MC11g0801 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0801
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Pentatricopeptide repeat-containing protein
Location	MC11: 6673565 .. 6674362 (+)
RNA-Seq Expression	MC11g0801
Synteny	MC11g0801

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAGTTATGGATCCCCAGATGCCTGTACTTTTAACATTTTGATTCATGCTGCCTATTTATGTGGGAATTCGGATGATGCATGGGAGGTGTTCGATGAAATGCGAAAGAGAGGTATTCACCCTAATGTGGTCACTTTTGGAACTTTGATTTATGGCCTTTCTCTGAATTCTAAGTTGAAAGAAGCATTGAAATTGAAAGAAGATATGGTTAGAGTGTGTGGGATTTTGCCTAATGCGTCTATATACGCTACTTTGATTAAAGGGTTCTGTGGGATTGGTGAATTGATTTTGGCTTTCGAACTAAAGGAAGAGATGGTGACAAGCAAGGTCAAAATGGACTCAGCGATTTATTCTACTTTAATTAGCGCGCTCTTTAAACATGGAAGAAAAGAAGAAGTTTGTGACATTTTAGGAGAGATGAGAGAGAATGGGTGCAAACCCGATACGGTAACCTACAATGCCATGATCAGTGGGCACTGTAAAGAAAACGATCTCGAATCTGCGTTTAGAGTTTTGGATGAGATGGTGGAGAAAGGGTGTAAGCCAGATGTGATTAGTTTCAATTCTATCATCGGAGAGTTATGCAAAAAGGGGAAATGGAATGAAGCTATTGACTTACTTGAAGACATGCCTAGACGTGGGTGCTCTCCTGATGTGGTATCATACAGGACACTTTTTGATGGGCTTTGTGAAACGATGCAGTTACAGAAAGCAACTTCCATACTGGACGAGATGATCTTCAAGGGTTATGTGCCTCGTTCTGAAAGCATAAACAAACTCGTCGACGGGTTATGCCAG

mRNA sequence

GGAAGTTATGGATCCCCAGATGCCTGTACTTTTAACATTTTGATTCATGCTGCCTATTTATGTGGGAATTCGGATGATGCATGGGAGGTGTTCGATGAAATGCGAAAGAGAGGTATTCACCCTAATGTGGTCACTTTTGGAACTTTGATTTATGGCCTTTCTCTGAATTCTAAGTTGAAAGAAGCATTGAAATTGAAAGAAGATATGGTTAGAGTGTGTGGGATTTTGCCTAATGCGTCTATATACGCTACTTTGATTAAAGGGTTCTGTGGGATTGGTGAATTGATTTTGGCTTTCGAACTAAAGGAAGAGATGGTGACAAGCAAGGTCAAAATGGACTCAGCGATTTATTCTACTTTAATTAGCGCGCTCTTTAAACATGGAAGAAAAGAAGAAGTTTGTGACATTTTAGGAGAGATGAGAGAGAATGGGTGCAAACCCGATACGGTAACCTACAATGCCATGATCAGTGGGCACTGTAAAGAAAACGATCTCGAATCTGCGTTTAGAGTTTTGGATGAGATGGTGGAGAAAGGGTGTAAGCCAGATGTGATTAGTTTCAATTCTATCATCGGAGAGTTATGCAAAAAGGGGAAATGGAATGAAGCTATTGACTTACTTGAAGACATGCCTAGACGTGGGTGCTCTCCTGATGTGGTATCATACAGGACACTTTTTGATGGGCTTTGTGAAACGATGCAGTTACAGAAAGCAACTTCCATACTGGACGAGATGATCTTCAAGGGTTATGTGCCTCGTTCTGAAAGCATAAACAAACTCGTCGACGGGTTATGCCAG

Coding sequence (CDS)

GGAAGTTATGGATCCCCAGATGCCTGTACTTTTAACATTTTGATTCATGCTGCCTATTTATGTGGGAATTCGGATGATGCATGGGAGGTGTTCGATGAAATGCGAAAGAGAGGTATTCACCCTAATGTGGTCACTTTTGGAACTTTGATTTATGGCCTTTCTCTGAATTCTAAGTTGAAAGAAGCATTGAAATTGAAAGAAGATATGGTTAGAGTGTGTGGGATTTTGCCTAATGCGTCTATATACGCTACTTTGATTAAAGGGTTCTGTGGGATTGGTGAATTGATTTTGGCTTTCGAACTAAAGGAAGAGATGGTGACAAGCAAGGTCAAAATGGACTCAGCGATTTATTCTACTTTAATTAGCGCGCTCTTTAAACATGGAAGAAAAGAAGAAGTTTGTGACATTTTAGGAGAGATGAGAGAGAATGGGTGCAAACCCGATACGGTAACCTACAATGCCATGATCAGTGGGCACTGTAAAGAAAACGATCTCGAATCTGCGTTTAGAGTTTTGGATGAGATGGTGGAGAAAGGGTGTAAGCCAGATGTGATTAGTTTCAATTCTATCATCGGAGAGTTATGCAAAAAGGGGAAATGGAATGAAGCTATTGACTTACTTGAAGACATGCCTAGACGTGGGTGCTCTCCTGATGTGGTATCATACAGGACACTTTTTGATGGGCTTTGTGAAACGATGCAGTTACAGAAAGCAACTTCCATACTGGACGAGATGATCTTCAAGGGTTATGTGCCTCGTTCTGAAAGCATAAACAAACTCGTCGACGGGTTATGCCAG

Protein sequence

GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKVKMDSAIYSTLISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVISFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEMIFKGYVPRSESINKLVDGLCQ

Homology

[Close]

BLAST of MC11g0801 vs. ExPASy Swiss-Prot
Match: Q9MAG8 (Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis thaliana OX=3702 GN=At1g53330 PE=3 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 3.0e-89
Identity = 158/264 (59.85%), Postives = 194/264 (73.48%), Query Frame = 0


Query: 3   YGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEA 62
           +G PDACT+NILIH     G  DDA ++FDEM K+ + P  VTFGTLI+GL  +S++KEA
Sbjct: 147 FGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEA 206

Query: 63  LKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKVKMDSAIYSTLIS 122
           LK+K DM++V G+ P   IYA+LIK  C IGEL  AF+LK+E    K+K+D+AIYSTLIS
Sbjct: 207 LKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLIS 266

Query: 123 ALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKP 182
           +L K GR  EV  IL EM E GCKPDTVTYN +I+G C END ESA RVLDEMVEKG KP
Sbjct: 267 SLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKP 326

Query: 183 DVISFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSIL 242
           DVIS+N I+G   +  KW EA  L EDMPRRGCSPD +SYR +FDGLCE +Q ++A  IL
Sbjct: 327 DVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVIL 386

Query: 243 DEMIFKGYVPRSESINKLVDGLCQ 267
           DEM+FKGY PR + +   +  LC+
Sbjct: 387 DEMLFKGYKPRRDRLEGFLQKLCE 410

[Close]

BLAST of MC11g0801 vs. ExPASy Swiss-Prot
Match: Q9ASZ8 (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX=3702 GN=At1g12620 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 9.2e-46
Identity = 94/261 (36.02%), Postives = 145/261 (55.56%), Query Frame = 0


Query: 6   PDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKL 65
           PD  TF+ LI+   L G   +A E+ D M + G  P ++T   L+ GL LN K+ +A+ L
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199

Query: 66  KEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKVKMDSAIYSTLISALF 125
            + MV   G  PN   Y  ++K  C  G+  LA EL  +M   K+K+D+  YS +I  L 
Sbjct: 200 IDRMVET-GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 259

Query: 126 KHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVI 185
           K G  +   ++  EM   G K D + Y  +I G C     +   ++L +M+++   PDV+
Sbjct: 260 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 319

Query: 186 SFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEM 245
           +F+++I    K+GK  EA +L ++M +RG SPD V+Y +L DG C+  QL KA  +LD M
Sbjct: 320 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 379

Query: 246 IFKGYVPRSESINKLVDGLCQ 267
           + KG  P   + N L++G C+
Sbjct: 380 VSKGCGPNIRTFNILINGYCK 399

[Close]

BLAST of MC11g0801 vs. ExPASy Swiss-Prot
Match: Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.5e-45
Identity = 88/259 (33.98%), Postives = 146/259 (56.37%), Query Frame = 0


Query: 6   PDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKL 65
           PD  T+ ILI A         A ++ DEMR RG  P+VVT+  L+ G+    +L EA+K 
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296

Query: 66  KEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKVKMDSAIYSTLISALF 125
             DM    G  PN   +  +++  C  G  + A +L  +M+          ++ LI+ L 
Sbjct: 297 LNDMPS-SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 356

Query: 126 KHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVI 185
           + G      DIL +M ++GC+P++++YN ++ G CKE  ++ A   L+ MV +GC PD++
Sbjct: 357 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 416

Query: 186 SFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEM 245
           ++N+++  LCK GK  +A+++L  +  +GCSP +++Y T+ DGL +  +  KA  +LDEM
Sbjct: 417 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 476

Query: 246 IFKGYVPRSESINKLVDGL 265
             K   P + + + LV GL
Sbjct: 477 RAKDLKPDTITYSSLVGGL 494

[Close]

BLAST of MC11g0801 vs. ExPASy Swiss-Prot
Match: Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 2.3e-44
Identity = 89/261 (34.10%), Postives = 144/261 (55.17%), Query Frame = 0


Query: 6   PDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKL 65
           P+  TF+ LI+   L G   +A E+ D M + G  P+++T  TL+ GL L+ K  EA+ L
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL 215

Query: 66  KEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKVKMDSAIYSTLISALF 125
            + MV   G  PNA  Y  ++   C  G+  LA EL  +M    +K+D+  YS +I  L 
Sbjct: 216 IDKMVEY-GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 275

Query: 126 KHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVI 185
           KHG  +   ++  EM   G   + +TYN +I G C     +   ++L +M+++   P+V+
Sbjct: 276 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 335

Query: 186 SFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEM 245
           +F+ +I    K+GK  EA +L ++M  RG +PD ++Y +L DG C+   L KA  ++D M
Sbjct: 336 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 395

Query: 246 IFKGYVPRSESINKLVDGLCQ 267
           + KG  P   + N L++G C+
Sbjct: 396 VSKGCDPNIRTFNILINGYCK 415

[Close]

BLAST of MC11g0801 vs. ExPASy Swiss-Prot
Match: Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.5e-43
Identity = 88/261 (33.72%), Postives = 144/261 (55.17%), Query Frame = 0


Query: 6   PDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKL 65
           PD   FN L++   L     +A E+ D M + G  P ++T  TL+ GL LN K+ +A+ L
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL 215

Query: 66  KEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKVKMDSAIYSTLISALF 125
            + MV   G  PN   Y  ++   C  G+  LA EL  +M    +K+D+  YS +I  L 
Sbjct: 216 IDRMVET-GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 275

Query: 126 KHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVI 185
           K G  +   ++  EM   G K D +TYN +I G C     +   ++L +M+++   P+V+
Sbjct: 276 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 335

Query: 186 SFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEM 245
           +F+ +I    K+GK  EA  LL++M +RG +P+ ++Y +L DG C+  +L++A  ++D M
Sbjct: 336 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 395

Query: 246 IFKGYVPRSESINKLVDGLCQ 267
           I KG  P   + N L++G C+
Sbjct: 396 ISKGCDPDIMTFNILINGYCK 415

[Close]

BLAST of MC11g0801 vs. NCBI nr
Match: XP_022131752.1 (putative pentatricopeptide repeat-containing protein At1g53330 [Momordica charantia])

HSP 1 Score: 545 bits (1405), Expect = 7.57e-193
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLK 60
           GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLK
Sbjct: 145 GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLK 204

Query: 61  EALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKVKMDSAIYSTL 120
           EALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKVKMDSAIYSTL
Sbjct: 205 EALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKVKMDSAIYSTL 264

Query: 121 ISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGC 180
           ISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGC
Sbjct: 265 ISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGC 324

Query: 181 KPDVISFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATS 240
           KPDVISFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATS
Sbjct: 325 KPDVISFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATS 384

Query: 241 ILDEMIFKGYVPRSESINKLVDGLCQ 266
           ILDEMIFKGYVPRSESINKLVDGLCQ
Sbjct: 385 ILDEMIFKGYVPRSESINKLVDGLCQ 410

[Close]

BLAST of MC11g0801 vs. NCBI nr
Match: XP_023523314.1 (putative pentatricopeptide repeat-containing protein At1g53330 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 474 bits (1219), Expect = 1.45e-164
Identity = 229/266 (86.09%), Postives = 250/266 (93.98%), Query Frame = 0


Query: 1   GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLK 60
           G+YGSPDACTFNILIHAA LCG+ DDAWEVFDEM KRG+ PNVVTFGTLIYGLSLNSKL 
Sbjct: 145 GNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPKRGVKPNVVTFGTLIYGLSLNSKLD 204

Query: 61  EALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKVKMDSAIYSTL 120
           EAL+LKEDMVRV GILPNASIYATLIKGFCGIG+L LAF+LKEEMVT+KVK+DSAIYST 
Sbjct: 205 EALRLKEDMVRVYGILPNASIYATLIKGFCGIGDLNLAFKLKEEMVTNKVKLDSAIYSTF 264

Query: 121 ISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGC 180
           ISALFKHGRKEEV +IL EM ENGCKPDTVTYNAMI+G CKENDLESA++VLDEMV+KGC
Sbjct: 265 ISALFKHGRKEEVPEILAEMGENGCKPDTVTYNAMINGQCKENDLESAYKVLDEMVKKGC 324

Query: 181 KPDVISFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATS 240
           KPDVISFN+I+G LCK+GKW++A+DLL DMPRRGCSPDVVSYRTLFDGLCE MQLQ+ATS
Sbjct: 325 KPDVISFNTIMGRLCKEGKWDKAMDLLADMPRRGCSPDVVSYRTLFDGLCEMMQLQEATS 384

Query: 241 ILDEMIFKGYVPRSESINKLVDGLCQ 266
           ILDEMIFKGYVPRSESINKL+D LCQ
Sbjct: 385 ILDEMIFKGYVPRSESINKLIDRLCQ 410

[Close]

BLAST of MC11g0801 vs. NCBI nr
Match: KAG6607949.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 469 bits (1208), Expect = 6.82e-163
Identity = 229/266 (86.09%), Postives = 248/266 (93.23%), Query Frame = 0


Query: 1   GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLK 60
           G+YGSPDAC+FNILIHAA LCG+ DDAWEVFDEM KRG+ PNVVTFGTLIYGLSLNSKL 
Sbjct: 145 GNYGSPDACSFNILIHAACLCGDLDDAWEVFDEMPKRGVKPNVVTFGTLIYGLSLNSKLD 204

Query: 61  EALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKVKMDSAIYSTL 120
           EAL+LKEDMVRV  ILPNASIYATLIKGFCGIG+L LAF+LKEEMVT+KVK+DSAIYST 
Sbjct: 205 EALRLKEDMVRVYRILPNASIYATLIKGFCGIGDLNLAFKLKEEMVTNKVKLDSAIYSTF 264

Query: 121 ISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGC 180
           ISALFKHGRKEEV  IL EM ENGCKPDTVTYNAMI+G CKENDLESA+RVLDEMV+KGC
Sbjct: 265 ISALFKHGRKEEVPGILAEMGENGCKPDTVTYNAMINGQCKENDLESAYRVLDEMVKKGC 324

Query: 181 KPDVISFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATS 240
           KPDVISFN+I+G LCK+GKW++A+DLL DMPRRGCSPDVVSYRTLFDGLCE MQLQ+ATS
Sbjct: 325 KPDVISFNTIMGRLCKEGKWDKAMDLLADMPRRGCSPDVVSYRTLFDGLCEMMQLQEATS 384

Query: 241 ILDEMIFKGYVPRSESINKLVDGLCQ 266
           ILDEMIFKGYVPRSESINKLVD LCQ
Sbjct: 385 ILDEMIFKGYVPRSESINKLVDRLCQ 410

[Close]

BLAST of MC11g0801 vs. NCBI nr
Match: KAG7037464.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 469 bits (1207), Expect = 9.68e-163
Identity = 229/266 (86.09%), Postives = 247/266 (92.86%), Query Frame = 0


Query: 1   GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLK 60
           G+YGSPDACTFNILIHAA LCG+ DDAWEVFDEM KRG  PNVVTFGTLIYGLSLNSKL 
Sbjct: 145 GNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPKRGAKPNVVTFGTLIYGLSLNSKLD 204

Query: 61  EALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKVKMDSAIYSTL 120
           EAL+LKEDMVRV  ILPNASIYATLIKGFCGIG+L LAF+LKEEMVT+KVK+DSAIYST 
Sbjct: 205 EALRLKEDMVRVYRILPNASIYATLIKGFCGIGDLNLAFKLKEEMVTNKVKLDSAIYSTF 264

Query: 121 ISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGC 180
           ISA FKHGRKEEV +IL EM ENGCKPDTVTYNAMI+G CKENDLESA+RVLDEMV+KGC
Sbjct: 265 ISAFFKHGRKEEVPEILAEMGENGCKPDTVTYNAMINGQCKENDLESAYRVLDEMVKKGC 324

Query: 181 KPDVISFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATS 240
           KPDVISFN+I+G LCK+GKW++A+DLL DMPRRGCSPDVVSYRTLFDGLCE MQLQ+ATS
Sbjct: 325 KPDVISFNTIMGRLCKEGKWDKAMDLLADMPRRGCSPDVVSYRTLFDGLCEMMQLQEATS 384

Query: 241 ILDEMIFKGYVPRSESINKLVDGLCQ 266
           ILDEMIFKGYVPRSESINKLVD LCQ
Sbjct: 385 ILDEMIFKGYVPRSESINKLVDRLCQ 410

[Close]

BLAST of MC11g0801 vs. NCBI nr
Match: XP_022941521.1 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g53330 [Cucurbita moschata])

HSP 1 Score: 469 bits (1206), Expect = 2.53e-162
Identity = 229/266 (86.09%), Postives = 247/266 (92.86%), Query Frame = 0


Query: 1   GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLK 60
           G+YGSPDACTFNILIHAA LCG+ DDAWEVFDEM KRG+ PNVVTFGTLIYGLSLNSKL 
Sbjct: 163 GNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPKRGVKPNVVTFGTLIYGLSLNSKLD 222

Query: 61  EALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKVKMDSAIYSTL 120
           EAL+LKEDMVRV  ILPNASIYATLIKGFCG G+L LAF+LKEEMVT+KVK+DSAIYST 
Sbjct: 223 EALRLKEDMVRVYRILPNASIYATLIKGFCGSGDLNLAFKLKEEMVTNKVKLDSAIYSTF 282

Query: 121 ISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGC 180
           ISALFKHGRKEEV  IL EM ENGCKPDTVTYNAMI+G CKENDLESA+RVLDEMV+KGC
Sbjct: 283 ISALFKHGRKEEVPGILAEMGENGCKPDTVTYNAMINGQCKENDLESAYRVLDEMVKKGC 342

Query: 181 KPDVISFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATS 240
           KPDVISFN+I+G LCK+GKW++A+DLL DMPRRGCSPDVVSYRTLFDGLCE MQLQ+ATS
Sbjct: 343 KPDVISFNTIMGRLCKEGKWDKAMDLLADMPRRGCSPDVVSYRTLFDGLCEMMQLQEATS 402

Query: 241 ILDEMIFKGYVPRSESINKLVDGLCQ 266
           ILDEMIFKGYVPRSESINKLVD LCQ
Sbjct: 403 ILDEMIFKGYVPRSESINKLVDRLCQ 428

[Close]

BLAST of MC11g0801 vs. ExPASy TrEMBL
Match: A0A6J1BRW9 (putative pentatricopeptide repeat-containing protein At1g53330 OS=Momordica charantia OX=3673 GN=LOC111004838 PE=4 SV=1)

HSP 1 Score: 545 bits (1405), Expect = 3.67e-193
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLK 60
           GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLK
Sbjct: 145 GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLK 204

Query: 61  EALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKVKMDSAIYSTL 120
           EALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKVKMDSAIYSTL
Sbjct: 205 EALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKVKMDSAIYSTL 264

Query: 121 ISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGC 180
           ISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGC
Sbjct: 265 ISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGC 324

Query: 181 KPDVISFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATS 240
           KPDVISFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATS
Sbjct: 325 KPDVISFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATS 384

Query: 241 ILDEMIFKGYVPRSESINKLVDGLCQ 266
           ILDEMIFKGYVPRSESINKLVDGLCQ
Sbjct: 385 ILDEMIFKGYVPRSESINKLVDGLCQ 410

[Close]

BLAST of MC11g0801 vs. ExPASy TrEMBL
Match: A0A6J1FLC2 (LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g53330 OS=Cucurbita moschata OX=3662 GN=LOC111446799 PE=4 SV=1)

HSP 1 Score: 469 bits (1206), Expect = 1.23e-162
Identity = 229/266 (86.09%), Postives = 247/266 (92.86%), Query Frame = 0


Query: 1   GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLK 60
           G+YGSPDACTFNILIHAA LCG+ DDAWEVFDEM KRG+ PNVVTFGTLIYGLSLNSKL 
Sbjct: 163 GNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPKRGVKPNVVTFGTLIYGLSLNSKLD 222

Query: 61  EALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKVKMDSAIYSTL 120
           EAL+LKEDMVRV  ILPNASIYATLIKGFCG G+L LAF+LKEEMVT+KVK+DSAIYST 
Sbjct: 223 EALRLKEDMVRVYRILPNASIYATLIKGFCGSGDLNLAFKLKEEMVTNKVKLDSAIYSTF 282

Query: 121 ISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGC 180
           ISALFKHGRKEEV  IL EM ENGCKPDTVTYNAMI+G CKENDLESA+RVLDEMV+KGC
Sbjct: 283 ISALFKHGRKEEVPGILAEMGENGCKPDTVTYNAMINGQCKENDLESAYRVLDEMVKKGC 342

Query: 181 KPDVISFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATS 240
           KPDVISFN+I+G LCK+GKW++A+DLL DMPRRGCSPDVVSYRTLFDGLCE MQLQ+ATS
Sbjct: 343 KPDVISFNTIMGRLCKEGKWDKAMDLLADMPRRGCSPDVVSYRTLFDGLCEMMQLQEATS 402

Query: 241 ILDEMIFKGYVPRSESINKLVDGLCQ 266
           ILDEMIFKGYVPRSESINKLVD LCQ
Sbjct: 403 ILDEMIFKGYVPRSESINKLVDRLCQ 428

[Close]

BLAST of MC11g0801 vs. ExPASy TrEMBL
Match: A0A6J1J467 (putative pentatricopeptide repeat-containing protein At1g53330 OS=Cucurbita maxima OX=3661 GN=LOC111481084 PE=4 SV=1)

HSP 1 Score: 467 bits (1202), Expect = 2.69e-162
Identity = 227/266 (85.34%), Postives = 247/266 (92.86%), Query Frame = 0


Query: 1   GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLK 60
           G+YGSPDACTFNILIHAA LCG+ DDAWEVFDEM KRG+ PNVVTFGTLIYGLSLNSKL 
Sbjct: 145 GNYGSPDACTFNILIHAACLCGDLDDAWEVFDEMPKRGVKPNVVTFGTLIYGLSLNSKLD 204

Query: 61  EALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKVKMDSAIYSTL 120
           EAL+LKEDMVRV  ILPNASIYATLIKGFCGIG+L LAF+LKEEMVT+KVK+DSAIYST 
Sbjct: 205 EALRLKEDMVRVYRILPNASIYATLIKGFCGIGDLNLAFKLKEEMVTNKVKLDSAIYSTF 264

Query: 121 ISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGC 180
           ISALFKHGRKEEV +IL EM ENGCKPDTVTYN MI+G CKENDLESA+RVLDEMV+KGC
Sbjct: 265 ISALFKHGRKEEVPEILAEMGENGCKPDTVTYNTMINGQCKENDLESAYRVLDEMVKKGC 324

Query: 181 KPDVISFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATS 240
           KPDVISFN+I+  LCK+GKW++A+DLL DMPRRGCSPDVVSYRTLFDGLCE MQLQ+ATS
Sbjct: 325 KPDVISFNTIMERLCKEGKWDKAMDLLADMPRRGCSPDVVSYRTLFDGLCEMMQLQEATS 384

Query: 241 ILDEMIFKGYVPRSESINKLVDGLCQ 266
           ILDEMIFKGYVPRSESINKL+D LCQ
Sbjct: 385 ILDEMIFKGYVPRSESINKLIDRLCQ 410

[Close]

BLAST of MC11g0801 vs. ExPASy TrEMBL
Match: A0A5A7VBA5 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G004190 PE=4 SV=1)

HSP 1 Score: 454 bits (1167), Expect = 1.03e-156
Identity = 222/266 (83.46%), Postives = 242/266 (90.98%), Query Frame = 0


Query: 1   GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLK 60
           G++GSPDACTFNILIHAA LCG+ D  W VFDEMRKRG+ PNVVTFGTLIYGLSLNSKLK
Sbjct: 163 GNHGSPDACTFNILIHAACLCGDLDAVWGVFDEMRKRGVQPNVVTFGTLIYGLSLNSKLK 222

Query: 61  EALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKVKMDSAIYSTL 120
           EAL+LKEDMVRV  I PNASIY TLIKGFCG+GEL  AF+LKEEMVTSKVK+DS IYSTL
Sbjct: 223 EALRLKEDMVRVYMIKPNASIYTTLIKGFCGVGELNFAFKLKEEMVTSKVKLDSKIYSTL 282

Query: 121 ISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGC 180
           ISALFKHGRKEEV DIL EM ENGCKPDT TYNAMI+GHCKENDLESA RV+DEMVEKGC
Sbjct: 283 ISALFKHGRKEEVSDILREMGENGCKPDTATYNAMINGHCKENDLESANRVVDEMVEKGC 342

Query: 181 KPDVISFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATS 240
           KPDVISFN+IIG LCK+GK ++A+DLLEDMPRRGC PDV+SYR +FDGLCE MQL++ATS
Sbjct: 343 KPDVISFNTIIGGLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIVFDGLCEMMQLKEATS 402

Query: 241 ILDEMIFKGYVPRSESINKLVDGLCQ 266
           ILDEMIFKGYVPR+ESINKLVD LCQ
Sbjct: 403 ILDEMIFKGYVPRNESINKLVDRLCQ 428

[Close]

BLAST of MC11g0801 vs. ExPASy TrEMBL
Match: A0A1S3BT71 (putative pentatricopeptide repeat-containing protein At1g53330 OS=Cucumis melo OX=3656 GN=LOC103493464 PE=4 SV=1)

HSP 1 Score: 454 bits (1167), Expect = 5.04e-156
Identity = 222/266 (83.46%), Postives = 242/266 (90.98%), Query Frame = 0


Query: 1   GSYGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLK 60
           G++GSPDACTFNILIHAA LCG+ D  W VFDEMRKRG+ PNVVTFGTLIYGLSLNSKLK
Sbjct: 211 GNHGSPDACTFNILIHAACLCGDLDAVWGVFDEMRKRGVQPNVVTFGTLIYGLSLNSKLK 270

Query: 61  EALKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKVKMDSAIYSTL 120
           EAL+LKEDMVRV  I PNASIY TLIKGFCG+GEL  AF+LKEEMVTSKVK+DS IYSTL
Sbjct: 271 EALRLKEDMVRVYMIKPNASIYTTLIKGFCGVGELNFAFKLKEEMVTSKVKLDSKIYSTL 330

Query: 121 ISALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGC 180
           ISALFKHGRKEEV DIL EM ENGCKPDT TYNAMI+GHCKENDLESA RV+DEMVEKGC
Sbjct: 331 ISALFKHGRKEEVSDILREMGENGCKPDTATYNAMINGHCKENDLESANRVVDEMVEKGC 390

Query: 181 KPDVISFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATS 240
           KPDVISFN+IIG LCK+GK ++A+DLLEDMPRRGC PDV+SYR +FDGLCE MQL++ATS
Sbjct: 391 KPDVISFNTIIGGLCKEGKLDKAMDLLEDMPRRGCPPDVLSYRIVFDGLCEMMQLKEATS 450

Query: 241 ILDEMIFKGYVPRSESINKLVDGLCQ 266
           ILDEMIFKGYVPR+ESINKLVD LCQ
Sbjct: 451 ILDEMIFKGYVPRNESINKLVDRLCQ 476

[Close]

BLAST of MC11g0801 vs. TAIR 10
Match: AT1G53330.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 329.7 bits (844), Expect = 2.1e-90
Identity = 158/264 (59.85%), Postives = 194/264 (73.48%), Query Frame = 0


Query: 3   YGSPDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEA 62
           +G PDACT+NILIH     G  DDA ++FDEM K+ + P  VTFGTLI+GL  +S++KEA
Sbjct: 147 FGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEA 206

Query: 63  LKLKEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKVKMDSAIYSTLIS 122
           LK+K DM++V G+ P   IYA+LIK  C IGEL  AF+LK+E    K+K+D+AIYSTLIS
Sbjct: 207 LKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLIS 266

Query: 123 ALFKHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKP 182
           +L K GR  EV  IL EM E GCKPDTVTYN +I+G C END ESA RVLDEMVEKG KP
Sbjct: 267 SLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKP 326

Query: 183 DVISFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSIL 242
           DVIS+N I+G   +  KW EA  L EDMPRRGCSPD +SYR +FDGLCE +Q ++A  IL
Sbjct: 327 DVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVIL 386

Query: 243 DEMIFKGYVPRSESINKLVDGLCQ 267
           DEM+FKGY PR + +   +  LC+
Sbjct: 387 DEMLFKGYKPRRDRLEGFLQKLCE 410

[Close]

BLAST of MC11g0801 vs. TAIR 10
Match: AT1G12620.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 185.3 bits (469), Expect = 6.5e-47
Identity = 94/261 (36.02%), Postives = 145/261 (55.56%), Query Frame = 0


Query: 6   PDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKL 65
           PD  TF+ LI+   L G   +A E+ D M + G  P ++T   L+ GL LN K+ +A+ L
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLL 199

Query: 66  KEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKVKMDSAIYSTLISALF 125
            + MV   G  PN   Y  ++K  C  G+  LA EL  +M   K+K+D+  YS +I  L 
Sbjct: 200 IDRMVET-GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 259

Query: 126 KHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVI 185
           K G  +   ++  EM   G K D + Y  +I G C     +   ++L +M+++   PDV+
Sbjct: 260 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 319

Query: 186 SFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEM 245
           +F+++I    K+GK  EA +L ++M +RG SPD V+Y +L DG C+  QL KA  +LD M
Sbjct: 320 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 379

Query: 246 IFKGYVPRSESINKLVDGLCQ 267
           + KG  P   + N L++G C+
Sbjct: 380 VSKGCGPNIRTFNILINGYCK 399

[Close]

BLAST of MC11g0801 vs. TAIR 10
Match: AT1G09900.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 183.3 bits (464), Expect = 2.5e-46
Identity = 88/259 (33.98%), Postives = 146/259 (56.37%), Query Frame = 0


Query: 6   PDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKL 65
           PD  T+ ILI A         A ++ DEMR RG  P+VVT+  L+ G+    +L EA+K 
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296

Query: 66  KEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKVKMDSAIYSTLISALF 125
             DM    G  PN   +  +++  C  G  + A +L  +M+          ++ LI+ L 
Sbjct: 297 LNDMPS-SGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLC 356

Query: 126 KHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVI 185
           + G      DIL +M ++GC+P++++YN ++ G CKE  ++ A   L+ MV +GC PD++
Sbjct: 357 RKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIV 416

Query: 186 SFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEM 245
           ++N+++  LCK GK  +A+++L  +  +GCSP +++Y T+ DGL +  +  KA  +LDEM
Sbjct: 417 TYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM 476

Query: 246 IFKGYVPRSESINKLVDGL 265
             K   P + + + LV GL
Sbjct: 477 RAKDLKPDTITYSSLVGGL 494

[Close]

BLAST of MC11g0801 vs. TAIR 10
Match: AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 180.6 bits (457), Expect = 1.6e-45
Identity = 89/261 (34.10%), Postives = 144/261 (55.17%), Query Frame = 0


Query: 6   PDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKL 65
           P+  TF+ LI+   L G   +A E+ D M + G  P+++T  TL+ GL L+ K  EA+ L
Sbjct: 156 PNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLL 215

Query: 66  KEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKVKMDSAIYSTLISALF 125
            + MV   G  PNA  Y  ++   C  G+  LA EL  +M    +K+D+  YS +I  L 
Sbjct: 216 IDKMVEY-GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 275

Query: 126 KHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVI 185
           KHG  +   ++  EM   G   + +TYN +I G C     +   ++L +M+++   P+V+
Sbjct: 276 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 335

Query: 186 SFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEM 245
           +F+ +I    K+GK  EA +L ++M  RG +PD ++Y +L DG C+   L KA  ++D M
Sbjct: 336 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 395

Query: 246 IFKGYVPRSESINKLVDGLCQ 267
           + KG  P   + N L++G C+
Sbjct: 396 VSKGCDPNIRTFNILINGYCK 415

[Close]

BLAST of MC11g0801 vs. TAIR 10
Match: AT1G12775.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 177.9 bits (450), Expect = 1.0e-44
Identity = 88/261 (33.72%), Postives = 144/261 (55.17%), Query Frame = 0


Query: 6   PDACTFNILIHAAYLCGNSDDAWEVFDEMRKRGIHPNVVTFGTLIYGLSLNSKLKEALKL 65
           PD   FN L++   L     +A E+ D M + G  P ++T  TL+ GL LN K+ +A+ L
Sbjct: 156 PDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVL 215

Query: 66  KEDMVRVCGILPNASIYATLIKGFCGIGELILAFELKEEMVTSKVKMDSAIYSTLISALF 125
            + MV   G  PN   Y  ++   C  G+  LA EL  +M    +K+D+  YS +I  L 
Sbjct: 216 IDRMVET-GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 275

Query: 126 KHGRKEEVCDILGEMRENGCKPDTVTYNAMISGHCKENDLESAFRVLDEMVEKGCKPDVI 185
           K G  +   ++  EM   G K D +TYN +I G C     +   ++L +M+++   P+V+
Sbjct: 276 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 335

Query: 186 SFNSIIGELCKKGKWNEAIDLLEDMPRRGCSPDVVSYRTLFDGLCETMQLQKATSILDEM 245
           +F+ +I    K+GK  EA  LL++M +RG +P+ ++Y +L DG C+  +L++A  ++D M
Sbjct: 336 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 395

Query: 246 IFKGYVPRSESINKLVDGLCQ 267
           I KG  P   + N L++G C+
Sbjct: 396 ISKGCDPDIMTFNILINGYCK 415

The following BLAST results are available for this feature:

BLAST of MC11g0801 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MAG8	3.0e-89	59.85	Putative pentatricopeptide repeat-containing protein At1g53330 OS=Arabidopsis th...	[more]
Q9ASZ8	9.2e-46	36.02	Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX...	[more]
Q3EDF8	3.5e-45	33.98	Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX...	[more]
Q0WKV3	2.3e-44	34.10	Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop...	[more]
Q9LPX2	1.5e-43	33.72	Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop...	[more]

BLAST of MC11g0801 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022131752.1	7.57e-193	100.00	putative pentatricopeptide repeat-containing protein At1g53330 [Momordica charan...	[more]
XP_023523314.1	1.45e-164	86.09	putative pentatricopeptide repeat-containing protein At1g53330 [Cucurbita pepo s...	[more]
KAG6607949.1	6.82e-163	86.09	putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros...	[more]
KAG7037464.1	9.68e-163	86.09	putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros...	[more]
XP_022941521.1	2.53e-162	86.09	LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g53...	[more]

BLAST of MC11g0801 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BRW9	3.67e-193	100.00	putative pentatricopeptide repeat-containing protein At1g53330 OS=Momordica char...	[more]
A0A6J1FLC2	1.23e-162	86.09	LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At1g53...	[more]
A0A6J1J467	2.69e-162	85.34	putative pentatricopeptide repeat-containing protein At1g53330 OS=Cucurbita maxi...	[more]
A0A5A7VBA5	1.03e-156	83.46	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]
A0A1S3BT71	5.04e-156	83.46	putative pentatricopeptide repeat-containing protein At1g53330 OS=Cucumis melo O...	[more]

BLAST of MC11g0801 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53330.1	2.1e-90	59.85	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G12620.1	6.5e-47	36.02	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G09900.1	2.5e-46	33.98	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G12300.1	1.6e-45	34.10	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G12775.1	1.0e-44	33.72	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 141..211 e-value: 9.4E-28 score: 99.0 coord: 2..70 e-value: 1.0E-18 score: 69.5 coord: 71..140 e-value: 6.3E-14 score: 53.9 coord: 212..266 e-value: 2.6E-9 score: 38.8
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 74..106 e-value: 1.9E-6 score: 27.5 coord: 213..245 e-value: 1.2E-7 score: 31.4
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 220..252 e-value: 3.5E-5 score: 21.7 coord: 9..43 e-value: 3.9E-9 score: 34.1 coord: 150..184 e-value: 1.4E-13 score: 48.1 coord: 116..149 e-value: 6.6E-10 score: 36.5 coord: 185..219 e-value: 1.0E-9 score: 35.9 coord: 44..79 e-value: 1.1E-4 score: 20.2 coord: 81..113 e-value: 2.9E-4 score: 18.8
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 116..145 e-value: 7.6E-7 score: 29.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 147..196 e-value: 3.3E-20 score: 72.0 coord: 6..53 e-value: 5.3E-15 score: 55.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 218..252 score: 10.840783
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 183..217 score: 13.493418
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 7..41 score: 12.474017
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 78..112 score: 9.108898
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 148..182 score: 14.885503
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 113..147 score: 12.386327
None	No IPR available	PANTHER	PTHR47933:SF24	OS05G0207200 PROTEIN	coord: 2..266
None	No IPR available	PANTHER	PTHR47933	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIAL	coord: 2..266

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g0801.1	MC11g0801.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0048364	root development
biological_process	GO:0048367	shoot system development
molecular_function	GO:0005515	protein binding