MC11g0726 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0726
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	F-box protein SKIP31
Location	MC11: 5861136 .. 5864994 (-)
RNA-Seq Expression	MC11g0726
Synteny	MC11g0726

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GTAAGCCCAACTCTAGGTGTAATGGGCATCGACCCAACTTGTAAGTGTGGGCCTTGGGCCCAATTCGAAGAGTCTCGCCCCGGGATGGTCTCGTTGTTCTCACCTGGTACGGTTCCCGTGATTTCGGGTGGGTTATTGGGGGTTGGTCGTCATTCTAAAGGCCGGAACTGCCGTCTGCCAGCTCCGGTCACCGGCCGACTGAGATTATTTTATCGGCTTATTCACAATCCGATCTTTGCCGGAGTTCGAAATCCAAACCACGTCGCTTGATGTGACATGGCCATTCCAGACGATGAAGACGAGTTCTTGGCTCAATTCCTCGAATCAGAGGTCCTCTCGGAGGTCTCCGACAAGGTTTTGTATCTTTTCCTTTATCCATTTATCTGATATTGTTTAAGGAGTCGAATCGGTTAGAATATAAGAAAATTAAGGAGCGTTATTCAAACTTGTTCATTTTTTTCTCCAAATTCTATCATGTTCGTGCTGGTTTAGGGTTGATTATGTCGAATTGTGATGAAATTGGATGTGGAAATTTGTAGGAAGAGGTGAACGCGGAGGAGGAACCAAAACCTAAGAGAGTCCGAATCGAACATAGTAGCCCTAGTGTAGAAAGAGAGGTAGCTTCCGTCACTACTTCGTCCTCTCAATCCAATGGCGTCGTTCCCGGGAGGATTGAGACTGGAATTTTCAGTAAAATTCCTCCGGAACTCTTCCGTCATATCCTGAAGTTTCTCTCATCCGAGGTAGTGTGGAGAGTGTTTTTTGTTGCTTTGCATGCTCCCTCTCCATTTCTGTTCTTCACCTAAATTGCGTCTTTTGGTGCAGGATCTGATTTCCTGCTCACTTGTTTGTCGGTTTTTAAATTCTGTGGCGTCTGATGAATCATTATGGCGAAGATTGTGAGTAATGGCACCTTATGTATCCTATCTATTTGTGTTTGATCTGTACGCTTCTTTATAGCGAAACTTAAATTCTATTTCCATTGTGTCCATGGACACTAATGCCGGCAATTCGTCTGCAGATATTGTCTGCGATGGGGTCTGTTGACAACCAAGAAGCTGCGCCAATGTCCTTGGAAAAGACTTTATATTCAGGTTTTTCTTTTTGTATTATACCGATTCTCTTATATCTCCCATCATTCTTTGTGAGCTGGGAGGACTATGGGGGTTTTATTAGTTGATTTAATTCCCCTTTTGATGATGAACTACTAATCACCCATTTTTTCTGAAATCCTAGCGTGATGGAGAGGATATGACCGAACTGGTTCGAGATTGCTCTTCTGAGTTTAAAGAGTACTACATCCAAATGCAAGCAGCAAAAAGAAGCCAAGCTCCTCTTCTTTCGCAGGTATCTGGTTTCCATTCGAGTTCTTAACTTTGCAGAAGAATTGCTCATATAGTTTCTTTATCCTCATGTTTAAAGATAGGGTTGAATAAAGGTTCATGCATGGTTTGCTTGGAACCCAACATCCGTTATAGATTTTGTCCTAGATTATCTCCCTCCTTAGTCTTTACTAATTCTATTTTCCCGAGAATAGAAAAAAACCATTGACATTGAGCATGTGCAGGTGCAGGATGACCAAATAATTCTTGATAGGACCGTGGCTGATCAAGTATCTACATGGAAAAGCAGCAGGGGGTTGACTGACAAGATAGTCGTAGATCACACTTGCTCAGGAGAAACATGTTCATATTACCAAATTGGAGATGCATTTGTATGTGAAAAGACTGGACTTGTTCATGGTAGGATATTTTTTTCTATTTTATATTAAAATTTGATCGTAGATTACCCAGTGGCTTCCTTACCTGCATAATTGATGAGTCGCATATTTTATTCCCAGTATGTGATGACACATGCAGAGAAGTCATTATGGACCTGAACGATGAACAACTTGTCTGCAGAATATCTGGACACTGCTTTGACACGCTGCTTTTGCCAGATTCTATGGAACCAGATACTGTGAGTACAAACCTCTTTCCAATGTTACTGACCCAGATCTTTCTTCTGCTATCTAACTTCCTATCAGAGGGCTCACTACTGAAAATAGTGCGAGACTATAAAATGGGATTTTTATTGGTTGTTCACTAGGAAGATAATAGAGATTTTGCCACCCTTTTACTTGGTCTGTCGAAGGCCTATGATTTGTTTCTGAACATGAAACCAAAGTTGAAGGCCTCTAACTTATGACTTGTTCTTCTACCGACTGCAGTAGCCAGCTCTAGATTAAGCTTCTTTACCTTTTTTGTTTATTCTTGAAGGTCTCAATTGAGTACACTAGTAATTTAAGCTTTATATCAACTTATCAACAGGCTTAAGCTATTAGGTCAATGTAAATTTAATCATTTAACATATGTTCAGCACTTCCCTTCACATTTAGGCTTGAATATTTGTTTGATTTAACATGTGAGGAATGAATGGTTGGGATTTGAAACTATGACTTCCTGTTTTGATACCCAAAATTTTAATTTGTTGGAGTCGGATGACTTTGATCATATATTCTCACCCTTACATGTAAGCTCGAGTGTTAGTAGATTCACAAGGTTCTTCAACATGCAGATATATGAAACAAAGAAAACAACATTGCAAAATTTGCAACTTGAGACCTCGTGTACTAATACCATGTTTCACCACTTGGTTTAAATTATTAGATTAAGACATGTTTATTTGATCATGCTTTAAGTCTCAATCATGTCTGAGCTCTAATTTGCCTTAAGGATAGGGCTTCTGCCCAAGAGGTACAAACTAGAATGGAGTAATAACGTAAAAATTGATTATATTTCCTGCATATTTTTTCTAATTCTTTGCAGTGAAAAAATGCCTTCCTCATTTAACTTTTATGATGTTTGATTTTAATATATATATATATCATTCCTATTTTGCAAAAGATGGTTTTGTTCCTCCAATTCTTGGTTGGGGGAAACTTCTTGCTTCCTTGTTTCCATGCTGGAATCCTATAAAAGATGTAACTTATTCTTGTTATTTTTATTTTATTTTTTCTTAAATTGCATTACATGGTTTTCACATGGACGATGGGAATCATTCTTTTATGATGTGCTGGTTGCATCTTTCTGAGGCAGAAGTATATATACTTTGGATTGATAATATTGTGCAGTTGGTGTGTATCTTGTCATTTTCCAGTTCAAATTACTGACCACCTTGACATGGTATACTTATTTTCTACACATCCAACATCATAAATGCTTGGCCTAATTTTAGTATTCTTTCAACTGTTATGCAACCTGAGATTCCATTTCATAATGCTTAGCGTCTAATATCTTTTCATGTCTTCATCTTGTAAGATGGCTTGTTTTTGTTCTCTGAGTTCACCGATTTCTGTTGGATGTTGCATCGAAACACTTTCAGGAACAGCAACAAGGCGGTGTAACCGACGAGGCAGAACCATTCATGGGTTTGGGCCGTTTCGGTACAACTACTCTATAATCATCGTTTATTGTTGTGTATGTGTTTTTGTTTAGATTGAACAATACATATCGTTATTTAAGATGTTAATTTTGTGGCAGCTCGAGCTTACTTGTTGGGTTATAACTGCGCCGACGAGGCAGAGCTAGAAGCTACTTTGAGGTTCTGCTGATTCAAAACTGGAAATTGAAGGAGTTGGGTGGCATCAATTTCTTTTTTTGAGAGGAGACTGTATGCCTCTTTATCTTTATGTATGGGTTTATATTAGTTAAGTTTCATGTGGATTATGTAACTAAATTAGGTAAATATATATACATAATCTTATCAACTTCCTTGCATCATCCAAAGCCTGCTCTCTCTCTCTCATGTAAATTTCAATGAGAGATTATGGTCATGTTTTTCGGATATCGATAAGCAAAGGTTCATCGACTAATATGTG

mRNA sequence

GTAAGCCCAACTCTAGGTGTAATGGGCATCGACCCAACTTGTAAGTGTGGGCCTTGGGCCCAATTCGAAGAGTCTCGCCCCGGGATGGTCTCGTTGTTCTCACCTGGTACGGTTCCCGTGATTTCGGGTGGGTTATTGGGGGTTGGTCGTCATTCTAAAGGCCGGAACTGCCGTCTGCCAGCTCCGGTCACCGGCCGACTGAGATTATTTTATCGGCTTATTCACAATCCGATCTTTGCCGGAGTTCGAAATCCAAACCACGTCGCTTGATGTGACATGGCCATTCCAGACGATGAAGACGAGTTCTTGGCTCAATTCCTCGAATCAGAGGTCCTCTCGGAGGTCTCCGACAAGGAAGAGGTGAACGCGGAGGAGGAACCAAAACCTAAGAGAGTCCGAATCGAACATAGTAGCCCTAGTGTAGAAAGAGAGGTAGCTTCCGTCACTACTTCGTCCTCTCAATCCAATGGCGTCGTTCCCGGGAGGATTGAGACTGGAATTTTCAGTAAAATTCCTCCGGAACTCTTCCGTCATATCCTGAAGTTTCTCTCATCCGAGGATCTGATTTCCTGCTCACTTGTTTGTCGGTTTTTAAATTCTGTGGCGTCTGATGAATCATTATGGCGAAGATTATATTGTCTGCGATGGGGTCTGTTGACAACCAAGAAGCTGCGCCAATGTCCTTGGAAAAGACTTTATATTCAGCGTGATGGAGAGGATATGACCGAACTGGTTCGAGATTGCTCTTCTGAGTTTAAAGAGTACTACATCCAAATGCAAGCAGCAAAAAGAAGCCAAGCTCCTCTTCTTTCGCAGGTGCAGGATGACCAAATAATTCTTGATAGGACCGTGGCTGATCAAGTATCTACATGGAAAAGCAGCAGGGGGTTGACTGACAAGATAGTCGTAGATCACACTTGCTCAGGAGAAACATGTTCATATTACCAAATTGGAGATGCATTTGTATGTGAAAAGACTGGACTTGTTCATGTATGTGATGACACATGCAGAGAAGTCATTATGGACCTGAACGATGAACAACTTGTCTGCAGAATATCTGGACACTGCTTTGACACGCTGCTTTTGCCAGATTCTATGGAACCAGATACTGAACAGCAACAAGGCGGTGTAACCGACGAGGCAGAACCATTCATGGGTTTGGGCCGTTTCGCTCGAGCTTACTTGTTGGGTTATAACTGCGCCGACGAGGCAGAGCTAGAAGCTACTTTGAGGTTCTGCTGATTCAAAACTGGAAATTGAAGGAGTTGGGTGGCATCAATTTCTTTTTTTGAGAGGAGACTGTATGCCTCTTTATCTTTATGTATGGGTTTATATTAGTTAAGTTTCATGTGGATTATGTAACTAAATTAGGTAAATATATATACATAATCTTATCAACTTCCTTGCATCATCCAAAGCCTGCTCTCTCTCTCTCATGTAAATTTCAATGAGAGATTATGGTCATGTTTTTCGGATATCGATAAGCAAAGGTTCATCGACTAATATGTG

Coding sequence (CDS)

ATGGCCATTCCAGACGATGAAGACGAGTTCTTGGCTCAATTCCTCGAATCAGAGGTCCTCTCGGAGGTCTCCGACAAGGAAGAGGTGAACGCGGAGGAGGAACCAAAACCTAAGAGAGTCCGAATCGAACATAGTAGCCCTAGTGTAGAAAGAGAGGTAGCTTCCGTCACTACTTCGTCCTCTCAATCCAATGGCGTCGTTCCCGGGAGGATTGAGACTGGAATTTTCAGTAAAATTCCTCCGGAACTCTTCCGTCATATCCTGAAGTTTCTCTCATCCGAGGATCTGATTTCCTGCTCACTTGTTTGTCGGTTTTTAAATTCTGTGGCGTCTGATGAATCATTATGGCGAAGATTATATTGTCTGCGATGGGGTCTGTTGACAACCAAGAAGCTGCGCCAATGTCCTTGGAAAAGACTTTATATTCAGCGTGATGGAGAGGATATGACCGAACTGGTTCGAGATTGCTCTTCTGAGTTTAAAGAGTACTACATCCAAATGCAAGCAGCAAAAAGAAGCCAAGCTCCTCTTCTTTCGCAGGTGCAGGATGACCAAATAATTCTTGATAGGACCGTGGCTGATCAAGTATCTACATGGAAAAGCAGCAGGGGGTTGACTGACAAGATAGTCGTAGATCACACTTGCTCAGGAGAAACATGTTCATATTACCAAATTGGAGATGCATTTGTATGTGAAAAGACTGGACTTGTTCATGTATGTGATGACACATGCAGAGAAGTCATTATGGACCTGAACGATGAACAACTTGTCTGCAGAATATCTGGACACTGCTTTGACACGCTGCTTTTGCCAGATTCTATGGAACCAGATACTGAACAGCAACAAGGCGGTGTAACCGACGAGGCAGAACCATTCATGGGTTTGGGCCGTTTCGCTCGAGCTTACTTGTTGGGTTATAACTGCGCCGACGAGGCAGAGCTAGAAGCTACTTTGAGGTTCTGCTGA

Protein sequence

MAIPDDEDEFLAQFLESEVLSEVSDKEEVNAEEEPKPKRVRIEHSSPSVEREVASVTTSSSQSNGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLYCLRWGLLTTKKLRQCPWKRLYIQRDGEDMTELVRDCSSEFKEYYIQMQAAKRSQAPLLSQVQDDQIILDRTVADQVSTWKSSRGLTDKIVVDHTCSGETCSYYQIGDAFVCEKTGLVHVCDDTCREVIMDLNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQGGVTDEAEPFMGLGRFARAYLLGYNCADEAELEATLRFC

Homology

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BLAST of MC11g0726 vs. ExPASy Swiss-Prot
Match: Q9FHK0 (F-box protein SKIP31 OS=Arabidopsis thaliana OX=3702 GN=SKIP31 PE=1 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 2.0e-95
Identity = 187/324 (57.72%), Postives = 230/324 (70.99%), Query Frame = 0


Query: 1   MAIPDDEDEFLAQFLESEVLSEVSDKEEVNAEEEPKPKRVRIEH-SSPSVEREVASVTTS 60
           M++ D+EDE  A+FLESEV S V DKEE    +EP+ KR RIE   + ++E++       
Sbjct: 1   MSVSDEEDECFARFLESEV-SSVEDKEET---KEPEAKRQRIEKGETKALEKDEDQKENG 60

Query: 61  SSQSNGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRL 120
           +         RIE+G+F+ +P ELFRHILKFLSSEDL+SCSLVC+FLN  A+DESLWRRL
Sbjct: 61  NKDKTDA--KRIESGVFTNVPTELFRHILKFLSSEDLVSCSLVCKFLNFAAADESLWRRL 120

Query: 121 YCLRWGL-LTTKKLRQCPWKRLYIQRDGEDMTELVRDCSSEFKEYYIQMQAAKRSQAPLL 180
           YC+RWGL L ++KLR+  WK+LYI RD +DM ELVR C S+FKEYY+ MQAAKRSQAPL 
Sbjct: 121 YCIRWGLTLPSRKLRESAWKKLYIDRDEQDMIELVRTCPSDFKEYYVHMQAAKRSQAPLP 180

Query: 181 SQVQDDQIILDRTVADQVSTWKSSRGLTDKIVVDHTCSGETCSYYQIGDAFVCEKTGLVH 240
           SQ+ DD+IILD TV +QVS WK S+GLTDK V  H C G  CSY+QI D F+C++TG VH
Sbjct: 181 SQMVDDRIILDNTVLEQVSLWKKSKGLTDKAVTGHICLGTKCSYHQIDDVFICKETGNVH 240

Query: 241 VCDDTCREVIMDLNDEQLVCRISGHCFDTLLLPDSMEPDTEQ-QQGGVTDEAEPFMGLGR 300
           VCDD C+EVI+    + +VC ISG C DTLL+    EPD +   +     EAE F    R
Sbjct: 241 VCDDNCKEVILSPEGDLMVCTISGVCSDTLLV--QTEPDADGCYEEEAELEAEVFTDKSR 300

Query: 301 FARAYLLGYNCADEAELEATLRFC 322
            ARA+ LGYNC DE ELE TLRFC
Sbjct: 301 LARAFELGYNCDDEQELERTLRFC 316

[Close]

BLAST of MC11g0726 vs. NCBI nr
Match: XP_022140264.1 (F-box protein SKIP31 [Momordica charantia])

HSP 1 Score: 642 bits (1656), Expect = 2.68e-232
Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0


Query: 1   MAIPDDEDEFLAQFLESEVLSEVSDKEEVNAEEEPKPKRVRIEHSSPSVEREVASVTTSS 60
           MAIPDDEDEFLAQFLESEVLSEVSDKEEVNAEEEPKPKRVRIEHSSPSVEREVASVTTSS
Sbjct: 1   MAIPDDEDEFLAQFLESEVLSEVSDKEEVNAEEEPKPKRVRIEHSSPSVEREVASVTTSS 60

Query: 61  SQSNGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQSNGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY
Sbjct: 61  SQSNGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120

Query: 121 CLRWGLLTTKKLRQCPWKRLYIQRDGEDMTELVRDCSSEFKEYYIQMQAAKRSQAPLLSQ 180
           CLRWGLLTTKKLRQCPWKRLYIQRDGEDMTELVRDCSSEFKEYYIQMQAAKRSQAPLLSQ
Sbjct: 121 CLRWGLLTTKKLRQCPWKRLYIQRDGEDMTELVRDCSSEFKEYYIQMQAAKRSQAPLLSQ 180

Query: 181 VQDDQIILDRTVADQVSTWKSSRGLTDKIVVDHTCSGETCSYYQIGDAFVCEKTGLVHVC 240
           VQDDQIILDRTVADQVSTWKSSRGLTDKIVVDHTCSGETCSYYQIGDAFVCEKTGLVHVC
Sbjct: 181 VQDDQIILDRTVADQVSTWKSSRGLTDKIVVDHTCSGETCSYYQIGDAFVCEKTGLVHVC 240

Query: 241 DDTCREVIMDLNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQGGVTDEAEPFMGLGRFAR 300
           DDTCREVIMDLNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQGGVTDEAEPFMGLGRFAR
Sbjct: 241 DDTCREVIMDLNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQGGVTDEAEPFMGLGRFAR 300

Query: 301 AYLLGYNCADEAELEATLRFC 321
           AYLLGYNCADEAELEATLRFC
Sbjct: 301 AYLLGYNCADEAELEATLRFC 321

[Close]

BLAST of MC11g0726 vs. NCBI nr
Match: XP_038896910.1 (F-box protein SKIP31 isoform X1 [Benincasa hispida])

HSP 1 Score: 593 bits (1529), Expect = 6.35e-213
Identity = 297/322 (92.24%), Postives = 306/322 (95.03%), Query Frame = 0


Query: 1   MAIPDDEDEFLAQFLESEVLSEVSDKEEVNAEEEPKPKRVRIEHSSPSVEREVASVTTSS 60
           MAIPD+EDEFLAQFLESEVLSEVSDKEE NA+EEPK KR RIE  SP+ +REV SVT SS
Sbjct: 1   MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKAKRARIEQISPNEQREVVSVTNSS 60

Query: 61  SQSNGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQS GVVPGRIETGIFSKIPPELFRHILKFLSSEDL+SCSLVCRFLNSVASDESLW RLY
Sbjct: 61  SQSKGVVPGRIETGIFSKIPPELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWHRLY 120

Query: 121 CLRWGLL-TTKKLRQCPWKRLYIQRDGEDMTELVRDCSSEFKEYYIQMQAAKRSQAPLLS 180
           CLRWGLL TTKKLRQCPWK+LYIQRD EDMT+LVRDCSSEFKEYYIQMQAAKRSQAPL S
Sbjct: 121 CLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVVDHTCSGETCSYYQIGDAFVCEKTGLVHV 240
           QVQDDQIILDRTVADQVSTWKSSRGLTDKIV+DHTCSGETC+YYQIGDAFVCEKTGLVHV
Sbjct: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHV 240

Query: 241 CDDTCREVIMDLNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQGGVTDEAEPFMGLGRFA 300
           CDDTCREVIMD NDEQLVCRISGHCFDTLLLPDSMEPDTEQQQGGVTDEAEPFMG GRFA
Sbjct: 241 CDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQGGVTDEAEPFMGSGRFA 300

Query: 301 RAYLLGYNCADEAELEATLRFC 321
           RAYLLGYNC DEAELEATLRFC
Sbjct: 301 RAYLLGYNCVDEAELEATLRFC 322

[Close]

BLAST of MC11g0726 vs. NCBI nr
Match: XP_038896911.1 (F-box protein SKIP31 isoform X2 [Benincasa hispida])

HSP 1 Score: 584 bits (1506), Expect = 1.89e-209
Identity = 295/322 (91.61%), Postives = 304/322 (94.41%), Query Frame = 0


Query: 1   MAIPDDEDEFLAQFLESEVLSEVSDKEEVNAEEEPKPKRVRIEHSSPSVEREVASVTTSS 60
           MAIPD+EDEFLAQFLESEVLSEVSDKEE NA+EEPK KR RIE  SP+ +REV SVT SS
Sbjct: 1   MAIPDEEDEFLAQFLESEVLSEVSDKEEGNAQEEPKAKRARIEQISPNEQREVVSVTNSS 60

Query: 61  SQSNGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQS GVVPGRIETGIFSKIPPELFRHILKFLSSEDL+SCSLVCRFLNSVASDESLW RLY
Sbjct: 61  SQSKGVVPGRIETGIFSKIPPELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWHRLY 120

Query: 121 CLRWGLL-TTKKLRQCPWKRLYIQRDGEDMTELVRDCSSEFKEYYIQMQAAKRSQAPLLS 180
           CLRWGLL TTKKLRQCPWK+LYIQRD EDMT+LVRDCSSEFKEYYIQMQAAKRSQAPL S
Sbjct: 121 CLRWGLLPTTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVVDHTCSGETCSYYQIGDAFVCEKTGLVHV 240
           QVQDDQIILDRTVADQVSTWKSSRGLTDKIV+DHTCSGETC+YYQIGDAFVCEKTGLVHV
Sbjct: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQIGDAFVCEKTGLVHV 240

Query: 241 CDDTCREVIMDLNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQGGVTDEAEPFMGLGRFA 300
           CDDTCREVIMD NDEQLVCRISGHCFDTLLLPDSMEPDT  QQGGVTDEAEPFMG GRFA
Sbjct: 241 CDDTCREVIMDPNDEQLVCRISGHCFDTLLLPDSMEPDT--QQGGVTDEAEPFMGSGRFA 300

Query: 301 RAYLLGYNCADEAELEATLRFC 321
           RAYLLGYNC DEAELEATLRFC
Sbjct: 301 RAYLLGYNCVDEAELEATLRFC 320

[Close]

BLAST of MC11g0726 vs. NCBI nr
Match: XP_011653768.1 (F-box protein SKIP31 isoform X1 [Cucumis sativus] >XP_031740683.1 F-box protein SKIP31 isoform X1 [Cucumis sativus] >KAE8649612.1 hypothetical protein Csa_012274 [Cucumis sativus])

HSP 1 Score: 581 bits (1498), Expect = 3.36e-208
Identity = 290/322 (90.06%), Postives = 304/322 (94.41%), Query Frame = 0


Query: 1   MAIPDDEDEFLAQFLESEVLSEVSDKEEVNAEEEPKPKRVRIEHSSPSVEREVASVTTSS 60
           MAIPD++DEFLAQFLESEVLSEVSDKEE N +EEPKPKR RIE  SP+ +REV SVT+SS
Sbjct: 1   MAIPDEDDEFLAQFLESEVLSEVSDKEEGNVQEEPKPKRARIEQISPNEQREVVSVTSSS 60

Query: 61  SQSNGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQS GVVPGRIE+GIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNS ASDESLWRRLY
Sbjct: 61  SQSKGVVPGRIESGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSAASDESLWRRLY 120

Query: 121 CLRWGLLT-TKKLRQCPWKRLYIQRDGEDMTELVRDCSSEFKEYYIQMQAAKRSQAPLLS 180
           CLRWG+L  TKKLRQCPWK+LYIQRD EDMT+LVRDCSSEFKEYYIQMQAAKRSQAPL S
Sbjct: 121 CLRWGMLPRTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVVDHTCSGETCSYYQIGDAFVCEKTGLVHV 240
           QVQDDQIILDRT+ADQVSTWKSSRGLTDKIV+DHTCSGETC+YYQIGDAFVCEKTGLVHV
Sbjct: 181 QVQDDQIILDRTMADQVSTWKSSRGLTDKIVLDHTCSGETCTYYQIGDAFVCEKTGLVHV 240

Query: 241 CDDTCREVIMDLNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQGGVTDEAEPFMGLGRFA 300
           CDDTCREVIMD NDEQLVC ISGHCFDTLLLPD+MEPDTEQQQ G TDEAEPFMG GRFA
Sbjct: 241 CDDTCREVIMDPNDEQLVCTISGHCFDTLLLPDAMEPDTEQQQAGGTDEAEPFMGSGRFA 300

Query: 301 RAYLLGYNCADEAELEATLRFC 321
           RAYLLGYNCADEAELEATLRFC
Sbjct: 301 RAYLLGYNCADEAELEATLRFC 322

[Close]

BLAST of MC11g0726 vs. NCBI nr
Match: XP_008444220.1 (PREDICTED: F-box protein SKIP31 isoform X1 [Cucumis melo])

HSP 1 Score: 580 bits (1496), Expect = 6.78e-208
Identity = 289/322 (89.75%), Postives = 305/322 (94.72%), Query Frame = 0


Query: 1   MAIPDDEDEFLAQFLESEVLSEVSDKEEVNAEEEPKPKRVRIEHSSPSVEREVASVTTSS 60
           MAIPD++DEFLAQFLESEVLSEVSDKEE N +EEPKPKR RIE  SP+ +REV SVT+SS
Sbjct: 1   MAIPDEDDEFLAQFLESEVLSEVSDKEEGNVQEEPKPKRARIEQISPNEQREVVSVTSSS 60

Query: 61  SQSNGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQS GVVPGRIE+GIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNS ASDESLWRRLY
Sbjct: 61  SQSKGVVPGRIESGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSAASDESLWRRLY 120

Query: 121 CLRWGLL-TTKKLRQCPWKRLYIQRDGEDMTELVRDCSSEFKEYYIQMQAAKRSQAPLLS 180
           CLRWG+L T+KKLRQCPWK+LYIQRD EDMT+LVRDCSSEFKEYYIQMQAAKRSQAPL S
Sbjct: 121 CLRWGMLPTSKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVVDHTCSGETCSYYQIGDAFVCEKTGLVHV 240
           QVQDDQIILDRT+ADQVSTWKSSRGLTDKIV+DHTCSGETC+YYQIGDAFVCEKTGLVHV
Sbjct: 181 QVQDDQIILDRTMADQVSTWKSSRGLTDKIVLDHTCSGETCTYYQIGDAFVCEKTGLVHV 240

Query: 241 CDDTCREVIMDLNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQGGVTDEAEPFMGLGRFA 300
           CDDTCREVIMD NDEQLVC ISGHCFD+LLLPD+MEPDTEQQQ G TDEAEPFMG GRFA
Sbjct: 241 CDDTCREVIMDPNDEQLVCTISGHCFDSLLLPDAMEPDTEQQQAGGTDEAEPFMGSGRFA 300

Query: 301 RAYLLGYNCADEAELEATLRFC 321
           RAYLLGYNCADEAELEATLRFC
Sbjct: 301 RAYLLGYNCADEAELEATLRFC 322

[Close]

BLAST of MC11g0726 vs. ExPASy TrEMBL
Match: A0A6J1CF80 (F-box protein SKIP31 OS=Momordica charantia OX=3673 GN=LOC111010971 PE=4 SV=1)

HSP 1 Score: 642 bits (1656), Expect = 1.30e-232
Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0


Query: 1   MAIPDDEDEFLAQFLESEVLSEVSDKEEVNAEEEPKPKRVRIEHSSPSVEREVASVTTSS 60
           MAIPDDEDEFLAQFLESEVLSEVSDKEEVNAEEEPKPKRVRIEHSSPSVEREVASVTTSS
Sbjct: 1   MAIPDDEDEFLAQFLESEVLSEVSDKEEVNAEEEPKPKRVRIEHSSPSVEREVASVTTSS 60

Query: 61  SQSNGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQSNGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY
Sbjct: 61  SQSNGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120

Query: 121 CLRWGLLTTKKLRQCPWKRLYIQRDGEDMTELVRDCSSEFKEYYIQMQAAKRSQAPLLSQ 180
           CLRWGLLTTKKLRQCPWKRLYIQRDGEDMTELVRDCSSEFKEYYIQMQAAKRSQAPLLSQ
Sbjct: 121 CLRWGLLTTKKLRQCPWKRLYIQRDGEDMTELVRDCSSEFKEYYIQMQAAKRSQAPLLSQ 180

Query: 181 VQDDQIILDRTVADQVSTWKSSRGLTDKIVVDHTCSGETCSYYQIGDAFVCEKTGLVHVC 240
           VQDDQIILDRTVADQVSTWKSSRGLTDKIVVDHTCSGETCSYYQIGDAFVCEKTGLVHVC
Sbjct: 181 VQDDQIILDRTVADQVSTWKSSRGLTDKIVVDHTCSGETCSYYQIGDAFVCEKTGLVHVC 240

Query: 241 DDTCREVIMDLNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQGGVTDEAEPFMGLGRFAR 300
           DDTCREVIMDLNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQGGVTDEAEPFMGLGRFAR
Sbjct: 241 DDTCREVIMDLNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQGGVTDEAEPFMGLGRFAR 300

Query: 301 AYLLGYNCADEAELEATLRFC 321
           AYLLGYNCADEAELEATLRFC
Sbjct: 301 AYLLGYNCADEAELEATLRFC 321

[Close]

BLAST of MC11g0726 vs. ExPASy TrEMBL
Match: A0A1S3B9V0 (F-box protein SKIP31 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487620 PE=4 SV=1)

HSP 1 Score: 580 bits (1496), Expect = 3.28e-208
Identity = 289/322 (89.75%), Postives = 305/322 (94.72%), Query Frame = 0


Query: 1   MAIPDDEDEFLAQFLESEVLSEVSDKEEVNAEEEPKPKRVRIEHSSPSVEREVASVTTSS 60
           MAIPD++DEFLAQFLESEVLSEVSDKEE N +EEPKPKR RIE  SP+ +REV SVT+SS
Sbjct: 1   MAIPDEDDEFLAQFLESEVLSEVSDKEEGNVQEEPKPKRARIEQISPNEQREVVSVTSSS 60

Query: 61  SQSNGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQS GVVPGRIE+GIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNS ASDESLWRRLY
Sbjct: 61  SQSKGVVPGRIESGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSAASDESLWRRLY 120

Query: 121 CLRWGLL-TTKKLRQCPWKRLYIQRDGEDMTELVRDCSSEFKEYYIQMQAAKRSQAPLLS 180
           CLRWG+L T+KKLRQCPWK+LYIQRD EDMT+LVRDCSSEFKEYYIQMQAAKRSQAPL S
Sbjct: 121 CLRWGMLPTSKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVVDHTCSGETCSYYQIGDAFVCEKTGLVHV 240
           QVQDDQIILDRT+ADQVSTWKSSRGLTDKIV+DHTCSGETC+YYQIGDAFVCEKTGLVHV
Sbjct: 181 QVQDDQIILDRTMADQVSTWKSSRGLTDKIVLDHTCSGETCTYYQIGDAFVCEKTGLVHV 240

Query: 241 CDDTCREVIMDLNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQGGVTDEAEPFMGLGRFA 300
           CDDTCREVIMD NDEQLVC ISGHCFD+LLLPD+MEPDTEQQQ G TDEAEPFMG GRFA
Sbjct: 241 CDDTCREVIMDPNDEQLVCTISGHCFDSLLLPDAMEPDTEQQQAGGTDEAEPFMGSGRFA 300

Query: 301 RAYLLGYNCADEAELEATLRFC 321
           RAYLLGYNCADEAELEATLRFC
Sbjct: 301 RAYLLGYNCADEAELEATLRFC 322

[Close]

BLAST of MC11g0726 vs. ExPASy TrEMBL
Match: A0A1S3B9Y3 (F-box protein SKIP31 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487620 PE=4 SV=1)

HSP 1 Score: 572 bits (1475), Expect = 4.83e-205
Identity = 287/322 (89.13%), Postives = 303/322 (94.10%), Query Frame = 0


Query: 1   MAIPDDEDEFLAQFLESEVLSEVSDKEEVNAEEEPKPKRVRIEHSSPSVEREVASVTTSS 60
           MAIPD++DEFLAQFLESEVLSEVSDKEE N +EEPKPKR RIE  SP+ +REV SVT+SS
Sbjct: 1   MAIPDEDDEFLAQFLESEVLSEVSDKEEGNVQEEPKPKRARIEQISPNEQREVVSVTSSS 60

Query: 61  SQSNGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQS GVVPGRIE+GIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNS ASDESLWRRLY
Sbjct: 61  SQSKGVVPGRIESGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSAASDESLWRRLY 120

Query: 121 CLRWGLL-TTKKLRQCPWKRLYIQRDGEDMTELVRDCSSEFKEYYIQMQAAKRSQAPLLS 180
           CLRWG+L T+KKLRQCPWK+LYIQRD EDMT+LVRDCSSEFKEYYIQMQAAKRSQAPL S
Sbjct: 121 CLRWGMLPTSKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVVDHTCSGETCSYYQIGDAFVCEKTGLVHV 240
           Q  DDQIILDRT+ADQVSTWKSSRGLTDKIV+DHTCSGETC+YYQIGDAFVCEKTGLVHV
Sbjct: 181 Q--DDQIILDRTMADQVSTWKSSRGLTDKIVLDHTCSGETCTYYQIGDAFVCEKTGLVHV 240

Query: 241 CDDTCREVIMDLNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQGGVTDEAEPFMGLGRFA 300
           CDDTCREVIMD NDEQLVC ISGHCFD+LLLPD+MEPDTEQQQ G TDEAEPFMG GRFA
Sbjct: 241 CDDTCREVIMDPNDEQLVCTISGHCFDSLLLPDAMEPDTEQQQAGGTDEAEPFMGSGRFA 300

Query: 301 RAYLLGYNCADEAELEATLRFC 321
           RAYLLGYNCADEAELEATLRFC
Sbjct: 301 RAYLLGYNCADEAELEATLRFC 320

[Close]

BLAST of MC11g0726 vs. ExPASy TrEMBL
Match: A0A6J1FLL4 (F-box protein SKIP31-like OS=Cucurbita moschata OX=3662 GN=LOC111446341 PE=4 SV=1)

HSP 1 Score: 572 bits (1474), Expect = 8.57e-205
Identity = 288/326 (88.34%), Postives = 305/326 (93.56%), Query Frame = 0


Query: 1   MAIPDDEDEFLAQFLESEVLSEVSDKEEVNAEEEPKPKRVRIEHSSPSVEREVASVTTSS 60
           M+IPD+EDEFLAQF+ESEVLSEVSDKEE N EEEPKPKR RIE  +P+ +REVASVTTSS
Sbjct: 1   MSIPDEEDEFLAQFIESEVLSEVSDKEEGNREEEPKPKRARIEQINPNEQREVASVTTSS 60

Query: 61  SQSN--GVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRR 120
           SQS   GVVPGRIETGIFSK+PPELFRHILKFLSSEDL+SCSLVCRFLNSVASDESLWRR
Sbjct: 61  SQSQSKGVVPGRIETGIFSKVPPELFRHILKFLSSEDLVSCSLVCRFLNSVASDESLWRR 120

Query: 121 LYCLRWGLL-TTKKLRQCPWKRLYIQRDGEDMTELVRDCSSEFKEYYIQMQAAKRSQAPL 180
           LYCLRWGL+  TKKLRQCPWK+LYIQRDGEDMT+LVRDCSSEFKEYYIQMQAAKRSQAPL
Sbjct: 121 LYCLRWGLMPVTKKLRQCPWKKLYIQRDGEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPL 180

Query: 181 LSQVQDDQIILDRTVADQVSTWKSSRGLTDKIVVDHTCSGETCSYYQIGDAFVCEKTGLV 240
            SQVQDDQIILDRTVADQVS+WKSS+GL DKIV+DHTCSGETC+YYQIGDAFVCEKTGLV
Sbjct: 181 PSQVQDDQIILDRTVADQVSSWKSSKGLADKIVIDHTCSGETCTYYQIGDAFVCEKTGLV 240

Query: 241 HVCDDTCREVIMDLNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQGGVTDEAE--PFMGL 300
           HVCDDTCREVIMD +DEQLVCRISGHCFD LLLPDS EPD+EQQ  GVTDEAE  PFMG 
Sbjct: 241 HVCDDTCREVIMDPDDEQLVCRISGHCFDNLLLPDSTEPDSEQQLAGVTDEAEAEPFMGS 300

Query: 301 GRFARAYLLGYNCADEAELEATLRFC 321
           GRFARAYLLGYNCADEAELEATLRFC
Sbjct: 301 GRFARAYLLGYNCADEAELEATLRFC 326

[Close]

BLAST of MC11g0726 vs. ExPASy TrEMBL
Match: A0A6J1F8E8 (F-box protein SKIP31-like OS=Cucurbita moschata OX=3662 GN=LOC111443086 PE=4 SV=1)

HSP 1 Score: 571 bits (1471), Expect = 2.28e-204
Identity = 287/324 (88.58%), Postives = 304/324 (93.83%), Query Frame = 0


Query: 1   MAIPDDEDEFLAQFLESEVLSEVSDKEEVNAEEEPKPKRVRIEHSSPSVEREVASVTTSS 60
           MAI D+EDE LAQFLE+EVLSEVSDKEE NA+EEP+PKR RIE  +P+ +REVASVTTSS
Sbjct: 1   MAISDEEDELLAQFLETEVLSEVSDKEEGNAQEEPQPKRARIEQINPNEQREVASVTTSS 60

Query: 61  SQSNGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120
           SQ +GVVPGRI+TGIFS+IP ELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY
Sbjct: 61  SQFSGVVPGRIDTGIFSQIPSELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLY 120

Query: 121 CLRWGLLT-TKKLRQCPWKRLYIQRDGEDMTELVRDCSSEFKEYYIQMQAAKRSQAPLLS 180
           CLRWGL+  TKKLRQCPWK+LYIQRD EDMT+LVRDCSSEFKEYYIQMQAAKRSQAPL S
Sbjct: 121 CLRWGLVPKTKKLRQCPWKKLYIQRDEEDMTQLVRDCSSEFKEYYIQMQAAKRSQAPLPS 180

Query: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVVDHTCSGETCSYYQIGDAFVCEKTGLVHV 240
           QVQDDQIILDRTVADQVSTWKSSRGLTDKIV+DHTCSGETC+YYQ+GDAFVCEKTGLVHV
Sbjct: 181 QVQDDQIILDRTVADQVSTWKSSRGLTDKIVIDHTCSGETCTYYQVGDAFVCEKTGLVHV 240

Query: 241 CDDTCREVIMDLNDEQLVCRISGHCFDTLLLPDSMEPDTEQQQGGVTDEAE--PFMGLGR 300
           CDDTCREV+MD NDEQLVCRISGHCFDTLL PDSMEPDTE QQ GVTDEAE  PFMG GR
Sbjct: 241 CDDTCREVVMDPNDEQLVCRISGHCFDTLLFPDSMEPDTELQQAGVTDEAEREPFMGSGR 300

Query: 301 FARAYLLGYNCADEAELEATLRFC 321
           FARAYLLGYNCADEAELEATLRFC
Sbjct: 301 FARAYLLGYNCADEAELEATLRFC 324

[Close]

BLAST of MC11g0726 vs. TAIR 10
Match: AT5G45360.1 (F-box family protein )

HSP 1 Score: 350.5 bits (898), Expect = 1.4e-96
Identity = 187/324 (57.72%), Postives = 230/324 (70.99%), Query Frame = 0


Query: 1   MAIPDDEDEFLAQFLESEVLSEVSDKEEVNAEEEPKPKRVRIEH-SSPSVEREVASVTTS 60
           M++ D+EDE  A+FLESEV S V DKEE    +EP+ KR RIE   + ++E++       
Sbjct: 1   MSVSDEEDECFARFLESEV-SSVEDKEET---KEPEAKRQRIEKGETKALEKDEDQKENG 60

Query: 61  SSQSNGVVPGRIETGIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRL 120
           +         RIE+G+F+ +P ELFRHILKFLSSEDL+SCSLVC+FLN  A+DESLWRRL
Sbjct: 61  NKDKTDA--KRIESGVFTNVPTELFRHILKFLSSEDLVSCSLVCKFLNFAAADESLWRRL 120

Query: 121 YCLRWGL-LTTKKLRQCPWKRLYIQRDGEDMTELVRDCSSEFKEYYIQMQAAKRSQAPLL 180
           YC+RWGL L ++KLR+  WK+LYI RD +DM ELVR C S+FKEYY+ MQAAKRSQAPL 
Sbjct: 121 YCIRWGLTLPSRKLRESAWKKLYIDRDEQDMIELVRTCPSDFKEYYVHMQAAKRSQAPLP 180

Query: 181 SQVQDDQIILDRTVADQVSTWKSSRGLTDKIVVDHTCSGETCSYYQIGDAFVCEKTGLVH 240
           SQ+ DD+IILD TV +QVS WK S+GLTDK V  H C G  CSY+QI D F+C++TG VH
Sbjct: 181 SQMVDDRIILDNTVLEQVSLWKKSKGLTDKAVTGHICLGTKCSYHQIDDVFICKETGNVH 240

Query: 241 VCDDTCREVIMDLNDEQLVCRISGHCFDTLLLPDSMEPDTEQ-QQGGVTDEAEPFMGLGR 300
           VCDD C+EVI+    + +VC ISG C DTLL+    EPD +   +     EAE F    R
Sbjct: 241 VCDDNCKEVILSPEGDLMVCTISGVCSDTLLV--QTEPDADGCYEEEAELEAEVFTDKSR 300

Query: 301 FARAYLLGYNCADEAELEATLRFC 322
            ARA+ LGYNC DE ELE TLRFC
Sbjct: 301 LARAFELGYNCDDEQELERTLRFC 316

[Close]

BLAST of MC11g0726 vs. TAIR 10
Match: AT5G57360.1 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 42.4 bits (98), Expect = 8.2e-04
Identity = 29/80 (36.25%), Postives = 39/80 (48.75%), Query Frame = 0


Query: 74  GIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLYCLRWGLLTTKKLR 133
           G+F      +   IL  L+  D+ S S VCR L  +  +E LWRR+    WG  TT+ L 
Sbjct: 196 GLFQLSDEVVSMKILSRLTPRDVASVSSVCRRLYVLTKNEDLWRRVCQNAWGSETTRVLE 255

Query: 134 QCPW-KRLYIQRDGEDMTEL 153
             P  KRL   R   ++T L
Sbjct: 256 TVPGAKRLGWGRLARELTTL 275

[Close]

BLAST of MC11g0726 vs. TAIR 10
Match: AT5G57360.2 (Galactose oxidase/kelch repeat superfamily protein )

HSP 1 Score: 42.4 bits (98), Expect = 8.2e-04
Identity = 29/80 (36.25%), Postives = 39/80 (48.75%), Query Frame = 0


Query: 74  GIFSKIPPELFRHILKFLSSEDLISCSLVCRFLNSVASDESLWRRLYCLRWGLLTTKKLR 133
           G+F      +   IL  L+  D+ S S VCR L  +  +E LWRR+    WG  TT+ L 
Sbjct: 196 GLFQLSDEVVSMKILSRLTPRDVASVSSVCRRLYVLTKNEDLWRRVCQNAWGSETTRVLE 255

Query: 134 QCPW-KRLYIQRDGEDMTEL 153
             P  KRL   R   ++T L
Sbjct: 256 TVPGAKRLGWGRLARELTTL 275

The following BLAST results are available for this feature:

BLAST of MC11g0726 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHK0	2.0e-95	57.72	F-box protein SKIP31 OS=Arabidopsis thaliana OX=3702 GN=SKIP31 PE=1 SV=1	[more]

BLAST of MC11g0726 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022140264.1	2.68e-232	100.00	F-box protein SKIP31 [Momordica charantia]	[more]
XP_038896910.1	6.35e-213	92.24	F-box protein SKIP31 isoform X1 [Benincasa hispida]	[more]
XP_038896911.1	1.89e-209	91.61	F-box protein SKIP31 isoform X2 [Benincasa hispida]	[more]
XP_011653768.1	3.36e-208	90.06	F-box protein SKIP31 isoform X1 [Cucumis sativus] >XP_031740683.1 F-box protein ...	[more]
XP_008444220.1	6.78e-208	89.75	PREDICTED: F-box protein SKIP31 isoform X1 [Cucumis melo]	[more]

BLAST of MC11g0726 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CF80	1.30e-232	100.00	F-box protein SKIP31 OS=Momordica charantia OX=3673 GN=LOC111010971 PE=4 SV=1	[more]
A0A1S3B9V0	3.28e-208	89.75	F-box protein SKIP31 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487620 PE=4 SV=...	[more]
A0A1S3B9Y3	4.83e-205	89.13	F-box protein SKIP31 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487620 PE=4 SV=...	[more]
A0A6J1FLL4	8.57e-205	88.34	F-box protein SKIP31-like OS=Cucurbita moschata OX=3662 GN=LOC111446341 PE=4 SV=...	[more]
A0A6J1F8E8	2.28e-204	88.58	F-box protein SKIP31-like OS=Cucurbita moschata OX=3662 GN=LOC111443086 PE=4 SV=...	[more]

BLAST of MC11g0726 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45360.1	1.4e-96	57.72	F-box family protein	[more]
AT5G57360.1	8.2e-04	36.25	Galactose oxidase/kelch repeat superfamily protein	[more]
AT5G57360.2	8.2e-04	36.25	Galactose oxidase/kelch repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	SMART	SM00256	fbox_2	coord: 79..119 e-value: 1.6E-7 score: 41.0
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 77..121 e-value: 3.3E-12 score: 46.1
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 73..119 score: 14.610888
None	No IPR available	GENE3D	1.20.1280.50		coord: 64..149 e-value: 2.8E-16 score: 61.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..48
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..65
None	No IPR available	PANTHER	PTHR46550	F-BOX ONLY PROTEIN 3	coord: 66..264 coord: 265..321
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 62..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g0726.1	MC11g0726.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0042981	regulation of apoptotic process
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
molecular_function	GO:0005515	protein binding