MC11g0383 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0383
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	GPIPIRRH peptide like
Location	MC11: 3046871 .. 3047155 (+)
RNA-Seq Expression	MC11g0383
Synteny	MC11g0383

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGGCATATCATAGTCGCGATCCATCTCTATCTGCAATGGCGAACCAGCAACAGATTGATTCAAGGCCGTGGATTCTCGATGTCGTGCATTTCATCGTTGTTATTCTAATAGCTGCTCATGTTCTCGCTCTGGTACTTCAATCTCAACTCCAACCTCTACTTTTTCGTTCTACAAGACAGTCGCTACAAGTGTGAAATTCATCATTTGATCTCGTAGTTTTGTTTTAGGCCTACTGGATTTACCGATTAGCGACGGATAACAGGCCTCAAAGGAGGAAAGCACAT

mRNA sequence

AGGGCATATCATAGTCGCGATCCATCTCTATCTGCAATGGCGAACCAGCAACAGATTGATTCAAGGCCGTGGATTCTCGATGTCGTGCATTTCATCGTTGTTATTCTAATAGCTGCTCATGTTCTCGCTCTGGCCTACTGGATTTACCGATTAGCGACGGATAACAGGCCTCAAAGGAGGAAAGCACAT

Coding sequence (CDS)

AGGGCATATCATAGTCGCGATCCATCTCTATCTGCAATGGCGAACCAGCAACAGATTGATTCAAGGCCGTGGATTCTCGATGTCGTGCATTTCATCGTTGTTATTCTAATAGCTGCTCATGTTCTCGCTCTGGCCTACTGGATTTACCGATTAGCGACGGATAACAGGCCTCAAAGGAGGAAAGCACAT

Protein sequence

RAYHSRDPSLSAMANQQQIDSRPWILDVVHFIVVILIAAHVLALAYWIYRLATDNRPQRRKAH

Homology

[Close]

BLAST of MC11g0383 vs. NCBI nr
Match: KAG7037665.1 (hypothetical protein SDJN02_01295, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 102 bits (253), Expect = 3.86e-26
Identity = 53/63 (84.13%), Postives = 55/63 (87.30%), Query Frame = 0


Query: 1   RAYHSRDPSLSAMANQQQIDSRPWILDVVHFIVVILIAAHVLALAYWIYRLATDNRPQRR 60
           R  HS D SLS MANQQQ+DSRPWILD+V FIVVILIAAHVLAL YWIYRLATDNR QRR
Sbjct: 51  RECHSCDRSLSVMANQQQVDSRPWILDLVPFIVVILIAAHVLALGYWIYRLATDNRAQRR 110

Query: 61  KAH 63
           KAH
Sbjct: 111 KAH 113

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BLAST of MC11g0383 vs. NCBI nr
Match: XP_008453078.1 (PREDICTED: uncharacterized protein LOC103493902 [Cucumis melo])

HSP 1 Score: 101 bits (252), Expect = 1.16e-25
Identity = 52/63 (82.54%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 1   RAYHSRDPSLSAMANQQQIDSRPWILDVVHFIVVILIAAHVLALAYWIYRLATDNRPQRR 60
           R Y +RD S SAMANQQ +DSRPWILDVV FIVVILI AHVLAL YWIYRL TDNRPQRR
Sbjct: 82  RRYPNRDRSPSAMANQQNVDSRPWILDVVPFIVVILITAHVLALVYWIYRLVTDNRPQRR 141

Query: 61  KAH 63
           KAH
Sbjct: 142 KAH 144

[Close]

BLAST of MC11g0383 vs. NCBI nr
Match: XP_022935881.1 (uncharacterized protein LOC111442654 [Cucurbita moschata] >XP_022935882.1 uncharacterized protein LOC111442654 [Cucurbita moschata] >XP_022935883.1 uncharacterized protein LOC111442654 [Cucurbita moschata] >XP_022935884.1 uncharacterized protein LOC111442654 [Cucurbita moschata])

HSP 1 Score: 95.9 bits (237), Expect = 1.75e-24
Identity = 48/51 (94.12%), Postives = 49/51 (96.08%), Query Frame = 0


Query: 13 MANQQQIDSRPWILDVVHFIVVILIAAHVLALAYWIYRLATDNRPQRRKAH 63
          MANQQQ+DSRPWILDVV FIVVILIAAHVLAL YWIYRLATDNRPQRRKAH
Sbjct: 1  MANQQQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH 51

[Close]

BLAST of MC11g0383 vs. NCBI nr
Match: XP_023535177.1 (uncharacterized protein LOC111796681 [Cucurbita pepo subsp. pepo] >XP_023535178.1 uncharacterized protein LOC111796681 [Cucurbita pepo subsp. pepo] >XP_023535179.1 uncharacterized protein LOC111796681 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 94.4 bits (233), Expect = 7.14e-24
Identity = 47/51 (92.16%), Postives = 48/51 (94.12%), Query Frame = 0


Query: 13 MANQQQIDSRPWILDVVHFIVVILIAAHVLALAYWIYRLATDNRPQRRKAH 63
          MANQQQ+DSRPWILD V FIVVILIAAHVLAL YWIYRLATDNRPQRRKAH
Sbjct: 1  MANQQQVDSRPWILDAVPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH 51

[Close]

BLAST of MC11g0383 vs. NCBI nr
Match: XP_022977153.1 (uncharacterized protein LOC111477303 [Cucurbita maxima] >XP_022977154.1 uncharacterized protein LOC111477303 [Cucurbita maxima] >XP_022977155.1 uncharacterized protein LOC111477303 [Cucurbita maxima])

HSP 1 Score: 92.8 bits (229), Expect = 2.91e-23
Identity = 46/51 (90.20%), Postives = 48/51 (94.12%), Query Frame = 0


Query: 13 MANQQQIDSRPWILDVVHFIVVILIAAHVLALAYWIYRLATDNRPQRRKAH 63
          MANQQQ+DSRPWILDVV FIV ILIAAHVLAL YWIYRLAT+NRPQRRKAH
Sbjct: 1  MANQQQVDSRPWILDVVPFIVAILIAAHVLALVYWIYRLATENRPQRRKAH 51

[Close]

BLAST of MC11g0383 vs. ExPASy TrEMBL
Match: A0A1S3BWH4 (uncharacterized protein LOC103493902 OS=Cucumis melo OX=3656 GN=LOC103493902 PE=4 SV=1)

HSP 1 Score: 101 bits (252), Expect = 5.62e-26
Identity = 52/63 (82.54%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 1   RAYHSRDPSLSAMANQQQIDSRPWILDVVHFIVVILIAAHVLALAYWIYRLATDNRPQRR 60
           R Y +RD S SAMANQQ +DSRPWILDVV FIVVILI AHVLAL YWIYRL TDNRPQRR
Sbjct: 82  RRYPNRDRSPSAMANQQNVDSRPWILDVVPFIVVILITAHVLALVYWIYRLVTDNRPQRR 141

Query: 61  KAH 63
           KAH
Sbjct: 142 KAH 144

[Close]

BLAST of MC11g0383 vs. ExPASy TrEMBL
Match: A0A6J1F6U7 (uncharacterized protein LOC111442654 OS=Cucurbita moschata OX=3662 GN=LOC111442654 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 8.47e-25
Identity = 48/51 (94.12%), Postives = 49/51 (96.08%), Query Frame = 0


Query: 13 MANQQQIDSRPWILDVVHFIVVILIAAHVLALAYWIYRLATDNRPQRRKAH 63
          MANQQQ+DSRPWILDVV FIVVILIAAHVLAL YWIYRLATDNRPQRRKAH
Sbjct: 1  MANQQQVDSRPWILDVVPFIVVILIAAHVLALVYWIYRLATDNRPQRRKAH 51

[Close]

BLAST of MC11g0383 vs. ExPASy TrEMBL
Match: A0A6J1IQM9 (uncharacterized protein LOC111477303 OS=Cucurbita maxima OX=3661 GN=LOC111477303 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.41e-23
Identity = 46/51 (90.20%), Postives = 48/51 (94.12%), Query Frame = 0


Query: 13 MANQQQIDSRPWILDVVHFIVVILIAAHVLALAYWIYRLATDNRPQRRKAH 63
          MANQQQ+DSRPWILDVV FIV ILIAAHVLAL YWIYRLAT+NRPQRRKAH
Sbjct: 1  MANQQQVDSRPWILDVVPFIVAILIAAHVLALVYWIYRLATENRPQRRKAH 51

[Close]

BLAST of MC11g0383 vs. ExPASy TrEMBL
Match: A0A0A0L5I3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G651730 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.93e-21
Identity = 43/51 (84.31%), Postives = 45/51 (88.24%), Query Frame = 0


Query: 13 MANQQQIDSRPWILDVVHFIVVILIAAHVLALAYWIYRLATDNRPQRRKAH 63
          MAN+  +DSRPWILDVV FIVVILI AHVLAL YWIYRL TDNRPQRRKAH
Sbjct: 1  MANKHNVDSRPWILDVVPFIVVILITAHVLALVYWIYRLVTDNRPQRRKAH 51

[Close]

BLAST of MC11g0383 vs. ExPASy TrEMBL
Match: A0A2R6Q2F1 (GPIPIRRH peptide like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc22411 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.48e-16
Identity = 36/51 (70.59%), Postives = 42/51 (82.35%), Query Frame = 0


Query: 13 MANQQQIDSRPWILDVVHFIVVILIAAHVLALAYWIYRLATDNRPQRRKAH 63
          MAN QQI +RPWIL+ V  +V+ LIAAHV ALAYWIYRLAT+ +PQRRK H
Sbjct: 1  MANPQQISNRPWILEAVPLVVIFLIAAHVAALAYWIYRLATEKQPQRRKKH 51

[Close]

BLAST of MC11g0383 vs. TAIR 10
Match: AT5G10745.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 1.7e-09
Identity = 29/49 (59.18%), Postives = 37/49 (75.51%), Query Frame = 0


Query: 13 MANQQQIDSRPWILDVVHFIVVILIAAHVLALAYWIYRLATDNRPQRRK 62
          MA +Q +  RPW LD+V  +VV+L AAHV+AL YWIYRLATD R Q ++
Sbjct: 1  MAKEQHL--RPWFLDLVPALVVLLAAAHVIALGYWIYRLATDRRAQSQR 47

[Close]

BLAST of MC11g0383 vs. TAIR 10
Match: AT5G24980.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10745.1); Has 32 Blast hits to 32 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 8.6e-06
Identity = 22/36 (61.11%), Postives = 28/36 (77.78%), Query Frame = 0


Query: 26 LDVVHFIVVILIAAHVLALAYWIYRLATDNRPQRRK 62
          +D+V  +VV L A HV+AL YWIYRLA+D  PQR+K
Sbjct: 5  VDLVPAMVVFLAAVHVIALVYWIYRLASDRPPQRKK 40

The following BLAST results are available for this feature:

BLAST of MC11g0383 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g0383 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7037665.1	3.86e-26	84.13	hypothetical protein SDJN02_01295, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_008453078.1	1.16e-25	82.54	PREDICTED: uncharacterized protein LOC103493902 [Cucumis melo]	[more]
XP_022935881.1	1.75e-24	94.12	uncharacterized protein LOC111442654 [Cucurbita moschata] >XP_022935882.1 unchar...	[more]
XP_023535177.1	7.14e-24	92.16	uncharacterized protein LOC111796681 [Cucurbita pepo subsp. pepo] >XP_023535178....	[more]
XP_022977153.1	2.91e-23	90.20	uncharacterized protein LOC111477303 [Cucurbita maxima] >XP_022977154.1 uncharac...	[more]

BLAST of MC11g0383 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BWH4	5.62e-26	82.54	uncharacterized protein LOC103493902 OS=Cucumis melo OX=3656 GN=LOC103493902 PE=...	[more]
A0A6J1F6U7	8.47e-25	94.12	uncharacterized protein LOC111442654 OS=Cucurbita moschata OX=3662 GN=LOC1114426...	[more]
A0A6J1IQM9	1.41e-23	90.20	uncharacterized protein LOC111477303 OS=Cucurbita maxima OX=3661 GN=LOC111477303...	[more]
A0A0A0L5I3	1.93e-21	84.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G651730 PE=4 SV=1	[more]
A0A2R6Q2F1	1.48e-16	70.59	GPIPIRRH peptide like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_...	[more]

BLAST of MC11g0383 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10745.1	1.7e-09	59.18	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G24980.1	8.6e-06	61.11	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35755	PROTEIN, PUTATIVE-RELATED	coord: 12..63
None	No IPR available	PANTHER	PTHR35755:SF3	EXPRESSED PROTEIN	coord: 12..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g0383.1	MC11g0383.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane