MC11g0275 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0275
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Glycosyl hydrolase family 35 protein
Location	MC11: 2164890 .. 2165256 (+)
RNA-Seq Expression	MC11g0275
Synteny	MC11g0275

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAGACATGGCTCCGAACCACCGCCATCTCGAGTCGAATGAACGTTTATCCGCATCACCATTAAACAGGAAGCTGAAGGTTCTTGCTTTCTAATGGCTTCAAATCCCAACAACATCTTGAGATTAGATGCAACCTTCTATAACTGATATTTGTTTTTGGTTTTCAGTTGCAGGACAAGCAACATAGTAGCCCAATGAGGAGGAACACACACACGGGTGATGTAAATCTTTACGACTACCGCCCCGTTGATCCAGTTCCAAGCTCAAAGAGATCCATAAAACATGGTCCAATTGAGCATGGCTCTCCTCTGATACCCTACATTCCAAATCCTTCACCTTCCCCTCAACATCAGCCGGGCGGTTATGTG

mRNA sequence

GCAGACATGGCTCCGAACCACCGCCATCTCGAGTCGAATGAACGTTTATCCGCATCACCATTAAACAGGAAGCTGAAGTTGCAGGACAAGCAACATAGTAGCCCAATGAGGAGGAACACACACACGGGTGATGTAAATCTTTACGACTACCGCCCCGTTGATCCAGTTCCAAGCTCAAAGAGATCCATAAAACATGGTCCAATTGAGCATGGCTCTCCTCTGATACCCTACATTCCAAATCCTTCACCTTCCCCTCAACATCAGCCGGGCGGTTATGTG

Coding sequence (CDS)

GCAGACATGGCTCCGAACCACCGCCATCTCGAGTCGAATGAACGTTTATCCGCATCACCATTAAACAGGAAGCTGAAGTTGCAGGACAAGCAACATAGTAGCCCAATGAGGAGGAACACACACACGGGTGATGTAAATCTTTACGACTACCGCCCCGTTGATCCAGTTCCAAGCTCAAAGAGATCCATAAAACATGGTCCAATTGAGCATGGCTCTCCTCTGATACCCTACATTCCAAATCCTTCACCTTCCCCTCAACATCAGCCGGGCGGTTATGTG

Protein sequence

ADMAPNHRHLESNERLSASPLNRKLKLQDKQHSSPMRRNTHTGDVNLYDYRPVDPVPSSKRSIKHGPIEHGSPLIPYIPNPSPSPQHQPGGYV

Homology

[Close]

BLAST of MC11g0275 vs. NCBI nr
Match: XP_022156704.1 (uncharacterized protein LOC111023285 [Momordica charantia])

HSP 1 Score: 193 bits (491), Expect = 9.37e-62
Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   ADMAPNHRHLESNERLSASPLNRKLKLQDKQHSSPMRRNTHTGDVNLYDYRPVDPVPSSK 60
           +DMAPNHRHLESNERLSASPLNRKLKLQDKQHSSPMRRNTHTGDVNLYDYRPVDPVPSSK
Sbjct: 33  SDMAPNHRHLESNERLSASPLNRKLKLQDKQHSSPMRRNTHTGDVNLYDYRPVDPVPSSK 92

Query: 61  RSIKHGPIEHGSPLIPYIPNPSPSPQHQPGGYV 93
           RSIKHGPIEHGSPLIPYIPNPSPSPQHQPGGYV
Sbjct: 93  RSIKHGPIEHGSPLIPYIPNPSPSPQHQPGGYV 125

[Close]

BLAST of MC11g0275 vs. NCBI nr
Match: XP_011654146.1 (uncharacterized protein LOC105435308 [Cucumis sativus])

HSP 1 Score: 144 bits (363), Expect = 2.45e-42
Identity = 66/93 (70.97%), Postives = 80/93 (86.02%), Query Frame = 0


Query: 1   ADMAPNHRHLESNERLSASPLNRKLKLQDKQHSSPMRRNTHTGDVNLYDYRPVDPVPSSK 60
           ++MAPNH H+ESNE L A+P NRK+KLQD++ S+P R+N   GDVNLYDY P+DPVPSSK
Sbjct: 26  SEMAPNHLHVESNEYLFATPSNRKMKLQDREQSNPTRKNVRVGDVNLYDYHPIDPVPSSK 85

Query: 61  RSIKHGPIEHGSPLIPYIPNPSPSPQHQPGGYV 93
           RSIKHGPIEHGSPLIP++P+PSP  Q QPGG+V
Sbjct: 86  RSIKHGPIEHGSPLIPHMPSPSPPDQPQPGGFV 118

[Close]

BLAST of MC11g0275 vs. NCBI nr
Match: XP_008452634.1 (PREDICTED: uncharacterized protein LOC103493594 isoform X1 [Cucumis melo])

HSP 1 Score: 137 bits (346), Expect = 9.51e-40
Identity = 64/93 (68.82%), Postives = 77/93 (82.80%), Query Frame = 0


Query: 1   ADMAPNHRHLESNERLSASPLNRKLKLQDKQHSSPMRRNTHTGDVNLYDYRPVDPVPSSK 60
           ++MA N+ H+ESNE L A+P NRK+KLQD +  +P R+N   GDVNLYDY P+DPVPSSK
Sbjct: 26  SEMAANNLHVESNEYLFATPSNRKMKLQDSEQRNPTRKNVRVGDVNLYDYHPIDPVPSSK 85

Query: 61  RSIKHGPIEHGSPLIPYIPNPSPSPQHQPGGYV 93
           RSIKHGPIEHGSPLIP++PNPSP  Q QPGG+V
Sbjct: 86  RSIKHGPIEHGSPLIPHMPNPSPPDQPQPGGFV 118

[Close]

BLAST of MC11g0275 vs. NCBI nr
Match: XP_008452635.1 (PREDICTED: uncharacterized protein LOC103493594 isoform X2 [Cucumis melo] >KAA0064433.1 putative Glycosyl hydrolase family 35 protein [Cucumis melo var. makuwa] >TYK20155.1 putative Glycosyl hydrolase family 35 protein [Cucumis melo var. makuwa])

HSP 1 Score: 136 bits (343), Expect = 1.21e-39
Identity = 64/91 (70.33%), Postives = 75/91 (82.42%), Query Frame = 0


Query: 3  MAPNHRHLESNERLSASPLNRKLKLQDKQHSSPMRRNTHTGDVNLYDYRPVDPVPSSKRS 62
          MA N+ H+ESNE L A+P NRK+KLQD +  +P R+N   GDVNLYDY P+DPVPSSKRS
Sbjct: 1  MAANNLHVESNEYLFATPSNRKMKLQDSEQRNPTRKNVRVGDVNLYDYHPIDPVPSSKRS 60

Query: 63 IKHGPIEHGSPLIPYIPNPSPSPQHQPGGYV 93
          IKHGPIEHGSPLIP++PNPSP  Q QPGG+V
Sbjct: 61 IKHGPIEHGSPLIPHMPNPSPPDQPQPGGFV 91

[Close]

BLAST of MC11g0275 vs. NCBI nr
Match: XP_038897195.1 (uncharacterized protein LOC120085331 [Benincasa hispida])

HSP 1 Score: 135 bits (341), Expect = 6.20e-39
Identity = 63/93 (67.74%), Postives = 77/93 (82.80%), Query Frame = 0


Query: 1   ADMAPNHRHLESNERLSASPLNRKLKLQDKQHSSPMRRNTHTGDVNLYDYRPVDPVPSSK 60
           ++M PNH H+ESN+ L A+P NRK+KLQD  HS+P R N   G++NLYDY P+DPVP+SK
Sbjct: 30  SEMFPNHLHVESNKCLFATPSNRKMKLQDTVHSNPTRWNVRVGNMNLYDYSPIDPVPTSK 89

Query: 61  RSIKHGPIEHGSPLIPYIPNPSPSPQHQPGGYV 93
           RSIKHGPIEHGSPLIP++PNPSP  Q QPGG+V
Sbjct: 90  RSIKHGPIEHGSPLIPHMPNPSPPDQPQPGGFV 122

[Close]

BLAST of MC11g0275 vs. ExPASy TrEMBL
Match: A0A6J1DUC1 (uncharacterized protein LOC111023285 OS=Momordica charantia OX=3673 GN=LOC111023285 PE=4 SV=1)

HSP 1 Score: 193 bits (491), Expect = 4.54e-62
Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   ADMAPNHRHLESNERLSASPLNRKLKLQDKQHSSPMRRNTHTGDVNLYDYRPVDPVPSSK 60
           +DMAPNHRHLESNERLSASPLNRKLKLQDKQHSSPMRRNTHTGDVNLYDYRPVDPVPSSK
Sbjct: 33  SDMAPNHRHLESNERLSASPLNRKLKLQDKQHSSPMRRNTHTGDVNLYDYRPVDPVPSSK 92

Query: 61  RSIKHGPIEHGSPLIPYIPNPSPSPQHQPGGYV 93
           RSIKHGPIEHGSPLIPYIPNPSPSPQHQPGGYV
Sbjct: 93  RSIKHGPIEHGSPLIPYIPNPSPSPQHQPGGYV 125

[Close]

BLAST of MC11g0275 vs. ExPASy TrEMBL
Match: A0A0A0L0G3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642390 PE=4 SV=1)

HSP 1 Score: 144 bits (363), Expect = 1.18e-42
Identity = 66/93 (70.97%), Postives = 80/93 (86.02%), Query Frame = 0


Query: 1   ADMAPNHRHLESNERLSASPLNRKLKLQDKQHSSPMRRNTHTGDVNLYDYRPVDPVPSSK 60
           ++MAPNH H+ESNE L A+P NRK+KLQD++ S+P R+N   GDVNLYDY P+DPVPSSK
Sbjct: 26  SEMAPNHLHVESNEYLFATPSNRKMKLQDREQSNPTRKNVRVGDVNLYDYHPIDPVPSSK 85

Query: 61  RSIKHGPIEHGSPLIPYIPNPSPSPQHQPGGYV 93
           RSIKHGPIEHGSPLIP++P+PSP  Q QPGG+V
Sbjct: 86  RSIKHGPIEHGSPLIPHMPSPSPPDQPQPGGFV 118

[Close]

BLAST of MC11g0275 vs. ExPASy TrEMBL
Match: A0A1S3BUB3 (uncharacterized protein LOC103493594 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493594 PE=4 SV=1)

HSP 1 Score: 137 bits (346), Expect = 4.60e-40
Identity = 64/93 (68.82%), Postives = 77/93 (82.80%), Query Frame = 0


Query: 1   ADMAPNHRHLESNERLSASPLNRKLKLQDKQHSSPMRRNTHTGDVNLYDYRPVDPVPSSK 60
           ++MA N+ H+ESNE L A+P NRK+KLQD +  +P R+N   GDVNLYDY P+DPVPSSK
Sbjct: 26  SEMAANNLHVESNEYLFATPSNRKMKLQDSEQRNPTRKNVRVGDVNLYDYHPIDPVPSSK 85

Query: 61  RSIKHGPIEHGSPLIPYIPNPSPSPQHQPGGYV 93
           RSIKHGPIEHGSPLIP++PNPSP  Q QPGG+V
Sbjct: 86  RSIKHGPIEHGSPLIPHMPNPSPPDQPQPGGFV 118

[Close]

BLAST of MC11g0275 vs. ExPASy TrEMBL
Match: A0A5A7V8H4 (Putative Glycosyl hydrolase family 35 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002830 PE=4 SV=1)

HSP 1 Score: 136 bits (343), Expect = 5.84e-40
Identity = 64/91 (70.33%), Postives = 75/91 (82.42%), Query Frame = 0


Query: 3  MAPNHRHLESNERLSASPLNRKLKLQDKQHSSPMRRNTHTGDVNLYDYRPVDPVPSSKRS 62
          MA N+ H+ESNE L A+P NRK+KLQD +  +P R+N   GDVNLYDY P+DPVPSSKRS
Sbjct: 1  MAANNLHVESNEYLFATPSNRKMKLQDSEQRNPTRKNVRVGDVNLYDYHPIDPVPSSKRS 60

Query: 63 IKHGPIEHGSPLIPYIPNPSPSPQHQPGGYV 93
          IKHGPIEHGSPLIP++PNPSP  Q QPGG+V
Sbjct: 61 IKHGPIEHGSPLIPHMPNPSPPDQPQPGGFV 91

[Close]

BLAST of MC11g0275 vs. ExPASy TrEMBL
Match: A0A1S3BU91 (uncharacterized protein LOC103493594 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493594 PE=4 SV=1)

HSP 1 Score: 136 bits (343), Expect = 5.84e-40
Identity = 64/91 (70.33%), Postives = 75/91 (82.42%), Query Frame = 0


Query: 3  MAPNHRHLESNERLSASPLNRKLKLQDKQHSSPMRRNTHTGDVNLYDYRPVDPVPSSKRS 62
          MA N+ H+ESNE L A+P NRK+KLQD +  +P R+N   GDVNLYDY P+DPVPSSKRS
Sbjct: 1  MAANNLHVESNEYLFATPSNRKMKLQDSEQRNPTRKNVRVGDVNLYDYHPIDPVPSSKRS 60

Query: 63 IKHGPIEHGSPLIPYIPNPSPSPQHQPGGYV 93
          IKHGPIEHGSPLIP++PNPSP  Q QPGG+V
Sbjct: 61 IKHGPIEHGSPLIPHMPNPSPPDQPQPGGFV 91

[Close]

BLAST of MC11g0275 vs. TAIR 10
Match: AT5G01075.1 (Glycosyl hydrolase family 35 protein )

HSP 1 Score: 57.8 bits (138), Expect = 5.5e-09
Identity = 30/46 (65.22%), Postives = 33/46 (71.74%), Query Frame = 0


Query: 45 VNLYDYR-PVDPVPSSKRSIKHGPIEHGSPLIPYIPNPSPSPQHQP 90
          V L DY  PVDP P++K SIK GPIEHG+PL PYIP P PSP   P
Sbjct: 28 VGLEDYNFPVDPTPTTKASIKPGPIEHGTPLNPYIPKP-PSPSSSP 72

The following BLAST results are available for this feature:

BLAST of MC11g0275 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g0275 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156704.1	9.37e-62	98.92	uncharacterized protein LOC111023285 [Momordica charantia]	[more]
XP_011654146.1	2.45e-42	70.97	uncharacterized protein LOC105435308 [Cucumis sativus]	[more]
XP_008452634.1	9.51e-40	68.82	PREDICTED: uncharacterized protein LOC103493594 isoform X1 [Cucumis melo]	[more]
XP_008452635.1	1.21e-39	70.33	PREDICTED: uncharacterized protein LOC103493594 isoform X2 [Cucumis melo] >KAA00...	[more]
XP_038897195.1	6.20e-39	67.74	uncharacterized protein LOC120085331 [Benincasa hispida]	[more]

BLAST of MC11g0275 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DUC1	4.54e-62	98.92	uncharacterized protein LOC111023285 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A0A0L0G3	1.18e-42	70.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642390 PE=4 SV=1	[more]
A0A1S3BUB3	4.60e-40	68.82	uncharacterized protein LOC103493594 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7V8H4	5.84e-40	70.33	Putative Glycosyl hydrolase family 35 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3BU91	5.84e-40	70.33	uncharacterized protein LOC103493594 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of MC11g0275 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01075.1	5.5e-09	65.22	Glycosyl hydrolase family 35 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..93
None	No IPR available	PANTHER	PTHR37249:SF3	BNAANNG14020D PROTEIN	coord: 5..91
None	No IPR available	PANTHER	PTHR37249	OS03G0206201 PROTEIN	coord: 5..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g0275.1	MC11g0275.1	mRNA