MC11g0272 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0272
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Uncharacterised protein family SERF
Location	MC11: 2155330 .. 2156010 (+)
RNA-Seq Expression	MC11g0272
Synteny	MC11g0272

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGAAATGGGCGGAGGCAATGGCCAGAAGGCTAGAATGGCTCGGGAGAGGAACATGGAGAAACAAAAGTCCTCCAGAGGTAATTTGATTTAATTAATTAACCTGCCACTCAAACCTCTCTGTTTGGTTTATGACCCACCAAATTTAGCTCCTAGCTTATTTCCACATCAAGGATTGTAGCTAAAAAGATAATTACTTCAATTTTTATTGTTTTTCTTCATTTGGGGGGGAAGATGATGATTTCCCTTTATAAAGTTTTAGAGTTGATTGGAATAATTTCCACAGGAAGTCAGCTGGAAACAAACAAGAAAGCCATGACAATACAGGTAATCCTGAGTCTAAATCTTAATTATGTTCTGATTTCTTTTGTAATCTTTGTAACTTGAAAGATTCAATCATACTATGCGCTGAAACTATGTTACACCTACACGTCAACTTTTGGTTAACAAATTAAACAGATTTGTATGGACAAATTAAGGACTAACTCAGTATATTTAGTGTAGAATGAGTTAGAAATTGCAGTGTTTTGGATCTTGAAAGTGGGTTTATTGTGAATTGTTGCAGTGCAAGGTATGCATGCAGACGTTTATATGTACAACTACAGAGGTGAAGTGCAGAGAACATGCAGAAGCAAGGCACCCGAAATCTGAATTATATGCCTGTTTTCCCCATCTTAAGAAA

mRNA sequence

TGGGAAATGGGCGGAGGCAATGGCCAGAAGGCTAGAATGGCTCGGGAGAGGAACATGGAGAAACAAAAGTCCTCCAGAGGAAGTCAGCTGGAAACAAACAAGAAAGCCATGACAATACAGTGCAAGGTATGCATGCAGACGTTTATATGTACAACTACAGAGGTGAAGTGCAGAGAACATGCAGAAGCAAGGCACCCGAAATCTGAATTATATGCCTGTTTTCCCCATCTTAAGAAA

Coding sequence (CDS)

TGGGAAATGGGCGGAGGCAATGGCCAGAAGGCTAGAATGGCTCGGGAGAGGAACATGGAGAAACAAAAGTCCTCCAGAGGAAGTCAGCTGGAAACAAACAAGAAAGCCATGACAATACAGTGCAAGGTATGCATGCAGACGTTTATATGTACAACTACAGAGGTGAAGTGCAGAGAACATGCAGAAGCAAGGCACCCGAAATCTGAATTATATGCCTGTTTTCCCCATCTTAAGAAA

Protein sequence

WEMGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAEARHPKSELYACFPHLKK

Homology

[Close]

BLAST of MC11g0272 vs. ExPASy Swiss-Prot
Match: O64818 (Uncharacterized protein At2g23090 OS=Arabidopsis thaliana OX=3702 GN=At2g23090 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 2.8e-27
Identity = 59/78 (75.64%), Postives = 71/78 (91.03%), Query Frame = 0


Query: 3  MGGGNGQKARMARERNMEKQKSS-RGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHA 62
          MGGGN QK+ MAR +N+EK K++ +GSQLE NKKAM+IQCKVCMQTFICTT+EVKCREHA
Sbjct: 1  MGGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHA 60

Query: 63 EARHPKSELYACFPHLKK 80
          EA+HPK+++ ACFPHLKK
Sbjct: 61 EAKHPKADVVACFPHLKK 78

[Close]

BLAST of MC11g0272 vs. NCBI nr
Match: XP_022143957.1 (uncharacterized protein At2g23090-like isoform X2 [Momordica charantia])

HSP 1 Score: 154 bits (390), Expect = 3.02e-47
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 3  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 62
          MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE
Sbjct: 1  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60

Query: 63 ARHPKSELYACFPHLKK 79
          ARHPKSELYACFPHLKK
Sbjct: 61 ARHPKSELYACFPHLKK 77

[Close]

BLAST of MC11g0272 vs. NCBI nr
Match: XP_008452628.1 (PREDICTED: uncharacterized protein At2g23090-like [Cucumis melo] >KAA0064431.1 uncharacterized protein E6C27_scaffold255G001420 [Cucumis melo var. makuwa] >TYK20157.1 uncharacterized protein E5676_scaffold134G002860 [Cucumis melo var. makuwa])

HSP 1 Score: 150 bits (378), Expect = 2.05e-45
Identity = 73/77 (94.81%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 3  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 62
          MGGGNGQKA+MARERN+EKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE
Sbjct: 1  MGGGNGQKAKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60

Query: 63 ARHPKSELYACFPHLKK 79
          ARHPKS++YACFPHLKK
Sbjct: 61 ARHPKSDVYACFPHLKK 77

[Close]

BLAST of MC11g0272 vs. NCBI nr
Match: XP_038897649.1 (uncharacterized protein At2g23090-like [Benincasa hispida])

HSP 1 Score: 149 bits (375), Expect = 5.88e-45
Identity = 72/77 (93.51%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 3  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 62
          MGGGNGQK++MARERN+EKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE
Sbjct: 1  MGGGNGQKSKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60

Query: 63 ARHPKSELYACFPHLKK 79
          ARHPKS++YACFPHLKK
Sbjct: 61 ARHPKSDVYACFPHLKK 77

[Close]

BLAST of MC11g0272 vs. NCBI nr
Match: XP_004141283.1 (uncharacterized protein At2g23090 [Cucumis sativus] >KGN55255.1 hypothetical protein Csa_012030 [Cucumis sativus])

HSP 1 Score: 149 bits (375), Expect = 5.88e-45
Identity = 72/77 (93.51%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 3  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 62
          MGGGNGQKA+MARERN+EKQK+SRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE
Sbjct: 1  MGGGNGQKAKMARERNLEKQKASRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60

Query: 63 ARHPKSELYACFPHLKK 79
          ARHPKS++YACFPHLKK
Sbjct: 61 ARHPKSDVYACFPHLKK 77

[Close]

BLAST of MC11g0272 vs. NCBI nr
Match: XP_022143878.1 (uncharacterized protein At2g23090-like isoform X1 [Momordica charantia])

HSP 1 Score: 146 bits (369), Expect = 6.50e-44
Identity = 77/87 (88.51%), Postives = 77/87 (88.51%), Query Frame = 0


Query: 3  MGGGNGQKARMARERNMEKQKSSR----------GSQLETNKKAMTIQCKVCMQTFICTT 62
          MGGGNGQKARMARERNMEKQKSSR          GSQLETNKKAMTIQCKVCMQTFICTT
Sbjct: 1  MGGGNGQKARMARERNMEKQKSSRVLELIGIISTGSQLETNKKAMTIQCKVCMQTFICTT 60

Query: 63 TEVKCREHAEARHPKSELYACFPHLKK 79
          TEVKCREHAEARHPKSELYACFPHLKK
Sbjct: 61 TEVKCREHAEARHPKSELYACFPHLKK 87

[Close]

BLAST of MC11g0272 vs. ExPASy TrEMBL
Match: A0A6J1CSB6 (uncharacterized protein At2g23090-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013659 PE=4 SV=1)

HSP 1 Score: 154 bits (390), Expect = 1.46e-47
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 3  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 62
          MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE
Sbjct: 1  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60

Query: 63 ARHPKSELYACFPHLKK 79
          ARHPKSELYACFPHLKK
Sbjct: 61 ARHPKSELYACFPHLKK 77

[Close]

BLAST of MC11g0272 vs. ExPASy TrEMBL
Match: A0A5A7VFF4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002860 PE=4 SV=1)

HSP 1 Score: 150 bits (378), Expect = 9.93e-46
Identity = 73/77 (94.81%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 3  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 62
          MGGGNGQKA+MARERN+EKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE
Sbjct: 1  MGGGNGQKAKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60

Query: 63 ARHPKSELYACFPHLKK 79
          ARHPKS++YACFPHLKK
Sbjct: 61 ARHPKSDVYACFPHLKK 77

[Close]

BLAST of MC11g0272 vs. ExPASy TrEMBL
Match: A0A1S3BU86 (uncharacterized protein At2g23090-like OS=Cucumis melo OX=3656 GN=LOC103493591 PE=4 SV=1)

HSP 1 Score: 150 bits (378), Expect = 9.93e-46
Identity = 73/77 (94.81%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 3  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 62
          MGGGNGQKA+MARERN+EKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE
Sbjct: 1  MGGGNGQKAKMARERNLEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60

Query: 63 ARHPKSELYACFPHLKK 79
          ARHPKS++YACFPHLKK
Sbjct: 61 ARHPKSDVYACFPHLKK 77

[Close]

BLAST of MC11g0272 vs. ExPASy TrEMBL
Match: A0A0A0KZW6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642360 PE=4 SV=1)

HSP 1 Score: 149 bits (375), Expect = 2.85e-45
Identity = 72/77 (93.51%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 3  MGGGNGQKARMARERNMEKQKSSRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 62
          MGGGNGQKA+MARERN+EKQK+SRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE
Sbjct: 1  MGGGNGQKAKMARERNLEKQKASRGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHAE 60

Query: 63 ARHPKSELYACFPHLKK 79
          ARHPKS++YACFPHLKK
Sbjct: 61 ARHPKSDVYACFPHLKK 77

[Close]

BLAST of MC11g0272 vs. ExPASy TrEMBL
Match: A0A6J1CRT6 (uncharacterized protein At2g23090-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013659 PE=4 SV=1)

HSP 1 Score: 146 bits (369), Expect = 3.15e-44
Identity = 77/87 (88.51%), Postives = 77/87 (88.51%), Query Frame = 0


Query: 3  MGGGNGQKARMARERNMEKQKSSR----------GSQLETNKKAMTIQCKVCMQTFICTT 62
          MGGGNGQKARMARERNMEKQKSSR          GSQLETNKKAMTIQCKVCMQTFICTT
Sbjct: 1  MGGGNGQKARMARERNMEKQKSSRVLELIGIISTGSQLETNKKAMTIQCKVCMQTFICTT 60

Query: 63 TEVKCREHAEARHPKSELYACFPHLKK 79
          TEVKCREHAEARHPKSELYACFPHLKK
Sbjct: 61 TEVKCREHAEARHPKSELYACFPHLKK 87

[Close]

BLAST of MC11g0272 vs. TAIR 10
Match: AT2G23090.1 (Uncharacterised protein family SERF )

HSP 1 Score: 122.1 bits (305), Expect = 2.0e-28
Identity = 59/78 (75.64%), Postives = 71/78 (91.03%), Query Frame = 0


Query: 3  MGGGNGQKARMARERNMEKQKSS-RGSQLETNKKAMTIQCKVCMQTFICTTTEVKCREHA 62
          MGGGN QK+ MAR +N+EK K++ +GSQLE NKKAM+IQCKVCMQTFICTT+EVKCREHA
Sbjct: 1  MGGGNAQKSAMARAKNLEKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHA 60

Query: 63 EARHPKSELYACFPHLKK 80
          EA+HPK+++ ACFPHLKK
Sbjct: 61 EAKHPKADVVACFPHLKK 78

The following BLAST results are available for this feature:

BLAST of MC11g0272 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64818	2.8e-27	75.64	Uncharacterized protein At2g23090 OS=Arabidopsis thaliana OX=3702 GN=At2g23090 P...	[more]

BLAST of MC11g0272 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143957.1	3.02e-47	100.00	uncharacterized protein At2g23090-like isoform X2 [Momordica charantia]	[more]
XP_008452628.1	2.05e-45	94.81	PREDICTED: uncharacterized protein At2g23090-like [Cucumis melo] >KAA0064431.1 u...	[more]
XP_038897649.1	5.88e-45	93.51	uncharacterized protein At2g23090-like [Benincasa hispida]	[more]
XP_004141283.1	5.88e-45	93.51	uncharacterized protein At2g23090 [Cucumis sativus] >KGN55255.1 hypothetical pro...	[more]
XP_022143878.1	6.50e-44	88.51	uncharacterized protein At2g23090-like isoform X1 [Momordica charantia]	[more]

BLAST of MC11g0272 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CSB6	1.46e-47	100.00	uncharacterized protein At2g23090-like isoform X2 OS=Momordica charantia OX=3673...	[more]
A0A5A7VFF4	9.93e-46	94.81	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BU86	9.93e-46	94.81	uncharacterized protein At2g23090-like OS=Cucumis melo OX=3656 GN=LOC103493591 P...	[more]
A0A0A0KZW6	2.85e-45	93.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G642360 PE=4 SV=1	[more]
A0A6J1CRT6	3.15e-44	88.51	uncharacterized protein At2g23090-like isoform X1 OS=Momordica charantia OX=3673...	[more]

BLAST of MC11g0272 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23090.1	2.0e-28	75.64	Uncharacterised protein family SERF	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026939	ZNF706/At2g23090 superfamily	GENE3D	4.10.1050.10		coord: 1..79 e-value: 2.5E-34 score: 119.5
IPR039438	At2g23090-like, zinc-binding domain	PFAM	PF12907	zf-met2	coord: 40..77 e-value: 1.2E-19 score: 70.0
IPR007513	Uncharacterised protein family SERF, N-terminal	PFAM	PF04419	4F5	coord: 5..37 e-value: 3.7E-7 score: 30.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..28
None	No IPR available	PANTHER	PTHR33788:SF14	SUBFAMILY NOT NAMED	coord: 3..79
None	No IPR available	SUPERFAMILY	118359	Expressed protein At2g23090/F21P24.15	coord: 2..78
IPR039713	At2g23090-like	PANTHER	PTHR33788	OS07G0114300 PROTEIN	coord: 3..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g0272.1	MC11g0272.1	mRNA