MC11g0633 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0633
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial
Location	MC11: 5076115 .. 5079967 (-)
RNA-Seq Expression	MC11g0633
Synteny	MC11g0633

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAACATTTTATTTTTTATTTGTATAGAGTAGGCGCAATAGAAAACTTGGCGATACGTTCGACTTTCCCCCCTTCACGATTAGGATGGGAAGCAAAGCTCTGCCTCTGCTCAAAGGAGCTTTATCACTCCCATCATTGCAGCGCCAAATCTTCATTTATAATGGCTTCCAATTCCATACGCTACCTATTTCTAGCAACAAAATCCGAAAATGTTCGACTACTCCACGGATTCGGGCCTCTCTTCAACCTCCGGATGTGCCTCGTTTAGCTGAAACAGCTCGAATCTCTCTCACTCCAACTGAGGTATGCGAGGTCTTCACCACCTCAATGTGTTCTTCTGTTTCTTTAAATTTTCCAACTAATTGAAATAGGTATTACTTTTCGTGTTTGCTTCCTCTTTGTTTGTCTGATTCAGGTTGAAGAGTTTGCTCCTAAAATTAGACAAGTTGTTGACTGGTAAGTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTATCTCCCGCTAGCTTACAGAAAGTACTGCGCTATGTATTTTGTATAATTTGGTACGAACTGATTGTATACTAATGAGTTCCATATTAACGTTTAAAGGAGGAGGTCTTGACTAATAGATCTTGAAACACATTTGGTATCTTGATGAATATTAATGTATGTTAACGCAAGAATAGAATACTCACACTCTCTACGAGGTAAAAGTAGGTTATTCAAAGTTCTTGACCTGTGACAGGCATAAGATTTAGATTATGAGTCTGTGGCTTCTGTAGGGAATATGAAGTTATCAAGAATGTTGTCTTGTTTTCTTAGTTGAGACTGAGAGTAGGATCTGTGTTGGACGTAGGAGGTGGAATATGTTCACTGGTATTGTCTTTCTTGGTAATTTGGCCTCTTGGTAACTTACTATGAGACAAGTTCCTGTTATGCCTTAGACACTGGGGGAATACTTCTCTAAACCGGAAGGGTGAAGAGATCAAATTTCAAGCGTGATTACAAAAATTTGTTTGAGTGTGATCTTTAAGGAGATGTAAAAGAAAAGAAAAGGCCAGGTAGTGGGCAACTTCTCAAAAGACTGGAAGTTAAATTATTTTGTTGTTTTGTAACATTTTTTACATTAAATTTCTAGTTTAAAGATAATCACATGAGCGATTAGAGCATTCGCAATGTAGTTCTGATAGCTCTTTTTTCACTTTGAAGTTAATAATACTCGAAAGCTTCCTCTGTTCATTGTTGATTTTTTAACAATGTGTAAGCATCAAACTCATGAATCTGGAGGACTCTCCTAACTAGGATTGCGAGTCTTATTAAACTGGAAAATATATTATTCCCTTGTGGTACAAACATACTTTAATATAGCCTTTTAGGACTACTCTTCTAAATTAAAGCTCTGTTTCCTAAAAAAGCTCTAAAGCGGCCTTCTAAACTTGAGGTTCCAACCATTAGTAGCTACATTCCAGTGAATCAGTAATCCCCGGCCTGGATGGAGTCCACATTAGTGAGGTAGGAAATTTTGGAAATTTTCTCCTTCAGAGGCTGTAAGGCAATACACCGATCTGAGGCGCCATAACCACCTTAACATTCAAAACTACCTTCGTCCTCTCTACATTTAGCAATGAAATTCCAGGGAGAGGGACTTTTGCCATTGTAGTTTCCAAAGTGATGCAGCCATTTTTAGCCAAACCATATTTGCTTATAACGATGTTCATCTTGGAGAAATTTTGGTCACGAGAGAAATGCCGCTTGCATTTGAAAGGTAAAGCCACATTTCTGTTTTTGAGATAGCCCAGGCTGAGGTCTCCTTTCCCAAGATTACAAGTTTCAATTTTCACTTCATGAGGTGACTTCTGCTATGGTGCCACCAATAGGTAGTAGGTTGGGATGCTGGGTAGAAGTCGAACTGACTGGATTAAGGTCATGTGCCTTCGCTACCAAGTTAAAATCTTGTGTCCTATTTTCTTTTATAATTGTCTTCAATGTAACTTTGATTTCTGTATAGGTTGGAAGTATCGAGACTGAAATAAAACCATATATTTGTATGTTGGTTGAGTCACTCAAGAGTCGAGAGTCAAGACTATTTACTGAGATAGAAGCATTCGGAGCATGAGTTATACATTTTTTCCAATGAAATTGTTCGTTCTGTTAACTCTATTCTCTCAGGTGTTGTATCCTTTAGTTTCTAATAACTTTAATATGAAAAATATTATGCAATGCTGCAGGTTTGGGCAGCTCCAGACGGTTGATCTTCAAAGTATTGAGCCTTCCATAAGAGCAGGTGCATGCCACCACTTTTAGGAGTTCATTATTGTCAATCATTCTTTTAACGTTGTTTGTTGTTCTTCTAGCAATGCCTTTGCATGTTTCTCACTATTAAGTGTTGCCTCCAAAGCACATAAGCCTTTCTAAAATGTAAATTCTACATGACAAAATGATATTTTCATTGGAAAATAATAATCATTATTCATAAGACATGGAGGTATTGCCTTTTTCTCGCGACGGATGCTAGGTGAGGCAATGAAGCACATTATGAAGGGGATAGCACCAATAGGATCCGAAACTTTGTTCTGTTTACTTGTGCTATCATGGCCAAGATAATTGATTACGGTTTCACAATCCCAATAAAGCTGCTCCCCACAAACATTTATACATATTTCTGGGACTGGGGGAACAGTTGGAGCATGGATTCTATCAAGTGATTAAGATGCTAAAACCTCAAGTTTTGTGTCGGCAAGATAGGAAAACAACTGTTGTGCAGCAAAAATTAGTACTAATTTTCATAATATTTACAGATACTGAAGGTGGCAATCAGCGGAATGATATTTCTGAAACATTTGAGAATAGGTAACCTGGTTCTTTTTCAACATGGGCTATCATAACGTTTGGCAGAAAATTTTAGCCATAATTTCGAAATTTTTATTTTTATTTTTTCTCAGAGAGGCCATGATTGGCGCAGTTCCAGTCTTTGATGAACCGTACATTAGAGTTCCTAAAGTTCTGAATAAGGAGTAGTTGTGAAGGTAGGTAGTTCATTTCATCTGTCTGATTATGTCGCTGAAATTATTTATTGTGCTTTCCGTCTAATTTTTCCACAGGCTACTAGATGATATTTGAATTTCAATCAGAATTAATCATCTAATAATCTTAATCTTACTTTAAATGTTTTTACTCGCACATTTCTGATTTCACTCAAGCTAGGGGAACTGATCACTGCACATAATGGTAGCCGCATAAGATGTTTATCTAAAACTCAAATTTTTTTTTTTTTTTTCTGTTGGGAAATGAACCTGGCCTTGTTTTGATTATTAAATCTTCTTGGAGAGATGCTATACATAACCTCATCTTTTTTTGTTTTTTTCTCTCTAAATTGTAATGATTATTATAATTTCTGTATTTGGTTTAAAGTTTTGTTCTTTTTTTACATGAAGAAAAATCAACGGTCCAGATTCGAATCCTTGCAGATATTATATTTCTTCTCACAGGCTTGTCTCTTAGGCTGCTACAGGGTATGGCTTCGCTGGGTCCACTGGTTACCTAAGTAAGAGGTTGAAATGCCCAATAAGAATATTTAGAATATAATAATTATAAATATGTAACAACTTGATACGCCATGTTAAATTAAGAAATCAAATCTGGATGGCCTCCATAAAATAATCAACAATTTGCTTTAAATCTGTACTCAAATCTCAATATTAGAGTTTAATTTGAATGTCGTGCACGTCAAGTTCCCGTTAGGCAAGGCCGTCTGAAGCTACTAAATTTGAGTTCGAACCTGTAGTTAATCTTTTAAAGTTAATTGTATATAACATTGGATTATTATTTTGCAAGAAAAAGGATGGAATCAATGGCGGCGA

mRNA sequence

CAAACATTTTATTTTTTATTTGTATAGAGTAGGCGCAATAGAAAACTTGGCGATACGTTCGACTTTCCCCCCTTCACGATTAGGATGGGAAGCAAAGCTCTGCCTCTGCTCAAAGGAGCTTTATCACTCCCATCATTGCAGCGCCAAATCTTCATTTATAATGGCTTCCAATTCCATACGCTACCTATTTCTAGCAACAAAATCCGAAAATGTTCGACTACTCCACGGATTCGGGCCTCTCTTCAACCTCCGGATGTGCCTCGTTTAGCTGAAACAGCTCGAATCTCTCTCACTCCAACTGAGGTTGAAGAGTTTGCTCCTAAAATTAGACAAGTTGTTGACTGGTTTGGGCAGCTCCAGACGGTTGATCTTCAAAGTATTGAGCCTTCCATAAGAGCAGATACTGAAGGTGGCAATCAGCGGAATGATATTTCTGAAACATTTGAGAATAGAGAGGCCATGATTGGCGCAGTTCCAGTCTTTGATGAACCGTACATTAGAGTTCCTAAAGTTCTGAATAAGGAGTAGTTGTGAAGATATTATATTTCTTCTCACAGGCTTGTCTCTTAGGCTGCTACAGGGTATGGCTTCGCTGGGTCCACTGGTTACCTAAGTAAGAGGTTGAAATGCCCAATAAGAATATTTAGAATATAATAATTATAAATATGTAACAACTTGATACGCCATGTTAAATTAAGAAATCAAATCTGGATGGCCTCCATAAAATAATCAACAATTTGCTTTAAATCTGTACTCAAATCTCAATATTAGAGTTTAATTTGAATGTCGTGCACGTCAAGTTCCCGTTAGGCAAGGCCGTCTGAAGCTACTAAATTTGAGTTCGAACCTGTAGTTAATCTTTTAAAGTTAATTGTATATAACATTGGATTATTATTTTGCAAGAAAAAGGATGGAATCAATGGCGGCGA

Coding sequence (CDS)

ATGGGAAGCAAAGCTCTGCCTCTGCTCAAAGGAGCTTTATCACTCCCATCATTGCAGCGCCAAATCTTCATTTATAATGGCTTCCAATTCCATACGCTACCTATTTCTAGCAACAAAATCCGAAAATGTTCGACTACTCCACGGATTCGGGCCTCTCTTCAACCTCCGGATGTGCCTCGTTTAGCTGAAACAGCTCGAATCTCTCTCACTCCAACTGAGGTTGAAGAGTTTGCTCCTAAAATTAGACAAGTTGTTGACTGGTTTGGGCAGCTCCAGACGGTTGATCTTCAAAGTATTGAGCCTTCCATAAGAGCAGATACTGAAGGTGGCAATCAGCGGAATGATATTTCTGAAACATTTGAGAATAGAGAGGCCATGATTGGCGCAGTTCCAGTCTTTGATGAACCGTACATTAGAGTTCCTAAAGTTCTGAATAAGGAGTAG

Protein sequence

MGSKALPLLKGALSLPSLQRQIFIYNGFQFHTLPISSNKIRKCSTTPRIRASLQPPDVPRLAETARISLTPTEVEEFAPKIRQVVDWFGQLQTVDLQSIEPSIRADTEGGNQRNDISETFENREAMIGAVPVFDEPYIRVPKVLNKE

Homology

[Close]

BLAST of MC11g0633 vs. ExPASy Swiss-Prot
Match: D7STK2 (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Vitis vinifera OX=29760 GN=GATC PE=3 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 4.9e-41
Identity = 89/147 (60.54%), Postives = 108/147 (73.47%), Query Frame = 0


Query: 1   MGSKALPLLKGALSLPSLQRQIFIYNGFQFHTLPISSNKIRKCSTTPRIRASLQPPDVPR 60
           MGS+AL LLK   +      +  ++      +  +  N  R  ST    R++L PPD+PR
Sbjct: 1   MGSRALLLLKATTA------ETLLFTSKSTFSKALIRNSTRSFST----RSALLPPDLPR 60

Query: 61  LAETARISLTPTEVEEFAPKIRQVVDWFGQLQTVDLQSIEPSIRADTEGGNQRNDISETF 120
           LAETARISLTP EVEEFAPKIRQV+DWFGQLQ VDLQSIEPSIRADTEG N R+D  ETF
Sbjct: 61  LAETARISLTPHEVEEFAPKIRQVIDWFGQLQAVDLQSIEPSIRADTEGDNLRDDSPETF 120

Query: 121 ENREAMIGAVPVFDEPYIRVPKVLNKE 148
           ENREA+I A+P ++EPY++VPKVLNK+
Sbjct: 121 ENREAIIAAIPSYEEPYLKVPKVLNKD 137

[Close]

BLAST of MC11g0633 vs. ExPASy Swiss-Prot
Match: B9RRX2 (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Ricinus communis OX=3988 GN=GATC PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.9e-37
Identity = 88/147 (59.86%), Postives = 105/147 (71.43%), Query Frame = 0


Query: 1   MGSKALPLLKGALSLPSLQRQIFIYNGFQFHTLPISSNKIRKCSTTPRIRASLQPPDVPR 60
           MGS+AL LLK AL    L+ QI   N  +         K R+ S      +SLQPPDV R
Sbjct: 1   MGSRALLLLKVAL---PLKHQIKCLNYTKITPASELLTK-RRFSIKATNGSSLQPPDVSR 60

Query: 61  LAETARISLTPTEVEEFAPKIRQVVDWFGQLQTVDLQSIEPSIRADTEGGNQRNDISETF 120
           LAETARISL   EVEEFAPKIRQV+DWFGQLQ VDL S+EP+IRAD+EG N R+D+ ETF
Sbjct: 61  LAETARISLNQNEVEEFAPKIRQVIDWFGQLQAVDLNSVEPAIRADSEGENLRDDVPETF 120

Query: 121 ENREAMIGAVPVFDEPYIRVPKVLNKE 148
             REA+I AVP +++PY++VPKVLNKE
Sbjct: 121 SEREAIIAAVPSYEKPYVKVPKVLNKE 143

[Close]

BLAST of MC11g0633 vs. ExPASy Swiss-Prot
Match: B9INH0 (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Populus trichocarpa OX=3694 GN=GATC PE=3 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.4e-35
Identity = 85/148 (57.43%), Postives = 105/148 (70.95%), Query Frame = 0


Query: 1   MGSKALPLLKGALSLPSLQRQIFIYNGFQFHTLPISSNKIRKCSTTPRIR-ASLQPPDVP 60
           MGS+A+ LLKG    P     +F+ N  +    P     IR+ +T      +SL+PPDV 
Sbjct: 1   MGSRAVLLLKG--PSPPKHSILFLLNHKKISPAP----SIRRFTTKATANGSSLEPPDVA 60

Query: 61  RLAETARISLTPTEVEEFAPKIRQVVDWFGQLQTVDLQSIEPSIRADTEGGNQRNDISET 120
           RLAETARISLTP +VEEF PKIRQV+DW   L +VDL S+EPSIRADTEG N R+D  ET
Sbjct: 61  RLAETARISLTPQQVEEFGPKIRQVIDWHA-LLSVDLDSVEPSIRADTEGDNLRHDNPET 120

Query: 121 FENREAMIGAVPVFDEPYIRVPKVLNKE 148
           FENREA+I AVP +++PY++VPKVLNKE
Sbjct: 121 FENREAIIAAVPNYEDPYVKVPKVLNKE 141

[Close]

BLAST of MC11g0633 vs. ExPASy Swiss-Prot
Match: A2XK57 (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=GATC PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.2e-32
Identity = 67/97 (69.07%), Postives = 81/97 (83.51%), Query Frame = 0


Query: 52  SLQPPDVPRLAETARISLTPTEVEEFAPKIRQVVDWFGQLQTVDLQSIEPSIRADTEGGN 111
           +L+PPD+PRLA  ARISL+P E EEFAPKIRQVVDWFGQLQ VDL+S+EPS+RA T  GN
Sbjct: 57  ALEPPDLPRLANAARISLSPEEAEEFAPKIRQVVDWFGQLQAVDLESVEPSLRAGTAAGN 116

Query: 112 Q-RNDISETFENREAMIGAVPVFDEPYIRVPKVLNKE 148
             R D  ETF NR+A+I +VP +D+PYI+VP+VLNKE
Sbjct: 117 SLREDRPETFTNRDAIIESVPSYDDPYIKVPRVLNKE 153

[Close]

BLAST of MC11g0633 vs. ExPASy Swiss-Prot
Match: Q7XZZ1 (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=GATC PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.2e-32
Identity = 67/97 (69.07%), Postives = 81/97 (83.51%), Query Frame = 0


Query: 52  SLQPPDVPRLAETARISLTPTEVEEFAPKIRQVVDWFGQLQTVDLQSIEPSIRADTEGGN 111
           +L+PPD+PRLA  ARISL+P E EEFAPKIRQVVDWFGQLQ VDL+S+EPS+RA T  GN
Sbjct: 57  ALEPPDLPRLANAARISLSPEEAEEFAPKIRQVVDWFGQLQAVDLESVEPSLRAGTAAGN 116

Query: 112 Q-RNDISETFENREAMIGAVPVFDEPYIRVPKVLNKE 148
             R D  ETF NR+A+I +VP +D+PYI+VP+VLNKE
Sbjct: 117 SLREDRPETFTNRDAIIESVPSYDDPYIKVPRVLNKE 153

[Close]

BLAST of MC11g0633 vs. NCBI nr
Match: XP_022143239.1 (glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Momordica charantia] >XP_022143247.1 glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Momordica charantia])

HSP 1 Score: 290 bits (743), Expect = 6.69e-99
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MGSKALPLLKGALSLPSLQRQIFIYNGFQFHTLPISSNKIRKCSTTPRIRASLQPPDVPR 60
           MGSKALPLLKGALSLPSLQRQIFIYNGFQFHTLPISSNKIRKCSTTPRIRASLQPPDVPR
Sbjct: 1   MGSKALPLLKGALSLPSLQRQIFIYNGFQFHTLPISSNKIRKCSTTPRIRASLQPPDVPR 60

Query: 61  LAETARISLTPTEVEEFAPKIRQVVDWFGQLQTVDLQSIEPSIRADTEGGNQRNDISETF 120
           LAETARISLTPTEVEEFAPKIRQVVDWFGQLQTVDLQSIEPSIRADTEGGNQRNDISETF
Sbjct: 61  LAETARISLTPTEVEEFAPKIRQVVDWFGQLQTVDLQSIEPSIRADTEGGNQRNDISETF 120

Query: 121 ENREAMIGAVPVFDEPYIRVPKVLNKE 147
           ENREAMIGAVPVFDEPYIRVPKVLNKE
Sbjct: 121 ENREAMIGAVPVFDEPYIRVPKVLNKE 147

[Close]

BLAST of MC11g0633 vs. NCBI nr
Match: XP_038897282.1 (glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Benincasa hispida] >XP_038897283.1 glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Benincasa hispida])

HSP 1 Score: 239 bits (611), Expect = 8.38e-79
Identity = 125/147 (85.03%), Postives = 132/147 (89.80%), Query Frame = 0


Query: 1   MGSKALPLLKGALSLPSLQRQIFIYNGFQFHTLPISSNKIRKCSTTPRIRASLQPPDVPR 60
           MGSKALPLLKGA S PSL+ +IFI  G   H+LP S  +IRKCST  RI ASLQPPDVPR
Sbjct: 1   MGSKALPLLKGASSCPSLKLRIFISTGL--HSLPASLIRIRKCSTASRILASLQPPDVPR 60

Query: 61  LAETARISLTPTEVEEFAPKIRQVVDWFGQLQTVDLQSIEPSIRADTEGGNQRNDISETF 120
           LAETARISLTPT+VEEFAPKIRQVVDWFGQLQTVDLQSIEP+IRADTEGGNQRNDI ETF
Sbjct: 61  LAETARISLTPTQVEEFAPKIRQVVDWFGQLQTVDLQSIEPAIRADTEGGNQRNDIPETF 120

Query: 121 ENREAMIGAVPVFDEPYIRVPKVLNKE 147
           ENREAMIGAVPVFDEPYI+VPKVLNKE
Sbjct: 121 ENREAMIGAVPVFDEPYIKVPKVLNKE 145

[Close]

BLAST of MC11g0633 vs. NCBI nr
Match: XP_008466091.1 (PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Cucumis melo] >KAA0038633.1 glutamyl-tRNA(Gln) amidotransferase subunit C [Cucumis melo var. makuwa] >TYK31232.1 glutamyl-tRNA(Gln) amidotransferase subunit C [Cucumis melo var. makuwa])

HSP 1 Score: 236 bits (602), Expect = 1.97e-77
Identity = 122/147 (82.99%), Postives = 131/147 (89.12%), Query Frame = 0


Query: 1   MGSKALPLLKGALSLPSLQRQIFIYNGFQFHTLPISSNKIRKCSTTPRIRASLQPPDVPR 60
           MGSKALPLLKGA S PSL+RQIFI   F  H+LP+S+  IRK ST   + ASLQPPDVPR
Sbjct: 1   MGSKALPLLKGASSFPSLKRQIFISTAF--HSLPVSNITIRKSSTASGVLASLQPPDVPR 60

Query: 61  LAETARISLTPTEVEEFAPKIRQVVDWFGQLQTVDLQSIEPSIRADTEGGNQRNDISETF 120
           LA+TARISLTPT+VEEFAPKI QVVDWFGQLQTVDLQSIEPSIRADTEGGNQRND+ ETF
Sbjct: 61  LAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIEPSIRADTEGGNQRNDVPETF 120

Query: 121 ENREAMIGAVPVFDEPYIRVPKVLNKE 147
           ENREAMIGAVPVFDEPYI+VPKVLNKE
Sbjct: 121 ENREAMIGAVPVFDEPYIKVPKVLNKE 145

[Close]

BLAST of MC11g0633 vs. NCBI nr
Match: XP_022941306.1 (glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Cucurbita moschata] >XP_022941307.1 glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Cucurbita moschata] >KAG6608102.1 Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 236 bits (601), Expect = 2.80e-77
Identity = 124/147 (84.35%), Postives = 130/147 (88.44%), Query Frame = 0


Query: 1   MGSKALPLLKGALSLPSLQRQIFIYNGFQFHTLPISSNKIRKCSTTPRIRASLQPPDVPR 60
           MGS AL LLKGA SLPSL  QIFI      ++LP+SS +IRKCST P IRASLQPPDVPR
Sbjct: 1   MGSGALRLLKGASSLPSLNPQIFISTSL--NSLPVSSIRIRKCSTAPGIRASLQPPDVPR 60

Query: 61  LAETARISLTPTEVEEFAPKIRQVVDWFGQLQTVDLQSIEPSIRADTEGGNQRNDISETF 120
           LAETARISL P EVEEFAPKIRQVVDWFGQLQ VDLQSIEPSIRADTEGGNQR+D+SETF
Sbjct: 61  LAETARISLNPNEVEEFAPKIRQVVDWFGQLQAVDLQSIEPSIRADTEGGNQRDDVSETF 120

Query: 121 ENREAMIGAVPVFDEPYIRVPKVLNKE 147
           ENREAMIGAVPVFDEPYIRVPKVLNKE
Sbjct: 121 ENREAMIGAVPVFDEPYIRVPKVLNKE 145

[Close]

BLAST of MC11g0633 vs. NCBI nr
Match: XP_023521629.1 (glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo] >XP_023521637.1 glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 233 bits (593), Expect = 4.64e-76
Identity = 122/147 (82.99%), Postives = 130/147 (88.44%), Query Frame = 0


Query: 1   MGSKALPLLKGALSLPSLQRQIFIYNGFQFHTLPISSNKIRKCSTTPRIRASLQPPDVPR 60
           M S AL LLKGA SLPSL  QIFI      ++LP+S+ +IRKCST P IRASLQPPDVPR
Sbjct: 1   MASGALRLLKGASSLPSLNPQIFISTSL--NSLPVSNIRIRKCSTAPGIRASLQPPDVPR 60

Query: 61  LAETARISLTPTEVEEFAPKIRQVVDWFGQLQTVDLQSIEPSIRADTEGGNQRNDISETF 120
           LAETARISL P+EVEEFAPKIRQVVDWFGQLQ VDLQSIEPSIRADTEGGNQR+D+SETF
Sbjct: 61  LAETARISLNPSEVEEFAPKIRQVVDWFGQLQAVDLQSIEPSIRADTEGGNQRDDVSETF 120

Query: 121 ENREAMIGAVPVFDEPYIRVPKVLNKE 147
           ENREAMIGAVPVFDEPYIRVPKVLNKE
Sbjct: 121 ENREAMIGAVPVFDEPYIRVPKVLNKE 145

[Close]

BLAST of MC11g0633 vs. ExPASy TrEMBL
Match: A0A6J1CQ90 (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Momordica charantia OX=3673 GN=LOC111013151 PE=3 SV=1)

HSP 1 Score: 290 bits (743), Expect = 3.24e-99
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0


Query: 1   MGSKALPLLKGALSLPSLQRQIFIYNGFQFHTLPISSNKIRKCSTTPRIRASLQPPDVPR 60
           MGSKALPLLKGALSLPSLQRQIFIYNGFQFHTLPISSNKIRKCSTTPRIRASLQPPDVPR
Sbjct: 1   MGSKALPLLKGALSLPSLQRQIFIYNGFQFHTLPISSNKIRKCSTTPRIRASLQPPDVPR 60

Query: 61  LAETARISLTPTEVEEFAPKIRQVVDWFGQLQTVDLQSIEPSIRADTEGGNQRNDISETF 120
           LAETARISLTPTEVEEFAPKIRQVVDWFGQLQTVDLQSIEPSIRADTEGGNQRNDISETF
Sbjct: 61  LAETARISLTPTEVEEFAPKIRQVVDWFGQLQTVDLQSIEPSIRADTEGGNQRNDISETF 120

Query: 121 ENREAMIGAVPVFDEPYIRVPKVLNKE 147
           ENREAMIGAVPVFDEPYIRVPKVLNKE
Sbjct: 121 ENREAMIGAVPVFDEPYIRVPKVLNKE 147

[Close]

BLAST of MC11g0633 vs. ExPASy TrEMBL
Match: A0A5A7T6R5 (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Cucumis melo var. makuwa OX=1194695 GN=GATC PE=3 SV=1)

HSP 1 Score: 236 bits (602), Expect = 9.55e-78
Identity = 122/147 (82.99%), Postives = 131/147 (89.12%), Query Frame = 0


Query: 1   MGSKALPLLKGALSLPSLQRQIFIYNGFQFHTLPISSNKIRKCSTTPRIRASLQPPDVPR 60
           MGSKALPLLKGA S PSL+RQIFI   F  H+LP+S+  IRK ST   + ASLQPPDVPR
Sbjct: 1   MGSKALPLLKGASSFPSLKRQIFISTAF--HSLPVSNITIRKSSTASGVLASLQPPDVPR 60

Query: 61  LAETARISLTPTEVEEFAPKIRQVVDWFGQLQTVDLQSIEPSIRADTEGGNQRNDISETF 120
           LA+TARISLTPT+VEEFAPKI QVVDWFGQLQTVDLQSIEPSIRADTEGGNQRND+ ETF
Sbjct: 61  LAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIEPSIRADTEGGNQRNDVPETF 120

Query: 121 ENREAMIGAVPVFDEPYIRVPKVLNKE 147
           ENREAMIGAVPVFDEPYI+VPKVLNKE
Sbjct: 121 ENREAMIGAVPVFDEPYIKVPKVLNKE 145

[Close]

BLAST of MC11g0633 vs. ExPASy TrEMBL
Match: A0A1S3CQE8 (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Cucumis melo OX=3656 GN=LOC103503618 PE=3 SV=1)

HSP 1 Score: 236 bits (602), Expect = 9.55e-78
Identity = 122/147 (82.99%), Postives = 131/147 (89.12%), Query Frame = 0


Query: 1   MGSKALPLLKGALSLPSLQRQIFIYNGFQFHTLPISSNKIRKCSTTPRIRASLQPPDVPR 60
           MGSKALPLLKGA S PSL+RQIFI   F  H+LP+S+  IRK ST   + ASLQPPDVPR
Sbjct: 1   MGSKALPLLKGASSFPSLKRQIFISTAF--HSLPVSNITIRKSSTASGVLASLQPPDVPR 60

Query: 61  LAETARISLTPTEVEEFAPKIRQVVDWFGQLQTVDLQSIEPSIRADTEGGNQRNDISETF 120
           LA+TARISLTPT+VEEFAPKI QVVDWFGQLQTVDLQSIEPSIRADTEGGNQRND+ ETF
Sbjct: 61  LAQTARISLTPTQVEEFAPKITQVVDWFGQLQTVDLQSIEPSIRADTEGGNQRNDVPETF 120

Query: 121 ENREAMIGAVPVFDEPYIRVPKVLNKE 147
           ENREAMIGAVPVFDEPYI+VPKVLNKE
Sbjct: 121 ENREAMIGAVPVFDEPYIKVPKVLNKE 145

[Close]

BLAST of MC11g0633 vs. ExPASy TrEMBL
Match: A0A6J1FM33 (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111446647 PE=3 SV=1)

HSP 1 Score: 236 bits (601), Expect = 1.36e-77
Identity = 124/147 (84.35%), Postives = 130/147 (88.44%), Query Frame = 0


Query: 1   MGSKALPLLKGALSLPSLQRQIFIYNGFQFHTLPISSNKIRKCSTTPRIRASLQPPDVPR 60
           MGS AL LLKGA SLPSL  QIFI      ++LP+SS +IRKCST P IRASLQPPDVPR
Sbjct: 1   MGSGALRLLKGASSLPSLNPQIFISTSL--NSLPVSSIRIRKCSTAPGIRASLQPPDVPR 60

Query: 61  LAETARISLTPTEVEEFAPKIRQVVDWFGQLQTVDLQSIEPSIRADTEGGNQRNDISETF 120
           LAETARISL P EVEEFAPKIRQVVDWFGQLQ VDLQSIEPSIRADTEGGNQR+D+SETF
Sbjct: 61  LAETARISLNPNEVEEFAPKIRQVVDWFGQLQAVDLQSIEPSIRADTEGGNQRDDVSETF 120

Query: 121 ENREAMIGAVPVFDEPYIRVPKVLNKE 147
           ENREAMIGAVPVFDEPYIRVPKVLNKE
Sbjct: 121 ENREAMIGAVPVFDEPYIRVPKVLNKE 145

[Close]

BLAST of MC11g0633 vs. ExPASy TrEMBL
Match: A0A0A0LJU5 (Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Cucumis sativus OX=3659 GN=GATC PE=3 SV=1)

HSP 1 Score: 232 bits (592), Expect = 3.19e-76
Identity = 121/147 (82.31%), Postives = 129/147 (87.76%), Query Frame = 0


Query: 1   MGSKALPLLKGALSLPSLQRQIFIYNGFQFHTLPISSNKIRKCSTTPRIRASLQPPDVPR 60
           MGSKALPLLKGA S PSL+RQIFI   F  H+LP+S+  IR  ST   I ASLQPPDVPR
Sbjct: 1   MGSKALPLLKGASSFPSLKRQIFISTAF--HSLPVSNISIRNSSTASGISASLQPPDVPR 60

Query: 61  LAETARISLTPTEVEEFAPKIRQVVDWFGQLQTVDLQSIEPSIRADTEGGNQRNDISETF 120
           LA+TARISLTPT+ EEFAPKI QVVDWFGQLQTVDLQSIEPSIRADTEGG+QRNDI ETF
Sbjct: 61  LAQTARISLTPTQAEEFAPKITQVVDWFGQLQTVDLQSIEPSIRADTEGGSQRNDIPETF 120

Query: 121 ENREAMIGAVPVFDEPYIRVPKVLNKE 147
           ENREAMIGAVPVFDEPYI+VPKVLNKE
Sbjct: 121 ENREAMIGAVPVFDEPYIKVPKVLNKE 145

[Close]

BLAST of MC11g0633 vs. TAIR 10
Match: AT4G32915.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of translational fidelity; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glu-tRNAGln amidotransferase, C subunit (InterPro:IPR003837); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 132.9 bits (333), Expect = 2.1e-31
Identity = 60/111 (54.05%), Postives = 87/111 (78.38%), Query Frame = 0


Query: 37  SNKIRKCSTTPRIRASLQPPDVPRLAETARISLTPTEVEEFAPKIRQVVDWFGQLQTVDL 96
           +++I +  ++    + LQPPDV RLA+TARISLTP E+EE   KIR+V+DWFGQLQ VD+
Sbjct: 45  NHRIARSYSSDSDSSVLQPPDVARLAQTARISLTPAEIEECETKIRRVIDWFGQLQQVDV 104

Query: 97  QSIEPSIRADTEGGNQRNDISETFENREAMIGAVPVFDEPYIRVPKVLNKE 148
            S+EP+IRA+ +GGN R D  ETF+NR+++  ++P F++ Y++VPK+LNKE
Sbjct: 105 NSVEPAIRAEMDGGNLREDAPETFDNRDSIRASIPSFEDAYLKVPKILNKE 155

The following BLAST results are available for this feature:

BLAST of MC11g0633 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
D7STK2	4.9e-41	60.54	Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Vi...	[more]
B9RRX2	1.9e-37	59.86	Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Ri...	[more]
B9INH0	1.4e-35	57.43	Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Po...	[more]
A2XK57	3.2e-32	69.07	Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Or...	[more]
Q7XZZ1	3.2e-32	69.07	Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Or...	[more]

BLAST of MC11g0633 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143239.1	6.69e-99	100.00	glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Momo...	[more]
XP_038897282.1	8.38e-79	85.03	glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Beni...	[more]
XP_008466091.1	1.97e-77	82.99	PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochon...	[more]
XP_022941306.1	2.80e-77	84.35	glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Cucu...	[more]
XP_023521629.1	4.64e-76	82.99	glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial [Cucu...	[more]

BLAST of MC11g0633 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQ90	3.24e-99	100.00	Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Mo...	[more]
A0A5A7T6R5	9.55e-78	82.99	Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Cu...	[more]
A0A1S3CQE8	9.55e-78	82.99	Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Cu...	[more]
A0A6J1FM33	1.36e-77	84.35	Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Cu...	[more]
A0A0A0LJU5	3.19e-76	82.31	Glutamyl-tRNA(Gln) amidotransferase subunit C, chloroplastic/mitochondrial OS=Cu...	[more]

BLAST of MC11g0633 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G32915.1	2.1e-31	54.05	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of translation...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.20.60		coord: 55..95 e-value: 8.7E-8 score: 34.1
IPR003837	Glu-tRNAGln amidotransferase C subunit	TIGRFAM	TIGR00135	TIGR00135	coord: 57..144 e-value: 1.8E-14 score: 51.8
IPR003837	Glu-tRNAGln amidotransferase C subunit	PFAM	PF02686	Glu-tRNAGln	coord: 69..140 e-value: 6.2E-9 score: 36.0
IPR003837	Glu-tRNAGln amidotransferase C subunit	PANTHER	PTHR15004	UNCHARACTERIZED	coord: 23..147
IPR003837	Glu-tRNAGln amidotransferase C subunit	HAMAP	MF_00122	GatC	coord: 52..145 score: 18.193779
IPR036113	Glu-tRNAGln amidotransferase superfamily, subunit C	SUPERFAMILY	141000	Glu-tRNAGln amidotransferase C subunit	coord: 53..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g0633.1	MC11g0633.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070681	glutaminyl-tRNAGln biosynthesis via transamidation
biological_process	GO:0032543	mitochondrial translation
biological_process	GO:0006450	regulation of translational fidelity
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0030956	glutamyl-tRNA(Gln) amidotransferase complex
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0050567	glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
molecular_function	GO:0016740	transferase activity