MC11g0527 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0527
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	serine/arginine-rich splicing factor RSZ22-like
Location	MC11: 4082515 .. 4085474 (+)
RNA-Seq Expression	MC11g0527
Synteny	MC11g0527

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAACTTTTCAAGTAGATATGACATAATTATATAAATTAATTAATAAAATTCGATACACGTTTTTAAGTTGCAAGTATTTTGTCGGATGTCCCCGACCCCGAAGGGACAAGTTCCGGATAAAAATACTATTGAATGAAAAAAAAAATTCCAAGTAAAAATTGATTTTTGCTTAGAAAAAGATAAAAGAAAAAAAAGCCCACGAACGGGAGGTTAAATATTAGAATACGTCGAAATTTTGGGGTAATCTATTAATTTCAATATTTGCAAGGAGTCCGACCTAAATTTGCCGGATATATAATTCAATCCGTAGTACGCGAAAACCAAAATATCTGAAGCTTGGAGAGAGAAACCCGTCGGGCTGCTAGGGTTTTTACGGTGCCTGCATCGTCGGCTCCGATCTGTTCGTATGTCTTCTCGAATTCGTTTTCTTTTGGATTTTCATGCTTTCTTCCTGAATTCTCACCTTGAAAGATTATTTATCAAGCCTCCGGTCATATTCCGCATGTTGGATTGTTAACCCTAAGGCCAATGCTCGATTTTCTGTAATTTAGTCCGAGGATGAACATTTCGTAGAACTTCTGTTCGATTTGTATGTTTTTAGTTATAGGATTTTTAGGAGTATAATATGCGAATTGTTGTATTGTATTGTATTTTTGTTCATGAATGGGCGACACGACGTTCCTGTTCGTGCGCTTATTTTTCGGTAACTTGGCTGATTCTTTATGGGATTGACAGGTTTATCGAAAAAAGATGTCTCGCGTGTATGTTGGGAACTTGGATCCAAGGGTTTCTGAGCGCGAGCTTGAAGATGAATTTCGTGTTTTTGGAGTTATTCGAAGGTGCGGTATATTTAACTTCATGCCTCATGAGCTACCTTTTTAAAAAAAAAAAAAAATTGCTTCGCGCACTCTGTCTCTGTTGGGTTCTGAAGTGGATTGCAAACTCATTCAATTTATGTTTAATCCCGTCTGCCAGGGGATATACTACTTATTAGCCGGTTAAATTGTTGAAATGTACCCCAGGTTCATAGCAATATGTACAAATTCAAACACTTCATTCTTGATATAAATTCTTACCAGCCACACTGCTAGGCTTGGCGCACCATTAACATTATGATTTCAAGAATTTCCAACTTTTAATCGTCAAATTTACTGATTTATCTGTTTACTACCAACTTTTTTGCCTTGGCCATGCATTTAGATGAAATTAGATCACAAGAATTCTCATTGATAACTCTTGAGAGATTTGTGTTGACACCATGGTCCTACAATGCAAGCTACTAATATTCATGGATTGGTTAGTCACCTAGAGTTAAAACTTTGACTTCCATTTTTTATTCCAGGTTACTCTTGGACATGATTTCCTTCATTATATCTGCTTTTTGGTTGCAAAACACTTAAGATTAGGAATTAATACTCCTGTATTTGAATTTTGACTGAGTGGTCACGGTCTCATTATTGTGACTGAGTGGTCACGGTCTCATGGATTCTTAACCGCATGGCACTCTGGTCATCTATAGGGATATTTGATTTTCCCACCATTTTATGCAACCAAATGTTATATGGTTTGCTGACACTCCCAGACGTGCAATCTGATGATCTTTGAGGACTGAGCAGTTCATAGGGAAAAGGAAAGCCTACCGTCTGGGTGTTAGACTGACTCATACATATTTTGTTTATTTTAATCATTTGGTTTTTCAATTTTTGAATGTTGTGTTTCAGTGTATGGGTTGCACGAAGGCCCCCAGGTTATGCCTTCATAGATTTTGATGACCCCAGAGATGCAAGGGATGCAATCCATGAATTAGATGGTATGTGTGGGCTTTTTTTGCTTTTTATATTGCTTTTGTTTTTTATTGGTGAAAGGTTCTGTATTTGGATGCAGTTTTCATTGTTTTAACTTTTAGTCGTTGGTGCATTTTTTCATACATATCTCTTGGCCTTAACAATGATATTTAATAATGCTTTTGTGTAGAGCTTCTTAGTATCTGATTCTTTATGTGCATCTTGAATAATTAAACTAAGTTTAAGCCCATAATACCTTTTCACCTTCACACAAACCATCTTGTCCTCTATTATTGGTTTATTCATTGATGCAATGCAATTTTATATGCAACAATTTTTTCATCTTTAATATTTTATTAGGCACCCCTTTTACTTGCTATTTACACTGAGTTGAATCTCCTATGGCTTTCCTGATCATTTTTCCTTCAGCCTATTGAATATAATCAAGTTTTCATCCTGTCATGTGTTGATGGTTTGTTCTTTGCCTTTTTGATATTTGTGTTTGAACTTGTTTAGCAATGCCTTACTATATTCACTTGTTGACTGACAGTTCATGTCAATCAAACTATTCTTTACATGCATTGTCACTCAACTATTGTCATGTTTTAGCATTTATGGTTTATAGCAGTTCGTACATAATAAGAATAGTAAATTCTGAATCAGGAAAGAATGGCTGGAGAGTTGAGCTTTCTCACAATTCTAGAGGTGGGGGCGGTGGCCGTGGCGGAGGGGGTCGTGGTCGTTCTGGTGGTTCTGATTTGAAATGCTACGAGTGTGGTGAGCCTGGGCATTTTGCTCGTGAATGTCGTTTACGTGGCGGCGGCGGCGGCGGCGGTGGTGGTGCAGGAAGAAGACGTAGCCGCAGTCCTCGATACCGTCGGAGTCCAAGTTATGGTCGCAGGTCAGAACATTGAGATTGAATGTTGCATTTATATTTAGTATATATTTGGTTTATAATTTGTCACATTTGTTTTTACTCCCAGTTGTCTGCATTTGGATTTCTTGATCCCCTTTGGTATTATATATGCTCTGGGGTTTTGACATCATTAGTCTCTTTATAGGAGTTATAGTCCCCGTGGAAGATCCCCAAGACGCCGCAGCTTGTCACCTCGTGGGCGTAGCTATAGCAGATCTCCTCCATACCGTGGAAGAGAGGAGCTGCCTTATGCCAATGGG

mRNA sequence

TAACTTTTCAAGTAGATATGACATAATTATATAAATTAATTAATAAAATTCGATACACGTTTTTAAGTTGCAAGTATTTTGTCGGATGTCCCCGACCCCGAAGGGACAAGTTCCGGATAAAAATACTATTGAATGAAAAAAAAAATTCCAAGTAAAAATTGATTTTTGCTTAGAAAAAGATAAAAGAAAAAAAAGCCCACGAACGGGAGGTTAAATATTAGAATACGTCGAAATTTTGGGGTAATCTATTAATTTCAATATTTGCAAGGAGTCCGACCTAAATTTGCCGGATATATAATTCAATCCGTAGTACGCGAAAACCAAAATATCTGAAGCTTGGAGAGAGAAACCCGTCGGGCTGCTAGGGTTTTTACGGTGCCTGCATCGTCGGCTCCGATCTGTTCGTTTATCGAAAAAAGATGTCTCGCGTGTATGTTGGGAACTTGGATCCAAGGGTTTCTGAGCGCGAGCTTGAAGATGAATTTCGTGTTTTTGGAGTTATTCGAAGTGTATGGGTTGCACGAAGGCCCCCAGGTTATGCCTTCATAGATTTTGATGACCCCAGAGATGCAAGGGATGCAATCCATGAATTAGATGGAAAGAATGGCTGGAGAGTTGAGCTTTCTCACAATTCTAGAGGTGGGGGCGGTGGCCGTGGCGGAGGGGGTCGTGGTCGTTCTGGTGGTTCTGATTTGAAATGCTACGAGTGTGGTGAGCCTGGGCATTTTGCTCGTGAATGTCGTTTACGTGGCGGCGGCGGCGGCGGCGGTGGTGGTGCAGGAAGAAGACGTAGCCGCAGTCCTCGATACCGTCGGAGTCCAAGTTATGGTCGCAGGAGTTATAGTCCCCGTGGAAGATCCCCAAGACGCCGCAGCTTGTCACCTCGTGGGCGTAGCTATAGCAGATCTCCTCCATACCGTGGAAGAGAGGAGCTGCCTTATGCCAATGGG

Coding sequence (CDS)

ATGTCTCGCGTGTATGTTGGGAACTTGGATCCAAGGGTTTCTGAGCGCGAGCTTGAAGATGAATTTCGTGTTTTTGGAGTTATTCGAAGTGTATGGGTTGCACGAAGGCCCCCAGGTTATGCCTTCATAGATTTTGATGACCCCAGAGATGCAAGGGATGCAATCCATGAATTAGATGGAAAGAATGGCTGGAGAGTTGAGCTTTCTCACAATTCTAGAGGTGGGGGCGGTGGCCGTGGCGGAGGGGGTCGTGGTCGTTCTGGTGGTTCTGATTTGAAATGCTACGAGTGTGGTGAGCCTGGGCATTTTGCTCGTGAATGTCGTTTACGTGGCGGCGGCGGCGGCGGCGGTGGTGGTGCAGGAAGAAGACGTAGCCGCAGTCCTCGATACCGTCGGAGTCCAAGTTATGGTCGCAGGAGTTATAGTCCCCGTGGAAGATCCCCAAGACGCCGCAGCTTGTCACCTCGTGGGCGTAGCTATAGCAGATCTCCTCCATACCGTGGAAGAGAGGAGCTGCCTTATGCCAATGGG

Protein sequence

MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDGKNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREELPYANG

Homology

[Close]

BLAST of MC11g0527 vs. ExPASy Swiss-Prot
Match: O81126 (Serine/arginine-rich splicing factor RSZ22 OS=Arabidopsis thaliana OX=3702 GN=RSZ22 PE=1 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.1e-68
Identity = 150/196 (76.53%), Postives = 156/196 (79.59%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRV+ERELEDEFR FGV+RSVWVARRPPGYAF+DF+DPRDARDAI  LDG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALDG 60

Query: 61  KNGWRVELSHN--SRGGGG-----GRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGG 120
           KNGWRVE SHN   RGGGG     G GGGGRG  GGSDLKCYECGE GHFARECR R   
Sbjct: 61  KNGWRVEQSHNRGERGGGGRGGDRGGGGGGRGGRGGSDLKCYECGETGHFARECRNR--- 120

Query: 121 GGGGGGAGRRRSRS-----PRYRRSPSYGRRSYSPRGRS---PRRRSLSP---RGRSYSR 178
               GG GRRRS+S     PRYRRSPSYGRRSYSPR RS   PRRRS SP   RGRSYSR
Sbjct: 121 ----GGTGRRRSKSRSRTPPRYRRSPSYGRRSYSPRARSPPPPRRRSPSPPPARGRSYSR 180

[Close]

BLAST of MC11g0527 vs. ExPASy Swiss-Prot
Match: Q9SJA6 (Serine/arginine-rich splicing factor RSZ22A OS=Arabidopsis thaliana OX=3702 GN=RSZ22A PE=1 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 3.3e-68
Identity = 150/193 (77.72%), Postives = 159/193 (82.38%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRV+ERELEDEFR FGVIRSVWVARRPPGYAF+DF+D RDARDAI E+DG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRSFGVIRSVWVARRPPGYAFLDFEDSRDARDAIREVDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGG------GGRGRSGGSDLKCYECGEPGHFARECRLRGGGG 120
           KNGWRVE SHN RGGGGGRGG      GGRGR GGSDLKCYECGE GHFARECR RGG G
Sbjct: 61  KNGWRVEQSHN-RGGGGGRGGGRGGGDGGRGR-GGSDLKCYECGESGHFARECRSRGGSG 120

Query: 121 GGGGGAGRRRSRS-----PRYRRSPSY-GRRSYSPRGRS---PRRRSLSPRGRSYSRS-P 178
                 GRRRSRS     PRYR+SP+Y GRRSYSPR RS   PRRRS SPRGR+YSRS P
Sbjct: 121 ------GRRRSRSRSRSPPRYRKSPTYGGRRSYSPRARSPPPPRRRSPSPRGRNYSRSPP 180

[Close]

BLAST of MC11g0527 vs. ExPASy Swiss-Prot
Match: Q69KL9 (Serine/arginine-rich splicing factor RSZ21A OS=Oryza sativa subsp. japonica OX=39947 GN=RSZ21A PE=2 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 2.7e-62
Identity = 136/184 (73.91%), Postives = 148/184 (80.43%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           M+RVYVGNLDPRV+ RELEDEFRVFGV+RSVWVAR+PPG+AFIDFDD RDA+DAI ++DG
Sbjct: 1   MARVYVGNLDPRVTARELEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAQDAIRDIDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGG- 120
           KNGWRVELS N+       G GGR R G S+ KCYECGE GHFARECRLR G GG G G 
Sbjct: 61  KNGWRVELSRNA-----SSGRGGRDRYGSSESKCYECGETGHFARECRLRIGSGGLGSGR 120

Query: 121 ---AGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSP-RGRSYSRSPPY-RGREELP- 178
                R RSRSPRYRRSPSYGRRSYSP GRSPRRRS+SP R RSYSRSP Y RGR+E P 
Sbjct: 121 RRSRSRSRSRSPRYRRSPSYGRRSYSPAGRSPRRRSVSPARARSYSRSPQYNRGRDESPA 179

[Close]

BLAST of MC11g0527 vs. ExPASy Swiss-Prot
Match: Q6K4N0 (Serine/arginine-rich splicing factor RSZ21 OS=Oryza sativa subsp. japonica OX=39947 GN=RSZP21 PE=2 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 6.7e-61
Identity = 131/182 (71.98%), Postives = 146/182 (80.22%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           M+R+YVGNLDPRV+  ELEDEFRVFGV+RSVWVAR+PPG+AFIDFDD RDA DA+ +LDG
Sbjct: 1   MARLYVGNLDPRVTSGELEDEFRVFGVLRSVWVARKPPGFAFIDFDDKRDAEDALRDLDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGG- 120
           KNGWRVELS NS         GGR R GGS++KCYECGE GHFARECRLR G GG G G 
Sbjct: 61  KNGWRVELSRNS------SSRGGRDRHGGSEMKCYECGETGHFARECRLRIGPGGLGSGK 120

Query: 121 ---AGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSP-RGRSYSRSPPYRGREELPYA 178
                R RSRSP+YR+SP+YGRRSYSPR RSPRRRS+SP RGRSYSRSP  RGR   PYA
Sbjct: 121 RRSRSRSRSRSPQYRKSPTYGRRSYSPRDRSPRRRSVSPVRGRSYSRSP--RGRGGSPYA 174

[Close]

BLAST of MC11g0527 vs. ExPASy Swiss-Prot
Match: Q6K9C3 (Serine/arginine-rich splicing factor RSZ23 OS=Oryza sativa subsp. japonica OX=39947 GN=RSZ23 PE=2 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 2.0e-57
Identity = 135/207 (65.22%), Postives = 145/207 (70.05%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           M+RVYVGNLDPRV+ RE+EDEFRVFGV+RSVWVAR+PPG+AFIDFDD RDA DAI +LDG
Sbjct: 1   MARVYVGNLDPRVTAREIEDEFRVFGVLRSVWVARKPPGFAFIDFDDRRDAEDAIRDLDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGG- 120
           KNGWRVELS  +   G GR   GR RSGGSD+KCYECGEPGHFARECRLR G GG G G 
Sbjct: 61  KNGWRVELSTKA---GSGR---GRDRSGGSDMKCYECGEPGHFARECRLRIGSGGLGSGR 120

Query: 121 ------------AGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLS-----PRGRSYSR 177
                        GR RSRSPRYRRSPSYGR   SPR RSP+RRS S      R RSYSR
Sbjct: 121 RRSRSRSRSPRYRGRSRSRSPRYRRSPSYGR---SPRDRSPKRRSYSRSPPPARARSYSR 180

[Close]

BLAST of MC11g0527 vs. NCBI nr
Match: XP_022133130.1 (serine/arginine-rich splicing factor RSZ22-like [Momordica charantia])

HSP 1 Score: 350 bits (899), Expect = 1.55e-121
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG
Sbjct: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGA 120
           KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGA
Sbjct: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGA 120

Query: 121 GRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREELPYANG 177
           GRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREELPYANG
Sbjct: 121 GRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREELPYANG 177

[Close]

BLAST of MC11g0527 vs. NCBI nr
Match: XP_004136307.1 (serine/arginine-rich splicing factor RSZ22 [Cucumis sativus] >XP_011652534.1 serine/arginine-rich splicing factor RSZ22 [Cucumis sativus] >XP_011652535.1 serine/arginine-rich splicing factor RSZ22 [Cucumis sativus] >KGN60178.1 hypothetical protein Csa_001673 [Cucumis sativus])

HSP 1 Score: 341 bits (875), Expect = 8.12e-118
Identity = 174/181 (96.13%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG
Sbjct: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGG- 120
           KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGG 
Sbjct: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGG 120

Query: 121 ---AGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREELPYAN 177
              AGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRS+SPRGRS+SRSPPYRGREE+PYAN
Sbjct: 121 GGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSVSPRGRSFSRSPPYRGREEIPYAN 180

[Close]

BLAST of MC11g0527 vs. NCBI nr
Match: XP_008466294.1 (PREDICTED: serine/arginine-rich splicing factor RSZ22A [Cucumis melo])

HSP 1 Score: 341 bits (874), Expect = 9.34e-118
Identity = 174/177 (98.31%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG
Sbjct: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGA 120
           KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGG  A
Sbjct: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGG--A 120

Query: 121 GRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREELPYANG 177
           GRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRS+SRSPPYRGREELPYANG
Sbjct: 121 GRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSFSRSPPYRGREELPYANG 175

[Close]

BLAST of MC11g0527 vs. NCBI nr
Match: TYK31362.1 (serine/arginine-rich splicing factor RSZ22A-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 339 bits (869), Expect = 1.78e-116
Identity = 173/177 (97.74%), Postives = 174/177 (98.31%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG
Sbjct: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGA 120
           KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGG  A
Sbjct: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGG--A 120

Query: 121 GRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREELPYANG 177
           GRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSP GRS+SRSPPYRGREELPYANG
Sbjct: 121 GRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPHGRSFSRSPPYRGREELPYANG 175

[Close]

BLAST of MC11g0527 vs. NCBI nr
Match: KAG7037569.1 (Serine/arginine-rich splicing factor RSZ21A [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 337 bits (863), Expect = 3.35e-116
Identity = 173/178 (97.19%), Postives = 174/178 (97.75%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG
Sbjct: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGG- 120
           KNGWRVELSHNSRGGGGG  GGGRGRSGGSDLKCYECGEPGHFARECR RGGGGGGGGG 
Sbjct: 61  KNGWRVELSHNSRGGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRSRGGGGGGGGGG 120

Query: 121 AGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREELPYANG 177
           AGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREE+PYANG
Sbjct: 121 AGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREEVPYANG 178

[Close]

BLAST of MC11g0527 vs. ExPASy TrEMBL
Match: A0A6J1BUF4 (serine/arginine-rich splicing factor RSZ22-like OS=Momordica charantia OX=3673 GN=LOC111005801 PE=4 SV=1)

HSP 1 Score: 350 bits (899), Expect = 7.48e-122
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG
Sbjct: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGA 120
           KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGA
Sbjct: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGA 120

Query: 121 GRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREELPYANG 177
           GRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREELPYANG
Sbjct: 121 GRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREELPYANG 177

[Close]

BLAST of MC11g0527 vs. ExPASy TrEMBL
Match: A0A0A0LEI3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881900 PE=4 SV=1)

HSP 1 Score: 341 bits (875), Expect = 3.93e-118
Identity = 174/181 (96.13%), Postives = 177/181 (97.79%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG
Sbjct: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGG- 120
           KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGG 
Sbjct: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGG 120

Query: 121 ---AGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREELPYAN 177
              AGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRS+SPRGRS+SRSPPYRGREE+PYAN
Sbjct: 121 GGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSVSPRGRSFSRSPPYRGREEIPYAN 180

[Close]

BLAST of MC11g0527 vs. ExPASy TrEMBL
Match: A0A1S3CQW5 (serine/arginine-rich splicing factor RSZ22A OS=Cucumis melo OX=3656 GN=LOC103503748 PE=4 SV=1)

HSP 1 Score: 341 bits (874), Expect = 4.52e-118
Identity = 174/177 (98.31%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG
Sbjct: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGA 120
           KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGG  A
Sbjct: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGG--A 120

Query: 121 GRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREELPYANG 177
           GRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRS+SRSPPYRGREELPYANG
Sbjct: 121 GRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSFSRSPPYRGREELPYANG 175

[Close]

BLAST of MC11g0527 vs. ExPASy TrEMBL
Match: A0A5D3E624 (Serine/arginine-rich splicing factor RSZ22A-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G006670 PE=4 SV=1)

HSP 1 Score: 339 bits (869), Expect = 8.63e-117
Identity = 173/177 (97.74%), Postives = 174/177 (98.31%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG
Sbjct: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGA 120
           KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGG  A
Sbjct: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGG--A 120

Query: 121 GRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREELPYANG 177
           GRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSP GRS+SRSPPYRGREELPYANG
Sbjct: 121 GRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPHGRSFSRSPPYRGREELPYANG 175

[Close]

BLAST of MC11g0527 vs. ExPASy TrEMBL
Match: A0A6J1FS77 (serine/arginine-rich splicing factor RSZ22-like OS=Cucurbita moschata OX=3662 GN=LOC111446389 PE=4 SV=1)

HSP 1 Score: 337 bits (863), Expect = 2.39e-116
Identity = 173/178 (97.19%), Postives = 174/178 (97.75%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG
Sbjct: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGG- 120
           KNGWRVELSHNSRGGGGG  GGGRGRSGGSDLKCYECGEPGHFARECR RGGGGGGGGG 
Sbjct: 61  KNGWRVELSHNSRGGGGGGRGGGRGRSGGSDLKCYECGEPGHFARECRSRGGGGGGGGGG 120

Query: 121 AGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREELPYANG 177
           AGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREE+PYANG
Sbjct: 121 AGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSYSRSPPYRGREEVPYANG 178

[Close]

BLAST of MC11g0527 vs. TAIR 10
Match: AT4G31580.1 (serine/arginine-rich 22 )

HSP 1 Score: 260.8 bits (665), Expect = 8.1e-70
Identity = 150/196 (76.53%), Postives = 156/196 (79.59%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRV+ERELEDEFR FGV+RSVWVARRPPGYAF+DF+DPRDARDAI  LDG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALDG 60

Query: 61  KNGWRVELSHN--SRGGGG-----GRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGG 120
           KNGWRVE SHN   RGGGG     G GGGGRG  GGSDLKCYECGE GHFARECR R   
Sbjct: 61  KNGWRVEQSHNRGERGGGGRGGDRGGGGGGRGGRGGSDLKCYECGETGHFARECRNR--- 120

Query: 121 GGGGGGAGRRRSRS-----PRYRRSPSYGRRSYSPRGRS---PRRRSLSP---RGRSYSR 178
               GG GRRRS+S     PRYRRSPSYGRRSYSPR RS   PRRRS SP   RGRSYSR
Sbjct: 121 ----GGTGRRRSKSRSRTPPRYRRSPSYGRRSYSPRARSPPPPRRRSPSPPPARGRSYSR 180

[Close]

BLAST of MC11g0527 vs. TAIR 10
Match: AT4G31580.2 (serine/arginine-rich 22 )

HSP 1 Score: 260.8 bits (665), Expect = 8.1e-70
Identity = 150/196 (76.53%), Postives = 156/196 (79.59%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRV+ERELEDEFR FGV+RSVWVARRPPGYAF+DF+DPRDARDAI  LDG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRAFGVVRSVWVARRPPGYAFLDFEDPRDARDAIRALDG 60

Query: 61  KNGWRVELSHN--SRGGGG-----GRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGG 120
           KNGWRVE SHN   RGGGG     G GGGGRG  GGSDLKCYECGE GHFARECR R   
Sbjct: 61  KNGWRVEQSHNRGERGGGGRGGDRGGGGGGRGGRGGSDLKCYECGETGHFARECRNR--- 120

Query: 121 GGGGGGAGRRRSRS-----PRYRRSPSYGRRSYSPRGRS---PRRRSLSP---RGRSYSR 178
               GG GRRRS+S     PRYRRSPSYGRRSYSPR RS   PRRRS SP   RGRSYSR
Sbjct: 121 ----GGTGRRRSKSRSRTPPRYRRSPSYGRRSYSPRARSPPPPRRRSPSPPPARGRSYSR 180

[Close]

BLAST of MC11g0527 vs. TAIR 10
Match: AT2G24590.1 (RNA recognition motif and CCHC-type zinc finger domains containing protein )

HSP 1 Score: 259.2 bits (661), Expect = 2.4e-69
Identity = 150/193 (77.72%), Postives = 159/193 (82.38%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           MSRVYVGNLDPRV+ERELEDEFR FGVIRSVWVARRPPGYAF+DF+D RDARDAI E+DG
Sbjct: 1   MSRVYVGNLDPRVTERELEDEFRSFGVIRSVWVARRPPGYAFLDFEDSRDARDAIREVDG 60

Query: 61  KNGWRVELSHNSRGGGGGRGG------GGRGRSGGSDLKCYECGEPGHFARECRLRGGGG 120
           KNGWRVE SHN RGGGGGRGG      GGRGR GGSDLKCYECGE GHFARECR RGG G
Sbjct: 61  KNGWRVEQSHN-RGGGGGRGGGRGGGDGGRGR-GGSDLKCYECGESGHFARECRSRGGSG 120

Query: 121 GGGGGAGRRRSRS-----PRYRRSPSY-GRRSYSPRGRS---PRRRSLSPRGRSYSRS-P 178
                 GRRRSRS     PRYR+SP+Y GRRSYSPR RS   PRRRS SPRGR+YSRS P
Sbjct: 121 ------GRRRSRSRSRSPPRYRKSPTYGGRRSYSPRARSPPPPRRRSPSPRGRNYSRSPP 180

[Close]

BLAST of MC11g0527 vs. TAIR 10
Match: AT1G23860.1 (RS-containing zinc finger protein 21 )

HSP 1 Score: 215.7 bits (548), Expect = 3.0e-56
Identity = 129/196 (65.82%), Postives = 140/196 (71.43%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           M+RVYVGNLDPRV+ERELEDEF+ FGV+R+VWVARRPPGYAF++FDD RDA DAI  LD 
Sbjct: 1   MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGA 120
           KNGWRVELSH  +   GGRGGGG  R G  D KCYECGE GHFARECR        G G+
Sbjct: 61  KNGWRVELSHKDK---GGRGGGGGRRGGIEDSKCYECGELGHFARECR-------RGRGS 120

Query: 121 GRRRSRSPRYRRSPSYG--RRSYSPRGR--SPRRRSLSP--RGRSYSRSPPYRGR----- 178
            RRRS SPR RRSP YG  RRS SPRGR   PRRRS++P  RGRSYSRSPPYRG      
Sbjct: 121 VRRRSPSPRRRRSPDYGYARRSISPRGRRSPPRRRSVTPPRRGRSYSRSPPYRGSRRDSP 180

[Close]

BLAST of MC11g0527 vs. TAIR 10
Match: AT1G23860.2 (RS-containing zinc finger protein 21 )

HSP 1 Score: 215.7 bits (548), Expect = 3.0e-56
Identity = 129/196 (65.82%), Postives = 140/196 (71.43%), Query Frame = 0


Query: 1   MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFIDFDDPRDARDAIHELDG 60
           M+RVYVGNLDPRV+ERELEDEF+ FGV+R+VWVARRPPGYAF++FDD RDA DAI  LD 
Sbjct: 1   MTRVYVGNLDPRVTERELEDEFKAFGVLRNVWVARRPPGYAFLEFDDERDALDAISALDR 60

Query: 61  KNGWRVELSHNSRGGGGGRGGGGRGRSGGSDLKCYECGEPGHFARECRLRGGGGGGGGGA 120
           KNGWRVELSH  +   GGRGGGG  R G  D KCYECGE GHFARECR        G G+
Sbjct: 61  KNGWRVELSHKDK---GGRGGGGGRRGGIEDSKCYECGELGHFARECR-------RGRGS 120

Query: 121 GRRRSRSPRYRRSPSYG--RRSYSPRGR--SPRRRSLSP--RGRSYSRSPPYRGR----- 178
            RRRS SPR RRSP YG  RRS SPRGR   PRRRS++P  RGRSYSRSPPYRG      
Sbjct: 121 VRRRSPSPRRRRSPDYGYARRSISPRGRRSPPRRRSVTPPRRGRSYSRSPPYRGSRRDSP 180

The following BLAST results are available for this feature:

BLAST of MC11g0527 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O81126	1.1e-68	76.53	Serine/arginine-rich splicing factor RSZ22 OS=Arabidopsis thaliana OX=3702 GN=RS...	[more]
Q9SJA6	3.3e-68	77.72	Serine/arginine-rich splicing factor RSZ22A OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q69KL9	2.7e-62	73.91	Serine/arginine-rich splicing factor RSZ21A OS=Oryza sativa subsp. japonica OX=3...	[more]
Q6K4N0	6.7e-61	71.98	Serine/arginine-rich splicing factor RSZ21 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q6K9C3	2.0e-57	65.22	Serine/arginine-rich splicing factor RSZ23 OS=Oryza sativa subsp. japonica OX=39...	[more]

BLAST of MC11g0527 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133130.1	1.55e-121	100.00	serine/arginine-rich splicing factor RSZ22-like [Momordica charantia]	[more]
XP_004136307.1	8.12e-118	96.13	serine/arginine-rich splicing factor RSZ22 [Cucumis sativus] >XP_011652534.1 ser...	[more]
XP_008466294.1	9.34e-118	98.31	PREDICTED: serine/arginine-rich splicing factor RSZ22A [Cucumis melo]	[more]
TYK31362.1	1.78e-116	97.74	serine/arginine-rich splicing factor RSZ22A-like isoform X1 [Cucumis melo var. m...	[more]
KAG7037569.1	3.35e-116	97.19	Serine/arginine-rich splicing factor RSZ21A [Cucurbita argyrosperma subsp. argyr...	[more]

BLAST of MC11g0527 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BUF4	7.48e-122	100.00	serine/arginine-rich splicing factor RSZ22-like OS=Momordica charantia OX=3673 G...	[more]
A0A0A0LEI3	3.93e-118	96.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G881900 PE=4 SV=1	[more]
A0A1S3CQW5	4.52e-118	98.31	serine/arginine-rich splicing factor RSZ22A OS=Cucumis melo OX=3656 GN=LOC103503...	[more]
A0A5D3E624	8.63e-117	97.74	Serine/arginine-rich splicing factor RSZ22A-like isoform X1 OS=Cucumis melo var....	[more]
A0A6J1FS77	2.39e-116	97.19	serine/arginine-rich splicing factor RSZ22-like OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of MC11g0527 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G31580.1	8.1e-70	76.53	serine/arginine-rich 22	[more]
AT4G31580.2	8.1e-70	76.53	serine/arginine-rich 22	[more]
AT2G24590.1	2.4e-69	77.72	RNA recognition motif and CCHC-type zinc finger domains containing protein	[more]
AT1G23860.1	3.0e-56	65.82	RS-containing zinc finger protein 21	[more]
AT1G23860.2	3.0e-56	65.82	RS-containing zinc finger protein 21	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 3..69 e-value: 9.2E-18 score: 75.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 4..61 e-value: 5.9E-16 score: 58.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 2..73 score: 16.107859
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 93..109 e-value: 7.9E-5 score: 32.0
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 93..108 e-value: 6.8E-8 score: 32.3
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 93..108 score: 10.971343
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..73 e-value: 8.4E-20 score: 72.8
None	No IPR available	GENE3D	4.10.60.10		coord: 82..156 e-value: 1.0E-7 score: 33.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..92
None	No IPR available	PANTHER	PTHR23147	SERINE/ARGININE RICH SPLICING FACTOR	coord: 2..176
None	No IPR available	PANTHER	PTHR23147:SF184	SERINE/ARGININE-RICH SPLICING FACTOR RSZ22A-LIKE ISOFORM X1	coord: 2..176
None	No IPR available	CDD	cd12373	RRM_SRSF3_like	coord: 3..71 e-value: 7.2162E-35 score: 115.41
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 86..109
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g0527.1	MC11g0527.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0016607	nuclear speck
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding