MC11g0113 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0113
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	protein SPA, chloroplastic
Location	MC11: 792294 .. 795773 (+)
RNA-Seq Expression	MC11g0113
Synteny	MC11g0113

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTGGGCAAAATGAAGGATCAGCTAGCGAATTGAATTATTGAGTGTTAAAGTATATGCGCGGATGATATGGATAACGCGAGGCGAGCCAGAATGTTTTAATAATATCTCTCAACGCCCCCATAGAATATCGATATTAAAAAACGCATCCAAATAAAATACAACTTCCGACCCCTCTTGTTTCAAAAAATTAACATTTAGGGACCCAGGAAAAAGACAATATTTTCTTGACTTAGTAAAAAAATTGCATGTCCCATGACTTGAAACAAGAAAAAGAATCTAACCATCTTCGCCAGATCCGATGCTTGGAAGAGGGCACGTGACAAGGAGGCTGCATTGGCTTGGACCATATTTTTCTTTTTATTTTCTACGTAGGATTTGGCAGGGCCCTGGGTCTGTGGAAATTGGGCCACATGACATGACCTCAGCCTTTGCTCTCTTTTTCATTATCTGCCTTTAACCAGCGCCTTCACTGTTTCCTTTATTCTTCCCAAGCTCTATTAATGGGCCTGATCCAATAATGAGACTAAACTCTGGGCCCGATGGAATTATAAGAAGGAAAACTCTGTAAACTTGGATTGAAAGCTTTCGTTTAAGAAAAAGCCGCATTTACCTTTTGATTTGTGTGTTTGAGTAATCCATAAGAAAGTTAAAGGGAAGGTGGTGTAATTGGAAAAAGGAAAAAGAGGGAAGTGGGGACCTCCCCTTGAAGTCGAGAGAAGAGAGAGAGACACGTGAAGGTGGGGAGGGCTCCATAAGCCTTGGATTTTACGTTTTGTGAAGCTTCTCTTCTCGAACATGTGCCTCTAATTATACATGTTGGTTGCTGCTTCGTCACTTTCATCTTCTCAGTCGAGACACCCACCCACACCCACGTTTTGGGCTTATAAAACTTGGGCCGTGAGATTCCTAACTGGGCTTTTGGGCTGAATGCGCTGAGCAAGGACGGCCCAAAGCAGCATTTTTTGTGATAGAGGAGCGTTCCAACTGTCAGGCAGTTGATGAGTGGTGGGGCTGTAGCAGAGCAGAGGCAGCCAATAACGGATATCCAAATCCTGGAAAGTGGAAACCACAGCCTCGAGTGTTTGTTTAGGAATTAGGAATTAGGACCTCTCTTATTCGGAGGTCTCAGAAGCGAAGCAATCGACTGCAGGGGATCCAGAAATGACAACAGCACCTTCGCTTTCTCGCCTCCACTCTCCGTTTCTGTATTCTCCTCTCAAACCCACTTCAGCTGCCTCTCTATCACTCACATTTTCCAGAAATCAACGGTCTCCAGCATCATATCCACGCATCAGAGCTATAGATCTTGACCAAAACACGGTTCCTTCTTCATTTCTCCCCCAATTTTTCCACCACTTGATTGAAAAGGAAGTAGAAATGAGGATGGAAGTAATATTTGTTTCAGGTGGTGGCACTTTCAGTGGGGCTGGTGAGTGTTGCAGTTGGAATAGGCATTCCCGTCTTCTATGAAACCCAAATTGATAATGCTGTAAGAACTGTTCCTCTGTTCTTAATTACTTGCCCAATAATGTGGGGTTTCTTTAATTTTCAACCTCTAATCCATGTTTTTGTATCGTAGGCGAAGCGTGAGAATACCCAGCCTTGCTTTCCCTGCAGTGGTTCGGGAGCACGTAAGTTAATTTCACTGCTTCTGAGTTCTTACTCCTGCCATGAACTGATTTTAGGAGAAGGTTGCTGTCATTATAAATCATAGCCCAGGGAATTCCCCTGCGTGTTTCTCTTGTTCTTGTCCTTCTCCAATAATATATCCTTGGTCCTGCACCCAAAGATAGTTTTCATATAGTCTGCCTTTTAGATAAGATTGTATAGCTTAAAATTGTGAAGTTGAATCACAATCGATATATGGGTTTATTTATATCAAACACAAACTATAATCCATTACTCACTACACAATTCAATCACGGCTACACAAATTCAAGAGCTTCAGGCTCTTCAACTCCACCAAAACGACATAGATTTTAAACCTCCAAACGTTGAGTTAATTAGATATGCAATGTCGTTGTCAAGGAAACAACTGTGTCAAGGTCGAAATCCATATTCATATTTAGAAATAAGTGGATGGTCAGAGGGTTGTATTGTGAACTTACAAAGTCGGTCTGAAAATGAATAATTCGTCCACAGAGAAGTGCAGATTTTGTATGGGAACTGGCAATGTGACCGTAGAACTCGGTGGAGATGAAAAGGAAGTTTCCCGTTGTATTAACTGTGAAGGTGTTGGCACATTGACTTGCACTACATGTCAGGGCTCTGGAATTCAACCTCGATATCTAGATCGCAGGTATGGTTTTGCATCTTGCCGCATTTTTCTTCCTGTGATACACAGAACCCACCTGAAATTCTAGATGTAGAGACTGCCATAGAAGTTGACTTAGTGTTTGCATTTCTCTATGAACAGAGAATTTAAAGATGATGATTGAAGTTCAGCAGAACTAGAAGCAGCAACATCCACTGATTTTGCTTTCAATTTGATGCCTTGAAACTTGTTAGTTACATTGAATCGAACTTGGTATTCCACCAAGGACTTACTTTTTGGTAACTTTTTCATGCATTCTTCTAATGTATATTTGTGGTTAATAATACAAATAACACTGTAAGAGGAGAGAAGAATTGACTGTACTGCCATGTCTATGACTTCACTCTATTGACCGTCACTGCTGATAATCATTAGCTAGTAATGGCAGCAAGTGCAGGTGGATCTGATCTCAGGACACATGCAGAAGACAACTGATTACCAAATTATCTATTATTGTAAATCTTTCTATCATATCAGCCGTTTGGAGCTAGGAGAATCATTGAGAAAAAACCATATTAATCATTTGCGAACTCTGAGAATTCGGATCCAAGCCAAACAGACAGTGGGGCAGAAATATCACAGGCAAGAAGAAGACAATTCTTGTGATAAGCCTACGAAAAGATCAGAAACGTTAATTATAAAGACATTTCGCAGAAGAAAATTGAAGCTTCTGCATTCTGGGCATCCAAAAGAACAATGAATATAGAGGAATACAAAGTTTTCCGGCACCAATGCTGGTGGCAGATTCATGAAAAATCCTAATAGGTGATTCTGCGAATATTGTACACAGTTGCTCATATATGGGACAGTCCTGGACTTTGATTATCTCAGGCCGATGCTGGGCCTATGGAGAGAATCTATCCAAAAATTAAGGTAAACCGATAAGGGAAAACAAGGTAAACTTACAAAAGAAAGCAATCTACCCCATGTTCTTCCGACATATCAGACTATCGGTCCAAAGCCAATGGAAATCAGATTGCCTCGTTCATGAGAAGGCTACTACTTTTATATCATTAGATATATGTGAGAAAATAGTTTTGCAGCCACATTAGATAATATTTCAGAATTTAGTGATGTTGCTCATGTTTCTGCAGTCACATCGACCTTACAGGATTTTGCAAAATAAAAATATCAATAAAACAAGATGGAATGGCATGCGATGAC

mRNA sequence

GCTTGGGCAAAATGAAGGATCAGCTAGCGAATTGAATTATTGAGTGTTAAAGTATATGCGCGGATGATATGGATAACGCGAGGCGAGCCAGAATGTTTTAATAATATCTCTCAACGCCCCCATAGAATATCGATATTAAAAAACGCATCCAAATAAAATACAACTTCCGACCCCTCTTGTTTCAAAAAATTAACATTTAGGGACCCAGGAAAAAGACAATATTTTCTTGACTTAGTAAAAAAATTGCATGTCCCATGACTTGAAACAAGAAAAAGAATCTAACCATCTTCGCCAGATCCGATGCTTGGAAGAGGGCACGTGACAAGGAGGCTGCATTGGCTTGGACCATATTTTTCTTTTTATTTTCTACGTAGGATTTGGCAGGGCCCTGGGTCTGTGGAAATTGGGCCACATGACATGACCTCAGCCTTTGCTCTCTTTTTCATTATCTGCCTTTAACCAGCGCCTTCACTGTTTCCTTTATTCTTCCCAAGCTCTATTAATGGGCCTGATCCAATAATGAGACTAAACTCTGGGCCCGATGGAATTATAAGAAGGAAAACTCTGTAAACTTGGATTGAAAGCTTTCGTTTAAGAAAAAGCCGCATTTACCTTTTGATTTGTGTGTTTGAGTAATCCATAAGAAAGTTAAAGGGAAGGTGGTGTAATTGGAAAAAGGAAAAAGAGGGAAGTGGGGACCTCCCCTTGAAGTCGAGAGAAGAGAGAGAGACACGTGAAGGTGGGGAGGGCTCCATAAGCCTTGGATTTTACGTTTTGTGAAGCTTCTCTTCTCGAACATGTGCCTCTAATTATACATGTTGGTTGCTGCTTCGTCACTTTCATCTTCTCAGTCGAGACACCCACCCACACCCACGTTTTGGGCTTATAAAACTTGGGCCGTGAGATTCCTAACTGGGCTTTTGGGCTGAATGCGCTGAGCAAGGACGGCCCAAAGCAGCATTTTTTGTGATAGAGGAGCGTTCCAACTGTCAGGCAGTTGATGAGTGGTGGGGCTGTAGCAGAGCAGAGGCAGCCAATAACGGATATCCAAATCCTGGAAAGTGGAAACCACAGCCTCGAGTGTTTGTTTAGGAATTAGGAATTAGGACCTCTCTTATTCGGAGGTCTCAGAAGCGAAGCAATCGACTGCAGGGGATCCAGAAATGACAACAGCACCTTCGCTTTCTCGCCTCCACTCTCCGTTTCTGTATTCTCCTCTCAAACCCACTTCAGCTGCCTCTCTATCACTCACATTTTCCAGAAATCAACGGTCTCCAGCATCATATCCACGCATCAGAGCTATAGATCTTGACCAAAACACGGTGGTGGCACTTTCAGTGGGGCTGGTGAGTGTTGCAGTTGGAATAGGCATTCCCGTCTTCTATGAAACCCAAATTGATAATGCTGCGAAGCGTGAGAATACCCAGCCTTGCTTTCCCTGCAGTGGTTCGGGAGCACAGAAGTGCAGATTTTGTATGGGAACTGGCAATGTGACCGTAGAACTCGGTGGAGATGAAAAGGAAGTTTCCCGTTGTATTAACTGTGAAGGTGTTGGCACATTGACTTGCACTACATGTCAGGGCTCTGGAATTCAACCTCGATATCTAGATCGCAGAGAATTTAAAGATGATGATTGAAGTTCAGCAGAACTAGAAGCAGCAACATCCACTGATTTTGCTTTCAATTTGATGCCTTGAAACTTGTTAGTTACATTGAATCGAACTTGGTATTCCACCAAGGACTTACTTTTTGGTAACTTTTTCATGCATTCTTCTAATGTATATTTGTGGTTAATAATACAAATAACACTGTAAGAGGAGAGAAGAATTGACTGTACTGCCATGTCTATGACTTCACTCTATTGACCGTCACTGCTGATAATCATTAGCTAGTAATGGCAGCAAGTGCAGGTGGATCTGATCTCAGGACACATGCAGAAGACAACTGATTACCAAATTATCTATTATTGTAAATCTTTCTATCATATCAGCCGTTTGGAGCTAGGAGAATCATTGAGAAAAAACCATATTAATCATTTGCGAACTCTGAGAATTCGGATCCAAGCCAAACAGACAGTGGGGCAGAAATATCACAGGCAAGAAGAAGACAATTCTTGTGATAAGCCTACGAAAAGATCAGAAACGTTAATTATAAAGACATTTCGCAGAAGAAAATTGAAGCTTCTGCATTCTGGGCATCCAAAAGAACAATGAATATAGAGGAATACAAAGTTTTCCGGCACCAATGCTGGTGGCAGATTCATGAAAAATCCTAATAGGTGATTCTGCGAATATTGTACACAGTTGCTCATATATGGGACAGTCCTGGACTTTGATTATCTCAGGCCGATGCTGGGCCTATGGAGAGAATCTATCCAAAAATTAAGGTAAACCGATAAGGGAAAACAAGGTAAACTTACAAAAGAAAGCAATCTACCCCATGTTCTTCCGACATATCAGACTATCGGTCCAAAGCCAATGGAAATCAGATTGCCTCGTTCATGAGAAGGCTACTACTTTTATATCATTAGATATATGTGAGAAAATAGTTTTGCAGCCACATTAGATAATATTTCAGAATTTAGTGATGTTGCTCATGTTTCTGCAGTCACATCGACCTTACAGGATTTTGCAAAATAAAAATATCAATAAAACAAGATGGAATGGCATGCGATGAC

Coding sequence (CDS)

ATGACAACAGCACCTTCGCTTTCTCGCCTCCACTCTCCGTTTCTGTATTCTCCTCTCAAACCCACTTCAGCTGCCTCTCTATCACTCACATTTTCCAGAAATCAACGGTCTCCAGCATCATATCCACGCATCAGAGCTATAGATCTTGACCAAAACACGGTGGTGGCACTTTCAGTGGGGCTGGTGAGTGTTGCAGTTGGAATAGGCATTCCCGTCTTCTATGAAACCCAAATTGATAATGCTGCGAAGCGTGAGAATACCCAGCCTTGCTTTCCCTGCAGTGGTTCGGGAGCACAGAAGTGCAGATTTTGTATGGGAACTGGCAATGTGACCGTAGAACTCGGTGGAGATGAAAAGGAAGTTTCCCGTTGTATTAACTGTGAAGGTGTTGGCACATTGACTTGCACTACATGTCAGGGCTCTGGAATTCAACCTCGATATCTAGATCGCAGAGAATTTAAAGATGATGATTGA

Protein sequence

MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKCRFCMGTGNVTVELGGDEKEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRREFKDDD

Homology

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BLAST of MC11g0113 vs. ExPASy Swiss-Prot
Match: K4BVL1 (Protein SPA, chloroplastic OS=Solanum lycopersicum OX=4081 GN=SPA PE=2 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 3.4e-64
Identity = 120/159 (75.47%), Postives = 138/159 (86.79%), Query Frame = 0


Query: 1   MTTAPSLSRLHSPFLYSPLK-PT-SAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALS 60
           M TAPSLSR  SPF+ SPLK PT S++  +  F +  R   SYP I+A+DLDQNTV+A++
Sbjct: 1   MLTAPSLSRFKSPFISSPLKLPTLSSSFFTQKFHQTCRRRNSYPCIKAVDLDQNTVIAIT 60

Query: 61  VGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKCRFCMGTGNVTVELGGDE 120
           VG++SVA+G+GIPVFYETQIDNAAKRENTQPCFPC+G+GAQKCRFCMGTG+VTVELGG E
Sbjct: 61  VGVLSVAIGVGIPVFYETQIDNAAKRENTQPCFPCTGTGAQKCRFCMGTGSVTVELGGGE 120

Query: 121 KEVSRCINCEGVGTLTCTTCQGSGIQPRYLDRREFKDDD 158
            EVSRCINC+G G LTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 TEVSRCINCDGAGGLTCTTCQGSGIQPRYLDRREFKDDD 159

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BLAST of MC11g0113 vs. ExPASy Swiss-Prot
Match: Q8GSJ6 (Protein disulfide-isomerase LQY1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LQY1 PE=1 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 7.8e-61
Identity = 116/156 (74.36%), Postives = 134/156 (85.90%), Query Frame = 0


Query: 3   TAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPA-SYPRIRAIDLDQNTVVALSVGL 62
           +APS  RLHSPF++ P+  T     S   +RN RSP+ SYPRI+A +LD NTVVA+SVG+
Sbjct: 4   SAPSPPRLHSPFIHCPINFTP----SSFSARNLRSPSTSYPRIKA-ELDPNTVVAISVGV 63

Query: 63  VSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKCRFCMGTGNVTVELGGDEKEV 122
            SVA+GIGIPVFYETQIDNAAKRENTQPCFPC+G+GAQKCR C+G+GNVTVELGG EKEV
Sbjct: 64  ASVALGIGIPVFYETQIDNAAKRENTQPCFPCNGTGAQKCRLCVGSGNVTVELGGGEKEV 123

Query: 123 SRCINCEGVGTLTCTTCQGSGIQPRYLDRREFKDDD 158
           S CINC+G G+LTCTTCQGSG+QPRYLDRREFKDDD
Sbjct: 124 SNCINCDGAGSLTCTTCQGSGVQPRYLDRREFKDDD 154

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BLAST of MC11g0113 vs. NCBI nr
Match: XP_022142253.1 (protein SPA, chloroplastic [Momordica charantia])

HSP 1 Score: 316 bits (810), Expect = 8.60e-109
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60
           MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60

Query: 61  LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKCRFCMGTGNVTVELGGDEKE 120
           LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKCRFCMGTGNVTVELGGDEKE
Sbjct: 61  LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKCRFCMGTGNVTVELGGDEKE 120

Query: 121 VSRCINCEGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157
           VSRCINCEGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCEGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

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BLAST of MC11g0113 vs. NCBI nr
Match: XP_022936404.1 (protein SPA, chloroplastic [Cucurbita moschata] >XP_022975871.1 protein SPA, chloroplastic [Cucurbita maxima] >XP_023535894.1 protein SPA, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6591276.1 Protein SPA, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 305 bits (781), Expect = 2.28e-104
Identity = 149/157 (94.90%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 1   MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60
           MT APSLSRLHSPFLY PLKPTS+ASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60

Query: 61  LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKCRFCMGTGNVTVELGGDEKE 120
           L S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGAQ+CRFCMGTGNVTVELGGDEKE
Sbjct: 61  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRCRFCMGTGNVTVELGGDEKE 120

Query: 121 VSRCINCEGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157
           VSRCINC+GVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

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BLAST of MC11g0113 vs. NCBI nr
Match: XP_038899789.1 (protein SPA, chloroplastic [Benincasa hispida])

HSP 1 Score: 302 bits (774), Expect = 2.66e-103
Identity = 147/157 (93.63%), Postives = 153/157 (97.45%), Query Frame = 0


Query: 1   MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60
           MT APS+SRLHSPFLY PLKPTS+ SLS+TFSRNQRSPA+YPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTVAPSVSRLHSPFLYCPLKPTSSTSLSVTFSRNQRSPATYPRIRAIDLDQNTVVALSVG 60

Query: 61  LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKCRFCMGTGNVTVELGGDEKE 120
           LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQ+CRFCMGTGNVTVELGGDEKE
Sbjct: 61  LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGNVTVELGGDEKE 120

Query: 121 VSRCINCEGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157
           VSRCINC+G GTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCDGAGTLTCTTCQGSGIQPRYLDRREFKDDD 157

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BLAST of MC11g0113 vs. NCBI nr
Match: XP_008466492.1 (PREDICTED: protein SPA, chloroplastic [Cucumis melo])

HSP 1 Score: 301 bits (772), Expect = 5.37e-103
Identity = 148/157 (94.27%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60
           MT APSLSRLHSPFLY PLKPTS+ SLS+TFS NQRSP SYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVG 60

Query: 61  LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKCRFCMGTGNVTVELGGDEKE 120
           LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQ+CRFCMGTGNVTVELGGDEKE
Sbjct: 61  LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGNVTVELGGDEKE 120

Query: 121 VSRCINCEGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157
           VSRCINC+GVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

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BLAST of MC11g0113 vs. NCBI nr
Match: XP_004136388.1 (protein disulfide-isomerase LQY1, chloroplastic [Cucumis sativus] >KGN60026.1 hypothetical protein Csa_002467 [Cucumis sativus])

HSP 1 Score: 298 bits (763), Expect = 1.27e-101
Identity = 145/157 (92.36%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60
           MT APSLSRLHSPFLY PLKPT + SLS+TFS NQRSP SYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTVAPSLSRLHSPFLYCPLKPTPSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVG 60

Query: 61  LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKCRFCMGTGNVTVELGGDEKE 120
           LVSVA+GIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQ+CRFCMGTGNVTVELGGD+KE
Sbjct: 61  LVSVAIGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGNVTVELGGDDKE 120

Query: 121 VSRCINCEGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157
           VSRCINC+GVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

[Close]

BLAST of MC11g0113 vs. ExPASy TrEMBL
Match: A0A6J1CMU6 (protein SPA, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012411 PE=4 SV=1)

HSP 1 Score: 316 bits (810), Expect = 4.16e-109
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 1   MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60
           MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60

Query: 61  LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKCRFCMGTGNVTVELGGDEKE 120
           LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKCRFCMGTGNVTVELGGDEKE
Sbjct: 61  LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKCRFCMGTGNVTVELGGDEKE 120

Query: 121 VSRCINCEGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157
           VSRCINCEGVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCEGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

[Close]

BLAST of MC11g0113 vs. ExPASy TrEMBL
Match: A0A6J1IFD3 (protein SPA, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111476444 PE=4 SV=1)

HSP 1 Score: 305 bits (781), Expect = 1.10e-104
Identity = 149/157 (94.90%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 1   MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60
           MT APSLSRLHSPFLY PLKPTS+ASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60

Query: 61  LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKCRFCMGTGNVTVELGGDEKE 120
           L S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGAQ+CRFCMGTGNVTVELGGDEKE
Sbjct: 61  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRCRFCMGTGNVTVELGGDEKE 120

Query: 121 VSRCINCEGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157
           VSRCINC+GVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

[Close]

BLAST of MC11g0113 vs. ExPASy TrEMBL
Match: A0A6J1F877 (protein SPA, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111443033 PE=4 SV=1)

HSP 1 Score: 305 bits (781), Expect = 1.10e-104
Identity = 149/157 (94.90%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 1   MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60
           MT APSLSRLHSPFLY PLKPTS+ASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTVAPSLSRLHSPFLYCPLKPTSSASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60

Query: 61  LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKCRFCMGTGNVTVELGGDEKE 120
           L S+AVGIGIPVFYETQIDNAAKRENTQPCFPC+GSGAQ+CRFCMGTGNVTVELGGDEKE
Sbjct: 61  LASLAVGIGIPVFYETQIDNAAKRENTQPCFPCTGSGAQRCRFCMGTGNVTVELGGDEKE 120

Query: 121 VSRCINCEGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157
           VSRCINC+GVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

[Close]

BLAST of MC11g0113 vs. ExPASy TrEMBL
Match: A0A1S3CRE4 (protein SPA, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503884 PE=4 SV=1)

HSP 1 Score: 301 bits (772), Expect = 2.60e-103
Identity = 148/157 (94.27%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60
           MT APSLSRLHSPFLY PLKPTS+ SLS+TFS NQRSP SYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTVAPSLSRLHSPFLYCPLKPTSSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVG 60

Query: 61  LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKCRFCMGTGNVTVELGGDEKE 120
           LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQ+CRFCMGTGNVTVELGGDEKE
Sbjct: 61  LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGNVTVELGGDEKE 120

Query: 121 VSRCINCEGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157
           VSRCINC+GVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

[Close]

BLAST of MC11g0113 vs. ExPASy TrEMBL
Match: A0A0A0LJ55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872080 PE=4 SV=1)

HSP 1 Score: 298 bits (763), Expect = 6.13e-102
Identity = 145/157 (92.36%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MTTAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPASYPRIRAIDLDQNTVVALSVG 60
           MT APSLSRLHSPFLY PLKPT + SLS+TFS NQRSP SYPRIRAIDLDQNTVVALSVG
Sbjct: 1   MTVAPSLSRLHSPFLYCPLKPTPSTSLSVTFSGNQRSPPSYPRIRAIDLDQNTVVALSVG 60

Query: 61  LVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKCRFCMGTGNVTVELGGDEKE 120
           LVSVA+GIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQ+CRFCMGTGNVTVELGGD+KE
Sbjct: 61  LVSVAIGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQRCRFCMGTGNVTVELGGDDKE 120

Query: 121 VSRCINCEGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157
           VSRCINC+GVGTLTCTTCQGSGIQPRYLDRREFKDDD
Sbjct: 121 VSRCINCDGVGTLTCTTCQGSGIQPRYLDRREFKDDD 157

[Close]

BLAST of MC11g0113 vs. TAIR 10
Match: AT1G75690.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 234.6 bits (597), Expect = 5.5e-62
Identity = 116/156 (74.36%), Postives = 134/156 (85.90%), Query Frame = 0


Query: 3   TAPSLSRLHSPFLYSPLKPTSAASLSLTFSRNQRSPA-SYPRIRAIDLDQNTVVALSVGL 62
           +APS  RLHSPF++ P+  T     S   +RN RSP+ SYPRI+A +LD NTVVA+SVG+
Sbjct: 4   SAPSPPRLHSPFIHCPINFTP----SSFSARNLRSPSTSYPRIKA-ELDPNTVVAISVGV 63

Query: 63  VSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKCRFCMGTGNVTVELGGDEKEV 122
            SVA+GIGIPVFYETQIDNAAKRENTQPCFPC+G+GAQKCR C+G+GNVTVELGG EKEV
Sbjct: 64  ASVALGIGIPVFYETQIDNAAKRENTQPCFPCNGTGAQKCRLCVGSGNVTVELGGGEKEV 123

Query: 123 SRCINCEGVGTLTCTTCQGSGIQPRYLDRREFKDDD 158
           S CINC+G G+LTCTTCQGSG+QPRYLDRREFKDDD
Sbjct: 124 SNCINCDGAGSLTCTTCQGSGVQPRYLDRREFKDDD 154

[Close]

BLAST of MC11g0113 vs. TAIR 10
Match: AT2G24860.1 (DnaJ/Hsp40 cysteine-rich domain superfamily protein )

HSP 1 Score: 45.4 bits (106), Expect = 4.8e-05
Identity = 19/67 (28.36%), Postives = 36/67 (53.73%), Query Frame = 0


Query: 90  CFPCSGSGAQKCRFCMGTGNVTVELGGDE------KEVSRCINCEGVGTLTCTTCQGSGI 149
           C  C+  G  +C++C GTG   +   GD          + C+ C G G+ +C+ C+G+G 
Sbjct: 76  CSSCNSKGHVECKWCAGTGFFIL---GDNMLCQVPSRNTSCVICSGQGSASCSDCKGTGF 135

Query: 150 QPRYLDR 151
           + ++L++
Sbjct: 136 RAKWLEK 139

[Close]

BLAST of MC11g0113 vs. TAIR 10
Match: AT4G13670.1 (plastid transcriptionally active 5 )

HSP 1 Score: 42.7 bits (99), Expect = 3.1e-04
Identity = 31/101 (30.69%), Postives = 39/101 (38.61%), Query Frame = 0


Query: 45  RAIDLDQNTVVALSVGL---VSVAVGIGIPVFYETQIDNAAKRENTQPCFPCSGSGAQKC 104
           R +D+ QN V  L        S  +G   PV      D +        C  C G G   C
Sbjct: 289 REVDVTQNRVFLLGENRWEDPSRLIGRNKPV------DRSESTNTKTRCITCRGEGRLMC 348

Query: 105 RFCMGTGNVTVELGGDE--KEVSRCINCEGVGTLTCTTCQG 141
             C GTG   +E    E   E ++C  CEG+G   C  C G
Sbjct: 349 LECDGTGEPNIEPQFMEWVGEDTKCPYCEGLGYTVCDVCDG 383

The following BLAST results are available for this feature:

BLAST of MC11g0113 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
K4BVL1	3.4e-64	75.47	Protein SPA, chloroplastic OS=Solanum lycopersicum OX=4081 GN=SPA PE=2 SV=1	[more]
Q8GSJ6	7.8e-61	74.36	Protein disulfide-isomerase LQY1, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of MC11g0113 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142253.1	8.60e-109	100.00	protein SPA, chloroplastic [Momordica charantia]	[more]
XP_022936404.1	2.28e-104	94.90	protein SPA, chloroplastic [Cucurbita moschata] >XP_022975871.1 protein SPA, chl...	[more]
XP_038899789.1	2.66e-103	93.63	protein SPA, chloroplastic [Benincasa hispida]	[more]
XP_008466492.1	5.37e-103	94.27	PREDICTED: protein SPA, chloroplastic [Cucumis melo]	[more]
XP_004136388.1	1.27e-101	92.36	protein disulfide-isomerase LQY1, chloroplastic [Cucumis sativus] >KGN60026.1 hy...	[more]

BLAST of MC11g0113 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CMU6	4.16e-109	100.00	protein SPA, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012411 PE=4 S...	[more]
A0A6J1IFD3	1.10e-104	94.90	protein SPA, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111476444 PE=4 SV=1	[more]
A0A6J1F877	1.10e-104	94.90	protein SPA, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111443033 PE=4 SV...	[more]
A0A1S3CRE4	2.60e-103	94.27	protein SPA, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503884 PE=4 SV=1	[more]
A0A0A0LJ55	6.13e-102	92.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G872080 PE=4 SV=1	[more]

BLAST of MC11g0113 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75690.1	5.5e-62	74.36	DnaJ/Hsp40 cysteine-rich domain superfamily protein	[more]
AT2G24860.1	4.8e-05	28.36	DnaJ/Hsp40 cysteine-rich domain superfamily protein	[more]
AT4G13670.1	3.1e-04	30.69	plastid transcriptionally active 5	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR035272	Protein of unknown function DUF5351	PFAM	PF17302	DUF5351	coord: 101..132 e-value: 3.4E-10 score: 40.0
None	No IPR available	PANTHER	PTHR15852	PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN	coord: 4..156
None	No IPR available	PANTHER	PTHR15852:SF27	PROTEIN DISULFIDE-ISOMERASE LQY1, CHLOROPLASTIC	coord: 4..156
IPR036410	Heat shock protein DnaJ, cysteine-rich domain superfamily	SUPERFAMILY	57938	DnaJ/Hsp40 cysteine-rich domain	coord: 85..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g0113.1	MC11g0113.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010206	photosystem II repair
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003756	protein disulfide isomerase activity