MC11g0682 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0682
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	protein MEI2-like 6
Location	MC11: 5461795 .. 5462974 (-)
RNA-Seq Expression	MC11g0682
Synteny	MC11g0682

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCGCTCCTCTAAACCCTAACGCTAACCCTTTTCATTATACGACGCCGTTCCACCCCAACCCACAATTCGTCCCCCTCTTCAAAGCCTTCCCTGTAGCAGCTCCGTCGCGGGCCCTTCTCTGGGGCCCAACCCATGGATACGCCTCTTACGTCGACCACCCCATGCTGCCCTTCTACGACGTCGTTCCGCTTCCTCCGCCGTGGCCCTCTTCCGCTGCGAATTCCGTCGTCGGAGTAGTCGGTCAGAGGAATTCCGGCAGAAAATGCAAGATCGGAAATTGGGTTCCGCCGGTCGTCACGGGTGATGCCGAAATCCTCCCCTCAGAAACCACCACCATAATGATTAAAAATATACCCAATCAATTGAGGTCTCTATTTATCAACTTCTATCATAGGATTTCATCTTCTTTTTTTTTTGTTTGTTTTTGTTTTTATAATTTTGATGAATTAATGTCTTCGAAACAGCATTTTTTTTCTTTTATTAATGTTTTGTATTGTTTGAATAGGCGACACCATCTTCTGAACATTTTAGACGAGCACTGCAAGTCGAAGAATGGAGCTTCTGACCGGGGCAGCCAAACCCAAAGGTCGTCGTACGACTTTGTGTACTTGCCCATGGACTTCCGGTCTGTAGTACTTGTCAGTATAATTACTGTAATAACCCTCGTGGATTTTGGTTTTGCATGTACTAAAAAGTAAAATTTGTATTCTATTCTTTCCATATATAGAAAGTATTGGTACAATGGGAAGATTTCAAATTTGGGGTACGCGTTTGTAAATTTCACGACCGCCGCCGCAGCCTCCGAGTTCTGTAAAGCCTATCACCGCCGCCACTGGGAGGTTCTACTCAACAATAAAGTCTGCGAAATAAGACGCGCCAAACTTCAGGTCCACTCCCAAACGTCGCCGTTTCATTTATTTTGTCAATTTAATTAAGATTAATGTTTGTTTTTTTTATAAACGGTGTCGTCTGGTTGATTTATTGCATGTTATATATTGTTATGTTCAGGGGCTTAAGGCTCTCATGGAAGCATTCAGGAACAAGATATTTTGGTGCCACGCCAATAACTATCTTCCGGCAGTGCTGGAGCCGCCGAGCGACGGTTGCCGGAGCTACAGAGCCACCCCCGTCGGTAGACGAATCAGTCGCCCGCCACCGAATCGGATGAAGAAGTGTGGC

mRNA sequence

ACCGCTCCTCTAAACCCTAACGCTAACCCTTTTCATTATACGACGCCGTTCCACCCCAACCCACAATTCGTCCCCCTCTTCAAAGCCTTCCCTGTAGCAGCTCCGTCGCGGGCCCTTCTCTGGGGCCCAACCCATGGATACGCCTCTTACGTCGACCACCCCATGCTGCCCTTCTACGACGTCGTTCCGCTTCCTCCGCCGTGGCCCTCTTCCGCTGCGAATTCCGTCGTCGGAGTAGTCGGTCAGAGGAATTCCGGCAGAAAATGCAAGATCGGAAATTGGGTTCCGCCGGTCGTCACGGGTGATGCCGAAATCCTCCCCTCAGAAACCACCACCATAATGATTAAAAATATACCCAATCAATTGAGGCGACACCATCTTCTGAACATTTTAGACGAGCACTGCAAGTCGAAGAATGGAGCTTCTGACCGGGGCAGCCAAACCCAAAGGTCGTCGTACGACTTTGTGTACTTGCCCATGGACTTCCGAAAGTATTGGTACAATGGGAAGATTTCAAATTTGGGGTACGCGTTTGTAAATTTCACGACCGCCGCCGCAGCCTCCGAGTTCTGTAAAGCCTATCACCGCCGCCACTGGGAGGTTCTACTCAACAATAAAGTCTGCGAAATAAGACGCGCCAAACTTCAGGGGCTTAAGGCTCTCATGGAAGCATTCAGGAACAAGATATTTTGGTGCCACGCCAATAACTATCTTCCGGCAGTGCTGGAGCCGCCGAGCGACGGTTGCCGGAGCTACAGAGCCACCCCCGTCGGTAGACGAATCAGTCGCCCGCCACCGAATCGGATGAAGAAGTGTGGC

Coding sequence (CDS)

ACCGCTCCTCTAAACCCTAACGCTAACCCTTTTCATTATACGACGCCGTTCCACCCCAACCCACAATTCGTCCCCCTCTTCAAAGCCTTCCCTGTAGCAGCTCCGTCGCGGGCCCTTCTCTGGGGCCCAACCCATGGATACGCCTCTTACGTCGACCACCCCATGCTGCCCTTCTACGACGTCGTTCCGCTTCCTCCGCCGTGGCCCTCTTCCGCTGCGAATTCCGTCGTCGGAGTAGTCGGTCAGAGGAATTCCGGCAGAAAATGCAAGATCGGAAATTGGGTTCCGCCGGTCGTCACGGGTGATGCCGAAATCCTCCCCTCAGAAACCACCACCATAATGATTAAAAATATACCCAATCAATTGAGGCGACACCATCTTCTGAACATTTTAGACGAGCACTGCAAGTCGAAGAATGGAGCTTCTGACCGGGGCAGCCAAACCCAAAGGTCGTCGTACGACTTTGTGTACTTGCCCATGGACTTCCGAAAGTATTGGTACAATGGGAAGATTTCAAATTTGGGGTACGCGTTTGTAAATTTCACGACCGCCGCCGCAGCCTCCGAGTTCTGTAAAGCCTATCACCGCCGCCACTGGGAGGTTCTACTCAACAATAAAGTCTGCGAAATAAGACGCGCCAAACTTCAGGGGCTTAAGGCTCTCATGGAAGCATTCAGGAACAAGATATTTTGGTGCCACGCCAATAACTATCTTCCGGCAGTGCTGGAGCCGCCGAGCGACGGTTGCCGGAGCTACAGAGCCACCCCCGTCGGTAGACGAATCAGTCGCCCGCCACCGAATCGGATGAAGAAGTGTGGC

Protein sequence

TAPLNPNANPFHYTTPFHPNPQFVPLFKAFPVAAPSRALLWGPTHGYASYVDHPMLPFYDVVPLPPPWPSSAANSVVGVVGQRNSGRKCKIGNWVPPVVTGDAEILPSETTTIMIKNIPNQLRRHHLLNILDEHCKSKNGASDRGSQTQRSSYDFVYLPMDFRKYWYNGKISNLGYAFVNFTTAAAASEFCKAYHRRHWEVLLNNKVCEIRRAKLQGLKALMEAFRNKIFWCHANNYLPAVLEPPSDGCRSYRATPVGRRISRPPPNRMKKCG

Homology

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BLAST of MC11g0682 vs. ExPASy Swiss-Prot
Match: A2WY46 (Protein terminal ear1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=PLA2 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.8e-28
Identity = 67/157 (42.68%), Postives = 92/157 (58.60%), Query Frame = 0


Query: 111 TTIMIKNIPNQLRRHHLLNILDEHCKSKNGASDRGSQTQR---SSYDFVYLPMDFRKYWY 170
           TT+MI+NIPN+  +  LLN+LD HC   N   +   + +    SSYDF+YLP+DF     
Sbjct: 455 TTVMIRNIPNKYSQKLLLNMLDNHCILSNQQIEASCEDEAQPFSSYDFLYLPIDF----- 514

Query: 171 NGKISNLGYAFVNFTTAAAASEFCKAYHRRHWEVLLNNKVCEIRRAKLQGLKALMEAFRN 230
           N K  N+GY FVN T+  AA    KA+H++ WEV  + K+C++  A++QGL AL E F+N
Sbjct: 515 NNK-CNVGYGFVNLTSPEAAVRLYKAFHKQPWEVFNSRKICQVTYARVQGLDALKEHFKN 574

Query: 231 KIFWCHANNYLPAVLEPPSDGCRSYRATPVGRRISRP 265
             F C ++ YLP V  PP DG       P+  R   P
Sbjct: 575 SKFPCDSDEYLPVVFSPPRDGKLLTEPVPLVGRSPAP 605

[Close]

BLAST of MC11g0682 vs. ExPASy Swiss-Prot
Match: Q0JGS5 (Protein terminal ear1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=PLA2 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 6.8e-28
Identity = 67/157 (42.68%), Postives = 92/157 (58.60%), Query Frame = 0


Query: 111 TTIMIKNIPNQLRRHHLLNILDEHCKSKNGASDRGSQTQR---SSYDFVYLPMDFRKYWY 170
           TT+MI+NIPN+  +  LLN+LD HC   N   +   + +    SSYDF+YLP+DF     
Sbjct: 458 TTVMIRNIPNKYSQKLLLNMLDNHCILSNQQIEASCEDEAQPFSSYDFLYLPIDF----- 517

Query: 171 NGKISNLGYAFVNFTTAAAASEFCKAYHRRHWEVLLNNKVCEIRRAKLQGLKALMEAFRN 230
           N K  N+GY FVN T+  AA    KA+H++ WEV  + K+C++  A++QGL AL E F+N
Sbjct: 518 NNK-CNVGYGFVNLTSPEAAVRLYKAFHKQPWEVFNSRKICQVTYARVQGLDALKEHFKN 577

Query: 231 KIFWCHANNYLPAVLEPPSDGCRSYRATPVGRRISRP 265
             F C ++ YLP V  PP DG       P+  R   P
Sbjct: 578 SKFPCDSDEYLPVVFSPPRDGKLLTEPVPLVGRSPAP 608

[Close]

BLAST of MC11g0682 vs. ExPASy Swiss-Prot
Match: O65001 (Protein terminal ear1 OS=Zea mays OX=4577 GN=TE1 PE=2 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 9.8e-27
Identity = 70/165 (42.42%), Postives = 95/165 (57.58%), Query Frame = 0


Query: 111 TTIMIKNIPNQLRRHHLLNILDEHC-KSKNGASDRGSQTQRSSYDFVYLPMDFRKYWYNG 170
           TT+MI+NIPN+  +  LLN+LD HC +S       G +   S+YDFVYLP+DF     N 
Sbjct: 441 TTVMIRNIPNKYSQKLLLNMLDNHCIQSNEWIVASGEEQPFSAYDFVYLPIDF-----NN 500

Query: 171 KISNLGYAFVNFTTAAAASEFCKAYHRRHWEVLLNNKVCEIRRAKLQGLKALMEAFRNKI 230
           K  N+GY FVN T+  A     KA+H++ WEV  + K+C++  A++QGL+AL E F+N  
Sbjct: 501 K-CNVGYGFVNLTSPEARVRLYKAFHKQPWEVYNSRKICQVTYARVQGLEALKEHFKNSK 560

Query: 231 FWCHANNYLPAVLEPPSDGCRSYRATP-VGR-----RISRPPPNR 269
           F C ++ YLP    P  DG       P VGR       S PP +R
Sbjct: 561 FPCDSDEYLPVAFSPARDGKELTDPVPIVGRSPAASSASSPPKSR 599

[Close]

BLAST of MC11g0682 vs. ExPASy Swiss-Prot
Match: Q652K6 (Protein MEI2-like 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ML6 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.7e-26
Identity = 66/174 (37.93%), Postives = 91/174 (52.30%), Query Frame = 0


Query: 96  PPVVTGDAEILPSETTTIMIKNIPNQLRRHHLLNILDEHCKSKNGASDR-----GSQTQR 155
           PP   G      + TT++MI+NIPN+  +  L+ ILD+HC  +NG   R     G    +
Sbjct: 159 PPCALG----FTATTTSLMIRNIPNKFLKARLMAILDQHCADENGKCHRRGGGGGRSVVK 218

Query: 156 SSYDFVYLPMDFRKYWYNGKISNLGYAFVNFTTAAAASEFCKAYHRRHWEVLLNNKVCEI 215
           S YDF Y+P+DF+  +      N GYAFVN TTA AA           W+  ++ KVC++
Sbjct: 219 SEYDFFYVPIDFKTGF------NKGYAFVNMTTATAARRLRAFLQDHRWDAAMSGKVCDV 278

Query: 216 RRAKLQGLKALMEAFRNKIFWCHANNYLPAVLEPPSDGCRSYRATPVGRRISRP 265
             A +QGL A +  F    F C    +LP   EPP DG +  +A  VGR + RP
Sbjct: 279 VPAAIQGLDAFVAHFSASCFPCRTKEFLPVWFEPPRDGEQQTKAHVVGRLVVRP 322

[Close]

BLAST of MC11g0682 vs. ExPASy Swiss-Prot
Match: Q6ET49 (Protein MEI2-like 7 OS=Oryza sativa subsp. japonica OX=39947 GN=OML7 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.9e-24
Identity = 62/149 (41.61%), Postives = 87/149 (58.39%), Query Frame = 0


Query: 111 TTIMIKNIPNQLRRHHLLNILDEHCKSKNGASDRGSQTQRSSYDFVYLPMDFRKYWYNGK 170
           TT+M++NIPN+L R  ++ +LD+HC  +N    RG +  R+ YD VY+ MDF       +
Sbjct: 216 TTVMVRNIPNKLTRSDMVRLLDDHCARENRRRGRGGE-PRAEYDLVYVRMDF-GMCNKER 275

Query: 171 ISNLGYAFVNFTTAAAASEFCKAYHRRHWE--VLLNNKVCEIRRAKLQGLKALMEAF-RN 230
            SN+GYAFVNFTTA AA    +A H   W+     + K+ +IR A++QG  AL+  F R 
Sbjct: 276 SSNMGYAFVNFTTAEAARGLQRALHGCRWKRSAFDSGKIIDIRAARIQGKDALVRHFGRT 335

Query: 231 KIFWCHANNYLPAVLEPPSDGCRSYRATP 257
             + C  + YLPAV  PP DG  +    P
Sbjct: 336 TYYECDTDEYLPAVFSPPRDGSTAGAGAP 362

[Close]

BLAST of MC11g0682 vs. NCBI nr
Match: KAG7031696.1 (Protein terminal ear1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 313 bits (803), Expect = 5.66e-104
Identity = 165/283 (58.30%), Postives = 195/283 (68.90%), Query Frame = 0


Query: 4   LNPNANPFHYTTPFHPNPQFVPLFKAFPVAAPSRALLWGPTHGYASYVD------HPMLP 63
           LNPNA+PF  TTP  P P         P       L   P HGY SY+       HP+  
Sbjct: 9   LNPNADPFPTTTPSLPPP---------PPHLRHALLSLPPLHGYQSYIHPYQPPHHPIFA 68

Query: 64  FYDVVPLPPPWPS-------SAANSVVGVVGQRNSGRKCKIGNWVPPVVTGDAEILPSET 123
           FY +VP P P+P        S   + VG    ++  +K KI  WVP       +++P ET
Sbjct: 69  FYHLVP-PLPFPGGGGGVSLSHLENPVGNGDVKSHHKKSKIKKWVPSA----PDLMPLET 128

Query: 124 TTIMIKNIPNQLRRHHLLNILDEHCKSKNGASDRGSQTQRSSYDFVYLPMDFRKYWYNGK 183
           TT+MIKNIPNQLRRH+LL ILDEHCK KN  S++ S   RS YDFVYLPMDF K+W++GK
Sbjct: 129 TTVMIKNIPNQLRRHNLLQILDEHCKCKNSYSNQNSF--RSEYDFVYLPMDFGKFWFDGK 188

Query: 184 ISNLGYAFVNFTTAAAASEFCKAYHRRHWEVLLNNKVCEIRRAKLQGLKALMEAFRNKIF 243
           +SNLGYAFVNFT++  ASEFCKAYHRR WEV +N KVCEI+RAK+QGL+ALMEAFRNK+F
Sbjct: 189 VSNLGYAFVNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKRAKIQGLEALMEAFRNKVF 248

Query: 244 WCHANNYLPAVLEPPSDGCRSYRATPVGRRISRPPPNRMKKCG 273
           WCHANNYLP VLEPPSDGCR YR TPVG+RI RPPP+ +KK G
Sbjct: 249 WCHANNYLPVVLEPPSDGCRRYRVTPVGKRIGRPPPSPIKKGG 275

[Close]

BLAST of MC11g0682 vs. NCBI nr
Match: KAG6608066.1 (Protein terminal ear1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 313 bits (803), Expect = 5.66e-104
Identity = 165/283 (58.30%), Postives = 195/283 (68.90%), Query Frame = 0


Query: 4   LNPNANPFHYTTPFHPNPQFVPLFKAFPVAAPSRALLWGPTHGYASYVD------HPMLP 63
           LNPNA+PF  TTP  P P         P       L   P HGY SY+       HP+  
Sbjct: 9   LNPNADPFPTTTPSIPPP---------PPHLRHALLSLPPLHGYQSYIHPYQPPHHPIFA 68

Query: 64  FYDVVPLPPPWPS-------SAANSVVGVVGQRNSGRKCKIGNWVPPVVTGDAEILPSET 123
           FY +VP P P+P        S   + VG    ++  +K KI  WVP       +++P ET
Sbjct: 69  FYHLVP-PLPFPGGGGGVSLSHLENPVGNGDVKSHHKKSKIKKWVPSA----PDLMPLET 128

Query: 124 TTIMIKNIPNQLRRHHLLNILDEHCKSKNGASDRGSQTQRSSYDFVYLPMDFRKYWYNGK 183
           TT+MIKNIPNQLRRH+LL ILDEHCK KN  S++ S   RS YDFVYLPMDF K+W++GK
Sbjct: 129 TTVMIKNIPNQLRRHNLLQILDEHCKCKNSYSNQNSF--RSEYDFVYLPMDFGKFWFDGK 188

Query: 184 ISNLGYAFVNFTTAAAASEFCKAYHRRHWEVLLNNKVCEIRRAKLQGLKALMEAFRNKIF 243
           +SNLGYAFVNFT++  ASEFCKAYHRR WEV +N KVCEI+RAK+QGL+ALMEAFRNK+F
Sbjct: 189 VSNLGYAFVNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKRAKIQGLEALMEAFRNKVF 248

Query: 244 WCHANNYLPAVLEPPSDGCRSYRATPVGRRISRPPPNRMKKCG 273
           WCHANNYLP VLEPPSDGCR YR TPVG+RI RPPP+ +KK G
Sbjct: 249 WCHANNYLPVVLEPPSDGCRRYRVTPVGKRIGRPPPSPIKKGG 275

[Close]

BLAST of MC11g0682 vs. NCBI nr
Match: XP_022940738.1 (protein MEI2-like 6 [Cucurbita moschata])

HSP 1 Score: 310 bits (795), Expect = 9.28e-103
Identity = 163/283 (57.60%), Postives = 194/283 (68.55%), Query Frame = 0


Query: 4   LNPNANPFHYTTPFHPNPQFVPLFKAFPVAAPSRALLWGPTHGYASYVD------HPMLP 63
           LNPNA+PF  TTP  P P         P       L   P HGY SY+       HP+  
Sbjct: 9   LNPNADPFPSTTPSRPPP---------PPHLRHALLSLPPLHGYQSYIHPYQPPHHPIFA 68

Query: 64  FYDVVPLPPPWPS-------SAANSVVGVVGQRNSGRKCKIGNWVPPVVTGDAEILPSET 123
           FY +VP P P+P        S   + VG    ++  +K KI  WVP       +++P ET
Sbjct: 69  FYHLVP-PLPFPGGGGGVSLSHLENPVGNGDVKSHHKKSKIKKWVPSA----PDLMPLET 128

Query: 124 TTIMIKNIPNQLRRHHLLNILDEHCKSKNGASDRGSQTQRSSYDFVYLPMDFRKYWYNGK 183
           TT+MIKNIPNQLRRH+LL ILDEHCK KN  S++ S   RS YDFVYLPMDF K+W++GK
Sbjct: 129 TTVMIKNIPNQLRRHNLLQILDEHCKCKNSYSNQNSF--RSEYDFVYLPMDFGKFWFDGK 188

Query: 184 ISNLGYAFVNFTTAAAASEFCKAYHRRHWEVLLNNKVCEIRRAKLQGLKALMEAFRNKIF 243
           +SNLGYAFVNFT++  ASEFCKAYHRR WEV +N KVCEI+RAK+QGL+ALMEAFRNK+F
Sbjct: 189 VSNLGYAFVNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKRAKIQGLEALMEAFRNKVF 248

Query: 244 WCHANNYLPAVLEPPSDGCRSYRATPVGRRISRPPPNRMKKCG 273
           WCHANNYLP +LEPPSDGCR YR T VG+RI RPPP+ +KK G
Sbjct: 249 WCHANNYLPVLLEPPSDGCRRYRVTAVGKRIGRPPPSPIKKGG 275

[Close]

BLAST of MC11g0682 vs. NCBI nr
Match: XP_038896615.1 (protein terminal ear1 homolog [Benincasa hispida])

HSP 1 Score: 299 bits (766), Expect = 5.76e-98
Identity = 169/309 (54.69%), Postives = 202/309 (65.37%), Query Frame = 0


Query: 4   LNPNANPFHYTTPFHPNPQ--FVPLFKAFPVAAPSRALLWGPTHGYAS---YVDHPMLP- 63
           LNPNA+PF YTTPF   P+  F+P++K      P + +L  P H Y     Y+ H  +  
Sbjct: 5   LNPNADPFLYTTPFVSPPKLHFIPIYKT-----PPKLILAPPLHAYVEVDPYLHHYSMYS 64

Query: 64  ----FYDVVP-LPPPWPSS-----AANSVV------GVVGQRNSGRK---CKIGNWVP-- 123
               FYDVVP +P  WP S         VV      G V + N G +   CK+  WVP  
Sbjct: 65  DSELFYDVVPQVPSSWPCSDGFCGGGGGVVSHSQGEGYVAKNNKGERKYYCKVKEWVPQL 124

Query: 124 -----PVVTGDA--EILPSETTTIMIKNIPNQLRRHHLLNILDEHCKSKNGASDRGSQTQ 183
                P    D   ++LP +TTT+MIKNIPNQLRR+ L+NILDEHCK KN + ++ +  +
Sbjct: 125 HFRVPPESDNDTNFQLLPFQTTTLMIKNIPNQLRRNDLMNILDEHCKLKNASFEKNNDNR 184

Query: 184 -----RSSYDFVYLPMDFRKYWYNGKISNLGYAFVNFTTAAAASEFCKAYHRRHWEVLLN 243
                RS YDFVYLPMDFRK      ISNLGYAFVNFT   AASEF KA+HRR W V +N
Sbjct: 185 LDGRRRSEYDFVYLPMDFRK------ISNLGYAFVNFTNPTAASEFYKAFHRRQWNVAVN 244

Query: 244 NKVCEIRRAKLQGLKALMEAFRNKIFWCHANNYLPAVLEPPSDGCRSYRATPVGRRISRP 273
            KVCEI+RAKLQGLKALM+AFRNKIFWCHANNYLP +LEPPSDG R YRATPVG+RIS+P
Sbjct: 245 KKVCEIKRAKLQGLKALMDAFRNKIFWCHANNYLPVMLEPPSDGYRRYRATPVGKRISQP 302

[Close]

BLAST of MC11g0682 vs. NCBI nr
Match: KAA0052403.1 (protein terminal ear1-like protein [Cucumis melo var. makuwa] >TYK19229.1 protein terminal ear1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 265 bits (678), Expect = 1.05e-84
Identity = 154/300 (51.33%), Postives = 191/300 (63.67%), Query Frame = 0


Query: 4   LNPNANPFHYTTPFHPNPQFVPLFKAFPVAAPSRALLWGPTHGYASYV--------DHPM 63
           LNPNA+PF YTTPF   P  +          P   L+  P   +A+YV         H M
Sbjct: 5   LNPNADPFLYTTPFSSPPTKLQ-------CNPITRLILAPVPLHANYVFPYLHGQHHHHM 64

Query: 64  LP--FYDVVP----LPPP---------WPSSAANSVVGVVGQRNSGRKCKIGNWVPPVVT 123
               FY +VP    L PP          P S +      V ++      K+   V  V  
Sbjct: 65  FSGLFYGIVPQQVALSPPRSDGFCGGGGPVSYSQPQRFKVDRQMKCVPTKLHFDVADVNN 124

Query: 124 GDAE-ILPSET--TTIMIKNIPNQLRRHHLLNILDEHCKSKNGASDRGSQT----QRSSY 183
            +++ +LPS+T  TT+MIKNIPNQ R++HLLNILD+HCK KN   ++   +    +RS Y
Sbjct: 125 NNSDQVLPSQTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNLGYEKKKNSLDSRRRSEY 184

Query: 184 DFVYLPMDFRKYWYNGKISNLGYAFVNFTTAAAASEFCKAYHRRHWEVLLNNKVCEIRRA 243
           DFVYLPMDFRKYWY+GKISNLGYAFVNFT   AASEFC+A+H R W+V +N KVCEI+ A
Sbjct: 185 DFVYLPMDFRKYWYDGKISNLGYAFVNFTNPTAASEFCEAFHLRQWDVEVNKKVCEIKIA 244

Query: 244 KLQGLKALMEAFRNKIFWCHANNYLPAVLEPPSDGCRSYRATPVGRRISRPPPNRMKKCG 273
           KLQGLKAL +AF++KIFWCHAN+YLP +LEP SDG R YRA PVG+RI RPPP+ +KKCG
Sbjct: 245 KLQGLKALKDAFKDKIFWCHANSYLPVMLEPSSDGYRRYRAIPVGKRIGRPPPSSIKKCG 297

[Close]

BLAST of MC11g0682 vs. ExPASy TrEMBL
Match: A0A6J1FQ49 (protein MEI2-like 6 OS=Cucurbita moschata OX=3662 GN=LOC111446243 PE=4 SV=1)

HSP 1 Score: 310 bits (795), Expect = 4.49e-103
Identity = 163/283 (57.60%), Postives = 194/283 (68.55%), Query Frame = 0


Query: 4   LNPNANPFHYTTPFHPNPQFVPLFKAFPVAAPSRALLWGPTHGYASYVD------HPMLP 63
           LNPNA+PF  TTP  P P         P       L   P HGY SY+       HP+  
Sbjct: 9   LNPNADPFPSTTPSRPPP---------PPHLRHALLSLPPLHGYQSYIHPYQPPHHPIFA 68

Query: 64  FYDVVPLPPPWPS-------SAANSVVGVVGQRNSGRKCKIGNWVPPVVTGDAEILPSET 123
           FY +VP P P+P        S   + VG    ++  +K KI  WVP       +++P ET
Sbjct: 69  FYHLVP-PLPFPGGGGGVSLSHLENPVGNGDVKSHHKKSKIKKWVPSA----PDLMPLET 128

Query: 124 TTIMIKNIPNQLRRHHLLNILDEHCKSKNGASDRGSQTQRSSYDFVYLPMDFRKYWYNGK 183
           TT+MIKNIPNQLRRH+LL ILDEHCK KN  S++ S   RS YDFVYLPMDF K+W++GK
Sbjct: 129 TTVMIKNIPNQLRRHNLLQILDEHCKCKNSYSNQNSF--RSEYDFVYLPMDFGKFWFDGK 188

Query: 184 ISNLGYAFVNFTTAAAASEFCKAYHRRHWEVLLNNKVCEIRRAKLQGLKALMEAFRNKIF 243
           +SNLGYAFVNFT++  ASEFCKAYHRR WEV +N KVCEI+RAK+QGL+ALMEAFRNK+F
Sbjct: 189 VSNLGYAFVNFTSSKGASEFCKAYHRRQWEVSVNRKVCEIKRAKIQGLEALMEAFRNKVF 248

Query: 244 WCHANNYLPAVLEPPSDGCRSYRATPVGRRISRPPPNRMKKCG 273
           WCHANNYLP +LEPPSDGCR YR T VG+RI RPPP+ +KK G
Sbjct: 249 WCHANNYLPVLLEPPSDGCRRYRVTAVGKRIGRPPPSPIKKGG 275

[Close]

BLAST of MC11g0682 vs. ExPASy TrEMBL
Match: A0A5A7U920 (Protein terminal ear1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1493G00270 PE=4 SV=1)

HSP 1 Score: 265 bits (678), Expect = 5.09e-85
Identity = 154/300 (51.33%), Postives = 191/300 (63.67%), Query Frame = 0


Query: 4   LNPNANPFHYTTPFHPNPQFVPLFKAFPVAAPSRALLWGPTHGYASYV--------DHPM 63
           LNPNA+PF YTTPF   P  +          P   L+  P   +A+YV         H M
Sbjct: 5   LNPNADPFLYTTPFSSPPTKLQ-------CNPITRLILAPVPLHANYVFPYLHGQHHHHM 64

Query: 64  LP--FYDVVP----LPPP---------WPSSAANSVVGVVGQRNSGRKCKIGNWVPPVVT 123
               FY +VP    L PP          P S +      V ++      K+   V  V  
Sbjct: 65  FSGLFYGIVPQQVALSPPRSDGFCGGGGPVSYSQPQRFKVDRQMKCVPTKLHFDVADVNN 124

Query: 124 GDAE-ILPSET--TTIMIKNIPNQLRRHHLLNILDEHCKSKNGASDRGSQT----QRSSY 183
            +++ +LPS+T  TT+MIKNIPNQ R++HLLNILD+HCK KN   ++   +    +RS Y
Sbjct: 125 NNSDQVLPSQTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNLGYEKKKNSLDSRRRSEY 184

Query: 184 DFVYLPMDFRKYWYNGKISNLGYAFVNFTTAAAASEFCKAYHRRHWEVLLNNKVCEIRRA 243
           DFVYLPMDFRKYWY+GKISNLGYAFVNFT   AASEFC+A+H R W+V +N KVCEI+ A
Sbjct: 185 DFVYLPMDFRKYWYDGKISNLGYAFVNFTNPTAASEFCEAFHLRQWDVEVNKKVCEIKIA 244

Query: 244 KLQGLKALMEAFRNKIFWCHANNYLPAVLEPPSDGCRSYRATPVGRRISRPPPNRMKKCG 273
           KLQGLKAL +AF++KIFWCHAN+YLP +LEP SDG R YRA PVG+RI RPPP+ +KKCG
Sbjct: 245 KLQGLKALKDAFKDKIFWCHANSYLPVMLEPSSDGYRRYRAIPVGKRIGRPPPSSIKKCG 297

[Close]

BLAST of MC11g0682 vs. ExPASy TrEMBL
Match: A0A0A0KYM0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374120 PE=4 SV=1)

HSP 1 Score: 254 bits (650), Expect = 8.23e-81
Identity = 149/301 (49.50%), Postives = 187/301 (62.13%), Query Frame = 0


Query: 4   LNPNANPFHYTTPFHPNPQFVPLFKAFPVAAPSRALLWGPTHGYASYV-------DHPML 63
           LNPNA+PF YT PF   P  +         +P   L+ GP   +A+Y+        HPM 
Sbjct: 5   LNPNADPFFYTAPFSSPPMKLQ-------CSPIPRLILGPVPLHANYLVPYLHQHHHPMF 64

Query: 64  P--FYDVVPLPPPWPSSAANSVVGVVG----------QRNSG-RKCKIGNWVPPVVTGDA 123
              F  +VP      S  ++   G  G          QR  G RK K   WVP  +  D 
Sbjct: 65  SGFFNGIVPPQVALCSPRSDGFCGGGGGGGSISYSQPQRCEGDRKMK---WVPTKLHFDV 124

Query: 124 --------EILP--SETTTIMIKNIPNQLRRHHLLNILDEHCKSKNGASDRG---SQTQR 183
                   ++LP  ++TTT+MIKNIPNQ R++HLLNILD+HCK KN + ++       +R
Sbjct: 125 ADDNNNSDQVLPFRTQTTTLMIKNIPNQFRQNHLLNILDKHCKWKNASYEKKHSLDSCRR 184

Query: 184 SSYDFVYLPMDFRKYWYNGKISNLGYAFVNFTTAAAASEFCKAYHRRHWEVLLNNKVCEI 243
           S YDFVYLPMDFRKYWY+G+ISNLGYAFVNFT   AASEF +A+HRR W+V ++ KVCEI
Sbjct: 185 SEYDFVYLPMDFRKYWYDGQISNLGYAFVNFTNPTAASEFREAFHRRRWDVAVSKKVCEI 244

Query: 244 RRAKLQGLKALMEAFRNKIFWCHANNYLPAVLEPPSDGCRSYRATPVGRRISRPPPNRMK 271
           + AKLQGLKAL  A ++KIFWCHA++YLP +LEP SDG R YRA PVG+R+ RPPP   K
Sbjct: 245 KIAKLQGLKALNNALKDKIFWCHADSYLPVMLEPSSDGYRRYRAMPVGKRMDRPPPGSKK 295

[Close]

BLAST of MC11g0682 vs. ExPASy TrEMBL
Match: A0A6J1FEC5 (meiosis protein mei2-like OS=Cucurbita moschata OX=3662 GN=LOC111444947 PE=4 SV=1)

HSP 1 Score: 201 bits (511), Expect = 2.37e-59
Identity = 122/299 (40.80%), Postives = 159/299 (53.18%), Query Frame = 0


Query: 1   TAPLNPNANPFHYTTPFH---PNPQFVPLFKAFPVAAPSRALLWGPTHGYASYVDHPMLP 60
           + PLNPNA+PF    P     P+P FV  +        + A  W        +   P + 
Sbjct: 42  SKPLNPNADPFLSAPPTFLPPPSPHFVSGYGNLYYPRATSAYAW-------QFHSFPAVS 101

Query: 61  FYDVVPLPPPWPS----------SAANSVVGVVGQRNSGRKCKIG---NWVPPVVTGDAE 120
            Y+  P    WPS          + A+S +G     +SG    I     WV   ++ D +
Sbjct: 102 CYNAWPQVV-WPSYQPAVGFGGCAVADSKLGREFVVSSGPSRDIKCPPEWVQKKISSDED 161

Query: 121 ------------ILPSETTTIMIKNIPNQLRRHHLLNILDEHCKSKNGASDRGSQTQRSS 180
                       +  S  TT+MIKNIPNQ +R  LL +LD +C+  N   D       S 
Sbjct: 162 NNADVDDPVEKTVPCSGITTLMIKNIPNQFKRRDLLQLLDRYCQVMNQRRDSRPDFYVSE 221

Query: 181 YDFVYLPMDFRKYWYNGKISNLGYAFVNFTTAAAASEFCKAYHRRHWEVLLNNKVCEIRR 240
           YDFVYLPMDF + WY GK+SNLGYAFVNFTT+ AAS+FC  YH   W+V +N K+CEI  
Sbjct: 222 YDFVYLPMDFMRSWYEGKVSNLGYAFVNFTTSMAASQFCAVYHNYKWDVNVNKKICEITE 281

Query: 241 AKLQGLKALMEAFRNKIFWCHANNYLPAVLEPPSDGCRSYRATPVGRRISRPPPNRMKK 271
           A++QG +AL  AF+NKIFWC  + YLP +L P S+G R YR   VGRRI+R P   +KK
Sbjct: 282 ARIQGKEALKNAFKNKIFWCSNDQYLPVMLSPASNGRRRYRRVNVGRRIARLPRKPLKK 332

[Close]

BLAST of MC11g0682 vs. ExPASy TrEMBL
Match: A0A6J1JS67 (protein terminal ear1-like OS=Cucurbita maxima OX=3661 GN=LOC111489310 PE=4 SV=1)

HSP 1 Score: 199 bits (507), Expect = 9.43e-59
Identity = 119/299 (39.80%), Postives = 157/299 (52.51%), Query Frame = 0


Query: 1   TAPLNPNANPFHYTTPFH---PNPQFVPLFKAFPVAAPSRALLWGPTHGYASYVDHPMLP 60
           + PLNP+A+PF    P     P+P FV  +        + A  W        +   P + 
Sbjct: 42  SKPLNPDADPFLSAPPTFLPPPSPHFVSGYGNLYYPRATSAYAW-------QFHSFPAVS 101

Query: 61  FYDVVPLPPPWPSSAANSVVG--VVGQRNSGRKCKIGN-----------WVPPVVTGDAE 120
            Y+  P    WPS       G  VV     GR+  + +           W    ++GD +
Sbjct: 102 CYNAWPQVV-WPSYQPAVGFGGCVVADSKLGREFVVSSGPNRDIKCPTQWAEKKISGDED 161

Query: 121 ------------ILPSETTTIMIKNIPNQLRRHHLLNILDEHCKSKNGASDRGSQTQRSS 180
                       +  S  TT+MI+NIPNQ +R  LL +LD +C+  N   D       S 
Sbjct: 162 NNGDVDDPVEKTVPCSGITTLMIRNIPNQFKRRDLLQLLDRYCQVMNQRRDSRPDFYVSE 221

Query: 181 YDFVYLPMDFRKYWYNGKISNLGYAFVNFTTAAAASEFCKAYHRRHWEVLLNNKVCEIRR 240
           YDFVYLPMDF + WY GK+SNLGYAFVNFTT+ AAS+FC  YH   W+V +N K+CEI  
Sbjct: 222 YDFVYLPMDFMRSWYEGKVSNLGYAFVNFTTSMAASQFCAVYHNYKWDVNVNKKICEITE 281

Query: 241 AKLQGLKALMEAFRNKIFWCHANNYLPAVLEPPSDGCRSYRATPVGRRISRPPPNRMKK 271
           A++QG +AL  AF+NKIFWC  + YLP +L P S+G R YR   VGRRI+R P   +KK
Sbjct: 282 ARIQGKEALKNAFKNKIFWCSNDQYLPVMLSPASNGRRRYRRVNVGRRIARLPRKPLKK 332

[Close]

BLAST of MC11g0682 vs. TAIR 10
Match: AT1G37140.1 (MEI2 C-terminal RRM only like 1 )

HSP 1 Score: 138.3 bits (347), Expect = 9.4e-33
Identity = 72/152 (47.37%), Postives = 94/152 (61.84%), Query Frame = 0


Query: 111 TTIMIKNIPNQLRRHHLLNILDEHCKSKNGASDRGSQTQRSSYDFVYLPMDFRKYWYNGK 170
           T++M+KNIPN L R  LL ILD HC+  N         ++SSYDF+YLPMDF      GK
Sbjct: 84  TSVMVKNIPNCLGRMDLLRILDNHCRKHN---------EKSSYDFLYLPMDF------GK 143

Query: 171 ISNLGYAFVNFTTAAAASEFCKAYHRRHWE-VLLNNKVCEIRRAKLQGLKALMEAFRNKI 230
            +NLGYAFVNFT++ AA  F + +    W+ +    K+CEI  AK QG + L   FRN  
Sbjct: 144 RANLGYAFVNFTSSLAAERFRREFENFSWDNIGFRKKICEITVAKYQGKEELTRHFRNSR 203

Query: 231 FWCHANNYLPAVLEPPSDGCRSYRATPVGRRI 262
           F CH ++YLP VL PPS+G  +Y  T +G R+
Sbjct: 204 FTCHTDDYLPVVLSPPSNGFTAYTLTKLGYRV 220

[Close]

BLAST of MC11g0682 vs. TAIR 10
Match: AT3G26120.1 (terminal EAR1-like 1 )

HSP 1 Score: 124.4 bits (311), Expect = 1.4e-28
Identity = 68/144 (47.22%), Postives = 87/144 (60.42%), Query Frame = 0


Query: 111 TTIMIKNIPNQLRRHHLLNILDEHCKSKNGA------SDRGSQTQRSSYDFVYLPMDFRK 170
           TT+MIKNIPN+  +  LL++LD+HC   N A               SSYDFVYLPMDF  
Sbjct: 408 TTLMIKNIPNKYSQKLLLDMLDKHCIHINEAITEEHNKHESHHQPYSSYDFVYLPMDF-- 467

Query: 171 YWYNGKISNLGYAFVNFTTAAAASEFCKAYHRRHWEVLLNNKVCEIRRAKLQGLKALMEA 230
              N K  N+GY FVN T+  AA  F KA+H + WEV  ++K+C+I  A++QGL+ L E 
Sbjct: 468 ---NNK-CNVGYGFVNMTSPEAAWRFYKAFHGQRWEVFNSHKICQITYARVQGLEDLKEH 527

Query: 231 FRNKIFWCHANNYLPAVLEPPSDG 249
           F++  F C A  YLP V  PP DG
Sbjct: 528 FKSSKFPCEAELYLPVVFSPPRDG 545

[Close]

BLAST of MC11g0682 vs. TAIR 10
Match: AT1G67770.1 (terminal EAR1-like 2 )

HSP 1 Score: 122.5 bits (306), Expect = 5.3e-28
Identity = 74/196 (37.76%), Postives = 106/196 (54.08%), Query Frame = 0


Query: 65  PPPWPSSAANSVVGVVGQRNSGRKCK-----IGNWVPPVVTGDAEILPSE----TTTIMI 124
           PPP PS    S + +  Q+   +K K     +G+  P  +  +  I   E     TT+MI
Sbjct: 284 PPPPPSRMVKSDILMYKQQQKKKKKKYVKKNLGD--PYFMINENAITGGEFRDGRTTVMI 343

Query: 125 KNIPNQLRRHHLLNILDEHCKSKN-GASDRGSQTQRSSYDFVYLPMDFRKYWYNGKISNL 184
           KNIPN+  +  LL +LD HCK  N      G++T  SSYDFVYLP+DF         SN+
Sbjct: 344 KNIPNKYTQKLLLKMLDTHCKDCNQSVIKEGNKTPMSSYDFVYLPIDF------SNKSNV 403

Query: 185 GYAFVNFTTAAAASEFCKAYHRRHW-EVLLNNKVCEIRRAKLQGLKALMEAFRN-KIFWC 244
           GY FVN T+  A     K++H +HW +     K+CE+  A++QGL++L E F+N ++   
Sbjct: 404 GYGFVNMTSPEAVWRLYKSFHNQHWRDFTTTRKICEVTYARIQGLESLREHFKNVRLAGV 463

Query: 245 HANNYLPAVLEPPSDG 249
             + Y+P V  PP DG
Sbjct: 464 EIDEYMPVVFSPPRDG 471

[Close]

BLAST of MC11g0682 vs. TAIR 10
Match: AT1G37140.2 (MEI2 C-terminal RRM only like 1 )

HSP 1 Score: 92.0 bits (227), Expect = 7.7e-19
Identity = 44/94 (46.81%), Postives = 59/94 (62.77%), Query Frame = 0


Query: 169 GKISNLGYAFVNFTTAAAASEFCKAYHRRHWE-VLLNNKVCEIRRAKLQGLKALMEAFRN 228
           GK +NLGYAFVNFT++ AA  F + +    W+ +    K+CEI  AK QG + L   FRN
Sbjct: 96  GKRANLGYAFVNFTSSLAAERFRREFENFSWDNIGFRKKICEITVAKYQGKEELTRHFRN 155

Query: 229 KIFWCHANNYLPAVLEPPSDGCRSYRATPVGRRI 262
             F CH ++YLP VL PPS+G  +Y  T +G R+
Sbjct: 156 SRFTCHTDDYLPVVLSPPSNGFTAYTLTKLGYRV 189

[Close]

BLAST of MC11g0682 vs. TAIR 10
Match: AT5G07930.1 (MEI2 C-terminal RRM only like 2 )

HSP 1 Score: 86.3 bits (212), Expect = 4.2e-17
Identity = 54/165 (32.73%), Postives = 86/165 (52.12%), Query Frame = 0


Query: 69  PSSAANSVVGVVGQRNSGRKCKIGNW---VPPVVTGDAEILPSETTTIMIKNIPNQLRRH 128
           P +++  V G    R S   C+   W   + P V  + +      TT+M++NIPN+  R 
Sbjct: 98  PPTSSRRVFG----RRSYELCEKVTWRTSIKPEVESNGD----HITTVMLRNIPNRYTRE 157

Query: 129 HLLNILDEHCKSKNGASDRGSQTQRSSYDFVYLPMDFRKYWYNGKISNLGYAFVNFTTAA 188
            ++  +D+HC+  N  S +  +   S+YDF+YLP+DFR         N GYAFVNFT A 
Sbjct: 158 MMIQFMDKHCEEAN-KSGKNEEFTISAYDFIYLPIDFR------TTMNKGYAFVNFTNAK 217

Query: 189 AASEFCKAYHRRHWEVLLNNKVCEIRRAKLQGLKALMEAFRNKIF 231
           A S+F  A + + W    + K  EI  A++Q    L++ F++  +
Sbjct: 218 AVSKFKAACNNKPWCHFYSKKELEITYARIQA-NELVKRFQHMTY 246

The following BLAST results are available for this feature:

BLAST of MC11g0682 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2WY46	6.8e-28	42.68	Protein terminal ear1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=PLA2 PE=...	[more]
Q0JGS5	6.8e-28	42.68	Protein terminal ear1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=PLA2 P...	[more]
O65001	9.8e-27	42.42	Protein terminal ear1 OS=Zea mays OX=4577 GN=TE1 PE=2 SV=1	[more]
Q652K6	3.7e-26	37.93	Protein MEI2-like 6 OS=Oryza sativa subsp. japonica OX=39947 GN=ML6 PE=2 SV=1	[more]
Q6ET49	5.9e-24	41.61	Protein MEI2-like 7 OS=Oryza sativa subsp. japonica OX=39947 GN=OML7 PE=2 SV=1	[more]

BLAST of MC11g0682 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7031696.1	5.66e-104	58.30	Protein terminal ear1-like protein, partial [Cucurbita argyrosperma subsp. argyr...	[more]
KAG6608066.1	5.66e-104	58.30	Protein terminal ear1-like protein, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022940738.1	9.28e-103	57.60	protein MEI2-like 6 [Cucurbita moschata]	[more]
XP_038896615.1	5.76e-98	54.69	protein terminal ear1 homolog [Benincasa hispida]	[more]
KAA0052403.1	1.05e-84	51.33	protein terminal ear1-like protein [Cucumis melo var. makuwa] >TYK19229.1 protei...	[more]

BLAST of MC11g0682 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FQ49	4.49e-103	57.60	protein MEI2-like 6 OS=Cucurbita moschata OX=3662 GN=LOC111446243 PE=4 SV=1	[more]
A0A5A7U920	5.09e-85	51.33	Protein terminal ear1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A0A0KYM0	8.23e-81	49.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G374120 PE=4 SV=1	[more]
A0A6J1FEC5	2.37e-59	40.80	meiosis protein mei2-like OS=Cucurbita moschata OX=3662 GN=LOC111444947 PE=4 SV=...	[more]
A0A6J1JS67	9.43e-59	39.80	protein terminal ear1-like OS=Cucurbita maxima OX=3661 GN=LOC111489310 PE=4 SV=1	[more]

BLAST of MC11g0682 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G37140.1	9.4e-33	47.37	MEI2 C-terminal RRM only like 1	[more]
AT3G26120.1	1.4e-28	47.22	terminal EAR1-like 1	[more]
AT1G67770.1	5.3e-28	37.76	terminal EAR1-like 2	[more]
AT1G37140.2	7.7e-19	46.81	MEI2 C-terminal RRM only like 1	[more]
AT5G07930.1	4.2e-17	32.73	MEI2 C-terminal RRM only like 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007201	Mei2-like, C-terminal RNA recognition motif	PFAM	PF04059	RRM_2	coord: 111..226 e-value: 1.5E-17 score: 63.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 106..219 e-value: 1.8E-5 score: 26.7
None	No IPR available	PANTHER	PTHR24012:SF803	MEI2 C-TERMINAL RRM ONLY LIKE 1	coord: 90..258
None	No IPR available	PANTHER	PTHR24012	RNA BINDING PROTEIN	coord: 90..258
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 98..218

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g0682.1	MC11g0682.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding