MC11g0305 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0305
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	RNA-binding protein 1-like
Location	MC11: 2401337 .. 2402454 (+)
RNA-Seq Expression	MC11g0305
Synteny	MC11g0305

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAAGAGTAGTAATAGAATGGAAAGCAACAATGATCAGTCCAGAGGCAAAAAGATTTTTGTAGGGGGTTTACCATCTGATTTAACTGAGAATGAGTTCAAAAGCTACTTCGAAAAGTTTGGTCAGATAACAGATGTAGTTGTGATGCAAGATAGTGTAACAAACCGTCCTAGAGGATTTGGGTTCATCACATTTGATTCAGTGGAATCTGTAAACTATGTTCTGCAGAACAACTTCCATGAGTTGAATGGTAGGCGTGTGGAGGTGAAGAGAGCTGTCCCAAAGAATCGAAACTGCAACTCCTCCAACCCACAGAGAGGAAAAAGCCCTCTAAGCCCTCATGTTCCTTTGTATTATCCACATTTTAGTTCTGGACCTGTAGTTTATCCTGGTTATGCACCATTTCCACACTATTATGGCTCAAGCCTCTATGGGAGCTGGCACTACAATGGCTTATATGGCACTGGGCATGAGGCTCCTCCCTTGCCCTTGGGGAGTGCTTGGTATGCCCCAAATGTTTTTGGTGATGGTATGTTTCCTTCGCCCTACATAAATTCTGTAATTCATCCTGTATATTCAAGCAAAGGAGGTAGGCTCTTAGATCCAATGGCTGGAAATGGAAGAAGAAATGGAAATATGTCGGCTGATGCTGTGCCATTTCAGCTCAACAATAGAGCTTGAAGGGATCTGGAACTCTTGCATATGGAAAACATTTATTATTGGTTTTGCACCTTGGATAAGGGCATTTGGAGATTTTGTACATTCTGTTACTGCTATGGTGTCACATCCTCCTTTAGTTGTTTTTATTTTTATTTTTTTCTCAATCTATCTCTTTTCATGTCTTTAATTTTCATTCTTAACTCTATTTATTTGAACCCGTGTTTCATTTGTGGGATTTAGATATTTGTAATATAATTGTTTTAGGATTTGGATAATGACAAAAAATTGTGTCATAAATAGAGATAATGCTGTGACAAAGAGGAGTGTTTCAAAGACCTGGCAGATGAGTATTGGGCCAAACATCTCATCTGTGATCTACTAATCAATAATTTTGTAGTTAGTTTAAGAGACGTTGGCGGGCAAGGGCTTGGAAATTCTCGAGAATAGAATCGGAT

mRNA sequence

ATGAATAAGAGTAGTAATAGAATGGAAAGCAACAATGATCAGTCCAGAGGCAAAAAGATTTTTGTAGGGGGTTTACCATCTGATTTAACTGAGAATGAGTTCAAAAGCTACTTCGAAAAGTTTGGTCAGATAACAGATGTAGTTGTGATGCAAGATAGTGTAACAAACCGTCCTAGAGGATTTGGGTTCATCACATTTGATTCAGTGGAATCTGTAAACTATGTTCTGCAGAACAACTTCCATGAGTTGAATGGTAGGCGTGTGGAGGTGAAGAGAGCTGTCCCAAAGAATCGAAACTGCAACTCCTCCAACCCACAGAGAGGAAAAAGCCCTCTAAGCCCTCATGTTCCTTTGTATTATCCACATTTTAGTTCTGGACCTGTAGTTTATCCTGGTTATGCACCATTTCCACACTATTATGGCTCAAGCCTCTATGGGAGCTGGCACTACAATGGCTTATATGGCACTGGGCATGAGGCTCCTCCCTTGCCCTTGGGGAGTGCTTGGTATGCCCCAAATGTTTTTGGTGATGGTATGTTTCCTTCGCCCTACATAAATTCTGTAATTCATCCTGTATATTCAAGCAAAGGAGGTAGGCTCTTAGATCCAATGGCTGGAAATGGAAGAAGAAATGGAAATATGTCGGCTGATGCTGTGCCATTTCAGCTCAACAATAGAGCTTGAAGGGATCTGGAACTCTTGCATATGGAAAACATTTATTATTGGTTTTGCACCTTGGATAAGGGCATTTGGAGATTTTGTACATTCTGTTACTGCTATGGTGTCACATCCTCCTTTAGTTGTTTTTATTTTTATTTTTTTCTCAATCTATCTCTTTTCATGTCTTTAATTTTCATTCTTAACTCTATTTATTTGAACCCGTGTTTCATTTGTGGGATTTAGATATTTGTAATATAATTGTTTTAGGATTTGGATAATGACAAAAAATTGTGTCATAAATAGAGATAATGCTGTGACAAAGAGGAGTGTTTCAAAGACCTGGCAGATGAGTATTGGGCCAAACATCTCATCTGTGATCTACTAATCAATAATTTTGTAGTTAGTTTAAGAGACGTTGGCGGGCAAGGGCTTGGAAATTCTCGAGAATAGAATCGGAT

Coding sequence (CDS)

ATGAATAAGAGTAGTAATAGAATGGAAAGCAACAATGATCAGTCCAGAGGCAAAAAGATTTTTGTAGGGGGTTTACCATCTGATTTAACTGAGAATGAGTTCAAAAGCTACTTCGAAAAGTTTGGTCAGATAACAGATGTAGTTGTGATGCAAGATAGTGTAACAAACCGTCCTAGAGGATTTGGGTTCATCACATTTGATTCAGTGGAATCTGTAAACTATGTTCTGCAGAACAACTTCCATGAGTTGAATGGTAGGCGTGTGGAGGTGAAGAGAGCTGTCCCAAAGAATCGAAACTGCAACTCCTCCAACCCACAGAGAGGAAAAAGCCCTCTAAGCCCTCATGTTCCTTTGTATTATCCACATTTTAGTTCTGGACCTGTAGTTTATCCTGGTTATGCACCATTTCCACACTATTATGGCTCAAGCCTCTATGGGAGCTGGCACTACAATGGCTTATATGGCACTGGGCATGAGGCTCCTCCCTTGCCCTTGGGGAGTGCTTGGTATGCCCCAAATGTTTTTGGTGATGGTATGTTTCCTTCGCCCTACATAAATTCTGTAATTCATCCTGTATATTCAAGCAAAGGAGGTAGGCTCTTAGATCCAATGGCTGGAAATGGAAGAAGAAATGGAAATATGTCGGCTGATGCTGTGCCATTTCAGCTCAACAATAGAGCTTGA

Protein sequence

MNKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSPLSPHVPLYYPHFSSGPVVYPGYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMFPSPYINSVIHPVYSSKGGRLLDPMAGNGRRNGNMSADAVPFQLNNRA

Homology

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BLAST of MC11g0305 vs. ExPASy Swiss-Prot
Match: Q9C652 (RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBP1 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 6.7e-29
Identity = 87/186 (46.77%), Postives = 107/186 (57.53%), Query Frame = 0


Query: 1   MNKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRG 60
           MN     M SN   SR KKIFVGGL S+ TE EFKSYFE+FG+ TDVVVM D VTNRPRG
Sbjct: 103 MNGGLREMSSNGVTSRTKKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRG 162

Query: 61  FGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPK------NRNCNSSNPQRGKSPLSP 120
           FGF+T+DS +SV  V+Q+NFHEL+ +RVEVKRA+PK      N N  +  P       +P
Sbjct: 163 FGFVTYDSEDSVEVVMQSNFHELSDKRVEVKRAIPKEGIQSNNGNAVNIPPSYSSFQATP 222

Query: 121 HVP--------LYYP------HFSSGPVVYP-GYAPFPHYYGSSLYGSWHYNGLYGTG-H 165
           +VP        L +P      H +   V YP GY     +       SW+   +  TG +
Sbjct: 223 YVPEQNGYGMVLQFPPPVFGYHHNVQAVQYPYGY----QFTAQVANVSWNNPIMQPTGFY 282

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BLAST of MC11g0305 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.0e-24
Identity = 71/179 (39.66%), Postives = 100/179 (55.87%), Query Frame = 0


Query: 2   NKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGF 61
           N +++R    +  ++ KKIFVGGLP  LT+ EF+ YFE +G +TDV +M D  TNRPRGF
Sbjct: 94  NLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGF 153

Query: 62  GFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSPLSPHVPLYYP 121
           GF++FDS ++V+ VL   FH+L+G++VEVKRA+PK+     +NP  G   +       Y 
Sbjct: 154 GFVSFDSEDAVDSVLHKTFHDLSGKQVEVKRALPKD-----ANPGGGGRSMGGGGSGGYQ 213

Query: 122 HFSSGPVVYPGYAPFPHY------------YGSSLYGSWHYNGLYGTGHEAPPLPLGSA 169
            +      Y G      +            YGSS YG+ + NG  G G+ A     GSA
Sbjct: 214 GYGGNESSYDGRMDSNRFLQHQSVGNGLPSYGSSGYGAGYGNGSNGAGYGAYGGYTGSA 267

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BLAST of MC11g0305 vs. ExPASy Swiss-Prot
Match: Q96EP5 (DAZ-associated protein 1 OS=Homo sapiens OX=9606 GN=DAZAP1 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.8e-18
Identity = 58/156 (37.18%), Postives = 87/156 (55.77%), Query Frame = 0


Query: 12  NDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVES 71
           +D S+  KIFVGG+P +  E E + YF+KFG +T+VV++ D+   RPRGFGFITF+  +S
Sbjct: 107 SDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 166

Query: 72  VNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSPLSPHVPLYYPHFSSGPVVYP 131
           V+  +  +FH++ G++VEVKRA P++    +   Q G S     V    P+ ++G   + 
Sbjct: 167 VDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPG-QPGASQWGSRV---VPNAANG---WA 226

Query: 132 GYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGS 168
           G  P     G    G W   G    G+  PP   G+
Sbjct: 227 GQPPPTWQQGYGPQGMWVPAGQAIGGYGPPPAGRGA 255

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BLAST of MC11g0305 vs. ExPASy Swiss-Prot
Match: Q9JII5 (DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=2)

HSP 1 Score: 94.4 bits (233), Expect = 1.8e-18
Identity = 59/156 (37.82%), Postives = 87/156 (55.77%), Query Frame = 0


Query: 12  NDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVES 71
           +D S+  KIFVGG+P +  E E + YF+KFG +T+VV++ D+   RPRGFGFITF+  +S
Sbjct: 107 SDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQS 166

Query: 72  VNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSPLSPHVPLYYPHFSSGPVVYP 131
           V+  +  +FH++ G++VEVKRA P++   N +  Q G S     V    P  ++G   + 
Sbjct: 167 VDQAVNMHFHDIMGKKVEVKRAEPRDSK-NQAPGQPGASQWGSRVA---PSAANG---WA 226

Query: 132 GYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGS 168
           G  P     G    G W   G    G+  PP   G+
Sbjct: 227 GQPPPTWQQGYGPQGMWVPAGQAIGGYGPPPAGRGA 255

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BLAST of MC11g0305 vs. ExPASy Swiss-Prot
Match: Q98SJ2 (DAZ-associated protein 1 OS=Xenopus laevis OX=8355 GN=dazap1 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 2.4e-18
Identity = 64/183 (34.97%), Postives = 92/183 (50.27%), Query Frame = 0


Query: 9   ESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDS 68
           E   + SR  KIFVGG+P +  E E K YF +FG +T+VV++ D+   RPRGFGFITF+ 
Sbjct: 105 EPRTENSRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFED 164

Query: 69  VESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSPLSPHVPLYYPHFSSG-- 128
            +SV+  +  +FH++ G++VEVKRA P++    +  P  G +           +  +G  
Sbjct: 165 EQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQTPGPP-GSNQWGSRAMQSTANGWTGQP 224

Query: 129 PVVYPGYAPFPHYYGSSLYGSWHYNGL----YG--TGHEAPPLPLGSAWYAPNVFGDGMF 184
           P  + GY+P          G W   G     YG   G   PP P   A +  +    G F
Sbjct: 225 PQTWQGYSP---------QGMWMPTGQTIGGYGQPAGRGGPPPPPSFAPFLVST-TPGPF 276

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BLAST of MC11g0305 vs. NCBI nr
Match: XP_022136959.1 (RNA-binding protein 1-like [Momordica charantia] >XP_022137022.1 RNA-binding protein 1-like [Momordica charantia] >XP_022137089.1 RNA-binding protein 1-like [Momordica charantia])

HSP 1 Score: 470 bits (1209), Expect = 2.59e-167
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MNKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRG 60
           MNKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRG
Sbjct: 1   MNKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRG 60

Query: 61  FGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSPLSPHVPLYY 120
           FGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSPLSPHVPLYY
Sbjct: 61  FGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSPLSPHVPLYY 120

Query: 121 PHFSSGPVVYPGYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMF 180
           PHFSSGPVVYPGYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMF
Sbjct: 121 PHFSSGPVVYPGYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMF 180

Query: 181 PSPYINSVIHPVYSSKGGRLLDPMAGNGRRNGNMSADAVPFQLNNRA 227
           PSPYINSVIHPVYSSKGGRLLDPMAGNGRRNGNMSADAVPFQLNNRA
Sbjct: 181 PSPYINSVIHPVYSSKGGRLLDPMAGNGRRNGNMSADAVPFQLNNRA 227

[Close]

BLAST of MC11g0305 vs. NCBI nr
Match: XP_038898856.1 (RNA-binding protein 1-like [Benincasa hispida])

HSP 1 Score: 251 bits (641), Expect = 1.54e-80
Identity = 145/252 (57.54%), Postives = 173/252 (68.65%), Query Frame = 0


Query: 4   SSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGF 63
           S+ RME+NNDQ RG+KIFVGGL ++LTE+EFK+YFEKFG+ITDVVVM DSVTNRPRGFGF
Sbjct: 4   STTRMENNNDQCRGRKIFVGGLSAELTEDEFKNYFEKFGKITDVVVMHDSVTNRPRGFGF 63

Query: 64  ITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCN-----SSNPQRGKSPL---SPH 123
           ITF+SVESV+ VLQ+NFHELNGRRVEVKRA+PK  N N     ++  Q GKSPL   + +
Sbjct: 64  ITFESVESVDSVLQSNFHELNGRRVEVKRAIPKKGNYNGGHIPNARTQGGKSPLPNSNRN 123

Query: 124 VPLYYPHFSSGPVVYPGYAPFPHY-------YGSSLYGSWHYNGLYGTGHEAPPLPLGSA 183
           VP  YP++ S   VYPG+ PFPHY       YGS LYG+W +   +G       +     
Sbjct: 124 VPFPYPYYGSSYPVYPGFTPFPHYGGPGVDLYGSHLYGNW-FPPSFGN------MASEGT 183

Query: 184 WYAPNVFGDGMFPSPYINSVIHPVYSSKGGRLLDPMAGNG----RRNGN----------M 226
           WY PN FG G+FP PY NS+I P+YSSKG  L D   GNG    RRNG           M
Sbjct: 184 WYGPNFFGVGIFPPPYRNSLIPPIYSSKG--LSDTGTGNGMVDTRRNGEIKQNTTGKRIM 243

[Close]

BLAST of MC11g0305 vs. NCBI nr
Match: XP_023524364.1 (RNA-binding protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 225 bits (574), Expect = 1.24e-70
Identity = 135/240 (56.25%), Postives = 166/240 (69.17%), Query Frame = 0


Query: 7   RMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITF 66
           RME   DQ RG+KIFVGGL ++LTE++FK+YFEKFG++TDVVVM+DSVT RPRGFGFITF
Sbjct: 6   RME---DQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITF 65

Query: 67  DSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSPLSP-HVPLYYPHFSS 126
           DSV+SV+ VLQNNFHELNGRRVEVKRA+PK  N N  +    KSPLS  +V   YP++S 
Sbjct: 66  DSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH--ISKSPLSESNVLPSYPYYSC 125

Query: 127 GPVVYPGYAPFPHY------YGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGM 186
           G  VYPG+ PFP Y      YGS  YG+W ++  +G      P+   +AWYAPN FG  M
Sbjct: 126 GYTVYPGFTPFPPYGPGFGLYGSDPYGNW-FSPSFG------PMASPAAWYAPNFFG--M 185

Query: 187 FPSPYINSVIHPVYSSKGGRLLDPMAG----NGRRN--------GNMSADAVPFQLNNRA 227
           FP P+ NS+++P YSS G  L  P+AG    +GRR          NMSADAVPF   ++A
Sbjct: 186 FPPPHKNSLVYPTYSSNG--LSTPVAGYETADGRRKVEPPSRAQKNMSADAVPFHAKDKA 229

[Close]

BLAST of MC11g0305 vs. NCBI nr
Match: XP_022940975.1 (RNA-binding protein 1-like [Cucurbita moschata])

HSP 1 Score: 223 bits (567), Expect = 1.43e-69
Identity = 131/234 (55.98%), Postives = 162/234 (69.23%), Query Frame = 0


Query: 13  DQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESV 72
           DQ RG+KIFVGGL ++LTE++FK+YFEKFG++TDVVVM+DSVT RPRGFGFITFDSV+SV
Sbjct: 9   DQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSV 68

Query: 73  NYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSPLSP-HVPLYYPHFSSGPVVYP 132
           + VLQNNFHELNGRRVEVKRA+PK  N N  +    KSPLS  +V   YP++S G  VYP
Sbjct: 69  DSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH--ISKSPLSESNVLPSYPYYSCGYTVYP 128

Query: 133 GYAPFPHY------YGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMFPSPYI 192
           G+ PFP Y      YGS  YG+W ++  +G      P+   +AWYAPN FG  MFP P+ 
Sbjct: 129 GFTPFPPYGPGFGLYGSDPYGNW-FSPSFG------PMASPAAWYAPNFFG--MFPPPHK 188

Query: 193 NSVIHPVYSSKGGRLLDPMAG----NGRRN--------GNMSADAVPFQLNNRA 227
           NS+++P YSS G  L  P+AG    + RR          NMSADAVPF   ++A
Sbjct: 189 NSLVYPTYSSNG--LSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDKA 229

[Close]

BLAST of MC11g0305 vs. NCBI nr
Match: XP_022982410.1 (RNA-binding protein 1-like [Cucurbita maxima])

HSP 1 Score: 223 bits (567), Expect = 1.43e-69
Identity = 134/240 (55.83%), Postives = 164/240 (68.33%), Query Frame = 0


Query: 7   RMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITF 66
           RME   DQ RG+KIFVGGL ++LTE++FK+YFEKFG++TDVVVM+DSVT RPRGFGFITF
Sbjct: 6   RME---DQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITF 65

Query: 67  DSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSPLSP-HVPLYYPHFSS 126
           DSV+SV+ VLQNNFHELNGRRVEVKRA+PK  N N  +    KSPLS  +V   YP++S 
Sbjct: 66  DSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH--ISKSPLSESNVLPSYPYYSC 125

Query: 127 GPVVYPGYAPFPHY------YGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGM 186
           G  VYPG+ PFP Y      YGS  YG+W ++  +G      P+   +AWY PN FG  M
Sbjct: 126 GYTVYPGFTPFPPYGPGFGLYGSDPYGNW-FSPSFG------PMASPAAWYGPNFFG--M 185

Query: 187 FPSPYINSVIHPVYSSKGGRLLDPMAG----NGRRN--------GNMSADAVPFQLNNRA 227
           FP P+ NS+++P YSS G  L  P+AG    + RR          NMSADAVPF   +RA
Sbjct: 186 FPPPHKNSLVYPTYSSNG--LSTPVAGYETADARRKVEPPTRAQKNMSADAVPFHAKDRA 229

[Close]

BLAST of MC11g0305 vs. ExPASy TrEMBL
Match: A0A6J1C724 (RNA-binding protein 1-like OS=Momordica charantia OX=3673 GN=LOC111008498 PE=4 SV=1)

HSP 1 Score: 470 bits (1209), Expect = 1.25e-167
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 0


Query: 1   MNKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRG 60
           MNKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRG
Sbjct: 1   MNKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRG 60

Query: 61  FGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSPLSPHVPLYY 120
           FGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSPLSPHVPLYY
Sbjct: 61  FGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSPLSPHVPLYY 120

Query: 121 PHFSSGPVVYPGYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMF 180
           PHFSSGPVVYPGYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMF
Sbjct: 121 PHFSSGPVVYPGYAPFPHYYGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMF 180

Query: 181 PSPYINSVIHPVYSSKGGRLLDPMAGNGRRNGNMSADAVPFQLNNRA 227
           PSPYINSVIHPVYSSKGGRLLDPMAGNGRRNGNMSADAVPFQLNNRA
Sbjct: 181 PSPYINSVIHPVYSSKGGRLLDPMAGNGRRNGNMSADAVPFQLNNRA 227

[Close]

BLAST of MC11g0305 vs. ExPASy TrEMBL
Match: A0A6J1J2K5 (RNA-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481242 PE=4 SV=1)

HSP 1 Score: 223 bits (567), Expect = 6.93e-70
Identity = 134/240 (55.83%), Postives = 164/240 (68.33%), Query Frame = 0


Query: 7   RMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITF 66
           RME   DQ RG+KIFVGGL ++LTE++FK+YFEKFG++TDVVVM+DSVT RPRGFGFITF
Sbjct: 6   RME---DQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITF 65

Query: 67  DSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSPLSP-HVPLYYPHFSS 126
           DSV+SV+ VLQNNFHELNGRRVEVKRA+PK  N N  +    KSPLS  +V   YP++S 
Sbjct: 66  DSVQSVDSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH--ISKSPLSESNVLPSYPYYSC 125

Query: 127 GPVVYPGYAPFPHY------YGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGM 186
           G  VYPG+ PFP Y      YGS  YG+W ++  +G      P+   +AWY PN FG  M
Sbjct: 126 GYTVYPGFTPFPPYGPGFGLYGSDPYGNW-FSPSFG------PMASPAAWYGPNFFG--M 185

Query: 187 FPSPYINSVIHPVYSSKGGRLLDPMAG----NGRRN--------GNMSADAVPFQLNNRA 227
           FP P+ NS+++P YSS G  L  P+AG    + RR          NMSADAVPF   +RA
Sbjct: 186 FPPPHKNSLVYPTYSSNG--LSTPVAGYETADARRKVEPPTRAQKNMSADAVPFHAKDRA 229

[Close]

BLAST of MC11g0305 vs. ExPASy TrEMBL
Match: A0A6J1FS87 (RNA-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446397 PE=4 SV=1)

HSP 1 Score: 223 bits (567), Expect = 6.93e-70
Identity = 131/234 (55.98%), Postives = 162/234 (69.23%), Query Frame = 0


Query: 13  DQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFITFDSVESV 72
           DQ RG+KIFVGGL ++LTE++FK+YFEKFG++TDVVVM+DSVT RPRGFGFITFDSV+SV
Sbjct: 9   DQFRGRKIFVGGLSAELTEDDFKNYFEKFGRVTDVVVMRDSVTKRPRGFGFITFDSVQSV 68

Query: 73  NYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSPLSP-HVPLYYPHFSSGPVVYP 132
           + VLQNNFHELNGRRVEVKRA+PK  N N  +    KSPLS  +V   YP++S G  VYP
Sbjct: 69  DSVLQNNFHELNGRRVEVKRAIPKKGNYNGGH--ISKSPLSESNVLPSYPYYSCGYTVYP 128

Query: 133 GYAPFPHY------YGSSLYGSWHYNGLYGTGHEAPPLPLGSAWYAPNVFGDGMFPSPYI 192
           G+ PFP Y      YGS  YG+W ++  +G      P+   +AWYAPN FG  MFP P+ 
Sbjct: 129 GFTPFPPYGPGFGLYGSDPYGNW-FSPSFG------PMASPAAWYAPNFFG--MFPPPHK 188

Query: 193 NSVIHPVYSSKGGRLLDPMAG----NGRRN--------GNMSADAVPFQLNNRA 227
           NS+++P YSS G  L  P+AG    + RR          NMSADAVPF   ++A
Sbjct: 189 NSLVYPTYSSNG--LSTPVAGYETADARRKVDPPTRAQKNMSADAVPFHAKDKA 229

[Close]

BLAST of MC11g0305 vs. ExPASy TrEMBL
Match: A0A0A0L563 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G644730 PE=4 SV=1)

HSP 1 Score: 216 bits (550), Expect = 3.47e-67
Identity = 126/249 (50.60%), Postives = 157/249 (63.05%), Query Frame = 0


Query: 4   SSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGF 63
           S+ RM++NNDQ RG+KIFVGGL ++LTE EF+SYFE FGQITDVVVM DSVTNRPRGFGF
Sbjct: 2   STTRMDNNNDQCRGRKIFVGGLSAELTEEEFRSYFENFGQITDVVVMHDSVTNRPRGFGF 61

Query: 64  ITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNS---SNPQRGKSPL---SPHVP 123
           +TF+S+ESV+ VLQ NFHELNGRRVEVKRA+PK  N N     N +  KSPL   + +VP
Sbjct: 62  VTFESLESVDSVLQRNFHELNGRRVEVKRAIPKKGNYNGVHIPNARAAKSPLLNGNRNVP 121

Query: 124 LYYPHFSSGPVVYPGYAPFPHY------YGSSLYGSWHYNGLYGTGHEAPPLPLGSA--- 183
             YP++ SG  +YPG+  FPHY      YGS+ YG+W               P GSA   
Sbjct: 122 FPYPYYGSGYPIYPGFTHFPHYGAAVDSYGSNFYGNW--------------FPPGSANIA 181

Query: 184 ----WYAPNVFGDGMFPSPYINSVIHP---VYSSKGGRLLDPMAGNGRRNGN----MSAD 226
               W+ PN F  GM P    NS++HP   +Y      + +   G  ++N      MSAD
Sbjct: 182 SDGWWHGPNFFSVGMLPPLCRNSLMHPSKGIYIGSRNGMANTRNGEIKQNTAGKRIMSAD 236

[Close]

BLAST of MC11g0305 vs. ExPASy TrEMBL
Match: A0A6A1UXZ2 (RNA-binding protein 1 OS=Morella rubra OX=262757 GN=CJ030_MR8G001944 PE=4 SV=1)

HSP 1 Score: 179 bits (455), Expect = 3.21e-51
Identity = 107/222 (48.20%), Postives = 134/222 (60.36%), Query Frame = 0


Query: 5   SNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGFGFI 64
           S+  ++ ++Q R KKIFVGGL + LTE EFK+YFE+FG +TDVVVM DS T RPRGFGF+
Sbjct: 98  SSGSDNGDNQCRTKKIFVGGLSAGLTEAEFKNYFERFGMVTDVVVMHDSTTQRPRGFGFV 157

Query: 65  TFDSVESVNYVLQNNFHELNGRRVEVKRAVPKNRNCNSSNPQRGKSPLSPHVPLYYPHFS 124
           TFDS ESV  V+ N+FHELNGR VEVKRAVPK  N +S      +       P  YP +S
Sbjct: 158 TFDSEESVEKVILNSFHELNGRLVEVKRAVPKEANNSSDTGFTTRVEGRRGSPGCYPPYS 217

Query: 125 SGPVVYPGYAPFPHY-------YGSSLYGSWHY-NGLYGTGHEAPPLPLGSAWYAPNVFG 184
            G  + PGYAPF  +       YG S+YG W+   G    G    PLPL SAWY P   G
Sbjct: 218 FGYWILPGYAPFHGFSGGGCFPYGGSIYGGWYSPGGSVSVGSGVAPLPLRSAWYGP---G 277

Query: 185 DGMFPSPYINSVIHPVYSSKGGRLLDPMAGNGRRNGNMSADA 218
              F  P+ ++ I P YSS G  ++D  AG   R G +  ++
Sbjct: 278 ARAFSLPHGSACIPPTYSSGGVGVMDMAAGGYGRIGELETES 316

[Close]

BLAST of MC11g0305 vs. TAIR 10
Match: AT1G58470.1 (RNA-binding protein 1 )

HSP 1 Score: 129.0 bits (323), Expect = 4.7e-30
Identity = 87/186 (46.77%), Postives = 107/186 (57.53%), Query Frame = 0


Query: 1   MNKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRG 60
           MN     M SN   SR KKIFVGGL S+ TE EFKSYFE+FG+ TDVVVM D VTNRPRG
Sbjct: 103 MNGGLREMSSNGVTSRTKKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRG 162

Query: 61  FGFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPK------NRNCNSSNPQRGKSPLSP 120
           FGF+T+DS +SV  V+Q+NFHEL+ +RVEVKRA+PK      N N  +  P       +P
Sbjct: 163 FGFVTYDSEDSVEVVMQSNFHELSDKRVEVKRAIPKEGIQSNNGNAVNIPPSYSSFQATP 222

Query: 121 HVP--------LYYP------HFSSGPVVYP-GYAPFPHYYGSSLYGSWHYNGLYGTG-H 165
           +VP        L +P      H +   V YP GY     +       SW+   +  TG +
Sbjct: 223 YVPEQNGYGMVLQFPPPVFGYHHNVQAVQYPYGY----QFTAQVANVSWNNPIMQPTGFY 282

[Close]

BLAST of MC11g0305 vs. TAIR 10
Match: AT5G47620.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 123.6 bits (309), Expect = 2.0e-28
Identity = 93/235 (39.57%), Postives = 116/235 (49.36%), Query Frame = 0


Query: 2   NKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGF 61
           NKS++ ++ +   S  KKIFVGGL S +TE EFK YF +FG ITDVVVM D  T RPRGF
Sbjct: 90  NKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGF 149

Query: 62  GFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKN---------RNCNSSNPQRGKSPL 121
           GFI++DS E+V+ VLQ  FHELNG+ VEVK AVPK+          N NS    R  S L
Sbjct: 150 GFISYDSEEAVDKVLQKTFHELNGKMVEVKLAVPKDMALNTMRNQMNVNSFGTSRISSLL 209

Query: 122 SPHVPLYYPHFSSGPVVYP------------GYAPFPHYYGSSLYGSWHYNGLYGTGHEA 181
           + +   + P   SG  V P            G++PF H YG  L    +    YG+G   
Sbjct: 210 NEYTQGFSPSPISGYGVKPEVRYSPAVGNRGGFSPFGHGYGIELNFEPNQTQNYGSG--- 269

Query: 182 PPLPLGSAWYAPNVFGDGMFPSPYINSVIHPVYSSKGGRLLDPMAGNGRRNGNMS 216
                            G F  P+      P Y++  GR    M   G   GN S
Sbjct: 270 ---------------SSGGFGRPF-----SPGYAASLGRFGSQMESGGASVGNGS 301

[Close]

BLAST of MC11g0305 vs. TAIR 10
Match: AT5G47620.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 123.6 bits (309), Expect = 2.0e-28
Identity = 93/235 (39.57%), Postives = 116/235 (49.36%), Query Frame = 0


Query: 2   NKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGF 61
           NKS++ ++ +   S  KKIFVGGL S +TE EFK YF +FG ITDVVVM D  T RPRGF
Sbjct: 90  NKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGF 149

Query: 62  GFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKN---------RNCNSSNPQRGKSPL 121
           GFI++DS E+V+ VLQ  FHELNG+ VEVK AVPK+          N NS    R  S L
Sbjct: 150 GFISYDSEEAVDKVLQKTFHELNGKMVEVKLAVPKDMALNTMRNQMNVNSFGTSRISSLL 209

Query: 122 SPHVPLYYPHFSSGPVVYP------------GYAPFPHYYGSSLYGSWHYNGLYGTGHEA 181
           + +   + P   SG  V P            G++PF H YG  L    +    YG+G   
Sbjct: 210 NEYTQGFSPSPISGYGVKPEVRYSPAVGNRGGFSPFGHGYGIELNFEPNQTQNYGSG--- 269

Query: 182 PPLPLGSAWYAPNVFGDGMFPSPYINSVIHPVYSSKGGRLLDPMAGNGRRNGNMS 216
                            G F  P+      P Y++  GR    M   G   GN S
Sbjct: 270 ---------------SSGGFGRPF-----SPGYAASLGRFGSQMESGGASVGNGS 301

[Close]

BLAST of MC11g0305 vs. TAIR 10
Match: AT5G47620.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 123.6 bits (309), Expect = 2.0e-28
Identity = 93/235 (39.57%), Postives = 116/235 (49.36%), Query Frame = 0


Query: 2   NKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGF 61
           NKS++ ++ +   S  KKIFVGGL S +TE EFK YF +FG ITDVVVM D  T RPRGF
Sbjct: 30  NKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGF 89

Query: 62  GFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKN---------RNCNSSNPQRGKSPL 121
           GFI++DS E+V+ VLQ  FHELNG+ VEVK AVPK+          N NS    R  S L
Sbjct: 90  GFISYDSEEAVDKVLQKTFHELNGKMVEVKLAVPKDMALNTMRNQMNVNSFGTSRISSLL 149

Query: 122 SPHVPLYYPHFSSGPVVYP------------GYAPFPHYYGSSLYGSWHYNGLYGTGHEA 181
           + +   + P   SG  V P            G++PF H YG  L    +    YG+G   
Sbjct: 150 NEYTQGFSPSPISGYGVKPEVRYSPAVGNRGGFSPFGHGYGIELNFEPNQTQNYGSG--- 209

Query: 182 PPLPLGSAWYAPNVFGDGMFPSPYINSVIHPVYSSKGGRLLDPMAGNGRRNGNMS 216
                            G F  P+      P Y++  GR    M   G   GN S
Sbjct: 210 ---------------SSGGFGRPF-----SPGYAASLGRFGSQMESGGASVGNGS 241

[Close]

BLAST of MC11g0305 vs. TAIR 10
Match: AT5G47620.4 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 123.6 bits (309), Expect = 2.0e-28
Identity = 93/235 (39.57%), Postives = 116/235 (49.36%), Query Frame = 0


Query: 2   NKSSNRMESNNDQSRGKKIFVGGLPSDLTENEFKSYFEKFGQITDVVVMQDSVTNRPRGF 61
           NKS++ ++ +   S  KKIFVGGL S +TE EFK YF +FG ITDVVVM D  T RPRGF
Sbjct: 112 NKSNSSLQGSPGPSNSKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGF 171

Query: 62  GFITFDSVESVNYVLQNNFHELNGRRVEVKRAVPKN---------RNCNSSNPQRGKSPL 121
           GFI++DS E+V+ VLQ  FHELNG+ VEVK AVPK+          N NS    R  S L
Sbjct: 172 GFISYDSEEAVDKVLQKTFHELNGKMVEVKLAVPKDMALNTMRNQMNVNSFGTSRISSLL 231

Query: 122 SPHVPLYYPHFSSGPVVYP------------GYAPFPHYYGSSLYGSWHYNGLYGTGHEA 181
           + +   + P   SG  V P            G++PF H YG  L    +    YG+G   
Sbjct: 232 NEYTQGFSPSPISGYGVKPEVRYSPAVGNRGGFSPFGHGYGIELNFEPNQTQNYGSG--- 291

Query: 182 PPLPLGSAWYAPNVFGDGMFPSPYINSVIHPVYSSKGGRLLDPMAGNGRRNGNMS 216
                            G F  P+      P Y++  GR    M   G   GN S
Sbjct: 292 ---------------SSGGFGRPF-----SPGYAASLGRFGSQMESGGASVGNGS 323

The following BLAST results are available for this feature:

BLAST of MC11g0305 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C652	6.7e-29	46.77	RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBP1 PE=2 SV=1	[more]
Q8W034	1.0e-24	39.66	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP...	[more]
Q96EP5	1.8e-18	37.18	DAZ-associated protein 1 OS=Homo sapiens OX=9606 GN=DAZAP1 PE=1 SV=1	[more]
Q9JII5	1.8e-18	37.82	DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=2	[more]
Q98SJ2	2.4e-18	34.97	DAZ-associated protein 1 OS=Xenopus laevis OX=8355 GN=dazap1 PE=1 SV=1	[more]

BLAST of MC11g0305 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136959.1	2.59e-167	100.00	RNA-binding protein 1-like [Momordica charantia] >XP_022137022.1 RNA-binding pro...	[more]
XP_038898856.1	1.54e-80	57.54	RNA-binding protein 1-like [Benincasa hispida]	[more]
XP_023524364.1	1.24e-70	56.25	RNA-binding protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022940975.1	1.43e-69	55.98	RNA-binding protein 1-like [Cucurbita moschata]	[more]
XP_022982410.1	1.43e-69	55.83	RNA-binding protein 1-like [Cucurbita maxima]	[more]

BLAST of MC11g0305 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C724	1.25e-167	100.00	RNA-binding protein 1-like OS=Momordica charantia OX=3673 GN=LOC111008498 PE=4 S...	[more]
A0A6J1J2K5	6.93e-70	55.83	RNA-binding protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111481242 PE=4 SV=1	[more]
A0A6J1FS87	6.93e-70	55.98	RNA-binding protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111446397 PE=4 SV...	[more]
A0A0A0L563	3.47e-67	50.60	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G644730 PE=4 SV...	[more]
A0A6A1UXZ2	3.21e-51	48.20	RNA-binding protein 1 OS=Morella rubra OX=262757 GN=CJ030_MR8G001944 PE=4 SV=1	[more]

BLAST of MC11g0305 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G58470.1	4.7e-30	46.77	RNA-binding protein 1	[more]
AT5G47620.1	2.0e-28	39.57	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G47620.2	2.0e-28	39.57	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G47620.3	2.0e-28	39.57	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G47620.4	2.0e-28	39.57	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 19..91 e-value: 5.0E-25 score: 99.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 20..88 e-value: 2.6E-18 score: 65.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 18..95 score: 19.007277
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..114 e-value: 3.2E-28 score: 100.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..17
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR48032	RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6	coord: 6..195
None	No IPR available	PANTHER	PTHR48032:SF12	NUCLEOTIDE-BINDING ALPHA-BETA PLAIT DOMAIN-CONTAINING PROTEIN-RELATED	coord: 6..195
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 11..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g0305.1	MC11g0305.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding