCTATTGGGTTGATATGAGGTCTATGTCTTACTAGGACACCTTGCTTGAAATAGTGTAAACTGTCTCCTCACTTCTTATTTACTGTAAACTGTATCATATTGTGGTGTTTAGGAATTTCCCTGTTTCCTGCTTGCATTTATGTTCCTGAAATTTTCTTAGTTGTTAACCATGGCGGTTTATGTGCAGCTTGGAAGAGCACTTTTTAACCACTTGAAGGTTTACAAAGGACCAGACCATCCACATGAGGCACAAAAGCCAGTTGAGCTGCCAATAAGGGACAAAAGGATAAACAAGGAAAGA

mRNA sequence

ATGGCGATGCTCTGTGCTTCCTCCTCTACAGCCACCTTCTATTTACATTCCACTATCAACAATGGAGCCACGAGTAACAGAGGCATTCCCAGAAAGTCACTTGTTGCTGGTTTCCCACTCCCATTTTCGAAATCTTCTTTTCTTCAAACCCAGACCGCGATTACTCTGAACTCCAAGCCGGAGAGTTCGGTCCTTCAACTGCGGGCTCAGGAGCTCGATCGCGTCCCTTTAGAGCAGCGGTGGATGTTCGAAGGCGACGAACTCGACGGCCCTGACATATGGAATACAACATGGTACCCGAAGGCTGCTGATCATGTTAACACAGAAAAAACCTGGTATGTGGTTGATGCCACTGATAAGATTTTGGGAAGGCTAGCTTCAACTATTGCCATTCATATCCGAGGGAAGAATCTACCGACCTACACTCCTAGTGTGGATATGGGGGCTTTTGTGATTGTGGTAAATGCAGAAAAAGTCGCTGTGTCTGGTAGAAAGAGGACGGAAAAGCTGTACAGGAGGCATTCGGGGCGACCAGGTGGTATGAAAGTAGAAACTTTTGAGCAGCTACAGCAGAGAATTCCTGAAAGAATTATTGAGCATGCCGTTCGTGGTATGCTTCCTAAAGGGAGGCTTGGAAGAGCACTTTTTAACCACTTGAAGGTTTACAAAGGACCAGACCATCCACATGAGGCACAAAAGCCAGTTGAGCTGCCAATAAGGGACAAAAGGATAAACAAGGAAAGA

Coding sequence (CDS)

ATGGCGATGCTCTGTGCTTCCTCCTCTACAGCCACCTTCTATTTACATTCCACTATCAACAATGGAGCCACGAGTAACAGAGGCATTCCCAGAAAGTCACTTGTTGCTGGTTTCCCACTCCCATTTTCGAAATCTTCTTTTCTTCAAACCCAGACCGCGATTACTCTGAACTCCAAGCCGGAGAGTTCGGTCCTTCAACTGCGGGCTCAGGAGCTCGATCGCGTCCCTTTAGAGCAGCGGTGGATGTTCGAAGGCGACGAACTCGACGGCCCTGACATATGGAATACAACATGGTACCCGAAGGCTGCTGATCATGTTAACACAGAAAAAACCTGGTATGTGGTTGATGCCACTGATAAGATTTTGGGAAGGCTAGCTTCAACTATTGCCATTCATATCCGAGGGAAGAATCTACCGACCTACACTCCTAGTGTGGATATGGGGGCTTTTGTGATTGTGGTAAATGCAGAAAAAGTCGCTGTGTCTGGTAGAAAGAGGACGGAAAAGCTGTACAGGAGGCATTCGGGGCGACCAGGTGGTATGAAAGTAGAAACTTTTGAGCAGCTACAGCAGAGAATTCCTGAAAGAATTATTGAGCATGCCGTTCGTGGTATGCTTCCTAAAGGGAGGCTTGGAAGAGCACTTTTTAACCACTTGAAGGTTTACAAAGGACCAGACCATCCACATGAGGCACAAAAGCCAGTTGAGCTGCCAATAAGGGACAAAAGGATAAACAAGGAAAGA

Protein sequence

MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYPKAADHVNTEKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIRDKRINKER

Homology

[Close]

BLAST of MC11g0807 vs. ExPASy Swiss-Prot
Match: Q9SYL9 (50S ribosomal protein L13, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL13 PE=2 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 2.6e-87
Identity = 170/254 (66.93%), Postives = 197/254 (77.56%), Query Frame = 0


Query: 1   MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPL-PFSKSSFLQTQTAITLNSK 60
           MA+LC+SS+         +++ +  + G  RKS   GF L   SK S    +  I  NSK
Sbjct: 1   MAVLCSSSTV-------ILSSSSVKSSGSERKSPFLGFSLTAISKPS---VRVGIYANSK 60

Query: 61  PESSVLQLRAQ-----ELDRVPLEQRWMFEGDELDGPDIWNTTWYPKAADHVNTEKTWYV 120
                LQ++ +         VP  QRWMF+ +E +GPDIWNTTWYPKA+DHVNT+K W+V
Sbjct: 61  ---RGLQVKCEAEPTTTTSLVPANQRWMFDEEEANGPDIWNTTWYPKASDHVNTDKPWFV 120

Query: 121 VDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRH 180
           VDATDKILGRLASTIA HIRGKNL +YTPSVDMGAFVIVVNAEKVAVSG+KR +KLYRRH
Sbjct: 121 VDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRH 180

Query: 181 SGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKP 240
           SGRPGGM VETF+QLQQRIPERI+EHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKP
Sbjct: 181 SGRPGGMTVETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKP 240

Query: 241 VELPIRDKRINKER 249
           ++LPIRDKRI  ++
Sbjct: 241 LDLPIRDKRIQLQK 241

[Close]

BLAST of MC11g0807 vs. ExPASy Swiss-Prot
Match: P12629 (50S ribosomal protein L13, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL13 PE=1 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 1.3e-81
Identity = 158/250 (63.20%), Postives = 185/250 (74.00%), Query Frame = 0


Query: 3   MLCASS----STATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNS 62
           M CASS    S  T       N   T     PR ++ A   +   KS+   T+       
Sbjct: 4   MACASSLTFPSAQTQKSFFGTNVKQTPVLSFPRPTVAAAVAVSARKSTSASTKCTEEWRQ 63

Query: 63  KPESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYPKAADHVNTEKTWYVVDAT 122
             E+   +     +  VPL+QRWMF  +E  GPDIWNTTWYPK+ADHV T+K WYVVDAT
Sbjct: 64  LKEAVKKEF---AIPHVPLDQRWMFTLEEATGPDIWNTTWYPKSADHVPTDKKWYVVDAT 123

Query: 123 DKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRP 182
           D ILGR+ASTIAIHIRGKNL +YTPSVDMGAFVIVVNA+KVAVSG+KRT+KLYRRHSGRP
Sbjct: 124 DLILGRMASTIAIHIRGKNLASYTPSVDMGAFVIVVNADKVAVSGKKRTQKLYRRHSGRP 183

Query: 183 GGMKVETFEQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELP 242
           GG+K ETF+QLQ+RIPERIIEHAVRGMLPKGRLGR LFNHLKVYKG +HPH+AQ+P++LP
Sbjct: 184 GGLKEETFDQLQKRIPERIIEHAVRGMLPKGRLGRYLFNHLKVYKGAEHPHQAQQPIDLP 243

Query: 243 IRDKRINKER 249
           +RDKRI  E+
Sbjct: 244 LRDKRIRVEK 250

[Close]

BLAST of MC11g0807 vs. ExPASy Swiss-Prot
Match: Q3MF94 (50S ribosomal protein L13 OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=rplM PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.6e-50
Identity = 97/131 (74.05%), Postives = 110/131 (83.97%), Query Frame = 0


Query: 109 EKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTE 168
           E+ WYVVDATDK LGRLAS IA+ +RGKN   YTP +D G FVIVVNAEKVAV+G+KRT+
Sbjct: 13  ERDWYVVDATDKRLGRLASEIAMILRGKNKAHYTPHLDTGDFVIVVNAEKVAVTGKKRTQ 72

Query: 169 KLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHP 228
           KLYRRHSGRPGGMK ETF +LQQR+PERI+EHAV+GMLPK  LG+ LF  LKVY GP HP
Sbjct: 73  KLYRRHSGRPGGMKTETFAKLQQRLPERIVEHAVKGMLPKNSLGKQLFTKLKVYAGPTHP 132

Query: 229 HEAQKPVELPI 240
           H+AQKP EL I
Sbjct: 133 HDAQKPKELNI 143

[Close]

BLAST of MC11g0807 vs. ExPASy Swiss-Prot
Match: Q8YPK6 (50S ribosomal protein L13 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rplM PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 7.5e-50
Identity = 96/131 (73.28%), Postives = 110/131 (83.97%), Query Frame = 0


Query: 109 EKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTE 168
           E+ WYVVDATDK LGRLAS IA+ +RGKN   YTP +D G FVIVVNA+KVAV+G+KRT+
Sbjct: 13  ERDWYVVDATDKRLGRLASEIAMILRGKNKAHYTPHLDTGDFVIVVNAKKVAVTGKKRTQ 72

Query: 169 KLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHP 228
           KLYRRHSGRPGGMK ETF +LQQR+PERI+EHAV+GMLPK  LG+ LF  LKVY GP HP
Sbjct: 73  KLYRRHSGRPGGMKTETFAKLQQRLPERIVEHAVKGMLPKNSLGKQLFTKLKVYAGPTHP 132

Query: 229 HEAQKPVELPI 240
           H+AQKP EL I
Sbjct: 133 HDAQKPKELNI 143

[Close]

BLAST of MC11g0807 vs. ExPASy Swiss-Prot
Match: B1WQT8 (50S ribosomal protein L13 OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=rplM PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 9.8e-50
Identity = 93/131 (70.99%), Postives = 111/131 (84.73%), Query Frame = 0


Query: 109 EKTWYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTE 168
           ++ WYV+DATD+ LGRLA  +A  +RGKN PTYTP +D G FVI++NA+KVAV+GRK T+
Sbjct: 13  DQKWYVIDATDQRLGRLACEVAKILRGKNKPTYTPHMDTGDFVIIINADKVAVTGRKSTQ 72

Query: 169 KLYRRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHP 228
           KLYRRHSGRPGGMK+ETFE+LQQRIPERIIE AV+GMLPK  LGR LF  LKVY GP+HP
Sbjct: 73  KLYRRHSGRPGGMKIETFEKLQQRIPERIIEKAVKGMLPKNALGRQLFTKLKVYPGPNHP 132

Query: 229 HEAQKPVELPI 240
           H+AQKP EL +
Sbjct: 133 HQAQKPEELTL 143

[Close]

BLAST of MC11g0807 vs. NCBI nr
Match: XP_022134203.1 (50S ribosomal protein L13, chloroplastic [Momordica charantia])

HSP 1 Score: 498 bits (1283), Expect = 6.82e-178
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKP 60
           MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKP
Sbjct: 1   MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKP 60

Query: 61  ESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYPKAADHVNTEKTWYVVDATDK 120
           ESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYPKAADHVNTEKTWYVVDATDK
Sbjct: 61  ESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYPKAADHVNTEKTWYVVDATDK 120

Query: 121 ILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGG 180
           ILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGG
Sbjct: 121 ILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGG 180

Query: 181 MKVETFEQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIR 240
           MKVETFEQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIR
Sbjct: 181 MKVETFEQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIR 240

Query: 241 DKRINKER 248
           DKRINKER
Sbjct: 241 DKRINKER 248

[Close]

BLAST of MC11g0807 vs. NCBI nr
Match: XP_022941245.1 (50S ribosomal protein L13, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 456 bits (1172), Expect = 5.70e-161
Identity = 226/248 (91.13%), Postives = 234/248 (94.35%), Query Frame = 0


Query: 1   MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKP 60
           MAMLCASSSTATF LHST+NN   SNR IPR SLVAGFPLP SKSSFLQTQT ITL SKP
Sbjct: 1   MAMLCASSSTATFSLHSTLNNANASNRAIPRMSLVAGFPLPQSKSSFLQTQTTITLTSKP 60

Query: 61  ESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYPKAADHVNTEKTWYVVDATDK 120
           +SSV Q+RAQELDRVPLEQRWMFEGDE+DGPDIWN TWYPKAADHVNTEK WYVVDATDK
Sbjct: 61  KSSVFQVRAQELDRVPLEQRWMFEGDEIDGPDIWNKTWYPKAADHVNTEKPWYVVDATDK 120

Query: 121 ILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGG 180
           ILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGG
Sbjct: 121 ILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGG 180

Query: 181 MKVETFEQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIR 240
           M VETF+QLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIR
Sbjct: 181 MTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIR 240

Query: 241 DKRINKER 248
           DKRINKER
Sbjct: 241 DKRINKER 248

[Close]

BLAST of MC11g0807 vs. NCBI nr
Match: XP_023524699.1 (50S ribosomal protein L13, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 455 bits (1171), Expect = 8.09e-161
Identity = 226/248 (91.13%), Postives = 235/248 (94.76%), Query Frame = 0


Query: 1   MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKP 60
           MAMLCASSSTATF LHST+NNG  SNR +PR SLVAGFPL  SKSSFLQTQT ITL SKP
Sbjct: 1   MAMLCASSSTATFSLHSTLNNGNASNRALPRMSLVAGFPLVQSKSSFLQTQTTITLTSKP 60

Query: 61  ESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYPKAADHVNTEKTWYVVDATDK 120
           +SSVLQ+RAQELDRVPLEQRWMFEGDE+DGPDIWN TWYPKAADHVNTEK WYVVDATDK
Sbjct: 61  KSSVLQVRAQELDRVPLEQRWMFEGDEIDGPDIWNKTWYPKAADHVNTEKPWYVVDATDK 120

Query: 121 ILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGG 180
           ILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGG
Sbjct: 121 ILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGG 180

Query: 181 MKVETFEQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIR 240
           M VETF+QLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIR
Sbjct: 181 MTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIR 240

Query: 241 DKRINKER 248
           DKRINKER
Sbjct: 241 DKRINKER 248

[Close]

BLAST of MC11g0807 vs. NCBI nr
Match: XP_022981281.1 (50S ribosomal protein L13, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 455 bits (1170), Expect = 1.15e-160
Identity = 226/248 (91.13%), Postives = 233/248 (93.95%), Query Frame = 0


Query: 1   MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKP 60
           MAMLCASSSTATF LHST NN   SNR IPRKSLVAGFPLP SKSSFLQTQT ITL SKP
Sbjct: 1   MAMLCASSSTATFSLHSTPNNANASNRAIPRKSLVAGFPLPQSKSSFLQTQTTITLTSKP 60

Query: 61  ESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYPKAADHVNTEKTWYVVDATDK 120
           +SSV Q+RAQELDRVPLEQRWMFEGDE+DGPDIWN TWYPKA DHVNTEK WYVVDATDK
Sbjct: 61  KSSVFQVRAQELDRVPLEQRWMFEGDEIDGPDIWNNTWYPKAVDHVNTEKPWYVVDATDK 120

Query: 121 ILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGG 180
           ILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGG
Sbjct: 121 ILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGG 180

Query: 181 MKVETFEQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIR 240
           M VETF+QLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIR
Sbjct: 181 MTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIR 240

Query: 241 DKRINKER 248
           DKRINKER
Sbjct: 241 DKRINKER 248

[Close]

BLAST of MC11g0807 vs. NCBI nr
Match: KAG6607943.1 (50S ribosomal protein L13, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 454 bits (1168), Expect = 2.32e-160
Identity = 225/248 (90.73%), Postives = 234/248 (94.35%), Query Frame = 0


Query: 1   MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKP 60
           MAMLCASSSTATF LHST+NN   SNR IPR SLVAGFPLP SKSSFLQTQT ITL SKP
Sbjct: 1   MAMLCASSSTATFSLHSTLNNANASNRAIPRMSLVAGFPLPQSKSSFLQTQTTITLTSKP 60

Query: 61  ESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYPKAADHVNTEKTWYVVDATDK 120
           +SSV Q+RAQELDRVPLEQRWMF+GDE+DGPDIWN TWYPKAADHVNTEK WYVVDATDK
Sbjct: 61  KSSVFQVRAQELDRVPLEQRWMFKGDEIDGPDIWNKTWYPKAADHVNTEKPWYVVDATDK 120

Query: 121 ILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGG 180
           ILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGG
Sbjct: 121 ILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGG 180

Query: 181 MKVETFEQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIR 240
           M VETF+QLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIR
Sbjct: 181 MTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIR 240

Query: 241 DKRINKER 248
           DKRINKER
Sbjct: 241 DKRINKER 248

[Close]

BLAST of MC11g0807 vs. ExPASy TrEMBL
Match: A0A6J1C1B3 (50S ribosomal protein L13, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006518 PE=3 SV=1)

HSP 1 Score: 498 bits (1283), Expect = 3.30e-178
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0


Query: 1   MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKP 60
           MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKP
Sbjct: 1   MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKP 60

Query: 61  ESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYPKAADHVNTEKTWYVVDATDK 120
           ESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYPKAADHVNTEKTWYVVDATDK
Sbjct: 61  ESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYPKAADHVNTEKTWYVVDATDK 120

Query: 121 ILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGG 180
           ILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGG
Sbjct: 121 ILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGG 180

Query: 181 MKVETFEQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIR 240
           MKVETFEQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIR
Sbjct: 181 MKVETFEQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIR 240

Query: 241 DKRINKER 248
           DKRINKER
Sbjct: 241 DKRINKER 248

[Close]

BLAST of MC11g0807 vs. ExPASy TrEMBL
Match: A0A6J1FT16 (50S ribosomal protein L13, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111446606 PE=3 SV=1)

HSP 1 Score: 456 bits (1172), Expect = 2.76e-161
Identity = 226/248 (91.13%), Postives = 234/248 (94.35%), Query Frame = 0


Query: 1   MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKP 60
           MAMLCASSSTATF LHST+NN   SNR IPR SLVAGFPLP SKSSFLQTQT ITL SKP
Sbjct: 1   MAMLCASSSTATFSLHSTLNNANASNRAIPRMSLVAGFPLPQSKSSFLQTQTTITLTSKP 60

Query: 61  ESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYPKAADHVNTEKTWYVVDATDK 120
           +SSV Q+RAQELDRVPLEQRWMFEGDE+DGPDIWN TWYPKAADHVNTEK WYVVDATDK
Sbjct: 61  KSSVFQVRAQELDRVPLEQRWMFEGDEIDGPDIWNKTWYPKAADHVNTEKPWYVVDATDK 120

Query: 121 ILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGG 180
           ILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGG
Sbjct: 121 ILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGG 180

Query: 181 MKVETFEQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIR 240
           M VETF+QLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIR
Sbjct: 181 MTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIR 240

Query: 241 DKRINKER 248
           DKRINKER
Sbjct: 241 DKRINKER 248

[Close]

BLAST of MC11g0807 vs. ExPASy TrEMBL
Match: A0A6J1IW42 (50S ribosomal protein L13, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111480461 PE=3 SV=1)

HSP 1 Score: 455 bits (1170), Expect = 5.57e-161
Identity = 226/248 (91.13%), Postives = 233/248 (93.95%), Query Frame = 0


Query: 1   MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKP 60
           MAMLCASSSTATF LHST NN   SNR IPRKSLVAGFPLP SKSSFLQTQT ITL SKP
Sbjct: 1   MAMLCASSSTATFSLHSTPNNANASNRAIPRKSLVAGFPLPQSKSSFLQTQTTITLTSKP 60

Query: 61  ESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYPKAADHVNTEKTWYVVDATDK 120
           +SSV Q+RAQELDRVPLEQRWMFEGDE+DGPDIWN TWYPKA DHVNTEK WYVVDATDK
Sbjct: 61  KSSVFQVRAQELDRVPLEQRWMFEGDEIDGPDIWNNTWYPKAVDHVNTEKPWYVVDATDK 120

Query: 121 ILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGG 180
           ILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGG
Sbjct: 121 ILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGG 180

Query: 181 MKVETFEQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIR 240
           M VETF+QLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPV+LPIR
Sbjct: 181 MTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVDLPIR 240

Query: 241 DKRINKER 248
           DKRINKER
Sbjct: 241 DKRINKER 248

[Close]

BLAST of MC11g0807 vs. ExPASy TrEMBL
Match: A0A6J1F6Z3 (50S ribosomal protein L13, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111442721 PE=3 SV=1)

HSP 1 Score: 447 bits (1150), Expect = 6.22e-158
Identity = 221/248 (89.11%), Postives = 232/248 (93.55%), Query Frame = 0


Query: 1   MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKP 60
           MAMLCASSST TF++HST+NNG+ SNRGIPRKS V GFPLP SKS  L TQT ITLNS+ 
Sbjct: 1   MAMLCASSSTPTFFVHSTLNNGSKSNRGIPRKSFVDGFPLPQSKSYLLPTQTTITLNSQS 60

Query: 61  ESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYPKAADHVNTEKTWYVVDATDK 120
           +SS +Q+RAQELDRVPLEQRWMFEGDELDGPDIWN TWYPKA DHVNTEK WYVVDATDK
Sbjct: 61  KSSGVQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYPKAVDHVNTEKPWYVVDATDK 120

Query: 121 ILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGG 180
           ILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGG
Sbjct: 121 ILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGG 180

Query: 181 MKVETFEQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIR 240
           M VETF+QLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIR
Sbjct: 181 MTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIR 240

Query: 241 DKRINKER 248
           DKRINKER
Sbjct: 241 DKRINKER 248

[Close]

BLAST of MC11g0807 vs. ExPASy TrEMBL
Match: A0A6J1IPT4 (50S ribosomal protein L13, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111477096 PE=3 SV=1)

HSP 1 Score: 442 bits (1137), Expect = 5.96e-156
Identity = 219/248 (88.31%), Postives = 230/248 (92.74%), Query Frame = 0


Query: 1   MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPLPFSKSSFLQTQTAITLNSKP 60
           MAMLCASSST TF++HST+NNG+ SNRGI RKS V GF LP SKS  L TQT ITLNS+ 
Sbjct: 1   MAMLCASSSTPTFFVHSTLNNGSKSNRGIARKSFVDGFSLPQSKSYLLPTQTTITLNSQS 60

Query: 61  ESSVLQLRAQELDRVPLEQRWMFEGDELDGPDIWNTTWYPKAADHVNTEKTWYVVDATDK 120
           +SS +Q+RAQELDRVPLEQRWMFEGDELDGPDIWN TWYPKA DHVNTEK WYVVDATDK
Sbjct: 61  KSSAVQVRAQELDRVPLEQRWMFEGDELDGPDIWNKTWYPKAVDHVNTEKPWYVVDATDK 120

Query: 121 ILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRHSGRPGG 180
           ILGRLASTIA HIRGK+LPTYTPSVDMGAFVIVVNAEKVAVSGRKRT+KLYRRHSGRPGG
Sbjct: 121 ILGRLASTIANHIRGKDLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTQKLYRRHSGRPGG 180

Query: 181 MKVETFEQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIR 240
           M VETF+QLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIR
Sbjct: 181 MTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPVELPIR 240

Query: 241 DKRINKER 248
           DKRINKER
Sbjct: 241 DKRINKER 248

[Close]

BLAST of MC11g0807 vs. TAIR 10
Match: AT1G78630.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 323.2 bits (827), Expect = 1.9e-88
Identity = 170/254 (66.93%), Postives = 197/254 (77.56%), Query Frame = 0


Query: 1   MAMLCASSSTATFYLHSTINNGATSNRGIPRKSLVAGFPL-PFSKSSFLQTQTAITLNSK 60
           MA+LC+SS+         +++ +  + G  RKS   GF L   SK S    +  I  NSK
Sbjct: 1   MAVLCSSSTV-------ILSSSSVKSSGSERKSPFLGFSLTAISKPS---VRVGIYANSK 60

Query: 61  PESSVLQLRAQ-----ELDRVPLEQRWMFEGDELDGPDIWNTTWYPKAADHVNTEKTWYV 120
                LQ++ +         VP  QRWMF+ +E +GPDIWNTTWYPKA+DHVNT+K W+V
Sbjct: 61  ---RGLQVKCEAEPTTTTSLVPANQRWMFDEEEANGPDIWNTTWYPKASDHVNTDKPWFV 120

Query: 121 VDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLYRRH 180
           VDATDKILGRLASTIA HIRGKNL +YTPSVDMGAFVIVVNAEKVAVSG+KR +KLYRRH
Sbjct: 121 VDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRH 180

Query: 181 SGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKP 240
           SGRPGGM VETF+QLQQRIPERI+EHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKP
Sbjct: 181 SGRPGGMTVETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKP 240

Query: 241 VELPIRDKRINKER 249
           ++LPIRDKRI  ++
Sbjct: 241 LDLPIRDKRIQLQK 241

[Close]

BLAST of MC11g0807 vs. TAIR 10
Match: AT3G01790.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 91.3 bits (225), Expect = 1.2e-18
Identity = 48/125 (38.40%), Postives = 73/125 (58.40%), Query Frame = 0


Query: 112 WYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLY 171
           W V DA  ++LGRLAS I+  ++ K+ PTY P+ D G   IV+NA+++  +GRK T+K Y
Sbjct: 32  WRVFDARGQVLGRLASQISTVLQAKDKPTYCPNRDDGDICIVLNAKEIGFTGRKLTDKFY 91

Query: 172 RRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEA 231
           R H+G  G +K  + +    + P  +I  AV  MLP   L       L++++G +HP   
Sbjct: 92  RWHTGYIGHLKERSLKDQMAKDPTEVIRKAVWRMLPSNNLRDDRDRKLRIFEGGEHPF-G 151

Query: 232 QKPVE 237
            KP+E
Sbjct: 152 DKPLE 155

[Close]

BLAST of MC11g0807 vs. TAIR 10
Match: AT3G01790.2 (Ribosomal protein L13 family protein )

HSP 1 Score: 91.3 bits (225), Expect = 1.2e-18
Identity = 48/125 (38.40%), Postives = 73/125 (58.40%), Query Frame = 0


Query: 112 WYVVDATDKILGRLASTIAIHIRGKNLPTYTPSVDMGAFVIVVNAEKVAVSGRKRTEKLY 171
           W V DA  ++LGRLAS I+  ++ K+ PTY P+ D G   IV+NA+++  +GRK T+K Y
Sbjct: 32  WRVFDARGQVLGRLASQISTVLQAKDKPTYCPNRDDGDICIVLNAKEIGFTGRKLTDKFY 91

Query: 172 RRHSGRPGGMKVETFEQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEA 231
           R H+G  G +K  + +    + P  +I  AV  MLP   L       L++++G +HP   
Sbjct: 92  RWHTGYIGHLKERSLKDQMAKDPTEVIRKAVWRMLPSNNLRDDRDRKLRIFEGGEHPF-G 151

Query: 232 QKPVE 237
            KP+E
Sbjct: 152 DKPLE 155

The following BLAST results are available for this feature:

BLAST of MC11g0807 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYL9	2.6e-87	66.93	50S ribosomal protein L13, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1...	[more]
P12629	1.3e-81	63.20	50S ribosomal protein L13, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL13 P...	[more]
Q3MF94	2.6e-50	74.05	50S ribosomal protein L13 OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937...	[more]
Q8YPK6	7.5e-50	73.28	50S ribosomal protein L13 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576...	[more]
B1WQT8	9.8e-50	70.99	50S ribosomal protein L13 OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) ...	[more]

BLAST of MC11g0807 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134203.1	6.82e-178	100.00	50S ribosomal protein L13, chloroplastic [Momordica charantia]	[more]
XP_022941245.1	5.70e-161	91.13	50S ribosomal protein L13, chloroplastic-like [Cucurbita moschata]	[more]
XP_023524699.1	8.09e-161	91.13	50S ribosomal protein L13, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022981281.1	1.15e-160	91.13	50S ribosomal protein L13, chloroplastic-like [Cucurbita maxima]	[more]
KAG6607943.1	2.32e-160	90.73	50S ribosomal protein L13, chloroplastic, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of MC11g0807 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C1B3	3.30e-178	100.00	50S ribosomal protein L13, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1FT16	2.76e-161	91.13	50S ribosomal protein L13, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1IW42	5.57e-161	91.13	50S ribosomal protein L13, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1F6Z3	6.22e-158	89.11	50S ribosomal protein L13, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1IPT4	5.96e-156	88.31	50S ribosomal protein L13, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of MC11g0807 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78630.1	1.9e-88	66.93	Ribosomal protein L13 family protein	[more]
AT3G01790.1	1.2e-18	38.40	Ribosomal protein L13 family protein	[more]
AT3G01790.2	1.2e-18	38.40	Ribosomal protein L13 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036899	Ribosomal protein L13 superfamily	GENE3D	3.90.1180.10	Ribosomal protein L13	coord: 101..244 e-value: 3.4E-61 score: 207.2
IPR036899	Ribosomal protein L13 superfamily	SUPERFAMILY	52161	Ribosomal protein L13	coord: 106..240
IPR005823	Ribosomal protein L13, bacterial-type	TIGRFAM	TIGR01066	TIGR01066	coord: 106..237 e-value: 2.5E-57 score: 190.6
IPR005822	Ribosomal protein L13	PFAM	PF00572	Ribosomal_L13	coord: 110..228 e-value: 5.1E-45 score: 152.4
IPR005822	Ribosomal protein L13	PANTHER	PTHR11545	RIBOSOMAL PROTEIN L13	coord: 61..248
IPR005822	Ribosomal protein L13	HAMAP	MF_01366	Ribosomal_L13	coord: 112..238 score: 27.495642
IPR005822	Ribosomal protein L13	CDD	cd00392	Ribosomal_L13	coord: 112..225 e-value: 4.18673E-65 score: 196.186
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..248
None	No IPR available	PANTHER	PTHR11545:SF24	50S RIBOSOMAL PROTEIN L13, CHLOROPLASTIC-LIKE	coord: 61..248
IPR023563	Ribosomal protein L13, conserved site	PROSITE	PS00783	RIBOSOMAL_L13	coord: 202..224

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g0807.1	MC11g0807.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017148	negative regulation of translation
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome