MC11g0152 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0152
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	50S ribosomal protein L31
Location	MC11: 1101646 .. 1102351 (-)
RNA-Seq Expression	MC11g0152
Synteny	MC11g0152

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCGAGTGGCCATGCGACAAGGCCTTGAAGAACTCATCTCCCAATTCTGCTCTTCCTCCCACTTATCCTCTCTTCATCGCACCCAAACGCAGCAATGCTGAACCTAACAAATTCCTTCCTCCAACGGCGAATTCCCCCAGCCGTCGCGCCGGCGAAGAAGGTAATTTCCTTCTTCTCACTCATCTATCTACTTAGACACACGATTATTTGCTTATTTTTCCCCCGATTTTGCGTTTGATGCCGTCATTTCCAGGAATTCGGAGCGAGAAGTCACCGGCCGGTGGTCACCTGCCGGAAGAAGGATCTCCACCCCCAATTCTACGAGGACGCTAAAGTTTATTGCAACGGGGAGCTGGTGATGACGACGGGTGGGACCCAGAAAGAGTATTCGGTGGATGTGTGGTCGGGAAATCACCCATTCTATTTGGGCAGCCGCTCCGCCCTGCTCATCGACGCCGACCAGGTCGAGAAGTTCCGCAAGAAATTCGGAGAGTTGTCGCAGTTGATGGAGATACCGGTGCTCAAAGGCGAAATCATTCTGCCCACTAAGCGCAAATCCGGCGGCAAAGGGAAGAAGAAGTAGAAGAATGAATTTAGTTGCCGGATTCTTCTGTTGTGCCTGGTAATCAGTTAAATCCAAATGCATATTAAGATTCTTGGTTCTTCTCTTGTATTGCATACTTGTGTAATTTAGTGCATTCGA

mRNA sequence

ATGAGCGAGTGGCCATGCGACAAGGCCTTGAAGAACTCATCTCCCAATTCTGCTCTTCCTCCCACTTATCCTTCATCGCACCCAAACGCAGCAATGCTGAACCTAACAAATTCCTTCCTCCAACGGCGAATTCCCCCAGCCGTCGCGCCGGCGAAGAAGGAATTCGGAGCGAGAAGTCACCGGCCGGTGGTCACCTGCCGGAAGAAGGATCTCCACCCCCAATTCTACGAGGACGCTAAAGTTTATTGCAACGGGGAGCTGGTGATGACGACGGGTGGGACCCAGAAAGAGTATTCGGTGGATGTGTGGTCGGGAAATCACCCATTCTATTTGGGCAGCCGCTCCGCCCTGCTCATCGACGCCGACCAGGTCGAGAAGTTCCGCAAGAAATTCGGAGAGTTGTCGCAGTTGATGGAGATACCGGTGCTCAAAGGCGAAATCATTCTGCCCACTAAGCGCAAATCCGGCGGCAAAGGGAAGAAGAAGTAGAAGAATGAATTTAGTTGCCGGATTCTTCTGTTGTGCCTGGTAATCAGTTAAATCCAAATGCATATTAAGATTCTTGGTTCTTCTCTTGTATTGCATACTTGTGTAATTTAGTGCATTCGA

Coding sequence (CDS)

ATGAGCGAGTGGCCATGCGACAAGGCCTTGAAGAACTCATCTCCCAATTCTGCTCTTCCTCCCACTTATCCTTCATCGCACCCAAACGCAGCAATGCTGAACCTAACAAATTCCTTCCTCCAACGGCGAATTCCCCCAGCCGTCGCGCCGGCGAAGAAGGAATTCGGAGCGAGAAGTCACCGGCCGGTGGTCACCTGCCGGAAGAAGGATCTCCACCCCCAATTCTACGAGGACGCTAAAGTTTATTGCAACGGGGAGCTGGTGATGACGACGGGTGGGACCCAGAAAGAGTATTCGGTGGATGTGTGGTCGGGAAATCACCCATTCTATTTGGGCAGCCGCTCCGCCCTGCTCATCGACGCCGACCAGGTCGAGAAGTTCCGCAAGAAATTCGGAGAGTTGTCGCAGTTGATGGAGATACCGGTGCTCAAAGGCGAAATCATTCTGCCCACTAAGCGCAAATCCGGCGGCAAAGGGAAGAAGAAGTAG

Protein sequence

MSEWPCDKALKNSSPNSALPPTYPSSHPNAAMLNLTNSFLQRRIPPAVAPAKKEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK

Homology

[Close]

BLAST of MC11g0152 vs. ExPASy Swiss-Prot
Match: Q9FWS4 (50S ribosomal protein L31, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL31 PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.1e-45
Identity = 93/142 (65.49%), Postives = 109/142 (76.76%), Query Frame = 0


Query: 33  LNLTNSFLQ----------RRIPPAVAPAKKEFGARSHRPVV--TCRKKDLHPQFYEDAK 92
           ++L NSFLQ          R+   A     K+   RS   VV  TCRKK+LHP+F+EDAK
Sbjct: 3   VSLPNSFLQISPCVPSLQLRKPVMAAVKGGKQSVRRSSNTVVQITCRKKELHPEFHEDAK 62

Query: 93  VYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLIDADQVEKFRKKFGELSQLMEI 152
           VYCNGELVMTTGGT+KEY VDVWSGNHPFYLG+RSAL++DADQVEKFRK+F  LS++MEI
Sbjct: 63  VYCNGELVMTTGGTKKEYVVDVWSGNHPFYLGNRSALMVDADQVEKFRKRFAGLSEIMEI 122

Query: 153 PVLKGEIILPTKRKSGGKGKKK 163
           PVLKGEII+PTK+  G KGKKK
Sbjct: 123 PVLKGEIIMPTKKSKGPKGKKK 144

[Close]

BLAST of MC11g0152 vs. ExPASy Swiss-Prot
Match: P82249 (50S ribosomal protein L31, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL31 PE=1 SV=2)

HSP 1 Score: 177.9 bits (450), Expect = 8.9e-44
Identity = 87/131 (66.41%), Postives = 105/131 (80.15%), Query Frame = 0


Query: 32  MLNLTNSFLQRRIPPAVAPAKKEFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTT 91
           +L L+N FL +           +  + + RP  +CRK D+HP+F EDAKVYCNGELVMTT
Sbjct: 2   VLTLSNQFLAKIPATPKTLTLPKTSSSTLRPQWSCRKSDIHPEFREDAKVYCNGELVMTT 61

Query: 92  GGTQKEYSVDVWSGNHPFYLGSRSALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPT 151
           GGTQK+Y+V+VWSGNHPFYLG+RSALL+DADQVEKFRKK+GEL+Q+MEIPVLKGEIILP 
Sbjct: 62  GGTQKDYTVEVWSGNHPFYLGNRSALLLDADQVEKFRKKYGELTQIMEIPVLKGEIILPP 121

Query: 152 KRKSGGKGKKK 163
           K+KS  K KKK
Sbjct: 122 KKKS--KAKKK 130

[Close]

BLAST of MC11g0152 vs. ExPASy Swiss-Prot
Match: Q31L35 (50S ribosomal protein L31 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=rpmE PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.5e-17
Identity = 41/68 (60.29%), Postives = 52/68 (76.47%), Query Frame = 0


Query: 68  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLIDAD-QVEK 127
           K D+HPQ+Y +AKVYCNGE VMT G TQ E  VDVWSGNHPFY G++   +ID + +VE+
Sbjct: 3   KADIHPQWYPEAKVYCNGEEVMTVGSTQPELHVDVWSGNHPFYTGTQK--IIDTEGRVER 62

Query: 128 FRKKFGEL 135
           F +K+G L
Sbjct: 63  FLRKYGML 68

[Close]

BLAST of MC11g0152 vs. ExPASy Swiss-Prot
Match: Q5N0T7 (50S ribosomal protein L31 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=rpmE PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.5e-17
Identity = 41/68 (60.29%), Postives = 52/68 (76.47%), Query Frame = 0


Query: 68  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLIDAD-QVEK 127
           K D+HPQ+Y +AKVYCNGE VMT G TQ E  VDVWSGNHPFY G++   +ID + +VE+
Sbjct: 3   KADIHPQWYPEAKVYCNGEEVMTVGSTQPELHVDVWSGNHPFYTGTQK--IIDTEGRVER 62

Query: 128 FRKKFGEL 135
           F +K+G L
Sbjct: 63  FLRKYGML 68

[Close]

BLAST of MC11g0152 vs. ExPASy Swiss-Prot
Match: Q7V9Y9 (50S ribosomal protein L31 OS=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) OX=167539 GN=rpmE PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 5.5e-17
Identity = 38/65 (58.46%), Postives = 50/65 (76.92%), Query Frame = 0


Query: 68  KKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLIDADQVEKF 127
           KKD+HP +Y DAKV CNGE+VMTTG TQ E  VDVWSGNHPF+ G++  +L    +V++F
Sbjct: 3   KKDIHPNWYPDAKVICNGEVVMTTGSTQPEIHVDVWSGNHPFFTGTQK-ILDTEGRVDRF 62

Query: 128 RKKFG 133
            +K+G
Sbjct: 63  MRKYG 66

[Close]

BLAST of MC11g0152 vs. NCBI nr
Match: XP_022136375.1 (LOW QUALITY PROTEIN: 50S ribosomal protein L31, chloroplastic [Momordica charantia])

HSP 1 Score: 326 bits (836), Expect = 1.41e-112
Identity = 162/163 (99.39%), Postives = 162/163 (99.39%), Query Frame = 0


Query: 1   MSEWPCDKALKNSSPNSALPPTYPSS-HPNAAMLNLTNSFLQRRIPPAVAPAKKEFGARS 60
           MSEWPCDKALKNSSPNSALPPTYPSS HPNAAMLNLTNSFLQRRIPPAVAPAKKEFGARS
Sbjct: 1   MSEWPCDKALKNSSPNSALPPTYPSSSHPNAAMLNLTNSFLQRRIPPAVAPAKKEFGARS 60

Query: 61  HRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLI 120
           HRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLI
Sbjct: 61  HRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLI 120

Query: 121 DADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK 162
           DADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK
Sbjct: 121 DADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK 163

[Close]

BLAST of MC11g0152 vs. NCBI nr
Match: XP_023523361.1 (50S ribosomal protein L31, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 261 bits (666), Expect = 2.08e-86
Identity = 133/157 (84.71%), Postives = 140/157 (89.17%), Query Frame = 0


Query: 8   KALKNSSPNSALPPTYPSSHPNAAM-LNLTNSFLQRRIPPAVAPAK-KEFGARSHRPVVT 67
           +  +NSSP S LPPTYP     AAM LNLTNSFLQR   PA+AP K KE GAR +RPVVT
Sbjct: 24  RVKRNSSPPSVLPPTYPLFIATAAMALNLTNSFLQRPFSPAIAPPKNKELGARRYRPVVT 83

Query: 68  CRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLIDADQVE 127
           CRKKD+HPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALL+DADQVE
Sbjct: 84  CRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVE 143

Query: 128 KFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK 162
           KFRKKFGELSQLMEIPVLKGEI+LPTKRKSGGKGKKK
Sbjct: 144 KFRKKFGELSQLMEIPVLKGEIVLPTKRKSGGKGKKK 180

[Close]

BLAST of MC11g0152 vs. NCBI nr
Match: XP_022981730.1 (50S ribosomal protein L31, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 253 bits (647), Expect = 1.33e-83
Identity = 129/148 (87.16%), Postives = 134/148 (90.54%), Query Frame = 0


Query: 17  SALPPTYPSSHPNAAM-LNLTNSFLQRRIPPAVAPAK-KEFGARSHRPVVTCRKKDLHPQ 76
           S LPPTYP     AAM LNLTNSFLQR   PA+AP K KE GAR +RPVVTCRKKD+HPQ
Sbjct: 27  SVLPPTYPLFIATAAMALNLTNSFLQRSFSPAIAPPKNKELGARRYRPVVTCRKKDVHPQ 86

Query: 77  FYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLIDADQVEKFRKKFGEL 136
           FYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALL+DADQVEKFRKKFGEL
Sbjct: 87  FYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGEL 146

Query: 137 SQLMEIPVLKGEIILPTKRKSGGKGKKK 162
           SQLMEIPVLKGEI+LPTKRKSGGKGKKK
Sbjct: 147 SQLMEIPVLKGEIVLPTKRKSGGKGKKK 174

[Close]

BLAST of MC11g0152 vs. NCBI nr
Match: XP_008466538.1 (PREDICTED: 50S ribosomal protein L31, chloroplastic [Cucumis melo] >ADN34183.1 50S ribosomal protein l31 [Cucumis melo subsp. melo])

HSP 1 Score: 251 bits (640), Expect = 9.97e-83
Identity = 140/167 (83.83%), Postives = 144/167 (86.23%), Query Frame = 0


Query: 1   MSEWPCDKALKNSSPNSALPPTYPSS-HPNAAM-LNLTNSFLQ--RRIPPAVAPAK-KEF 60
           MS+W  DKALK SS      P+YP S   NAAM LNLTNSFLQ  R I PAVAP K KE 
Sbjct: 1   MSDWRRDKALKKSSS-----PSYPHSPQANAAMALNLTNSFLQLQRPISPAVAPPKHKES 60

Query: 61  GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRS 120
           GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRS
Sbjct: 61  GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRS 120

Query: 121 ALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK 162
           ALL+DADQVEKFRKKFGELSQLMEIPVLKGEIILP+KRKS  KGKKK
Sbjct: 121 ALLVDADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSA-KGKKK 161

[Close]

BLAST of MC11g0152 vs. NCBI nr
Match: XP_038896266.1 (50S ribosomal protein L31, chloroplastic [Benincasa hispida] >XP_038896267.1 50S ribosomal protein L31, chloroplastic [Benincasa hispida])

HSP 1 Score: 247 bits (631), Expect = 2.27e-81
Identity = 137/167 (82.04%), Postives = 144/167 (86.23%), Query Frame = 0


Query: 1   MSEWPCDKALKNSSPNSALPPTYPSSH-PNAAM-LNLTNSFLQRRIPP--AVAPAK-KEF 60
           MS W  DKALKNSSP+      YP S   NAAM LNLTNSFLQ + P   AVAP K KE 
Sbjct: 1   MSGWTRDKALKNSSPS------YPHSPLANAAMALNLTNSFLQLQRPSSLAVAPPKNKES 60

Query: 61  GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRS 120
           GAR+HRPVVTCRKKDLHPQFYED+KVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRS
Sbjct: 61  GARTHRPVVTCRKKDLHPQFYEDSKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRS 120

Query: 121 ALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK 162
           ALL+DADQVEKFRKKFGELSQLMEIPVLKGEI+LPTK+KSG KGKKK
Sbjct: 121 ALLVDADQVEKFRKKFGELSQLMEIPVLKGEIVLPTKKKSG-KGKKK 160

[Close]

BLAST of MC11g0152 vs. ExPASy TrEMBL
Match: A0A6J1C3Q3 (50S ribosomal protein L31, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111008063 PE=4 SV=1)

HSP 1 Score: 326 bits (836), Expect = 6.82e-113
Identity = 162/163 (99.39%), Postives = 162/163 (99.39%), Query Frame = 0


Query: 1   MSEWPCDKALKNSSPNSALPPTYPSS-HPNAAMLNLTNSFLQRRIPPAVAPAKKEFGARS 60
           MSEWPCDKALKNSSPNSALPPTYPSS HPNAAMLNLTNSFLQRRIPPAVAPAKKEFGARS
Sbjct: 1   MSEWPCDKALKNSSPNSALPPTYPSSSHPNAAMLNLTNSFLQRRIPPAVAPAKKEFGARS 60

Query: 61  HRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLI 120
           HRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLI
Sbjct: 61  HRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLI 120

Query: 121 DADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK 162
           DADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK
Sbjct: 121 DADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK 163

[Close]

BLAST of MC11g0152 vs. ExPASy TrEMBL
Match: A0A6J1J0F9 (50S ribosomal protein L31, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111480796 PE=4 SV=1)

HSP 1 Score: 253 bits (647), Expect = 6.43e-84
Identity = 129/148 (87.16%), Postives = 134/148 (90.54%), Query Frame = 0


Query: 17  SALPPTYPSSHPNAAM-LNLTNSFLQRRIPPAVAPAK-KEFGARSHRPVVTCRKKDLHPQ 76
           S LPPTYP     AAM LNLTNSFLQR   PA+AP K KE GAR +RPVVTCRKKD+HPQ
Sbjct: 27  SVLPPTYPLFIATAAMALNLTNSFLQRSFSPAIAPPKNKELGARRYRPVVTCRKKDVHPQ 86

Query: 77  FYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLIDADQVEKFRKKFGEL 136
           FYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALL+DADQVEKFRKKFGEL
Sbjct: 87  FYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGEL 146

Query: 137 SQLMEIPVLKGEIILPTKRKSGGKGKKK 162
           SQLMEIPVLKGEI+LPTKRKSGGKGKKK
Sbjct: 147 SQLMEIPVLKGEIVLPTKRKSGGKGKKK 174

[Close]

BLAST of MC11g0152 vs. ExPASy TrEMBL
Match: E5GCI4 (50S ribosomal protein L31, chloroplastic OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 251 bits (640), Expect = 4.83e-83
Identity = 140/167 (83.83%), Postives = 144/167 (86.23%), Query Frame = 0


Query: 1   MSEWPCDKALKNSSPNSALPPTYPSS-HPNAAM-LNLTNSFLQ--RRIPPAVAPAK-KEF 60
           MS+W  DKALK SS      P+YP S   NAAM LNLTNSFLQ  R I PAVAP K KE 
Sbjct: 1   MSDWRRDKALKKSSS-----PSYPHSPQANAAMALNLTNSFLQLQRPISPAVAPPKHKES 60

Query: 61  GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRS 120
           GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRS
Sbjct: 61  GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRS 120

Query: 121 ALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK 162
           ALL+DADQVEKFRKKFGELSQLMEIPVLKGEIILP+KRKS  KGKKK
Sbjct: 121 ALLVDADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSA-KGKKK 161

[Close]

BLAST of MC11g0152 vs. ExPASy TrEMBL
Match: A0A1S3CRJ2 (50S ribosomal protein L31, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503925 PE=4 SV=1)

HSP 1 Score: 251 bits (640), Expect = 4.83e-83
Identity = 140/167 (83.83%), Postives = 144/167 (86.23%), Query Frame = 0


Query: 1   MSEWPCDKALKNSSPNSALPPTYPSS-HPNAAM-LNLTNSFLQ--RRIPPAVAPAK-KEF 60
           MS+W  DKALK SS      P+YP S   NAAM LNLTNSFLQ  R I PAVAP K KE 
Sbjct: 1   MSDWRRDKALKKSSS-----PSYPHSPQANAAMALNLTNSFLQLQRPISPAVAPPKHKES 60

Query: 61  GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRS 120
           GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRS
Sbjct: 61  GARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRS 120

Query: 121 ALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPTKRKSGGKGKKK 162
           ALL+DADQVEKFRKKFGELSQLMEIPVLKGEIILP+KRKS  KGKKK
Sbjct: 121 ALLVDADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSA-KGKKK 161

[Close]

BLAST of MC11g0152 vs. ExPASy TrEMBL
Match: A0A6J1IKY2 (50S ribosomal protein L31 OS=Cucurbita maxima OX=3661 GN=LOC111475090 PE=3 SV=1)

HSP 1 Score: 245 bits (626), Expect = 2.56e-81
Identity = 123/131 (93.89%), Postives = 125/131 (95.42%), Query Frame = 0


Query: 33  LNLTNSFLQRRIPPAVAPAKK-EFGARSHRPVVTCRKKDLHPQFYEDAKVYCNGELVMTT 92
           LNLTNSFLQR I P VAP KK EFGARSHR VVTCRKKDLHPQF+EDAKVYCNGELVMTT
Sbjct: 3   LNLTNSFLQRPISPVVAPPKKKEFGARSHRAVVTCRKKDLHPQFHEDAKVYCNGELVMTT 62

Query: 93  GGTQKEYSVDVWSGNHPFYLGSRSALLIDADQVEKFRKKFGELSQLMEIPVLKGEIILPT 152
           GGTQKEYSVDVWSGNHPFYLGSRSALL+DADQVEKFRKKFGELSQLMEIPVLKGEIILPT
Sbjct: 63  GGTQKEYSVDVWSGNHPFYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIILPT 122

Query: 153 KRKSGGKGKKK 162
           KRKSGGKGKKK
Sbjct: 123 KRKSGGKGKKK 133

[Close]

BLAST of MC11g0152 vs. TAIR 10
Match: AT1G75350.1 (Ribosomal protein L31 )

HSP 1 Score: 183.3 bits (464), Expect = 1.5e-46
Identity = 93/142 (65.49%), Postives = 109/142 (76.76%), Query Frame = 0


Query: 33  LNLTNSFLQ----------RRIPPAVAPAKKEFGARSHRPVV--TCRKKDLHPQFYEDAK 92
           ++L NSFLQ          R+   A     K+   RS   VV  TCRKK+LHP+F+EDAK
Sbjct: 3   VSLPNSFLQISPCVPSLQLRKPVMAAVKGGKQSVRRSSNTVVQITCRKKELHPEFHEDAK 62

Query: 93  VYCNGELVMTTGGTQKEYSVDVWSGNHPFYLGSRSALLIDADQVEKFRKKFGELSQLMEI 152
           VYCNGELVMTTGGT+KEY VDVWSGNHPFYLG+RSAL++DADQVEKFRK+F  LS++MEI
Sbjct: 63  VYCNGELVMTTGGTKKEYVVDVWSGNHPFYLGNRSALMVDADQVEKFRKRFAGLSEIMEI 122

Query: 153 PVLKGEIILPTKRKSGGKGKKK 163
           PVLKGEII+PTK+  G KGKKK
Sbjct: 123 PVLKGEIIMPTKKSKGPKGKKK 144

The following BLAST results are available for this feature:

BLAST of MC11g0152 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FWS4	2.1e-45	65.49	50S ribosomal protein L31, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL3...	[more]
P82249	8.9e-44	66.41	50S ribosomal protein L31, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL31 P...	[more]
Q31L35	2.5e-17	60.29	50S ribosomal protein L31 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-80...	[more]
Q5N0T7	2.5e-17	60.29	50S ribosomal protein L31 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / S...	[more]
Q7V9Y9	5.5e-17	58.46	50S ribosomal protein L31 OS=Prochlorococcus marinus (strain SARG / CCMP1375 / S...	[more]

BLAST of MC11g0152 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022136375.1	1.41e-112	99.39	LOW QUALITY PROTEIN: 50S ribosomal protein L31, chloroplastic [Momordica charant...	[more]
XP_023523361.1	2.08e-86	84.71	50S ribosomal protein L31, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022981730.1	1.33e-83	87.16	50S ribosomal protein L31, chloroplastic-like [Cucurbita maxima]	[more]
XP_008466538.1	9.97e-83	83.83	PREDICTED: 50S ribosomal protein L31, chloroplastic [Cucumis melo] >ADN34183.1 5...	[more]
XP_038896266.1	2.27e-81	82.04	50S ribosomal protein L31, chloroplastic [Benincasa hispida] >XP_038896267.1 50S...	[more]

BLAST of MC11g0152 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C3Q3	6.82e-113	99.39	50S ribosomal protein L31, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1J0F9	6.43e-84	87.16	50S ribosomal protein L31, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
E5GCI4	4.83e-83	83.83	50S ribosomal protein L31, chloroplastic OS=Cucumis melo subsp. melo OX=412675 P...	[more]
A0A1S3CRJ2	4.83e-83	83.83	50S ribosomal protein L31, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503925...	[more]
A0A6J1IKY2	2.56e-81	93.89	50S ribosomal protein L31 OS=Cucurbita maxima OX=3661 GN=LOC111475090 PE=3 SV=1	[more]

BLAST of MC11g0152 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75350.1	1.5e-46	65.49	Ribosomal protein L31	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002150	Ribosomal protein L31	PRINTS	PR01249	RIBOSOMALL31	coord: 97..112 score: 49.69 coord: 68..85 score: 33.33
IPR002150	Ribosomal protein L31	PFAM	PF01197	Ribosomal_L31	coord: 68..132 e-value: 2.0E-16 score: 59.9
IPR002150	Ribosomal protein L31	TIGRFAM	TIGR00105	TIGR00105	coord: 68..133 e-value: 7.3E-15 score: 52.8
IPR002150	Ribosomal protein L31	PANTHER	PTHR33280	50S RIBOSOMAL PROTEIN L31, CHLOROPLASTIC	coord: 58..162
IPR042105	Ribosomal protein L31 superfamily	GENE3D	4.10.830.30	Ribosomal protein L31	coord: 68..135 e-value: 6.9E-17 score: 63.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..25
None	No IPR available	PANTHER	PTHR33280:SF5	50S RIBOSOMAL PROTEIN L31	coord: 58..162
IPR034704	L28p-like	SUPERFAMILY	143800	L28p-like	coord: 68..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g0152.1	MC11g0152.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome