MC11g0405 (gene) Bitter gourd (Dali-11) v1

BLAST of MC11g0405 vs. ExPASy Swiss-Prot
Match: Q9LK40 (DNA-directed RNA polymerases IV and V subunit 2 OS=Arabidopsis thaliana OX=3702 GN=NRPD2 PE=1 SV=1)

HSP 1 Score: 1673.3 bits (4332), Expect = 0.0e+00
Identity = 816/1193 (68.40%), Postives = 971/1193 (81.39%), Query Frame = 0

Query: 22   PGTDMDTDDDDYSEA----VNIREIGEGFLKDFCKKASMAFFNEYGLISHQINSYNDFIE 81
            P  D+D  D +  EA    +N+ E+GEGFL+ FCKKA+ +FF++YGLISHQ+NSYN FIE
Sbjct: 2    PDMDIDVKDLEEFEATTGEINLSELGEGFLQSFCKKAATSFFDKYGLISHQLNSYNYFIE 61

Query: 82   SGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLP 141
             GLQ  F  FGE++V+P +D  KK D +WRYA+VKFG+VT++KP F+   +  KE   LP
Sbjct: 62   HGLQNVFQSFGEMLVEPSFDVVKKKDNDWRYATVKFGEVTVEKPTFF---SDDKELEFLP 121

Query: 142  RHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNREIFIGRLPV 201
             HARLQNMTYS+R+K+N+ VEV+   +V+SDKFKTG+D YV+K +L    ++I IG +PV
Sbjct: 122  WHARLQNMTYSARIKVNVQVEVFKNTVVKSDKFKTGQDNYVEKKILDVKKQDILIGSIPV 181

Query: 202  MVNSDLCWMKEE-----QKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTV 261
            MV S LC   E+     +K DC FD GGYF+IKGAEK+FIAQEQ+C +RLWISN   WTV
Sbjct: 182  MVKSILCKTSEKGKENCKKGDCAFDQGGYFVIKGAEKVFIAQEQMCTKRLWISN-SPWTV 241

Query: 262  AYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDKEVVDL 321
            ++RSE KRNR I+RL EN K+E+ K +EKVL VYFLSTEIPVW+LFFALGVSSDKE +DL
Sbjct: 242  SFRSENKRNRFIVRLSENEKAEDYKRREKVLTVYFLSTEIPVWLLFFALGVSSDKEAMDL 301

Query: 322  IDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKKALNYLDNEIKKTSFPPTEKIEDCLN 381
            I +  DD ++ N L AS+     D   + FR G  AL Y++ +IK T FPP E +++CL+
Sbjct: 302  IAFDGDDASITNSLIASIHVA--DAVCEAFRCGNNALTYVEQQIKSTKFPPAESVDECLH 361

Query: 382  LYLFASLKGLKQKCRFLGYMVKCILQAYTGRRKSDNRDDFRNKRFELAGELLEREIKVHI 441
            LYLF  L+ LK+K RFLGYMVKC+L +Y G+RK +NRD FRNKR ELAGELLEREI+VH+
Sbjct: 362  LYLFPGLQSLKKKARFLGYMVKCLLNSYAGKRKCENRDSFRNKRIELAGELLEREIRVHL 421

Query: 442  AHARRRMEKALQRDLYGDREVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVV 501
            AHARR+M +A+Q+ L GD +++PIEHYLDAS+ITNGLSRAFSTGAW+HPF++MER+SGVV
Sbjct: 422  AHARRKMTRAMQKHLSGDGDLKPIEHYLDASVITNGLSRAFSTGAWSHPFRKMERVSGVV 481

Query: 502  ATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMS 561
            A LGRANPLQT+ +LRRTRQQV YTGKVGDARYPHPSHWGRVCFLSTPDGENCGL+KNMS
Sbjct: 482  ANLGRANPLQTLIDLRRTRQQVLYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNMS 541

Query: 562  ITGLVSLNTLKPIVPTLFRCGMENLVDDTFTPLSGSYKIFLNGEWVGICADSVSFVTKLR 621
            + GLVS  +L+ +V  LF CGME L+DDT TPL G +K+ LNG+WVG+CADS SFV +L+
Sbjct: 542  LLGLVSTQSLESVVEKLFACGMEELMDDTCTPLFGKHKVLLNGDWVGLCADSESFVAELK 601

Query: 622  RKRRRNQSLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENNTFQSLLD 681
             +RR+++   ++E+KRD+   EVRIF+DAGR+LRPLLVVENL K+ + K     F  LLD
Sbjct: 602  SRRRQSELPREMEIKRDKDDNEVRIFTDAGRLLRPLLVVENLQKLKQEKPSQYPFDHLLD 661

Query: 682  KGIIELIGTEEEEDCRTAWGIKYLMENEGTTKYSHCELDMSFLLGLSCGLVPFANHDHAR 741
             GI+ELIG EEEEDC TAWGIK L++      Y+HCELD+SFLLG+SC +VPFANHDH R
Sbjct: 662  HGILELIGIEEEEDCNTAWGIKQLLKEPKI--YTHCELDLSFLLGVSCAVVPFANHDHGR 721

Query: 742  RVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMNADCLGTPGYLSSHSGI 801
            RVLYQSQKH  QAIGFS+TN N R DTLS QL YPQ+PLF+T+ ++CL            
Sbjct: 722  RVLYQSQKHCQQAIGFSSTNPNIRCDTLSQQLFYPQKPLFKTLASECL------------ 781

Query: 802  SPRPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNKESSEK 861
              +   +NGQNAIVAVNVHLGYNQEDS+VMN+ASLERGMFRSE IRSYKA+VD K+ SEK
Sbjct: 782  -KKEVLFNGQNAIVAVNVHLGYNQEDSIVMNKASLERGMFRSEQIRSYKAEVDAKD-SEK 841

Query: 862  RRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTE 921
            R+K D+ + FGKT SKIG+VDSL+DDGFP+IGAN+ +GDIVIGRC ESGADHSIKLKHTE
Sbjct: 842  RKKMDELVQFGKTHSKIGKVDSLEDDGFPFIGANMSTGDIVIGRCTESGADHSIKLKHTE 901

Query: 922  KGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQG 981
            +G+VQKVVLSSND+GKN+A V LRQVRSPCLGDKFSSMHGQKGVLG+LE Q+NFPFTIQG
Sbjct: 902  RGIVQKVVLSSNDEGKNFAAVSLRQVRSPCLGDKFSSMHGQKGVLGYLEEQQNFPFTIQG 961

Query: 982  IVPDIVINPHAFPSRQTPGQLLEAALGKGIAA-----GGSLKY------ATPFSTPSVDA 1041
            IVPDIVINPHAFPSRQTPGQLLEAAL KGIA      G S  Y      ATPFSTP V  
Sbjct: 962  IVPDIVINPHAFPSRQTPGQLLEAALSKGIACPIQKEGSSAAYTKLTRHATPFSTPGVTE 1021

Query: 1042 ITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPL 1101
            IT+QLHRAGFSRWG+ERVYNGR+GEMMRS+IFMGPTFYQRL+HM+EDKVKFRNTGPVHPL
Sbjct: 1022 ITEQLHRAGFSRWGNERVYNGRSGEMMRSMIFMGPTFYQRLVHMSEDKVKFRNTGPVHPL 1081

Query: 1102 TRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQ 1161
            TRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMH+C+KCK  A+VI+
Sbjct: 1082 TRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICRKCKTYANVIE 1141

Query: 1162 RSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1195
            R+ + GRKIRGPYCRVC S D +VRV VPYGAKLLCQELFSMGI L F+T+LC
Sbjct: 1142 RTPSSGRKIRGPYCRVCVSSDHVVRVYVPYGAKLLCQELFSMGITLNFDTKLC 1172

BLAST of MC11g0405 vs. ExPASy Swiss-Prot
Match: Q9LV32 (DNA-directed RNA polymerase D subunit 2b OS=Arabidopsis thaliana OX=3702 GN=NRPD2b PE=2 SV=1)

HSP 1 Score: 1597.4 bits (4135), Expect = 0.0e+00
Identity = 784/1186 (66.10%), Postives = 938/1186 (79.09%), Query Frame = 0

Query: 26   MDTDDDDYSEAVNIREIGEGFLKDFCKKASMAFFNEYGLISHQINSYNDFIESGLQKAFD 85
            MD D+ + +  +NI E+GE FL+ FCKKA+ +FF E+GLISHQ+NSYN FIE GLQ  F+
Sbjct: 1    MDVDEIESAGQINISELGESFLQTFCKKAATSFFEEFGLISHQLNSYNFFIEHGLQNVFE 60

Query: 86   YFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNM 145
             FG+I+V+P +D  KK DG+WRYA+V F K+                             
Sbjct: 61   SFGDILVEPSFDVIKKKDGDWRYATV-FKKI----------------------------- 120

Query: 146  TYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNREIFIGRLPVMVNSDLCW 205
                              +++ DKFKTG+D+YV+K++L    ++I IG +PVMV S LC 
Sbjct: 121  ------------------VIKHDKFKTGQDEYVEKEILDVKKQDILIGSIPVMVKSVLCK 180

Query: 206  MKEEQKRDCE-----FDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYRSEVKR 265
              E+ K +C+     FD GGYF+IKGAEK+FIAQEQ+C +RLWISN   WTV++RSE KR
Sbjct: 181  TSEKGKENCKKGNCAFDQGGYFVIKGAEKVFIAQEQMCTKRLWISN-SPWTVSFRSETKR 240

Query: 266  NRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDKEVVDLIDYGRDDP 325
            NR I+RL EN K+E+ K  EKVL VYFLSTEIPVW+LFFALGVSSDKE +DLI +  DD 
Sbjct: 241  NRFIVRLSENEKAEDYKIMEKVLTVYFLSTEIPVWLLFFALGVSSDKEAMDLIAFDGDDA 300

Query: 326  TVLNILFASVREVDNDDKWKDFRRGKKALNYLDNEIKKTSFPPTEKIEDCLNLYLFASLK 385
            ++ N L AS+ E   D   + FR G  AL Y++++IK T FPP E ++DCL LYLF  L+
Sbjct: 301  SITNSLIASIHEA--DAVCEAFRCGNNALTYVEHQIKSTKFPPAESVDDCLRLYLFPCLQ 360

Query: 386  GLKQKCRFLGYMVKCILQAYTGRRKSDNRDDFRNKRFELAGELLEREIKVHIAHARRRME 445
            GLK+K RFLGYMVKC+L AY G+RK +NRD FRNKR ELAGELLEREI+VH+AHARR+M 
Sbjct: 361  GLKKKARFLGYMVKCLLSAYAGKRKCENRDSFRNKRIELAGELLEREIRVHLAHARRKMT 420

Query: 446  KALQRDLYGDREVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANP 505
            +A+Q+ L GD +++PIEHYLDAS+ITNGL+RAFSTGAW+HPF++MER+SGVVA LGRANP
Sbjct: 421  RAMQKQLSGDGDLKPIEHYLDASVITNGLNRAFSTGAWSHPFRKMERVSGVVANLGRANP 480

Query: 506  LQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLN 565
            LQT+ +LRRTRQQV YTGKVGDAR+PHPSHWGRVCFLSTPDGENCGL+KNMS+ GLVS  
Sbjct: 481  LQTLIDLRRTRQQVLYTGKVGDARHPHPSHWGRVCFLSTPDGENCGLVKNMSLLGLVSTQ 540

Query: 566  TLKPIVPTLFRCGMENLVDDTFTPLSGSYKIFLNGEWVGICADSVSFVTKLRRKRRRNQS 625
             L+ +V  LF CGME L++DT TPL G +K+ LNG+WVG+CADS SFV +L+ +RR+++ 
Sbjct: 541  GLESVVEMLFTCGMEELMNDTSTPLCGKHKVLLNGDWVGLCADSESFVGELKSRRRQSEL 600

Query: 626  LHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENNTFQSLLDKGIIELIG 685
              ++E+KRD+   EVRIF+DAGR+LRPLLVVENL+K+ + K     F+ LLD+GI+ELIG
Sbjct: 601  PLEMEIKRDKDDNEVRIFTDAGRLLRPLLVVENLHKLKQDKPTQYPFKHLLDQGILELIG 660

Query: 686  TEEEEDCRTAWGIKYLMENEGTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQK 745
             EEEEDC TAWGIK L++      Y+HCELD+SFLLG+SC +VPFANHDH +RVLYQSQK
Sbjct: 661  IEEEEDCTTAWGIKQLLKE--PKNYTHCELDLSFLLGVSCAIVPFANHDHGKRVLYQSQK 720

Query: 746  HSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMNADCLGTPGYLSSHSGISPRPEFYN 805
            H  QAIGFS+TN N R DTLS QL YPQ+PLF+T+ ++CL              +   +N
Sbjct: 721  HCQQAIGFSSTNPNIRCDTLSQQLFYPQKPLFKTLASECL-------------EKEVLFN 780

Query: 806  GQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNKESSEKRRKSDDAI 865
            GQNAIVAVNVHLGYNQEDS+VMN+ASLERGMFRSE IRSYKA+VD K+ SEKR+K D+ +
Sbjct: 781  GQNAIVAVNVHLGYNQEDSIVMNKASLERGMFRSEQIRSYKAEVDTKD-SEKRKKMDELV 840

Query: 866  NFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQKVV 925
             FGKT SKIG+VDSL+DDGFP+IGAN+ +GDIVIGRC ESGADHSIKLKHTE+G+VQKVV
Sbjct: 841  QFGKTYSKIGKVDSLEDDGFPFIGANMSTGDIVIGRCTESGADHSIKLKHTERGIVQKVV 900

Query: 926  LSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVIN 985
            LSSND+GKN+A V LRQVRSPCLGDKFSSMHGQKGVLG+LE Q+NFPFTIQGIVPDIVIN
Sbjct: 901  LSSNDEGKNFAAVSLRQVRSPCLGDKFSSMHGQKGVLGYLEEQQNFPFTIQGIVPDIVIN 960

Query: 986  PHAFPSRQTPGQLLEAALGKGIAA------GGSLKY------ATPFSTPSVDAITDQLHR 1045
            PHAFPSRQTPGQLLEAAL KGIA       G S  Y      ATPFSTP V  IT+QLHR
Sbjct: 961  PHAFPSRQTPGQLLEAALSKGIACPIQKKEGSSAAYTKLTRHATPFSTPGVTEITEQLHR 1020

Query: 1046 AGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVAD 1105
            AGFSRWG+ERVYNGR+GEMMRSLIFMGPTFYQRL+HM+E+KVKFRNTGPVHPLTRQPVAD
Sbjct: 1021 AGFSRWGNERVYNGRSGEMMRSLIFMGPTFYQRLVHMSENKVKFRNTGPVHPLTRQPVAD 1080

Query: 1106 RKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGR 1165
            RKRFGGI+FGEMERDCLIAHGASANLHERLFTLSDSSQMH+C+KCK  A+VI+R+ + GR
Sbjct: 1081 RKRFGGIRFGEMERDCLIAHGASANLHERLFTLSDSSQMHICRKCKTYANVIERTPSSGR 1119

Query: 1166 KIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1195
            KIRGPYCRVC S D +VRV VPYGAKLLCQELFSMGI L F+T+LC
Sbjct: 1141 KIRGPYCRVCASSDHVVRVYVPYGAKLLCQELFSMGITLNFDTKLC 1119

BLAST of MC11g0405 vs. ExPASy Swiss-Prot
Match: P38420 (DNA-directed RNA polymerase II subunit 2 OS=Arabidopsis thaliana OX=3702 GN=NRPB2 PE=1 SV=2)

HSP 1 Score: 683.3 bits (1762), Expect = 4.8e-195
Identity = 429/1232 (34.82%), Postives = 661/1232 (53.65%), Query Frame = 0

Query: 16   EAEYYSPGTDMDTDDDDYSEAVNIREIGEGFLKDFCKKASMAFFNEYGLISHQINSYNDF 75
            E   Y P      DDDD           E   ++       A+F E GL+  Q++S+++F
Sbjct: 2    EYNEYEPEPQYVEDDDD-----------EEITQEDAWAVISAYFEEKGLVRQQLDSFDEF 61

Query: 76   IESGLQKAFDYFGEIVVQP--GYDPSKKGDGEWRYASVKFGKVTLDKPKFWGGAASGKEY 135
            I++ +Q+  D   +I ++P   ++P  + D       + FG++ L KP      + G+  
Sbjct: 62   IQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMM--TESDGETA 121

Query: 136  NMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNREIFIG 195
             + P+ ARL+N+TYS+ + +++     T+R++     K G D   ++   +QD  ++FIG
Sbjct: 122  TLFPKAARLRNLTYSAPLYVDV-----TKRVI-----KKGHDG--EEVTETQDFTKVFIG 181

Query: 196  RLPVMVNSDLCWMKEEQKRD------CEFDHGGYFLIKGAEKIFIAQEQICLRRLWI-SN 255
            ++P+M+ S  C + +  ++D      C +D GGYF+I G+EK+ IAQE++    +++   
Sbjct: 182  KVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKK 241

Query: 256  IQGWTVAYRSEVK-----RNR----LIIRLVENSKSEELKSKEKV-LNVYFLSTEIPVWI 315
             Q    AY  EV+     +NR    + +R++  + ++   S + +   + ++ TEIP+ I
Sbjct: 242  RQPNKYAYVGEVRSMAENQNRPPSTMFVRMLARASAKGGSSGQYIRCTLPYIRTEIPIII 301

Query: 316  LFFALGVSSDKEVVDLIDYGRDDPTVLNILFASVRE---VDNDDKWKDF--RRG------ 375
            +F ALG  +DK++++ I Y   D  ++ +L  S+ E   + N     D+  +RG      
Sbjct: 302  VFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQLVALDYIGKRGATVGVT 361

Query: 376  -KKALNYLDNEIKKTSFPPTEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCILQAYTGRR 435
             +K + Y  + ++K   P     E C             +K  + GY++  +L    GRR
Sbjct: 362  KEKRIKYARDILQKEMLPHVGIGEHCET-----------KKAYYFGYIIHRLLLCALGRR 421

Query: 436  KSDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDREVRPIEHYLDASI 495
              D+RD + NKR +LAG LL    ++      R +   +Q+ +   +EV  ++  + A  
Sbjct: 422  PEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVN-LQFAIKAKT 481

Query: 496  ITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDAR 555
            IT+GL  + +TG W        R +GV   L R     T++ LRR    +   GK+   R
Sbjct: 482  ITSGLKYSLATGNWGQANAAGTR-AGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPR 541

Query: 556  YPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLK-PIVPTLFRCGMENLVDDTFT 615
              H S WG +C   TP+G+ CGL+KN+++   +++ +   PI+  L   G EN  + + +
Sbjct: 542  QLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPS 601

Query: 616  PLSGSYKIFLNGEWVGICADSVSFVTKLRRKRRRNQSLHQVEVKRDEQLKEVRIFSDAGR 675
             +  + KIF+NG WVG+  D    V  LRR RRR     +V V RD +LKE+RI++D GR
Sbjct: 602  VIPQATKIFVNGMWVGVHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGR 661

Query: 676  ILRPLLVVENLNKIDKSK----------GENNTFQSLLDKGIIELIGTEEEEDCRTAWGI 735
              RPL +V+N   + K +           E + +  L+ KG IE I TEEEE    +  I
Sbjct: 662  CSRPLFIVDNQKLLIKKRDIYALQQRESAEEDGWHHLVAKGFIEYIDTEEEETTMISMTI 721

Query: 736  KYLM------ENEGTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIG 795
              L+      E   T  Y+HCE+  S +LG+   ++PF +H+ + R  YQS     QA+G
Sbjct: 722  SDLVQARLRPEEAYTENYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAM-GKQAMG 781

Query: 796  FSTTNSNFRVDTLSHQLHYPQRPLFRTMNADCLGTPGYLSSHSGISPRPEFYNGQNAIVA 855
               TN  FR+DTL++ L+YPQ+PL  T   +          H      P    G NAIVA
Sbjct: 782  IYVTNYQFRMDTLAYVLYYPQKPLVTTRAME----------HLHFRQLPA---GINAIVA 841

Query: 856  VNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNKESSEKRRKSDDAINFGKTQS 915
            ++ + GYNQEDS++MN++S++RG FRS   RSY+   + K+     ++     + G T  
Sbjct: 842  ISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRD--EEKKMGTLVKEDFGRPDRGSTMG 901

Query: 916  -KIGRVDSLDDDGFPYIGANLQSGDIVIGRCAE-------------SGADHSIKLKHTEK 975
             + G  D LDDDG    G  +   D++IG+                +  DHSI L+H+E 
Sbjct: 902  MRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDEAQGQSSRYTRRDHSISLRHSET 961

Query: 976  GMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGI 1035
            GMV +V+L++N DG  +  V +R VR P +GDKFSS HGQKG +G   +QE+ P+TI+G+
Sbjct: 962  GMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGV 1021

Query: 1036 VPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVDAITDQLHRAGFSR 1095
             PDI++NPHA PSR T GQL+E  +GK  A  G    ATPF+  +VD I+  LH+ G+  
Sbjct: 1022 TPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQM 1081

Query: 1096 WGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFG 1155
             G ER+YNG TG  + ++IF+GPT+YQRL HM +DK+  R  GPV  LTRQP   R R G
Sbjct: 1082 RGFERMYNGHTGRPLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDG 1141

Query: 1156 GIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGP 1186
            G++FGEMERDC+IAHGA+  L ERLF  SD+ ++HVC+ C  +A           K    
Sbjct: 1142 GLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEVCGLIA-------IANLKKNSF 1172

BLAST of MC11g0405 vs. ExPASy Swiss-Prot
Match: Q42877 (DNA-directed RNA polymerase II subunit RPB2 OS=Solanum lycopersicum OX=4081 GN=RPB2 PE=2 SV=1)

HSP 1 Score: 682.9 bits (1761), Expect = 6.3e-195
Identity = 424/1220 (34.75%), Postives = 661/1220 (54.18%), Query Frame = 0

Query: 30   DDDYSEAVNIREIGEGFLKDFCKKASMAFFNEYGLISHQINSYNDFIESGLQKAFDYFGE 89
            +D+Y    N+ +  E   ++       A+F E GL+  Q++S+++FI++ +Q+  D   +
Sbjct: 4    EDEYEPQYNVDDDEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESAD 63

Query: 90   IVVQP--GYDPSKKGDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTY 149
            I ++P   ++P  + D       + FG++ L KP      + G+   + P+ ARL+N+TY
Sbjct: 64   IEIRPESQHNPGHQSDFAETIYKINFGQIYLSKPMM--TESDGETATLFPKAARLRNLTY 123

Query: 150  SSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNREIFIGRLPVMVNSDLCWMK 209
            S+ + +++     T+R++     K G D   ++   +QD  ++FIG++P+M+ S  C + 
Sbjct: 124  SAPLYVDV-----TKRVI-----KKGHDG--EEVTETQDFTKVFIGKVPIMLRSSYCTLY 183

Query: 210  EEQKRD------CEFDHGGYFLIKGAEKIFIAQEQICLRRLWI-SNIQGWTVAYRSEVK- 269
            +  ++D      C  D GGYF+I G+EK+ IAQE++    +++    Q    A+ +EV+ 
Sbjct: 184  QNSEKDLTELGECPLDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAFVAEVRS 243

Query: 270  ----RNR----LIIRLVENSKSEELKSKEKV-LNVYFLSTEIPVWILFFALGVSSDKEVV 329
                +NR    + +R++  + ++   S + +   + ++ TEIP+ I+F ALG  +DK+++
Sbjct: 244  MADTQNRPPSTMFVRMLSRTSAKGGSSGQYIRATLPYIRTEIPIIIVFRALGFVADKDIL 303

Query: 330  DLIDYGRDDPTVLNILFASVRE---VDNDDKWKDF--RRG-------KKALNYLDNEIKK 389
            + I Y  +D  ++ +L  S+ E   + N     D+  +RG       +K + Y    ++K
Sbjct: 304  EHICYDFNDTQMMELLRPSLEEAFVIQNQQVALDYIGKRGATVGVTREKRIKYAKEILQK 363

Query: 390  TSFPPTEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCILQAYTGRRKSDNRDDFRNKRFE 449
               P     E C             +K  + GY++  +L    GRR  D+RD + NKR +
Sbjct: 364  EMLPHVGVGEYCET-----------KKAYYFGYIIHRLLLCALGRRAEDDRDHYGNKRLD 423

Query: 450  LAGELLEREIKVHIAHARRRMEKALQRDLYGDREVRPIEHYLDASIITNGLSRAFSTGAW 509
            LAG LL    ++      R +   +Q+ +   ++V  ++  + A  IT+GL  + +TG W
Sbjct: 424  LAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVN-LQFAIKAKTITSGLKYSLATGNW 483

Query: 510  AHPFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLS 569
                    R +GV   L R     T++ LRR    +   GK+   R  H S WG +C   
Sbjct: 484  GQANAAGTR-AGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAE 543

Query: 570  TPDGENCGLIKNMSITGLVSLNTLK-PIVPTLFRCGMENLVDDTFTPLSGSYKIFLNGEW 629
            TP+G+ CGL+KN+++   +++ +   PI+  L   G EN  + +   +  + KIF+NG W
Sbjct: 544  TPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGTW 603

Query: 630  VGICADSVSFVTKLRRKRRRNQSLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKI 689
            VGI  D    V  LRR RRR     +V V RD +LKE+RI++D GR  RPL +VE    +
Sbjct: 604  VGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLM 663

Query: 690  DKSKG----------ENNTFQSLLDKGIIELIGTEEEEDCRTAWGIKYLME---NEG--- 749
             K K           +   +  L+ KG IE I TEEEE    +  I  L++   N G   
Sbjct: 664  IKKKDIQTLQQRESPDEGGWHDLVAKGYIEYIDTEEEETTMISMTINDLVQARLNPGDAY 723

Query: 750  TTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLS 809
            +  Y+HCE+  S +LG+   ++PF +H+ + R  YQS     QA+G   TN  FR+DTL+
Sbjct: 724  SDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAM-GKQAMGIYVTNYQFRMDTLA 783

Query: 810  HQLHYPQRPLFRTMNADCLGTPGYLSSHSGISPRPEFYNGQNAIVAVNVHLGYNQEDSLV 869
            + L+YPQ+PL  T   +          H      P    G NAIVA++ + GYNQEDS++
Sbjct: 784  YVLYYPQKPLVTTRAME----------HLHFRQLPA---GINAIVAISCYSGYNQEDSVI 843

Query: 870  MNRASLERGMFRSEHIRSYKADVDNKESS---EKRRKSDDAINFGKTQSKIGRVDSLDDD 929
            MN++S++RG FRS   RSY+ D + K  +   E   + D A   G    + G  D LDDD
Sbjct: 844  MNQSSIDRGFFRSLFFRSYR-DEEKKMGTLVKEDFGRPDRASTMG---MRHGSYDKLDDD 903

Query: 930  GFPYIGANLQSGDIVIGRCAE-------------SGADHSIKLKHTEKGMVQKVVLSSND 989
            G    G  +   D++IG+                +  DHS  L+H+E GMV +V+L++N 
Sbjct: 904  GLAPPGTRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRHSETGMVDQVLLTTNA 963

Query: 990  DGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFP 1049
            DG  +  V +R VR P +GDKFSS HGQKG +G   +QE+ P+T++GI PDI++NPHA P
Sbjct: 964  DGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIP 1023

Query: 1050 SRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVDAITDQLHRAGFSRWGSERVYNGRTG 1109
            SR T GQL+E  +GK  A  G    ATPF+  +VD I+  LH+ G+   G E +YNG TG
Sbjct: 1024 SRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTG 1083

Query: 1110 EMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCL 1169
              + ++IF+GPT+YQRL HM +DK+  R  GPV  LTRQP   R R GG++FGEMERDC+
Sbjct: 1084 RRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCM 1143

Query: 1170 IAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGPYCRVCESVDDIV 1186
            IAHGA+  L ERLF  SD+ ++HVC++C  +A           K     CR C++  DIV
Sbjct: 1144 IAHGAAHFLKERLFDQSDAYRVHVCERCGLIA-------IANLKKNSFECRGCKNKTDIV 1171

BLAST of MC11g0405 vs. ExPASy Swiss-Prot
Match: Q54J75 (DNA-directed RNA polymerase II subunit rpb2 OS=Dictyostelium discoideum OX=44689 GN=polr2b PE=3 SV=1)

HSP 1 Score: 638.6 bits (1646), Expect = 1.4e-181
Identity = 412/1197 (34.42%), Postives = 633/1197 (52.88%), Query Frame = 0

Query: 57   AFFNEYGLISHQINSYNDFIESGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYA------S 116
            A+F E GL+  Q++S+++FI++ +Q+  D    I ++P    S+   G+   +      S
Sbjct: 29   AYFQEKGLVRQQLDSFDEFIQNTMQEIIDESPPITLRP---ESQHHPGQAVVSNNVSTFS 88

Query: 117  VKFGKVTLDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKF 176
            VKFG++ L KP        G    + P  AR++N+TYS+ + ++I   V T    + D+ 
Sbjct: 89   VKFGQIYLSKPT---AEIDGVSQQVTPNQARIRNLTYSAPLFVDITKTVMTGSKSKGDER 148

Query: 177  KTGKDQYVDKDLLSQDNREIFIGRLPVMVNSDLCWMKEEQKRD------CEFDHGGYFLI 236
            +T      D+ L     + IFIG++P+M+ S  C + E   RD      C FD GGYF+I
Sbjct: 149  RT------DEVL-----KRIFIGKVPIMLRSQYCMLNEADDRDLTTMGECSFDQGGYFII 208

Query: 237  KGAEKIFIAQEQICLRRLWI-SNIQGWTVAYRSEVK---------RNRLIIRLVENSKSE 296
             G+EK+ IAQE++    +++         +Y +E++          + + ++++ N+   
Sbjct: 209  NGSEKVLIAQEKMNNNHVYVFKKSPPSKYSYVAEIRSCQETGSRPTSTMYLKMLHNTNKG 268

Query: 297  ELKSKEKVLNVYFLSTEIPVWILFFALGVSSDKEVVDLIDYGRDDPTVLNILFASVRE-- 356
             +  K     V ++  ++PV I+F ALG  +DK++++ I Y   D  +++++  S+ E  
Sbjct: 269  PVGIK---ATVPYIKQDVPVIIVFRALGFVADKDILEHICYDFKDAQMMDLMRPSLEESF 328

Query: 357  -VDNDDKWKDF--RRG------KKALNYLDNEIKKTSFPPTEKIEDCLNLYLFASLKGLK 416
             + + +   D+  +RG      ++ + +    ++K   P     E       F   K   
Sbjct: 329  VIQSQEVALDYLGKRGSTMGTREQRIKFAREVLQKEMLPHVSVAE-------FYETK--- 388

Query: 417  QKCRFLGYMVKCILQAYTGRRKSDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKAL 476
             K  + GY+   +L A   RR  D+RD F NKR +LAG LL    +       + +   L
Sbjct: 389  -KAFYFGYITHRLLLASLERRPLDDRDHFANKRLDLAGPLLGTLFRQLFKKLTKDVRLYL 448

Query: 477  QRDLYGDREVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANPLQT 536
            QR +  D+E       + +  IT+GL  + +TG W    K     SGV   L R     T
Sbjct: 449  QRCIDKDKEF-IASSAVKSKTITSGLKYSLATGNWGSS-KSGGTKSGVAQVLNRLTFAST 508

Query: 537  MAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTL- 596
            ++ LRR    +   GK+   R  H +HWG VC   TP+G+ CGL+KN+++   +S+ +  
Sbjct: 509  LSHLRRLNTPIGREGKLAKPRQLHNTHWGIVCPSETPEGQACGLVKNLAMMSYISVGSAS 568

Query: 597  KPIVPTLFRCGMENLVD-DTFTPLSGSYKIFLNGEWVGICADSVSFVTKLRRKRRRNQSL 656
            +PI+  L     ENL +    + +  + KIF+NG WVGI       ++ LR  RR     
Sbjct: 569  QPILEFLEEWTTENLEEISDLSSIFSATKIFVNGMWVGIHHQPDKLLSTLRLLRRCGDVS 628

Query: 657  HQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENN--------TFQSLLDK 716
             +V V RD + KE+R+++D GR  RPL VV++ NK+   K   N         +Q LL +
Sbjct: 629  VEVSVVRDIREKELRLYTDPGRCCRPLFVVQD-NKVQIKKQHINKLINNDEYKWQDLLSE 688

Query: 717  GIIELIGTEEEEDCRTAWGIKYL--MENEGTT-KYSHCELDMSFLLGLSCGLVPFANHDH 776
            GI+E I  EEEE    A   + L  M NE     Y+HCE+  S +LG+ C ++PF +H+ 
Sbjct: 689  GIVEYIDAEEEETVLIAMTPEDLVPMPNEQIVHTYTHCEIHPSMILGICCSIIPFPDHNQ 748

Query: 777  ARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMNADCLGTPGYLSSHS 836
            + R  YQ+     QA+G   TN   R+DT++H L YPQ+PL  T + +      YL    
Sbjct: 749  SPRNTYQAAM-GKQAMGVYITNYQLRMDTMAHVLFYPQKPLVTTRSME------YLHFR- 808

Query: 837  GISPRPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNKESS 896
                  E   GQN  VA+  + GYNQEDS+++N+++++RG+FRS   R+YK D   K++S
Sbjct: 809  ------ELPAGQNVCVAIACYSGYNQEDSVILNQSAIDRGLFRSMFYRAYK-DEQKKQTS 868

Query: 897  EKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCA------------ 956
                  +          + G  + +DDDG    G  +   DI+IG+              
Sbjct: 869  LMEEVFEKPERDTCAGMRHGSYEKIDDDGLVAPGVRVAGDDIIIGKTTPLPPSDDDLGPK 928

Query: 957  ---ESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKG 1016
                +  D S  L+ +E G+V +V+L+++ +G  +  V +R +R P +GDKFSS HGQKG
Sbjct: 929  TRRHTKRDSSTALRSSETGIVDQVILTTSGEGFKFCKVRVRSMRVPQIGDKFSSRHGQKG 988

Query: 1017 VLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFS 1076
              G    QE+ PFT++GIVPDI++NPHA PSR T GQL+E  LGK  A+ G    ATPF+
Sbjct: 989  TCGMAYRQEDLPFTVEGIVPDIIVNPHAIPSRMTIGQLIECLLGKVSASTGDEGDATPFT 1048

Query: 1077 TPSVDAITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNT 1136
              +V+AI+  LH+ G+   G E +YNG TG  M + IF+GPT+YQRL HM +DK+  R+ 
Sbjct: 1049 DVTVEAISQALHKIGYQMTGHEVMYNGHTGRRMDAQIFIGPTYYQRLKHMVDDKIHSRSR 1108

Query: 1137 GPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKN 1193
            GPV  LTRQPV  R R GG++FGEMERDC+I+HGA+  L ERLF  SDS ++H+C  C  
Sbjct: 1109 GPVQILTRQPVEGRSRDGGLRFGEMERDCMISHGAAQFLKERLFDQSDSYRVHICDICGL 1168

BLAST of MC11g0405 vs. NCBI nr
Match: XP_022138042.1 (DNA-directed RNA polymerases IV and V subunit 2-like [Momordica charantia] >XP_022138109.1 DNA-directed RNA polymerases IV and V subunit 2-like [Momordica charantia])

HSP 1 Score: 2413 bits (6253), Expect = 0.0
Identity = 1194/1194 (100.00%), Postives = 1194/1194 (100.00%), Query Frame = 0

Query: 1    MGTSSGAKDDIEMNSEAEYYSPGTDMDTDDDDYSEAVNIREIGEGFLKDFCKKASMAFFN 60
            MGTSSGAKDDIEMNSEAEYYSPGTDMDTDDDDYSEAVNIREIGEGFLKDFCKKASMAFFN
Sbjct: 1    MGTSSGAKDDIEMNSEAEYYSPGTDMDTDDDDYSEAVNIREIGEGFLKDFCKKASMAFFN 60

Query: 61   EYGLISHQINSYNDFIESGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDK 120
            EYGLISHQINSYNDFIESGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDK
Sbjct: 61   EYGLISHQINSYNDFIESGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDK 120

Query: 121  PKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDK 180
            PKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDK
Sbjct: 121  PKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDK 180

Query: 181  DLLSQDNREIFIGRLPVMVNSDLCWMKEEQKRDCEFDHGGYFLIKGAEKIFIAQEQICLR 240
            DLLSQDNREIFIGRLPVMVNSDLCWMKEEQKRDCEFDHGGYFLIKGAEKIFIAQEQICLR
Sbjct: 181  DLLSQDNREIFIGRLPVMVNSDLCWMKEEQKRDCEFDHGGYFLIKGAEKIFIAQEQICLR 240

Query: 241  RLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA 300
            RLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA
Sbjct: 241  RLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA 300

Query: 301  LGVSSDKEVVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKKALNYLDNEIKKTS 360
            LGVSSDKEVVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKKALNYLDNEIKKTS
Sbjct: 301  LGVSSDKEVVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKKALNYLDNEIKKTS 360

Query: 361  FPPTEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCILQAYTGRRKSDNRDDFRNKRFELA 420
            FPPTEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCILQAYTGRRKSDNRDDFRNKRFELA
Sbjct: 361  FPPTEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCILQAYTGRRKSDNRDDFRNKRFELA 420

Query: 421  GELLEREIKVHIAHARRRMEKALQRDLYGDREVRPIEHYLDASIITNGLSRAFSTGAWAH 480
            GELLEREIKVHIAHARRRMEKALQRDLYGDREVRPIEHYLDASIITNGLSRAFSTGAWAH
Sbjct: 421  GELLEREIKVHIAHARRRMEKALQRDLYGDREVRPIEHYLDASIITNGLSRAFSTGAWAH 480

Query: 481  PFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTP 540
            PFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTP
Sbjct: 481  PFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTP 540

Query: 541  DGENCGLIKNMSITGLVSLNTLKPIVPTLFRCGMENLVDDTFTPLSGSYKIFLNGEWVGI 600
            DGENCGLIKNMSITGLVSLNTLKPIVPTLFRCGMENLVDDTFTPLSGSYKIFLNGEWVGI
Sbjct: 541  DGENCGLIKNMSITGLVSLNTLKPIVPTLFRCGMENLVDDTFTPLSGSYKIFLNGEWVGI 600

Query: 601  CADSVSFVTKLRRKRRRNQSLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKS 660
            CADSVSFVTKLRRKRRRNQSLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKS
Sbjct: 601  CADSVSFVTKLRRKRRRNQSLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKS 660

Query: 661  KGENNTFQSLLDKGIIELIGTEEEEDCRTAWGIKYLMENEGTTKYSHCELDMSFLLGLSC 720
            KGENNTFQSLLDKGIIELIGTEEEEDCRTAWGIKYLMENEGTTKYSHCELDMSFLLGLSC
Sbjct: 661  KGENNTFQSLLDKGIIELIGTEEEEDCRTAWGIKYLMENEGTTKYSHCELDMSFLLGLSC 720

Query: 721  GLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMNADCL 780
            GLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMNADCL
Sbjct: 721  GLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMNADCL 780

Query: 781  GTPGYLSSHSGISPRPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSY 840
            GTPGYLSSHSGISPRPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSY
Sbjct: 781  GTPGYLSSHSGISPRPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSY 840

Query: 841  KADVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES 900
            KADVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES
Sbjct: 841  KADVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES 900

Query: 901  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFL 960
            GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFL
Sbjct: 901  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFL 960

Query: 961  ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVD 1020
            ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVD
Sbjct: 961  ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVD 1020

Query: 1021 AITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHP 1080
            AITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHP
Sbjct: 1021 AITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHP 1080

Query: 1081 LTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVI 1140
            LTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVI
Sbjct: 1081 LTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVI 1140

Query: 1141 QRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1194
            QRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC
Sbjct: 1141 QRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1194

BLAST of MC11g0405 vs. NCBI nr
Match: XP_038897771.1 (DNA-directed RNA polymerases IV and V subunit 2-like [Benincasa hispida])

HSP 1 Score: 2293 bits (5942), Expect = 0.0
Identity = 1125/1195 (94.14%), Postives = 1169/1195 (97.82%), Query Frame = 0

Query: 1    MGTSSGAKDDIEMNSEAEYYSPGTDMDTDDDDY-SEAVNIREIGEGFLKDFCKKASMAFF 60
            MGTS G KDDIEMNSE E  SPGTDMDTDDDDY SE VNIR++GE FLKDFCKK+SMAFF
Sbjct: 1    MGTS-GTKDDIEMNSEGEDLSPGTDMDTDDDDYYSEPVNIRDLGEAFLKDFCKKSSMAFF 60

Query: 61   NEYGLISHQINSYNDFIESGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLD 120
            N+YGLISHQINSYNDFI+SG+QKAFDYFGEI+VQPGYDPSKKGDGEWRYASVKFGKVTLD
Sbjct: 61   NQYGLISHQINSYNDFIKSGIQKAFDYFGEILVQPGYDPSKKGDGEWRYASVKFGKVTLD 120

Query: 121  KPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVD 180
            KPKFWGGAASGKEYNMLPRHARLQNMTYSSRMK+NI++EVYTQRLV SDKFKTGKD+YVD
Sbjct: 121  KPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKINISLEVYTQRLVSSDKFKTGKDKYVD 180

Query: 181  KDLLSQDNREIFIGRLPVMVNSDLCWMKEEQKRDCEFDHGGYFLIKGAEKIFIAQEQICL 240
            K+ + +DNR++FIGRLPVMVNSDLCWMKEEQKRDCEFDHGGYFLIKGAEKIFIAQEQICL
Sbjct: 181  KEHVKEDNRDVFIGRLPVMVNSDLCWMKEEQKRDCEFDHGGYFLIKGAEKIFIAQEQICL 240

Query: 241  RRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFF 300
            RRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTE+PVWILFF
Sbjct: 241  RRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEVPVWILFF 300

Query: 301  ALGVSSDKEVVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKKALNYLDNEIKKT 360
            ALGVSSDKE+VDLIDYGRDDP+VLNILFASVREVDNDDKWKDFRRGK+ALN+LDNE++KT
Sbjct: 301  ALGVSSDKEIVDLIDYGRDDPSVLNILFASVREVDNDDKWKDFRRGKRALNFLDNEVRKT 360

Query: 361  SFPPTEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCILQAYTGRRKSDNRDDFRNKRFEL 420
            SFPP EKIEDCLNLYLFASLKGLKQKCRFLGYMVKC+LQAYTGRRK DNRDDFRNKRFEL
Sbjct: 361  SFPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFEL 420

Query: 421  AGELLEREIKVHIAHARRRMEKALQRDLYGDREVRPIEHYLDASIITNGLSRAFSTGAWA 480
            AGELLEREIKVHIAHARRRMEKALQRDLYGDR+VRPIEHYLDASIITNGLSRAFSTGAWA
Sbjct: 421  AGELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYLDASIITNGLSRAFSTGAWA 480

Query: 481  HPFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLST 540
            H FKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCF+ST
Sbjct: 481  HSFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFIST 540

Query: 541  PDGENCGLIKNMSITGLVSLNTLKPIVPTLFRCGMENLVDDTFTPLSGSYKIFLNGEWVG 600
            PDGENCGLIKN+S+TGLVSLNTLKPIVPTLFRCGMENLVDDT T LSG YKIFL+GEWVG
Sbjct: 541  PDGENCGLIKNLSVTGLVSLNTLKPIVPTLFRCGMENLVDDTSTSLSGKYKIFLDGEWVG 600

Query: 601  ICADSVSFVTKLRRKRRRNQSLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDK 660
            +C DS+SFVTK+RRKRRRN  LHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLN+IDK
Sbjct: 601  VCEDSLSFVTKVRRKRRRNPLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNRIDK 660

Query: 661  SKGENNTFQSLLDKGIIELIGTEEEEDCRTAWGIKYLMENEGTTKYSHCELDMSFLLGLS 720
            SKGEN TFQSLLD+GIIELIGTEEEEDCRTAW IK+LME+EGTTKYSHCELDMSFLLGLS
Sbjct: 661  SKGENYTFQSLLDRGIIELIGTEEEEDCRTAWSIKHLMEDEGTTKYSHCELDMSFLLGLS 720

Query: 721  CGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMNADC 780
            CGLVPFANHDHARR L+QSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTM ADC
Sbjct: 721  CGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADC 780

Query: 781  LGTPGYLSSHSGISPRPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRS 840
            LGTPGYLSSH+GI P+PEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRS
Sbjct: 781  LGTPGYLSSHTGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRS 840

Query: 841  YKADVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAE 900
            YKA+VDNKESSEKRRKSDDAINFGKTQSKIGRVDSLD+DGFPYIGANLQSGDIVIGRCAE
Sbjct: 841  YKAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDEDGFPYIGANLQSGDIVIGRCAE 900

Query: 901  SGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGF 960
            SGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVV LRQVRSPCLGDKFSSMHGQKGVLGF
Sbjct: 901  SGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVSLRQVRSPCLGDKFSSMHGQKGVLGF 960

Query: 961  LESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSV 1020
            LESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA+GGSLKYATPFSTPSV
Sbjct: 961  LESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSLKYATPFSTPSV 1020

Query: 1021 DAITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVH 1080
            DAIT+QLHRAGFSRWGSERVYNGRTGEMM+SLIFMGPTFYQRLIHMAEDKVKFRNTGPVH
Sbjct: 1021 DAITEQLHRAGFSRWGSERVYNGRTGEMMQSLIFMGPTFYQRLIHMAEDKVKFRNTGPVH 1080

Query: 1081 PLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASV 1140
            PLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASV
Sbjct: 1081 PLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASV 1140

Query: 1141 IQRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1194
            IQRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC
Sbjct: 1141 IQRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1194

BLAST of MC11g0405 vs. NCBI nr
Match: XP_023524029.1 (DNA-directed RNA polymerases IV and V subunit 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 2288 bits (5929), Expect = 0.0
Identity = 1122/1194 (93.97%), Postives = 1166/1194 (97.65%), Query Frame = 0

Query: 1    MGTSSGAKDDIEMNSEAEYYSPGTDMDTDDDDYSEAVNIREIGEGFLKDFCKKASMAFFN 60
            MGTS GAKDDIEMNSE E  SPGTDMDTDDDDYSE VNI ++GE FLKDFCKK+SMAFFN
Sbjct: 1    MGTS-GAKDDIEMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGETFLKDFCKKSSMAFFN 60

Query: 61   EYGLISHQINSYNDFIESGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDK 120
            EYGLISHQ+NSYNDFI+SG+QK+FDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDK
Sbjct: 61   EYGLISHQLNSYNDFIKSGIQKSFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDK 120

Query: 121  PKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDK 180
            PKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTG+DQYVDK
Sbjct: 121  PKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGQDQYVDK 180

Query: 181  DLLSQDNREIFIGRLPVMVNSDLCWMKEEQKRDCEFDHGGYFLIKGAEKIFIAQEQICLR 240
            DLLSQDNR+IFIGRLPVMVNSDLCWMK++QKRDCEFDHGGYFLIKGAEKIFIAQEQICLR
Sbjct: 181  DLLSQDNRDIFIGRLPVMVNSDLCWMKDDQKRDCEFDHGGYFLIKGAEKIFIAQEQICLR 240

Query: 241  RLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA 300
            RLWISN QGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA
Sbjct: 241  RLWISNNQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA 300

Query: 301  LGVSSDKEVVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKKALNYLDNEIKKTS 360
            LGVSSD+E+VDLID+GR+DPTVLNILFASVR VDNDDKWKDFRRGK+ALN+L+NE+KKTS
Sbjct: 301  LGVSSDREIVDLIDFGREDPTVLNILFASVRVVDNDDKWKDFRRGKRALNFLENEVKKTS 360

Query: 361  FPPTEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCILQAYTGRRKSDNRDDFRNKRFELA 420
            FPP EKIEDCLNLYLFASLKGLKQKCRFLGYMVKC+LQAYTGRRK DNRDDFRNKRFELA
Sbjct: 361  FPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELA 420

Query: 421  GELLEREIKVHIAHARRRMEKALQRDLYGDREVRPIEHYLDASIITNGLSRAFSTGAWAH 480
            GELLEREIKVHIAHARRRMEKALQRDLYGDR+VRPIEHY DASIITNGLSRAFSTGAWAH
Sbjct: 421  GELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYFDASIITNGLSRAFSTGAWAH 480

Query: 481  PFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTP 540
             FKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTP
Sbjct: 481  SFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTP 540

Query: 541  DGENCGLIKNMSITGLVSLNTLKPIVPTLFRCGMENLVDDTFTPLSGSYKIFLNGEWVGI 600
            DGENCGLIKN+SITGLVSLNTLKP+VPTLFRCGMEN+VDDT T LSG ++IFLNGEWVG+
Sbjct: 541  DGENCGLIKNLSITGLVSLNTLKPVVPTLFRCGMENMVDDTSTSLSGKHRIFLNGEWVGV 600

Query: 601  CADSVSFVTKLRRKRRRNQSLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKS 660
            C DS+SFVTK+RRKRRRN  LHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLN+IDKS
Sbjct: 601  CEDSLSFVTKVRRKRRRNLLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNRIDKS 660

Query: 661  KGENNTFQSLLDKGIIELIGTEEEEDCRTAWGIKYLMENEGTTKYSHCELDMSFLLGLSC 720
            KGE+ TFQSLLDKGIIELIGTEEEEDCRTAW IK+L E++GT+KY+HCELD SFLLGLSC
Sbjct: 661  KGESYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTEDQGTSKYTHCELDTSFLLGLSC 720

Query: 721  GLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMNADCL 780
            GLVPFANHDHARR L+QSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTM ADCL
Sbjct: 721  GLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCL 780

Query: 781  GTPGYLSSHSGISPRPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSY 840
            GTPGYLSSH+GI P+PEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH RSY
Sbjct: 781  GTPGYLSSHTGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHTRSY 840

Query: 841  KADVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES 900
            KA+VDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES
Sbjct: 841  KAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES 900

Query: 901  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFL 960
            GADHSIKLKHTEKGMVQKVVLSSNDDGKN+AVV LRQVRSPCLGDKFSSMHGQKGVLGFL
Sbjct: 901  GADHSIKLKHTEKGMVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFL 960

Query: 961  ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVD 1020
            ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA+GGSLKYATPFSTPSVD
Sbjct: 961  ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSLKYATPFSTPSVD 1020

Query: 1021 AITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHP 1080
            AITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHP
Sbjct: 1021 AITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHP 1080

Query: 1081 LTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVI 1140
            LTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVA+VI
Sbjct: 1081 LTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVANVI 1140

Query: 1141 QRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1194
            QRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQ+C
Sbjct: 1141 QRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQVC 1193

BLAST of MC11g0405 vs. NCBI nr
Match: XP_022940261.1 (DNA-directed RNA polymerases IV and V subunit 2-like [Cucurbita moschata] >XP_022940262.1 DNA-directed RNA polymerases IV and V subunit 2-like [Cucurbita moschata])

HSP 1 Score: 2288 bits (5928), Expect = 0.0
Identity = 1122/1194 (93.97%), Postives = 1166/1194 (97.65%), Query Frame = 0

Query: 1    MGTSSGAKDDIEMNSEAEYYSPGTDMDTDDDDYSEAVNIREIGEGFLKDFCKKASMAFFN 60
            MGTS GAKDDIEMNSE E  SPGTDMDTDDDDYSE VNI ++GE FLKDFCKK+SMAFFN
Sbjct: 1    MGTS-GAKDDIEMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGETFLKDFCKKSSMAFFN 60

Query: 61   EYGLISHQINSYNDFIESGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDK 120
            EYGLISHQ+NSYNDFI+SG+QK+FDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDK
Sbjct: 61   EYGLISHQLNSYNDFIKSGIQKSFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDK 120

Query: 121  PKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDK 180
            PKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTG+DQYVDK
Sbjct: 121  PKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGQDQYVDK 180

Query: 181  DLLSQDNREIFIGRLPVMVNSDLCWMKEEQKRDCEFDHGGYFLIKGAEKIFIAQEQICLR 240
            DLLSQDNR+IFIGRLPVMVNSDLCWMK++QKRDCEFDHGGYFLIKGAEKIFIAQEQICLR
Sbjct: 181  DLLSQDNRDIFIGRLPVMVNSDLCWMKDDQKRDCEFDHGGYFLIKGAEKIFIAQEQICLR 240

Query: 241  RLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA 300
            RLWISN QGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA
Sbjct: 241  RLWISNNQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA 300

Query: 301  LGVSSDKEVVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKKALNYLDNEIKKTS 360
            LGVSSD+E+VDLID+GR+DPTVLNILFASVR VDNDDKWKDFRRGK+ALN+L+NE+KKTS
Sbjct: 301  LGVSSDREIVDLIDFGREDPTVLNILFASVRVVDNDDKWKDFRRGKRALNFLENEVKKTS 360

Query: 361  FPPTEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCILQAYTGRRKSDNRDDFRNKRFELA 420
            FPP EKIEDCLNLYLFASLKGLKQKCRFLGYMVKC+LQAYTGRRK DNRDDFRNKRFELA
Sbjct: 361  FPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELA 420

Query: 421  GELLEREIKVHIAHARRRMEKALQRDLYGDREVRPIEHYLDASIITNGLSRAFSTGAWAH 480
            GELLEREIKVHIAHARRRMEKALQRDLYGDR+VRPIEHY DASIITNGLSRAFSTGAWAH
Sbjct: 421  GELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYFDASIITNGLSRAFSTGAWAH 480

Query: 481  PFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTP 540
             FKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTP
Sbjct: 481  SFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTP 540

Query: 541  DGENCGLIKNMSITGLVSLNTLKPIVPTLFRCGMENLVDDTFTPLSGSYKIFLNGEWVGI 600
            DGENCGLIKN+SITGLVSLNTLKP+VPTLFRCGMEN+VDDT T LSG ++IFLNGEWVG+
Sbjct: 541  DGENCGLIKNLSITGLVSLNTLKPVVPTLFRCGMENVVDDTSTSLSGKHRIFLNGEWVGV 600

Query: 601  CADSVSFVTKLRRKRRRNQSLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKS 660
            C DS+SFVTK+RRKRRRN  LHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLN+IDKS
Sbjct: 601  CEDSLSFVTKVRRKRRRNLLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNRIDKS 660

Query: 661  KGENNTFQSLLDKGIIELIGTEEEEDCRTAWGIKYLMENEGTTKYSHCELDMSFLLGLSC 720
            KGE+ TFQSLLDKGIIELIGTEEEEDCRTAW IK+L E++GT+KY+HCELD SFLLGLSC
Sbjct: 661  KGESYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTEDQGTSKYTHCELDTSFLLGLSC 720

Query: 721  GLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMNADCL 780
            GLVPFANHDHARR L+QSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTM ADCL
Sbjct: 721  GLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCL 780

Query: 781  GTPGYLSSHSGISPRPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSY 840
            GTPGYLSSH+GI P+PEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH RSY
Sbjct: 781  GTPGYLSSHTGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHTRSY 840

Query: 841  KADVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES 900
            KA+VDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES
Sbjct: 841  KAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES 900

Query: 901  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFL 960
            GADHSIKLKHTEKGMVQKVVLSSNDDGKN+AVV LRQVRSPCLGDKFSSMHGQKGVLGFL
Sbjct: 901  GADHSIKLKHTEKGMVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFL 960

Query: 961  ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVD 1020
            ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA+GGSLKYATPFSTPSVD
Sbjct: 961  ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSLKYATPFSTPSVD 1020

Query: 1021 AITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHP 1080
            AITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHP
Sbjct: 1021 AITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHP 1080

Query: 1081 LTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVI 1140
            LTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVA+VI
Sbjct: 1081 LTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVANVI 1140

Query: 1141 QRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1194
            QRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQ+C
Sbjct: 1141 QRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQVC 1193

BLAST of MC11g0405 vs. NCBI nr
Match: KAG7037651.1 (DNA-directed RNA polymerases IV and V subunit 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 2284 bits (5920), Expect = 0.0
Identity = 1121/1194 (93.89%), Postives = 1165/1194 (97.57%), Query Frame = 0

Query: 1    MGTSSGAKDDIEMNSEAEYYSPGTDMDTDDDDYSEAVNIREIGEGFLKDFCKKASMAFFN 60
            MGTS GAKDDIEMNSE E  SPGTDMDTDDDDYSE VNI ++GE FLKDFCKK+SMAFFN
Sbjct: 1    MGTS-GAKDDIEMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGETFLKDFCKKSSMAFFN 60

Query: 61   EYGLISHQINSYNDFIESGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDK 120
            EYGLISHQ+NSYNDFI+SG+QK+FDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDK
Sbjct: 61   EYGLISHQLNSYNDFIKSGIQKSFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDK 120

Query: 121  PKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDK 180
            PKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTG+DQYVDK
Sbjct: 121  PKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGQDQYVDK 180

Query: 181  DLLSQDNREIFIGRLPVMVNSDLCWMKEEQKRDCEFDHGGYFLIKGAEKIFIAQEQICLR 240
            DLLSQDNR+IFIGRLPVMVNSDLCWMK++QKRDCEFD GGYFLIKGAEKIFIAQEQICLR
Sbjct: 181  DLLSQDNRDIFIGRLPVMVNSDLCWMKDDQKRDCEFDRGGYFLIKGAEKIFIAQEQICLR 240

Query: 241  RLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA 300
            RLWISN QGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA
Sbjct: 241  RLWISNNQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA 300

Query: 301  LGVSSDKEVVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKKALNYLDNEIKKTS 360
            LGVSSD+E+VDLID+GR+DPTVLNILFASVR VDNDDKWKDFRRGK+ALN+L+NE+KKTS
Sbjct: 301  LGVSSDREIVDLIDFGREDPTVLNILFASVRVVDNDDKWKDFRRGKRALNFLENEVKKTS 360

Query: 361  FPPTEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCILQAYTGRRKSDNRDDFRNKRFELA 420
            FPP EKIEDCLNLYLFASLKGLKQKCRFLGYMVKC+LQAYTGRRK DNRDDFRNKRFELA
Sbjct: 361  FPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELA 420

Query: 421  GELLEREIKVHIAHARRRMEKALQRDLYGDREVRPIEHYLDASIITNGLSRAFSTGAWAH 480
            GELLEREIKVHIAHARRRMEKALQRDLYGDR+VRPIEHY DASIITNGLSRAFSTGAWAH
Sbjct: 421  GELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYFDASIITNGLSRAFSTGAWAH 480

Query: 481  PFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTP 540
             FKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTP
Sbjct: 481  SFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTP 540

Query: 541  DGENCGLIKNMSITGLVSLNTLKPIVPTLFRCGMENLVDDTFTPLSGSYKIFLNGEWVGI 600
            DGENCGLIKN+SITGLVSLNTLKP+VPTLFRCGMEN+VDDT T LSG ++IFLNGEWVG+
Sbjct: 541  DGENCGLIKNLSITGLVSLNTLKPVVPTLFRCGMENVVDDTSTSLSGKHRIFLNGEWVGV 600

Query: 601  CADSVSFVTKLRRKRRRNQSLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKS 660
            C DS+SFVTK+RRKRRRN  LHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLN+IDKS
Sbjct: 601  CEDSLSFVTKVRRKRRRNLLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNRIDKS 660

Query: 661  KGENNTFQSLLDKGIIELIGTEEEEDCRTAWGIKYLMENEGTTKYSHCELDMSFLLGLSC 720
            KGE+ TFQSLLDKGIIELIGTEEEEDCRTAW IK+L E++GT+KY+HCELD SFLLGLSC
Sbjct: 661  KGESYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTEDQGTSKYTHCELDTSFLLGLSC 720

Query: 721  GLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMNADCL 780
            GLVPFANHDHARR L+QSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTM ADCL
Sbjct: 721  GLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCL 780

Query: 781  GTPGYLSSHSGISPRPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSY 840
            GTPGYLSSH+GI P+PEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH RSY
Sbjct: 781  GTPGYLSSHTGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHTRSY 840

Query: 841  KADVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES 900
            KA+VDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES
Sbjct: 841  KAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES 900

Query: 901  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFL 960
            GADHSIKLKHTEKGMVQKVVLSSNDDGKN+AVV LRQVRSPCLGDKFSSMHGQKGVLGFL
Sbjct: 901  GADHSIKLKHTEKGMVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFL 960

Query: 961  ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVD 1020
            ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA+GGSLKYATPFSTPSVD
Sbjct: 961  ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSLKYATPFSTPSVD 1020

Query: 1021 AITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHP 1080
            AITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHP
Sbjct: 1021 AITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHP 1080

Query: 1081 LTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVI 1140
            LTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVA+VI
Sbjct: 1081 LTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVANVI 1140

Query: 1141 QRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1194
            QRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQ+C
Sbjct: 1141 QRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQVC 1193

BLAST of MC11g0405 vs. ExPASy TrEMBL
Match: A0A6J1C950 (DNA-directed RNA polymerase subunit beta OS=Momordica charantia OX=3673 GN=LOC111009271 PE=3 SV=1)

HSP 1 Score: 2413 bits (6253), Expect = 0.0
Identity = 1194/1194 (100.00%), Postives = 1194/1194 (100.00%), Query Frame = 0

Query: 1    MGTSSGAKDDIEMNSEAEYYSPGTDMDTDDDDYSEAVNIREIGEGFLKDFCKKASMAFFN 60
            MGTSSGAKDDIEMNSEAEYYSPGTDMDTDDDDYSEAVNIREIGEGFLKDFCKKASMAFFN
Sbjct: 1    MGTSSGAKDDIEMNSEAEYYSPGTDMDTDDDDYSEAVNIREIGEGFLKDFCKKASMAFFN 60

Query: 61   EYGLISHQINSYNDFIESGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDK 120
            EYGLISHQINSYNDFIESGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDK
Sbjct: 61   EYGLISHQINSYNDFIESGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDK 120

Query: 121  PKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDK 180
            PKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDK
Sbjct: 121  PKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDK 180

Query: 181  DLLSQDNREIFIGRLPVMVNSDLCWMKEEQKRDCEFDHGGYFLIKGAEKIFIAQEQICLR 240
            DLLSQDNREIFIGRLPVMVNSDLCWMKEEQKRDCEFDHGGYFLIKGAEKIFIAQEQICLR
Sbjct: 181  DLLSQDNREIFIGRLPVMVNSDLCWMKEEQKRDCEFDHGGYFLIKGAEKIFIAQEQICLR 240

Query: 241  RLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA 300
            RLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA
Sbjct: 241  RLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA 300

Query: 301  LGVSSDKEVVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKKALNYLDNEIKKTS 360
            LGVSSDKEVVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKKALNYLDNEIKKTS
Sbjct: 301  LGVSSDKEVVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKKALNYLDNEIKKTS 360

Query: 361  FPPTEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCILQAYTGRRKSDNRDDFRNKRFELA 420
            FPPTEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCILQAYTGRRKSDNRDDFRNKRFELA
Sbjct: 361  FPPTEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCILQAYTGRRKSDNRDDFRNKRFELA 420

Query: 421  GELLEREIKVHIAHARRRMEKALQRDLYGDREVRPIEHYLDASIITNGLSRAFSTGAWAH 480
            GELLEREIKVHIAHARRRMEKALQRDLYGDREVRPIEHYLDASIITNGLSRAFSTGAWAH
Sbjct: 421  GELLEREIKVHIAHARRRMEKALQRDLYGDREVRPIEHYLDASIITNGLSRAFSTGAWAH 480

Query: 481  PFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTP 540
            PFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTP
Sbjct: 481  PFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTP 540

Query: 541  DGENCGLIKNMSITGLVSLNTLKPIVPTLFRCGMENLVDDTFTPLSGSYKIFLNGEWVGI 600
            DGENCGLIKNMSITGLVSLNTLKPIVPTLFRCGMENLVDDTFTPLSGSYKIFLNGEWVGI
Sbjct: 541  DGENCGLIKNMSITGLVSLNTLKPIVPTLFRCGMENLVDDTFTPLSGSYKIFLNGEWVGI 600

Query: 601  CADSVSFVTKLRRKRRRNQSLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKS 660
            CADSVSFVTKLRRKRRRNQSLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKS
Sbjct: 601  CADSVSFVTKLRRKRRRNQSLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKS 660

Query: 661  KGENNTFQSLLDKGIIELIGTEEEEDCRTAWGIKYLMENEGTTKYSHCELDMSFLLGLSC 720
            KGENNTFQSLLDKGIIELIGTEEEEDCRTAWGIKYLMENEGTTKYSHCELDMSFLLGLSC
Sbjct: 661  KGENNTFQSLLDKGIIELIGTEEEEDCRTAWGIKYLMENEGTTKYSHCELDMSFLLGLSC 720

Query: 721  GLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMNADCL 780
            GLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMNADCL
Sbjct: 721  GLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMNADCL 780

Query: 781  GTPGYLSSHSGISPRPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSY 840
            GTPGYLSSHSGISPRPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSY
Sbjct: 781  GTPGYLSSHSGISPRPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSY 840

Query: 841  KADVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES 900
            KADVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES
Sbjct: 841  KADVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES 900

Query: 901  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFL 960
            GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFL
Sbjct: 901  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFL 960

Query: 961  ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVD 1020
            ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVD
Sbjct: 961  ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVD 1020

Query: 1021 AITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHP 1080
            AITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHP
Sbjct: 1021 AITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHP 1080

Query: 1081 LTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVI 1140
            LTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVI
Sbjct: 1081 LTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVI 1140

Query: 1141 QRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1194
            QRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC
Sbjct: 1141 QRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1194

BLAST of MC11g0405 vs. ExPASy TrEMBL
Match: A0A6J1FHZ2 (DNA-directed RNA polymerase subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111445938 PE=3 SV=1)

HSP 1 Score: 2288 bits (5928), Expect = 0.0
Identity = 1122/1194 (93.97%), Postives = 1166/1194 (97.65%), Query Frame = 0

Query: 1    MGTSSGAKDDIEMNSEAEYYSPGTDMDTDDDDYSEAVNIREIGEGFLKDFCKKASMAFFN 60
            MGTS GAKDDIEMNSE E  SPGTDMDTDDDDYSE VNI ++GE FLKDFCKK+SMAFFN
Sbjct: 1    MGTS-GAKDDIEMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGETFLKDFCKKSSMAFFN 60

Query: 61   EYGLISHQINSYNDFIESGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDK 120
            EYGLISHQ+NSYNDFI+SG+QK+FDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDK
Sbjct: 61   EYGLISHQLNSYNDFIKSGIQKSFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDK 120

Query: 121  PKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDK 180
            PKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTG+DQYVDK
Sbjct: 121  PKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGQDQYVDK 180

Query: 181  DLLSQDNREIFIGRLPVMVNSDLCWMKEEQKRDCEFDHGGYFLIKGAEKIFIAQEQICLR 240
            DLLSQDNR+IFIGRLPVMVNSDLCWMK++QKRDCEFDHGGYFLIKGAEKIFIAQEQICLR
Sbjct: 181  DLLSQDNRDIFIGRLPVMVNSDLCWMKDDQKRDCEFDHGGYFLIKGAEKIFIAQEQICLR 240

Query: 241  RLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA 300
            RLWISN QGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA
Sbjct: 241  RLWISNNQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA 300

Query: 301  LGVSSDKEVVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKKALNYLDNEIKKTS 360
            LGVSSD+E+VDLID+GR+DPTVLNILFASVR VDNDDKWKDFRRGK+ALN+L+NE+KKTS
Sbjct: 301  LGVSSDREIVDLIDFGREDPTVLNILFASVRVVDNDDKWKDFRRGKRALNFLENEVKKTS 360

Query: 361  FPPTEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCILQAYTGRRKSDNRDDFRNKRFELA 420
            FPP EKIEDCLNLYLFASLKGLKQKCRFLGYMVKC+LQAYTGRRK DNRDDFRNKRFELA
Sbjct: 361  FPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELA 420

Query: 421  GELLEREIKVHIAHARRRMEKALQRDLYGDREVRPIEHYLDASIITNGLSRAFSTGAWAH 480
            GELLEREIKVHIAHARRRMEKALQRDLYGDR+VRPIEHY DASIITNGLSRAFSTGAWAH
Sbjct: 421  GELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYFDASIITNGLSRAFSTGAWAH 480

Query: 481  PFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTP 540
             FKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTP
Sbjct: 481  SFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTP 540

Query: 541  DGENCGLIKNMSITGLVSLNTLKPIVPTLFRCGMENLVDDTFTPLSGSYKIFLNGEWVGI 600
            DGENCGLIKN+SITGLVSLNTLKP+VPTLFRCGMEN+VDDT T LSG ++IFLNGEWVG+
Sbjct: 541  DGENCGLIKNLSITGLVSLNTLKPVVPTLFRCGMENVVDDTSTSLSGKHRIFLNGEWVGV 600

Query: 601  CADSVSFVTKLRRKRRRNQSLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKS 660
            C DS+SFVTK+RRKRRRN  LHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLN+IDKS
Sbjct: 601  CEDSLSFVTKVRRKRRRNLLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNRIDKS 660

Query: 661  KGENNTFQSLLDKGIIELIGTEEEEDCRTAWGIKYLMENEGTTKYSHCELDMSFLLGLSC 720
            KGE+ TFQSLLDKGIIELIGTEEEEDCRTAW IK+L E++GT+KY+HCELD SFLLGLSC
Sbjct: 661  KGESYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTEDQGTSKYTHCELDTSFLLGLSC 720

Query: 721  GLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMNADCL 780
            GLVPFANHDHARR L+QSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTM ADCL
Sbjct: 721  GLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCL 780

Query: 781  GTPGYLSSHSGISPRPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSY 840
            GTPGYLSSH+GI P+PEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH RSY
Sbjct: 781  GTPGYLSSHTGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHTRSY 840

Query: 841  KADVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES 900
            KA+VDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES
Sbjct: 841  KAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES 900

Query: 901  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFL 960
            GADHSIKLKHTEKGMVQKVVLSSNDDGKN+AVV LRQVRSPCLGDKFSSMHGQKGVLGFL
Sbjct: 901  GADHSIKLKHTEKGMVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFL 960

Query: 961  ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVD 1020
            ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA+GGSLKYATPFSTPSVD
Sbjct: 961  ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSLKYATPFSTPSVD 1020

Query: 1021 AITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHP 1080
            AITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHP
Sbjct: 1021 AITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHP 1080

Query: 1081 LTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVI 1140
            LTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVA+VI
Sbjct: 1081 LTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVANVI 1140

Query: 1141 QRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1194
            QRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQ+C
Sbjct: 1141 QRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQVC 1193

BLAST of MC11g0405 vs. ExPASy TrEMBL
Match: A0A6J1IXN3 (DNA-directed RNA polymerase subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111480863 PE=3 SV=1)

HSP 1 Score: 2283 bits (5915), Expect = 0.0
Identity = 1120/1194 (93.80%), Postives = 1165/1194 (97.57%), Query Frame = 0

Query: 1    MGTSSGAKDDIEMNSEAEYYSPGTDMDTDDDDYSEAVNIREIGEGFLKDFCKKASMAFFN 60
            MGTS GAKDDIEMNSE E  SPGTDMDTDDDDYSE VNI ++GE FLKDFCKK+SMAFF+
Sbjct: 1    MGTS-GAKDDIEMNSEPEDLSPGTDMDTDDDDYSEPVNIHDLGEVFLKDFCKKSSMAFFD 60

Query: 61   EYGLISHQINSYNDFIESGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDK 120
            EYGLISHQ+NSYNDFI+SG+QK+FDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDK
Sbjct: 61   EYGLISHQLNSYNDFIKSGIQKSFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDK 120

Query: 121  PKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDK 180
            PKFWGGAASGKEYN+LPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTG+DQYVDK
Sbjct: 121  PKFWGGAASGKEYNLLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGQDQYVDK 180

Query: 181  DLLSQDNREIFIGRLPVMVNSDLCWMKEEQKRDCEFDHGGYFLIKGAEKIFIAQEQICLR 240
            DLLSQDNR+IFIGRLPVMVNSDLCWMK++QKRDCEFDHGGYFLIKGAEKIFIAQEQICLR
Sbjct: 181  DLLSQDNRDIFIGRLPVMVNSDLCWMKDDQKRDCEFDHGGYFLIKGAEKIFIAQEQICLR 240

Query: 241  RLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA 300
            RLWISN QGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA
Sbjct: 241  RLWISNNQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFA 300

Query: 301  LGVSSDKEVVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKKALNYLDNEIKKTS 360
            LGVSSD+E+VDLID+GR+DPTVLNILFASVR VDNDDKWKDFRRGK+ALN+L+NE+KKTS
Sbjct: 301  LGVSSDREIVDLIDFGREDPTVLNILFASVRVVDNDDKWKDFRRGKRALNFLENEVKKTS 360

Query: 361  FPPTEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCILQAYTGRRKSDNRDDFRNKRFELA 420
            FPP EKIEDCLNLYLFASLKGLKQKCRFLGYMVKC+LQAYTGRRK DNRDDFRNKRFELA
Sbjct: 361  FPPAEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELA 420

Query: 421  GELLEREIKVHIAHARRRMEKALQRDLYGDREVRPIEHYLDASIITNGLSRAFSTGAWAH 480
            GELLEREIKVHIAHARRRMEKALQRDLYGDR+VRPIEHY DASIITNGLSRAFSTGAWAH
Sbjct: 421  GELLEREIKVHIAHARRRMEKALQRDLYGDRDVRPIEHYFDASIITNGLSRAFSTGAWAH 480

Query: 481  PFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTP 540
             FKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTP
Sbjct: 481  SFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTP 540

Query: 541  DGENCGLIKNMSITGLVSLNTLKPIVPTLFRCGMENLVDDTFTPLSGSYKIFLNGEWVGI 600
            DGENCGLIKN+SITGLVSLNTLKP+VPTLFRCGMEN+VDDT T LSG +KIFLNGEWVG+
Sbjct: 541  DGENCGLIKNLSITGLVSLNTLKPVVPTLFRCGMENVVDDTSTSLSGKHKIFLNGEWVGV 600

Query: 601  CADSVSFVTKLRRKRRRNQSLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKS 660
            C DS+SFVTK+R KRRRN  LHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLN+IDKS
Sbjct: 601  CEDSLSFVTKVRLKRRRNLLLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNRIDKS 660

Query: 661  KGENNTFQSLLDKGIIELIGTEEEEDCRTAWGIKYLMENEGTTKYSHCELDMSFLLGLSC 720
            KGE+ TFQSLLDKGIIELIGTEEEEDCRTAW IK+L E++GT+KY+HCELD SFLLGLSC
Sbjct: 661  KGESYTFQSLLDKGIIELIGTEEEEDCRTAWSIKHLTEDQGTSKYTHCELDTSFLLGLSC 720

Query: 721  GLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMNADCL 780
            GLVPFANHDHARR L+QSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTM ADCL
Sbjct: 721  GLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMTADCL 780

Query: 781  GTPGYLSSHSGISPRPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSY 840
            GTPGYLSSH+GI P+PEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH RSY
Sbjct: 781  GTPGYLSSHTGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHTRSY 840

Query: 841  KADVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES 900
            KA+VDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES
Sbjct: 841  KAEVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAES 900

Query: 901  GADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFL 960
            GADHSIKLKHTEKGMVQKVVLSSNDDGKN+AVV LRQVRSPCLGDKFSSMHGQKGVLGFL
Sbjct: 901  GADHSIKLKHTEKGMVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFL 960

Query: 961  ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVD 1020
            ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIA+GGSLKYATPFSTPSVD
Sbjct: 961  ESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIASGGSLKYATPFSTPSVD 1020

Query: 1021 AITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHP 1080
            AITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHP
Sbjct: 1021 AITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHP 1080

Query: 1081 LTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVI 1140
            LTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVA+VI
Sbjct: 1081 LTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVANVI 1140

Query: 1141 QRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1194
            QRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQ+C
Sbjct: 1141 QRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQVC 1193

BLAST of MC11g0405 vs. ExPASy TrEMBL
Match: A0A5D3D8Y5 (DNA-directed RNA polymerase subunit beta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G001250 PE=3 SV=1)

HSP 1 Score: 2254 bits (5840), Expect = 0.0
Identity = 1107/1198 (92.40%), Postives = 1155/1198 (96.41%), Query Frame = 0

Query: 1    MGTSSGAKDDIEMNSEAEYYSPGTDMDTDDDD--YSEAVNIREIGEGFLKDFCKKASMAF 60
            MGTS G KDDIEMNSE E  SPG D+DTDDDD  YSE VNI ++GE FLKDFCKK+SMAF
Sbjct: 1    MGTS-GTKDDIEMNSEGEDLSPGMDLDTDDDDDYYSEPVNINDLGEAFLKDFCKKSSMAF 60

Query: 61   FNEYGLISHQINSYNDFIESGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTL 120
            FN+YGLISHQINSYNDFI++G+QKAFD+FG+I+VQPGYDPSKKGDGEWRYASVKFGKVTL
Sbjct: 61   FNQYGLISHQINSYNDFIKNGVQKAFDFFGDILVQPGYDPSKKGDGEWRYASVKFGKVTL 120

Query: 121  DKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYV 180
            DKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMK+NI++E+YTQ+LV SDKFKTGKDQYV
Sbjct: 121  DKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKINISLEIYTQKLVSSDKFKTGKDQYV 180

Query: 181  DKDLL--SQDNREIFIGRLPVMVNSDLCWMKEEQKRDCEFDHGGYFLIKGAEKIFIAQEQ 240
            DK+ +  + DNR++FIGRLPVMVNSDLCWMK+EQKRDCEFD GGYFLIKGAEKIFIAQEQ
Sbjct: 181  DKEPVEGASDNRDVFIGRLPVMVNSDLCWMKDEQKRDCEFDRGGYFLIKGAEKIFIAQEQ 240

Query: 241  ICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWI 300
            ICLRRLWISN+QGWTVAYRSEVKRNRLIIRLVENSKSE+LKSKEKVLNVYFLSTE+PVWI
Sbjct: 241  ICLRRLWISNVQGWTVAYRSEVKRNRLIIRLVENSKSEDLKSKEKVLNVYFLSTEVPVWI 300

Query: 301  LFFALGVSSDKEVVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKKALNYLDNEI 360
            LFFALGVSSDKE+VDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRGK+AL +LDNEI
Sbjct: 301  LFFALGVSSDKEIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKRALTFLDNEI 360

Query: 361  KKTSFPPTEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCILQAYTGRRKSDNRDDFRNKR 420
            +KTSFPP EKIEDCLNLYLFASLKGLKQKC FLGYMVKC+LQAYTGRRK DNRDDFRNKR
Sbjct: 361  RKTSFPPAEKIEDCLNLYLFASLKGLKQKCHFLGYMVKCLLQAYTGRRKCDNRDDFRNKR 420

Query: 421  FELAGELLEREIKVHIAHARRRMEKALQRDLYGDREVRPIEHYLDASIITNGLSRAFSTG 480
            FELA ELLERE+KVHIAHARRRMEKALQRDLYGDR+VRPIEHYLDASIITNGLSRAFSTG
Sbjct: 421  FELAAELLERELKVHIAHARRRMEKALQRDLYGDRQVRPIEHYLDASIITNGLSRAFSTG 480

Query: 481  AWAHPFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCF 540
            AWAH FKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCF
Sbjct: 481  AWAHAFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCF 540

Query: 541  LSTPDGENCGLIKNMSITGLVSLNTLKPIVPTLFRCGMENLVDDTFTPLSGSYKIFLNGE 600
            LSTPDGENCGLIKN+S TGLVSLNT KPI+PTLF CGMENL D+T T L G Y+IFL+GE
Sbjct: 541  LSTPDGENCGLIKNLSGTGLVSLNTTKPIIPTLFCCGMENLADNTSTSLCGKYRIFLDGE 600

Query: 601  WVGICADSVSFVTKLRRKRRRNQSLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNK 660
            WVG+C DS+SFVTK+RRKRRRN  LHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLN+
Sbjct: 601  WVGVCEDSLSFVTKVRRKRRRNPFLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNR 660

Query: 661  IDKSKGENNTFQSLLDKGIIELIGTEEEEDCRTAWGIKYLMENEGTTKYSHCELDMSFLL 720
            IDKSKGEN TFQSLLDKGIIEL+GTEEEEDCR AW IK+LME+EGTTKYSHCELDMSFLL
Sbjct: 661  IDKSKGENYTFQSLLDKGIIELVGTEEEEDCRVAWSIKHLMEDEGTTKYSHCELDMSFLL 720

Query: 721  GLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMN 780
            GLSCGLVPFANHDHARR L+QSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTM 
Sbjct: 721  GLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMT 780

Query: 781  ADCLGTPGYLSSHSGISPRPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH 840
            ADCLGTPGYLSSH+GI P+PEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH
Sbjct: 781  ADCLGTPGYLSSHTGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH 840

Query: 841  IRSYKADVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGR 900
             RSYKA+VDNKESSEKRRKSDD INFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGR
Sbjct: 841  TRSYKAEVDNKESSEKRRKSDDTINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGR 900

Query: 901  CAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGV 960
            CAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVV LRQVRSPCLGDKFSSMHGQKGV
Sbjct: 901  CAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVSLRQVRSPCLGDKFSSMHGQKGV 960

Query: 961  LGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFST 1020
            LGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFST
Sbjct: 961  LGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFST 1020

Query: 1021 PSVDAITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTG 1080
            PSVDAITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTG
Sbjct: 1021 PSVDAITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTG 1080

Query: 1081 PVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNV 1140
            PVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNV
Sbjct: 1081 PVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNV 1140

Query: 1141 ASVIQRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1194
            ASVIQRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC
Sbjct: 1141 ASVIQRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1197

BLAST of MC11g0405 vs. ExPASy TrEMBL
Match: A0A1S3BUT1 (DNA-directed RNA polymerase subunit beta OS=Cucumis melo OX=3656 GN=LOC103493748 PE=3 SV=1)

HSP 1 Score: 2254 bits (5840), Expect = 0.0
Identity = 1107/1198 (92.40%), Postives = 1155/1198 (96.41%), Query Frame = 0

Query: 1    MGTSSGAKDDIEMNSEAEYYSPGTDMDTDDDD--YSEAVNIREIGEGFLKDFCKKASMAF 60
            MGTS G KDDIEMNSE E  SPG D+DTDDDD  YSE VNI ++GE FLKDFCKK+SMAF
Sbjct: 1    MGTS-GTKDDIEMNSEGEDLSPGMDLDTDDDDDYYSEPVNINDLGEAFLKDFCKKSSMAF 60

Query: 61   FNEYGLISHQINSYNDFIESGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTL 120
            FN+YGLISHQINSYNDFI++G+QKAFD+FG+I+VQPGYDPSKKGDGEWRYASVKFGKVTL
Sbjct: 61   FNQYGLISHQINSYNDFIKNGVQKAFDFFGDILVQPGYDPSKKGDGEWRYASVKFGKVTL 120

Query: 121  DKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYV 180
            DKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMK+NI++E+YTQ+LV SDKFKTGKDQYV
Sbjct: 121  DKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKINISLEIYTQKLVSSDKFKTGKDQYV 180

Query: 181  DKDLL--SQDNREIFIGRLPVMVNSDLCWMKEEQKRDCEFDHGGYFLIKGAEKIFIAQEQ 240
            DK+ +  + DNR++FIGRLPVMVNSDLCWMK+EQKRDCEFD GGYFLIKGAEKIFIAQEQ
Sbjct: 181  DKEPVEGASDNRDVFIGRLPVMVNSDLCWMKDEQKRDCEFDRGGYFLIKGAEKIFIAQEQ 240

Query: 241  ICLRRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWI 300
            ICLRRLWISN+QGWTVAYRSEVKRNRLIIRLVENSKSE+LKSKEKVLNVYFLSTE+PVWI
Sbjct: 241  ICLRRLWISNVQGWTVAYRSEVKRNRLIIRLVENSKSEDLKSKEKVLNVYFLSTEVPVWI 300

Query: 301  LFFALGVSSDKEVVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKKALNYLDNEI 360
            LFFALGVSSDKE+VDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRGK+AL +LDNEI
Sbjct: 301  LFFALGVSSDKEIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKRALTFLDNEI 360

Query: 361  KKTSFPPTEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCILQAYTGRRKSDNRDDFRNKR 420
            +KTSFPP EKIEDCLNLYLFASLKGLKQKC FLGYMVKC+LQAYTGRRK DNRDDFRNKR
Sbjct: 361  RKTSFPPAEKIEDCLNLYLFASLKGLKQKCHFLGYMVKCLLQAYTGRRKCDNRDDFRNKR 420

Query: 421  FELAGELLEREIKVHIAHARRRMEKALQRDLYGDREVRPIEHYLDASIITNGLSRAFSTG 480
            FELA ELLERE+KVHIAHARRRMEKALQRDLYGDR+VRPIEHYLDASIITNGLSRAFSTG
Sbjct: 421  FELAAELLERELKVHIAHARRRMEKALQRDLYGDRQVRPIEHYLDASIITNGLSRAFSTG 480

Query: 481  AWAHPFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCF 540
            AWAH FKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCF
Sbjct: 481  AWAHAFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCF 540

Query: 541  LSTPDGENCGLIKNMSITGLVSLNTLKPIVPTLFRCGMENLVDDTFTPLSGSYKIFLNGE 600
            LSTPDGENCGLIKN+S TGLVSLNT KPI+PTLF CGMENL D+T T L G Y+IFL+GE
Sbjct: 541  LSTPDGENCGLIKNLSGTGLVSLNTTKPIIPTLFCCGMENLADNTSTSLCGKYRIFLDGE 600

Query: 601  WVGICADSVSFVTKLRRKRRRNQSLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNK 660
            WVG+C DS+SFVTK+RRKRRRN  LHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLN+
Sbjct: 601  WVGVCEDSLSFVTKVRRKRRRNPFLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNR 660

Query: 661  IDKSKGENNTFQSLLDKGIIELIGTEEEEDCRTAWGIKYLMENEGTTKYSHCELDMSFLL 720
            IDKSKGEN TFQSLLDKGIIEL+GTEEEEDCR AW IK+LME+EGTTKYSHCELDMSFLL
Sbjct: 661  IDKSKGENYTFQSLLDKGIIELVGTEEEEDCRVAWSIKHLMEDEGTTKYSHCELDMSFLL 720

Query: 721  GLSCGLVPFANHDHARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMN 780
            GLSCGLVPFANHDHARR L+QSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTM 
Sbjct: 721  GLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMT 780

Query: 781  ADCLGTPGYLSSHSGISPRPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH 840
            ADCLGTPGYLSSH+GI P+PEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH
Sbjct: 781  ADCLGTPGYLSSHTGILPKPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEH 840

Query: 841  IRSYKADVDNKESSEKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGR 900
             RSYKA+VDNKESSEKRRKSDD INFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGR
Sbjct: 841  TRSYKAEVDNKESSEKRRKSDDTINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGR 900

Query: 901  CAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGV 960
            CAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVV LRQVRSPCLGDKFSSMHGQKGV
Sbjct: 901  CAESGADHSIKLKHTEKGMVQKVVLSSNDDGKNYAVVSLRQVRSPCLGDKFSSMHGQKGV 960

Query: 961  LGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFST 1020
            LGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFST
Sbjct: 961  LGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFST 1020

Query: 1021 PSVDAITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTG 1080
            PSVDAITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTG
Sbjct: 1021 PSVDAITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTG 1080

Query: 1081 PVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNV 1140
            PVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNV
Sbjct: 1081 PVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNV 1140

Query: 1141 ASVIQRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1194
            ASVIQRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC
Sbjct: 1141 ASVIQRSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1197

BLAST of MC11g0405 vs. TAIR 10
Match: AT3G23780.1 (nuclear RNA polymerase D2A )

HSP 1 Score: 1673.3 bits (4332), Expect = 0.0e+00
Identity = 816/1193 (68.40%), Postives = 971/1193 (81.39%), Query Frame = 0

Query: 22   PGTDMDTDDDDYSEA----VNIREIGEGFLKDFCKKASMAFFNEYGLISHQINSYNDFIE 81
            P  D+D  D +  EA    +N+ E+GEGFL+ FCKKA+ +FF++YGLISHQ+NSYN FIE
Sbjct: 2    PDMDIDVKDLEEFEATTGEINLSELGEGFLQSFCKKAATSFFDKYGLISHQLNSYNYFIE 61

Query: 82   SGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLP 141
             GLQ  F  FGE++V+P +D  KK D +WRYA+VKFG+VT++KP F+   +  KE   LP
Sbjct: 62   HGLQNVFQSFGEMLVEPSFDVVKKKDNDWRYATVKFGEVTVEKPTFF---SDDKELEFLP 121

Query: 142  RHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNREIFIGRLPV 201
             HARLQNMTYS+R+K+N+ VEV+   +V+SDKFKTG+D YV+K +L    ++I IG +PV
Sbjct: 122  WHARLQNMTYSARIKVNVQVEVFKNTVVKSDKFKTGQDNYVEKKILDVKKQDILIGSIPV 181

Query: 202  MVNSDLCWMKEE-----QKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTV 261
            MV S LC   E+     +K DC FD GGYF+IKGAEK+FIAQEQ+C +RLWISN   WTV
Sbjct: 182  MVKSILCKTSEKGKENCKKGDCAFDQGGYFVIKGAEKVFIAQEQMCTKRLWISN-SPWTV 241

Query: 262  AYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDKEVVDL 321
            ++RSE KRNR I+RL EN K+E+ K +EKVL VYFLSTEIPVW+LFFALGVSSDKE +DL
Sbjct: 242  SFRSENKRNRFIVRLSENEKAEDYKRREKVLTVYFLSTEIPVWLLFFALGVSSDKEAMDL 301

Query: 322  IDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKKALNYLDNEIKKTSFPPTEKIEDCLN 381
            I +  DD ++ N L AS+     D   + FR G  AL Y++ +IK T FPP E +++CL+
Sbjct: 302  IAFDGDDASITNSLIASIHVA--DAVCEAFRCGNNALTYVEQQIKSTKFPPAESVDECLH 361

Query: 382  LYLFASLKGLKQKCRFLGYMVKCILQAYTGRRKSDNRDDFRNKRFELAGELLEREIKVHI 441
            LYLF  L+ LK+K RFLGYMVKC+L +Y G+RK +NRD FRNKR ELAGELLEREI+VH+
Sbjct: 362  LYLFPGLQSLKKKARFLGYMVKCLLNSYAGKRKCENRDSFRNKRIELAGELLEREIRVHL 421

Query: 442  AHARRRMEKALQRDLYGDREVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVV 501
            AHARR+M +A+Q+ L GD +++PIEHYLDAS+ITNGLSRAFSTGAW+HPF++MER+SGVV
Sbjct: 422  AHARRKMTRAMQKHLSGDGDLKPIEHYLDASVITNGLSRAFSTGAWSHPFRKMERVSGVV 481

Query: 502  ATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMS 561
            A LGRANPLQT+ +LRRTRQQV YTGKVGDARYPHPSHWGRVCFLSTPDGENCGL+KNMS
Sbjct: 482  ANLGRANPLQTLIDLRRTRQQVLYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNMS 541

Query: 562  ITGLVSLNTLKPIVPTLFRCGMENLVDDTFTPLSGSYKIFLNGEWVGICADSVSFVTKLR 621
            + GLVS  +L+ +V  LF CGME L+DDT TPL G +K+ LNG+WVG+CADS SFV +L+
Sbjct: 542  LLGLVSTQSLESVVEKLFACGMEELMDDTCTPLFGKHKVLLNGDWVGLCADSESFVAELK 601

Query: 622  RKRRRNQSLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENNTFQSLLD 681
             +RR+++   ++E+KRD+   EVRIF+DAGR+LRPLLVVENL K+ + K     F  LLD
Sbjct: 602  SRRRQSELPREMEIKRDKDDNEVRIFTDAGRLLRPLLVVENLQKLKQEKPSQYPFDHLLD 661

Query: 682  KGIIELIGTEEEEDCRTAWGIKYLMENEGTTKYSHCELDMSFLLGLSCGLVPFANHDHAR 741
             GI+ELIG EEEEDC TAWGIK L++      Y+HCELD+SFLLG+SC +VPFANHDH R
Sbjct: 662  HGILELIGIEEEEDCNTAWGIKQLLKEPKI--YTHCELDLSFLLGVSCAVVPFANHDHGR 721

Query: 742  RVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMNADCLGTPGYLSSHSGI 801
            RVLYQSQKH  QAIGFS+TN N R DTLS QL YPQ+PLF+T+ ++CL            
Sbjct: 722  RVLYQSQKHCQQAIGFSSTNPNIRCDTLSQQLFYPQKPLFKTLASECL------------ 781

Query: 802  SPRPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNKESSEK 861
              +   +NGQNAIVAVNVHLGYNQEDS+VMN+ASLERGMFRSE IRSYKA+VD K+ SEK
Sbjct: 782  -KKEVLFNGQNAIVAVNVHLGYNQEDSIVMNKASLERGMFRSEQIRSYKAEVDAKD-SEK 841

Query: 862  RRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTE 921
            R+K D+ + FGKT SKIG+VDSL+DDGFP+IGAN+ +GDIVIGRC ESGADHSIKLKHTE
Sbjct: 842  RKKMDELVQFGKTHSKIGKVDSLEDDGFPFIGANMSTGDIVIGRCTESGADHSIKLKHTE 901

Query: 922  KGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQG 981
            +G+VQKVVLSSND+GKN+A V LRQVRSPCLGDKFSSMHGQKGVLG+LE Q+NFPFTIQG
Sbjct: 902  RGIVQKVVLSSNDEGKNFAAVSLRQVRSPCLGDKFSSMHGQKGVLGYLEEQQNFPFTIQG 961

Query: 982  IVPDIVINPHAFPSRQTPGQLLEAALGKGIAA-----GGSLKY------ATPFSTPSVDA 1041
            IVPDIVINPHAFPSRQTPGQLLEAAL KGIA      G S  Y      ATPFSTP V  
Sbjct: 962  IVPDIVINPHAFPSRQTPGQLLEAALSKGIACPIQKEGSSAAYTKLTRHATPFSTPGVTE 1021

Query: 1042 ITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPL 1101
            IT+QLHRAGFSRWG+ERVYNGR+GEMMRS+IFMGPTFYQRL+HM+EDKVKFRNTGPVHPL
Sbjct: 1022 ITEQLHRAGFSRWGNERVYNGRSGEMMRSMIFMGPTFYQRLVHMSEDKVKFRNTGPVHPL 1081

Query: 1102 TRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQ 1161
            TRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMH+C+KCK  A+VI+
Sbjct: 1082 TRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICRKCKTYANVIE 1141

Query: 1162 RSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1195
            R+ + GRKIRGPYCRVC S D +VRV VPYGAKLLCQELFSMGI L F+T+LC
Sbjct: 1142 RTPSSGRKIRGPYCRVCVSSDHVVRVYVPYGAKLLCQELFSMGITLNFDTKLC 1172

BLAST of MC11g0405 vs. TAIR 10
Match: AT3G23780.2 (nuclear RNA polymerase D2A )

HSP 1 Score: 1673.3 bits (4332), Expect = 0.0e+00
Identity = 816/1193 (68.40%), Postives = 971/1193 (81.39%), Query Frame = 0

Query: 22   PGTDMDTDDDDYSEA----VNIREIGEGFLKDFCKKASMAFFNEYGLISHQINSYNDFIE 81
            P  D+D  D +  EA    +N+ E+GEGFL+ FCKKA+ +FF++YGLISHQ+NSYN FIE
Sbjct: 2    PDMDIDVKDLEEFEATTGEINLSELGEGFLQSFCKKAATSFFDKYGLISHQLNSYNYFIE 61

Query: 82   SGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVTLDKPKFWGGAASGKEYNMLP 141
             GLQ  F  FGE++V+P +D  KK D +WRYA+VKFG+VT++KP F+   +  KE   LP
Sbjct: 62   HGLQNVFQSFGEMLVEPSFDVVKKKDNDWRYATVKFGEVTVEKPTFF---SDDKELEFLP 121

Query: 142  RHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNREIFIGRLPV 201
             HARLQNMTYS+R+K+N+ VEV+   +V+SDKFKTG+D YV+K +L    ++I IG +PV
Sbjct: 122  WHARLQNMTYSARIKVNVQVEVFKNTVVKSDKFKTGQDNYVEKKILDVKKQDILIGSIPV 181

Query: 202  MVNSDLCWMKEE-----QKRDCEFDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTV 261
            MV S LC   E+     +K DC FD GGYF+IKGAEK+FIAQEQ+C +RLWISN   WTV
Sbjct: 182  MVKSILCKTSEKGKENCKKGDCAFDQGGYFVIKGAEKVFIAQEQMCTKRLWISN-SPWTV 241

Query: 262  AYRSEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDKEVVDL 321
            ++RSE KRNR I+RL EN K+E+ K +EKVL VYFLSTEIPVW+LFFALGVSSDKE +DL
Sbjct: 242  SFRSENKRNRFIVRLSENEKAEDYKRREKVLTVYFLSTEIPVWLLFFALGVSSDKEAMDL 301

Query: 322  IDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKKALNYLDNEIKKTSFPPTEKIEDCLN 381
            I +  DD ++ N L AS+     D   + FR G  AL Y++ +IK T FPP E +++CL+
Sbjct: 302  IAFDGDDASITNSLIASIHVA--DAVCEAFRCGNNALTYVEQQIKSTKFPPAESVDECLH 361

Query: 382  LYLFASLKGLKQKCRFLGYMVKCILQAYTGRRKSDNRDDFRNKRFELAGELLEREIKVHI 441
            LYLF  L+ LK+K RFLGYMVKC+L +Y G+RK +NRD FRNKR ELAGELLEREI+VH+
Sbjct: 362  LYLFPGLQSLKKKARFLGYMVKCLLNSYAGKRKCENRDSFRNKRIELAGELLEREIRVHL 421

Query: 442  AHARRRMEKALQRDLYGDREVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVV 501
            AHARR+M +A+Q+ L GD +++PIEHYLDAS+ITNGLSRAFSTGAW+HPF++MER+SGVV
Sbjct: 422  AHARRKMTRAMQKHLSGDGDLKPIEHYLDASVITNGLSRAFSTGAWSHPFRKMERVSGVV 481

Query: 502  ATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMS 561
            A LGRANPLQT+ +LRRTRQQV YTGKVGDARYPHPSHWGRVCFLSTPDGENCGL+KNMS
Sbjct: 482  ANLGRANPLQTLIDLRRTRQQVLYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNMS 541

Query: 562  ITGLVSLNTLKPIVPTLFRCGMENLVDDTFTPLSGSYKIFLNGEWVGICADSVSFVTKLR 621
            + GLVS  +L+ +V  LF CGME L+DDT TPL G +K+ LNG+WVG+CADS SFV +L+
Sbjct: 542  LLGLVSTQSLESVVEKLFACGMEELMDDTCTPLFGKHKVLLNGDWVGLCADSESFVAELK 601

Query: 622  RKRRRNQSLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENNTFQSLLD 681
             +RR+++   ++E+KRD+   EVRIF+DAGR+LRPLLVVENL K+ + K     F  LLD
Sbjct: 602  SRRRQSELPREMEIKRDKDDNEVRIFTDAGRLLRPLLVVENLQKLKQEKPSQYPFDHLLD 661

Query: 682  KGIIELIGTEEEEDCRTAWGIKYLMENEGTTKYSHCELDMSFLLGLSCGLVPFANHDHAR 741
             GI+ELIG EEEEDC TAWGIK L++      Y+HCELD+SFLLG+SC +VPFANHDH R
Sbjct: 662  HGILELIGIEEEEDCNTAWGIKQLLKEPKI--YTHCELDLSFLLGVSCAVVPFANHDHGR 721

Query: 742  RVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMNADCLGTPGYLSSHSGI 801
            RVLYQSQKH  QAIGFS+TN N R DTLS QL YPQ+PLF+T+ ++CL            
Sbjct: 722  RVLYQSQKHCQQAIGFSSTNPNIRCDTLSQQLFYPQKPLFKTLASECL------------ 781

Query: 802  SPRPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNKESSEK 861
              +   +NGQNAIVAVNVHLGYNQEDS+VMN+ASLERGMFRSE IRSYKA+VD K+ SEK
Sbjct: 782  -KKEVLFNGQNAIVAVNVHLGYNQEDSIVMNKASLERGMFRSEQIRSYKAEVDAKD-SEK 841

Query: 862  RRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTE 921
            R+K D+ + FGKT SKIG+VDSL+DDGFP+IGAN+ +GDIVIGRC ESGADHSIKLKHTE
Sbjct: 842  RKKMDELVQFGKTHSKIGKVDSLEDDGFPFIGANMSTGDIVIGRCTESGADHSIKLKHTE 901

Query: 922  KGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQG 981
            +G+VQKVVLSSND+GKN+A V LRQVRSPCLGDKFSSMHGQKGVLG+LE Q+NFPFTIQG
Sbjct: 902  RGIVQKVVLSSNDEGKNFAAVSLRQVRSPCLGDKFSSMHGQKGVLGYLEEQQNFPFTIQG 961

Query: 982  IVPDIVINPHAFPSRQTPGQLLEAALGKGIAA-----GGSLKY------ATPFSTPSVDA 1041
            IVPDIVINPHAFPSRQTPGQLLEAAL KGIA      G S  Y      ATPFSTP V  
Sbjct: 962  IVPDIVINPHAFPSRQTPGQLLEAALSKGIACPIQKEGSSAAYTKLTRHATPFSTPGVTE 1021

Query: 1042 ITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPL 1101
            IT+QLHRAGFSRWG+ERVYNGR+GEMMRS+IFMGPTFYQRL+HM+EDKVKFRNTGPVHPL
Sbjct: 1022 ITEQLHRAGFSRWGNERVYNGRSGEMMRSMIFMGPTFYQRLVHMSEDKVKFRNTGPVHPL 1081

Query: 1102 TRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQ 1161
            TRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMH+C+KCK  A+VI+
Sbjct: 1082 TRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICRKCKTYANVIE 1141

Query: 1162 RSVAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1195
            R+ + GRKIRGPYCRVC S D +VRV VPYGAKLLCQELFSMGI L F+T+LC
Sbjct: 1142 RTPSSGRKIRGPYCRVCVSSDHVVRVYVPYGAKLLCQELFSMGITLNFDTKLC 1172

BLAST of MC11g0405 vs. TAIR 10
Match: AT3G18090.1 (nuclear RNA polymerase D2B )

HSP 1 Score: 1537.7 bits (3980), Expect = 0.0e+00
Identity = 746/1071 (69.65%), Postives = 887/1071 (82.82%), Query Frame = 0

Query: 141  RLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNREIFIGRLPVMVN 200
            RLQNMTYS+R+K+N  VEV+ + +++ DKFKTG+D+YV+K++L    ++I IG +PVMV 
Sbjct: 4    RLQNMTYSARIKVNAQVEVFKKIVIKHDKFKTGQDEYVEKEILDVKKQDILIGSIPVMVK 63

Query: 201  SDLCWMKEEQKRDCE-----FDHGGYFLIKGAEKIFIAQEQICLRRLWISNIQGWTVAYR 260
            S LC   E+ K +C+     FD GGYF+IKGAEK+FIAQEQ+C +RLWISN   WTV++R
Sbjct: 64   SVLCKTSEKGKENCKKGNCAFDQGGYFVIKGAEKVFIAQEQMCTKRLWISN-SPWTVSFR 123

Query: 261  SEVKRNRLIIRLVENSKSEELKSKEKVLNVYFLSTEIPVWILFFALGVSSDKEVVDLIDY 320
            SE KRNR I+RL EN K+E+ K  EKVL VYFLSTEIPVW+LFFALGVSSDKE +DLI +
Sbjct: 124  SETKRNRFIVRLSENEKAEDYKIMEKVLTVYFLSTEIPVWLLFFALGVSSDKEAMDLIAF 183

Query: 321  GRDDPTVLNILFASVREVDNDDKWKDFRRGKKALNYLDNEIKKTSFPPTEKIEDCLNLYL 380
              DD ++ N L AS+ E   D   + FR G  AL Y++++IK T FPP E ++DCL LYL
Sbjct: 184  DGDDASITNSLIASIHEA--DAVCEAFRCGNNALTYVEHQIKSTKFPPAESVDDCLRLYL 243

Query: 381  FASLKGLKQKCRFLGYMVKCILQAYTGRRKSDNRDDFRNKRFELAGELLEREIKVHIAHA 440
            F  L+GLK+K RFLGYMVKC+L AY G+RK +NRD FRNKR ELAGELLEREI+VH+AHA
Sbjct: 244  FPCLQGLKKKARFLGYMVKCLLSAYAGKRKCENRDSFRNKRIELAGELLEREIRVHLAHA 303

Query: 441  RRRMEKALQRDLYGDREVRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATL 500
            RR+M +A+Q+ L GD +++PIEHYLDAS+ITNGL+RAFSTGAW+HPF++MER+SGVVA L
Sbjct: 304  RRKMTRAMQKQLSGDGDLKPIEHYLDASVITNGLNRAFSTGAWSHPFRKMERVSGVVANL 363

Query: 501  GRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITG 560
            GRANPLQT+ +LRRTRQQV YTGKVGDAR+PHPSHWGRVCFLSTPDGENCGL+KNMS+ G
Sbjct: 364  GRANPLQTLIDLRRTRQQVLYTGKVGDARHPHPSHWGRVCFLSTPDGENCGLVKNMSLLG 423

Query: 561  LVSLNTLKPIVPTLFRCGMENLVDDTFTPLSGSYKIFLNGEWVGICADSVSFVTKLRRKR 620
            LVS   L+ +V  LF CGME L++DT TPL G +K+ LNG+WVG+CADS SFV +L+ +R
Sbjct: 424  LVSTQGLESVVEMLFTCGMEELMNDTSTPLCGKHKVLLNGDWVGLCADSESFVGELKSRR 483

Query: 621  RRNQSLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNKIDKSKGENNTFQSLLDKGI 680
            R+++   ++E+KRD+   EVRIF+DAGR+LRPLLVVENL+K+ + K     F+ LLD+GI
Sbjct: 484  RQSELPLEMEIKRDKDDNEVRIFTDAGRLLRPLLVVENLHKLKQDKPTQYPFKHLLDQGI 543

Query: 681  IELIGTEEEEDCRTAWGIKYLMENEGTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVL 740
            +ELIG EEEEDC TAWGIK L++      Y+HCELD+SFLLG+SC +VPFANHDH +RVL
Sbjct: 544  LELIGIEEEEDCTTAWGIKQLLKE--PKNYTHCELDLSFLLGVSCAIVPFANHDHGKRVL 603

Query: 741  YQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMNADCLGTPGYLSSHSGISPR 800
            YQSQKH  QAIGFS+TN N R DTLS QL YPQ+PLF+T+ ++CL              +
Sbjct: 604  YQSQKHCQQAIGFSSTNPNIRCDTLSQQLFYPQKPLFKTLASECL-------------EK 663

Query: 801  PEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNKESSEKRRK 860
               +NGQNAIVAVNVHLGYNQEDS+VMN+ASLERGMFRSE IRSYKA+VD K+ SEKR+K
Sbjct: 664  EVLFNGQNAIVAVNVHLGYNQEDSIVMNKASLERGMFRSEQIRSYKAEVDTKD-SEKRKK 723

Query: 861  SDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTEKGM 920
             D+ + FGKT SKIG+VDSL+DDGFP+IGAN+ +GDIVIGRC ESGADHSIKLKHTE+G+
Sbjct: 724  MDELVQFGKTYSKIGKVDSLEDDGFPFIGANMSTGDIVIGRCTESGADHSIKLKHTERGI 783

Query: 921  VQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVP 980
            VQKVVLSSND+GKN+A V LRQVRSPCLGDKFSSMHGQKGVLG+LE Q+NFPFTIQGIVP
Sbjct: 784  VQKVVLSSNDEGKNFAAVSLRQVRSPCLGDKFSSMHGQKGVLGYLEEQQNFPFTIQGIVP 843

Query: 981  DIVINPHAFPSRQTPGQLLEAALGKGIAA------GGSLKY------ATPFSTPSVDAIT 1040
            DIVINPHAFPSRQTPGQLLEAAL KGIA       G S  Y      ATPFSTP V  IT
Sbjct: 844  DIVINPHAFPSRQTPGQLLEAALSKGIACPIQKKEGSSAAYTKLTRHATPFSTPGVTEIT 903

Query: 1041 DQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTR 1100
            +QLHRAGFSRWG+ERVYNGR+GEMMRSLIFMGPTFYQRL+HM+E+KVKFRNTGPVHPLTR
Sbjct: 904  EQLHRAGFSRWGNERVYNGRSGEMMRSLIFMGPTFYQRLVHMSENKVKFRNTGPVHPLTR 963

Query: 1101 QPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRS 1160
            QPVADRKRFGGI+FGEMERDCLIAHGASANLHERLFTLSDSSQMH+C+KCK  A+VI+R+
Sbjct: 964  QPVADRKRFGGIRFGEMERDCLIAHGASANLHERLFTLSDSSQMHICRKCKTYANVIERT 1023

Query: 1161 VAGGRKIRGPYCRVCESVDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1195
             + GRKIRGPYCRVC S D +VRV VPYGAKLLCQELFSMGI L F+T+LC
Sbjct: 1024 PSSGRKIRGPYCRVCASSDHVVRVYVPYGAKLLCQELFSMGITLNFDTKLC 1055

BLAST of MC11g0405 vs. TAIR 10
Match: AT4G21710.1 (DNA-directed RNA polymerase family protein )

HSP 1 Score: 683.3 bits (1762), Expect = 3.4e-196
Identity = 429/1232 (34.82%), Postives = 661/1232 (53.65%), Query Frame = 0

Query: 16   EAEYYSPGTDMDTDDDDYSEAVNIREIGEGFLKDFCKKASMAFFNEYGLISHQINSYNDF 75
            E   Y P      DDDD           E   ++       A+F E GL+  Q++S+++F
Sbjct: 2    EYNEYEPEPQYVEDDDD-----------EEITQEDAWAVISAYFEEKGLVRQQLDSFDEF 61

Query: 76   IESGLQKAFDYFGEIVVQP--GYDPSKKGDGEWRYASVKFGKVTLDKPKFWGGAASGKEY 135
            I++ +Q+  D   +I ++P   ++P  + D       + FG++ L KP      + G+  
Sbjct: 62   IQNTMQEIVDESADIEIRPESQHNPGHQSDFAETIYKISFGQIYLSKPMM--TESDGETA 121

Query: 136  NMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQYVDKDLLSQDNREIFIG 195
             + P+ ARL+N+TYS+ + +++     T+R++     K G D   ++   +QD  ++FIG
Sbjct: 122  TLFPKAARLRNLTYSAPLYVDV-----TKRVI-----KKGHDG--EEVTETQDFTKVFIG 181

Query: 196  RLPVMVNSDLCWMKEEQKRD------CEFDHGGYFLIKGAEKIFIAQEQICLRRLWI-SN 255
            ++P+M+ S  C + +  ++D      C +D GGYF+I G+EK+ IAQE++    +++   
Sbjct: 182  KVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKK 241

Query: 256  IQGWTVAYRSEVK-----RNR----LIIRLVENSKSEELKSKEKV-LNVYFLSTEIPVWI 315
             Q    AY  EV+     +NR    + +R++  + ++   S + +   + ++ TEIP+ I
Sbjct: 242  RQPNKYAYVGEVRSMAENQNRPPSTMFVRMLARASAKGGSSGQYIRCTLPYIRTEIPIII 301

Query: 316  LFFALGVSSDKEVVDLIDYGRDDPTVLNILFASVRE---VDNDDKWKDF--RRG------ 375
            +F ALG  +DK++++ I Y   D  ++ +L  S+ E   + N     D+  +RG      
Sbjct: 302  VFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQLVALDYIGKRGATVGVT 361

Query: 376  -KKALNYLDNEIKKTSFPPTEKIEDCLNLYLFASLKGLKQKCRFLGYMVKCILQAYTGRR 435
             +K + Y  + ++K   P     E C             +K  + GY++  +L    GRR
Sbjct: 362  KEKRIKYARDILQKEMLPHVGIGEHCET-----------KKAYYFGYIIHRLLLCALGRR 421

Query: 436  KSDNRDDFRNKRFELAGELLEREIKVHIAHARRRMEKALQRDLYGDREVRPIEHYLDASI 495
              D+RD + NKR +LAG LL    ++      R +   +Q+ +   +EV  ++  + A  
Sbjct: 422  PEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVN-LQFAIKAKT 481

Query: 496  ITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDAR 555
            IT+GL  + +TG W        R +GV   L R     T++ LRR    +   GK+   R
Sbjct: 482  ITSGLKYSLATGNWGQANAAGTR-AGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPR 541

Query: 556  YPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLK-PIVPTLFRCGMENLVDDTFT 615
              H S WG +C   TP+G+ CGL+KN+++   +++ +   PI+  L   G EN  + + +
Sbjct: 542  QLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPS 601

Query: 616  PLSGSYKIFLNGEWVGICADSVSFVTKLRRKRRRNQSLHQVEVKRDEQLKEVRIFSDAGR 675
             +  + KIF+NG WVG+  D    V  LRR RRR     +V V RD +LKE+RI++D GR
Sbjct: 602  VIPQATKIFVNGMWVGVHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGR 661

Query: 676  ILRPLLVVENLNKIDKSK----------GENNTFQSLLDKGIIELIGTEEEEDCRTAWGI 735
              RPL +V+N   + K +           E + +  L+ KG IE I TEEEE    +  I
Sbjct: 662  CSRPLFIVDNQKLLIKKRDIYALQQRESAEEDGWHHLVAKGFIEYIDTEEEETTMISMTI 721

Query: 736  KYLM------ENEGTTKYSHCELDMSFLLGLSCGLVPFANHDHARRVLYQSQKHSNQAIG 795
              L+      E   T  Y+HCE+  S +LG+   ++PF +H+ + R  YQS     QA+G
Sbjct: 722  SDLVQARLRPEEAYTENYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAM-GKQAMG 781

Query: 796  FSTTNSNFRVDTLSHQLHYPQRPLFRTMNADCLGTPGYLSSHSGISPRPEFYNGQNAIVA 855
               TN  FR+DTL++ L+YPQ+PL  T   +          H      P    G NAIVA
Sbjct: 782  IYVTNYQFRMDTLAYVLYYPQKPLVTTRAME----------HLHFRQLPA---GINAIVA 841

Query: 856  VNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNKESSEKRRKSDDAINFGKTQS 915
            ++ + GYNQEDS++MN++S++RG FRS   RSY+   + K+     ++     + G T  
Sbjct: 842  ISCYSGYNQEDSVIMNQSSIDRGFFRSLFFRSYRD--EEKKMGTLVKEDFGRPDRGSTMG 901

Query: 916  -KIGRVDSLDDDGFPYIGANLQSGDIVIGRCAE-------------SGADHSIKLKHTEK 975
             + G  D LDDDG    G  +   D++IG+                +  DHSI L+H+E 
Sbjct: 902  MRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPISQDEAQGQSSRYTRRDHSISLRHSET 961

Query: 976  GMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGI 1035
            GMV +V+L++N DG  +  V +R VR P +GDKFSS HGQKG +G   +QE+ P+TI+G+
Sbjct: 962  GMVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGV 1021

Query: 1036 VPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVDAITDQLHRAGFSR 1095
             PDI++NPHA PSR T GQL+E  +GK  A  G    ATPF+  +VD I+  LH+ G+  
Sbjct: 1022 TPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQM 1081

Query: 1096 WGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFG 1155
             G ER+YNG TG  + ++IF+GPT+YQRL HM +DK+  R  GPV  LTRQP   R R G
Sbjct: 1082 RGFERMYNGHTGRPLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDG 1141

Query: 1156 GIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGRKIRGP 1186
            G++FGEMERDC+IAHGA+  L ERLF  SD+ ++HVC+ C  +A           K    
Sbjct: 1142 GLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEVCGLIA-------IANLKKNSF 1172

BLAST of MC11g0405 vs. TAIR 10
Match: AT5G45140.1 (nuclear RNA polymerase C2 )

HSP 1 Score: 479.9 bits (1234), Expect = 5.8e-135
Identity = 364/1196 (30.43%), Postives = 586/1196 (49.00%), Query Frame = 0

Query: 58   FFNEYGLISHQINSYNDFIESGLQKAFDYFGEIVVQPGYDPSKKGDGEWRYASVKFGKVT 117
            F    GL+   ++S+N FI  G+ K       I      DPS           ++F KV 
Sbjct: 39   FLKVRGLVKQHLDSFNYFINVGIHKIVKANSRIT--STVDPS---------IYLRFKKVR 98

Query: 118  LDKPKFWGGAASGKEYNMLPRHARLQNMTYSSRMKMNINVEVYTQRLVRSDKFKTGKDQY 177
            + +P            N+ P   RL +MTY++ + +NI    Y       +K K+ KD  
Sbjct: 99   VGEPSI---INVNTVENINPHMCRLADMTYAAPIFVNIE---YVHG-SHGNKAKSAKD-- 158

Query: 178  VDKDLLSQDNREIFIGRLPVMVNSDLCWM--KEEQK----RDCEFDHGGYFLIKGAEKIF 237
                        + IGR+P+M+ S  C +  K+E++     +C  D GGYF+IKG EK+ 
Sbjct: 159  -----------NVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFIIKGTEKVL 218

Query: 238  IAQEQICLRRLWI-----SNIQGWTVAYRSEVKRNRLIIRLVENSKSEELKSKEKV-LNV 297
            + QEQ+   R+ I      NI   +V   +E+ +++ +I++           KEK+ L +
Sbjct: 219  LIQEQLSKNRIIIDSDKKGNINA-SVTSSTEMTKSKTVIQM----------EKEKIYLFL 278

Query: 298  YFLSTEIPVWILFFALGVSSDKEVVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRG 357
            +    +IP+ I+  A+G+ SD+E+V ++  GR DP     L  S+ E  ++         
Sbjct: 279  HRFVKKIPIIIVLKAMGMESDQEIVQMV--GR-DPRFSASLLPSIEECVSE----GVNTQ 338

Query: 358  KKALNYLDNEIKKTSF-PPTEK-------IEDCLNLYLFASLKGLKQKCRFLGYMVKCIL 417
            K+AL+YL+ ++KK S+  P EK       + D    ++       +QKC ++G M++ ++
Sbjct: 339  KQALDYLEAKVKKISYGTPPEKDGRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMI 398

Query: 418  QAYTGRRKSDNRDDFRNKRFELAGELL----EREIKVHIAHARRRMEKALQRDLYGDR-E 477
            +A   +   D++D   NKR EL+G+L+    E   K  ++ A + ++  L + +   R +
Sbjct: 399  EAMLNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMLSEAIKNVDHILNKPIRASRFD 458

Query: 478  VRPIEHYLDASIITNGLSRAFSTGAWAHPFKRMERISGVVATLGRANPLQTMAELRRTRQ 537
                 +      I+ GL R  STG +     RM R  G+   L R + + +M  + +   
Sbjct: 459  FSQCLNKDSRYSISLGLERTLSTGNFDIKRFRMHR-KGMTQVLTRLSFIGSMGFITKISP 518

Query: 538  QVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNMSITGLVSLNTLK-PIVPTLFR 597
            Q   + KV   R   PS WG +C   TP+GE+CGL+KN+++   V+ +  + P+V   ++
Sbjct: 519  QFEKSRKVSGPRSLQPSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYK 578

Query: 598  CGMENL----VDDTFTPLSGSYKIFLNGEWVGICADSVSFVTKLRRKRRRNQSLHQVEVK 657
             G+ +L     ++  TP   S+ + LNG  +G  +    F   LRR RR  +    V V 
Sbjct: 579  LGVTDLEVLSAEELHTP--DSFLVILNGLILGKHSRPQYFANSLRRLRRAGKIGEFVSVF 638

Query: 658  RDEQLKEVRIFSDAGRILRPLLVVE-NLNKIDKSKGEN-----NTFQSLLDKGIIELIGT 717
             +E+   V + SD GR+ RPL++ +  ++++ +   +       TF   +  G+IE +  
Sbjct: 639  TNEKQHCVYVASDVGRVCRPLVIADKGISRVKQHHMKELQDGVRTFDDFIRDGLIEYLDV 698

Query: 718  EEEEDCRTAWGIKYLMENEGTTKY-----------SHCELDMSFLLGLSCGLVPFANHDH 777
             EE +   A     L E++GTT+            +H E++   +LG+  GL+P+ +H+ 
Sbjct: 699  NEENNALIA-----LYESDGTTELDEGAEAAKADTTHIEIEPFTILGVVAGLIPYPHHNQ 758

Query: 778  ARRVLYQSQKHSNQAIGFSTTNSNFRVDTLSHQLHYPQRPLFRTMNADCLGTPGYLSSHS 837
            + R  YQ      QA+G    N   R+DTL + L YPQRPL  T   + +G         
Sbjct: 759  SPRNTYQCAM-GKQAMGNIAYNQLNRMDTLLYLLVYPQRPLLTTRTIELVG--------- 818

Query: 838  GISPRPEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKADVDNKESS 897
                  +   GQNA VAV    GY+ ED++VMN++SL+RG  R   ++   A     ++ 
Sbjct: 819  ----YDKLGAGQNATVAVMSFSGYDIEDAIVMNKSSLDRGFGRCIVMKKIVAMSQKYDNC 878

Query: 898  EKRRKSDDAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGR-----------CAE 957
                 +D  +   +T     ++  LDDDG    G  ++  DI I +            A 
Sbjct: 879  ----TADRILIPQRTGPDAEKMQILDDDGLATPGEIIRPNDIYINKQVPVDTVTKFTSAL 938

Query: 958  SGADHS-----IKLKHTEKGMVQKVVLSSNDDGKNYAVVCLRQVRSPCLGDKFSSMHGQK 1017
            S + +       K    E  +V +V L S+  G+      +R  R P LGDKFSS HGQK
Sbjct: 939  SDSQYRPAREYFKGPEGETQVVDRVALCSDKKGQLCIKYIIRHTRRPELGDKFSSRHGQK 998

Query: 1018 GVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPF 1077
            GV G +  QE+FPF+  GI PD+++NPH FPSR T G+++E    K   + G   Y + F
Sbjct: 999  GVCGIIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAF 1058

Query: 1078 STPS-----VDAITDQLHRAGFSRWGSERVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDK 1137
               S     V+ I+  L   GFS  G + +Y+G +GE + + IFMGP +YQ+L HM  DK
Sbjct: 1059 GERSGHADKVETISATLVEKGFSYSGKDLLYSGISGEPVEAYIFMGPIYYQKLKHMVLDK 1118

Query: 1138 VKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHV 1186
            +  R +GP   +TRQP   + + GG++ GEMERDCLIA+GAS  ++ERL   SD  ++ V
Sbjct: 1119 MHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQV 1152