MC11g0105 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g0105
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	gibberellin-regulated protein 1-like
Location	MC11: 765959 .. 768132 (+)
RNA-Seq Expression	MC11g0105
Synteny	MC11g0105

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: utr5CDSpolypeptideutr3

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAAAGCAACTTCTTTACCACACCTACCACAACCAGTCACGGAACATCCTAGATTTACCAAACTTCCTCGATTTCTTCACTTTATTAATTCTCTTCCTTAATTCGCCCTCTATAAACTCGGACAACCCCTCCATACGAAACACCATCCAGTTTTCAGCCATGGCAGTTACTAGAGCTCTTGTGTTTGCTATGCTTCTCATTTCTTTTGCCATTCTCCTTGTGGAATCAGGCCAAATGGTAAACAATGTCTTCCATTTGCTCTTTATTTGCTTCTGATACTTCTCTGAACCTTGTCGATATGTGCTATTGTCGGTCTTCAGGTTATCACTACTCGGGTCAATAACCCTCTTCCTCATGATATAGGTAAAAATGACCTAGCTTCGAACACTTGCACCCATGTTGTTGCGTTAATTCTTGTTGCTTACTTACCAAAGTCCTAGTCTCTCTTGCAGATTGTGGTGTGGCTTGTGATGCACGGTGCCAATTATCGTCGAGGCAGAAGATGTGTAAGAGGGCATGTGGAACCTGCTGCGCTCGCTGTCAATGTGTTCCACCGGGTACTTCGGGCAACTACGACGTTTGTCCCTGCTATGCCAATATGACCACACACGGTGGCAGGCACAAGTGTCCCTAGCCACTGTCGCTGGTTCTATGATGATTATGTTACATTTCACATCACAGATATCCGAAATAAAGATGTTACTATCAAGTTGGTCCTTTTCTGAATGTAATAAATTATTGAGATAACAACTTTTGAGTCTAGAAGTATATCAACAAGAATGAATTCTCTGTGGATTTCACTATTTATAGAAGGTTGATGTTCTGAAAATGTTCAAAAACTATGCAAGAGTGATGCAGGGGACTCAATTCTGTTCGATCTTTTTCTTCTTTGTTCTATTTATCACAACAATACCATACAGACAAATATACTATGGGAAAACAAATCAAACTGAAATCAGCAATATAATAAATTCTGTCATGGAAAATAAATTGCAATCTTAGCTCTCTAACATGCACTATCTTCACTCCAGCTTTTCCAGCTCCCCCATTCTTTCAATAATCGCCTGAAAACGGACAAAAAGTAATTAAAATGTTAGACCAAATACTACCATTTTAGCGAAATCCATATAAATCAACTACTAAAAACATAAGATTCTACGGAAACTAATACTAGAGCACATAATATGGTTTTATGGCTAGGCATAGAAAACCACTACTATTCTAGGAAGATACAAGATTGTGTTGACAGGTTTTTTGACAGTCAGGTAATGAGAAAAATCAGAGCAACTAAAAATAAACAGGCAACACTTTACCTTTTTGCTTGTTTCTTGGAGCTCTCCAGCAAGAATGAATTCGTCAAGTATCAGATAAACCTATATCAGATTCAGCACAAAAATGTGGATCGGTATGGTAGCAGTCAGCAGATTTAACACTACAGTTACAACACTAACAAATCTCAACTGTCTTCTGAAATTCCTCAAACGCATCCAAGCAAACACAATCATCAGATGATAAATGTTTACATTTTCAACCCAGAAACTGAAGGTAAAAAGAAATATATATGCAACTGCTGCCTAACTGACTGACCTAAGATATTGATACCAACTTAAAGAATTGAGAAAAAGCATAAGGAATTTAACCCCTGGTATCTACTGATTGAGACCACAATGCCATGACAGTATTTTAATTCACCGGGTAGTGGGGAGGAAACAATGTTATTCAATTAAGAAATGTACCAAAACCAGTCCAGCTAATTGATTCAGAAGTACAACAGAAAGACAAAGATACCATAATCTTCATTACACGTTAGAATGGAAGCAAGAATAAAGAAGAGGGCAAATTAAGATCAACAAACCTTGTGAAAGTTAAAAACCAAATCGAGCTCACAAACATTGCTGAAGAAGTGATCCAAAATCTCCACAAACAAATGAATACACTCGAGATATGCCAACTCATTGTCGGTTATGTCCACACAAAGAGAGAAAAATAACCCGGCATATCGTCTGTAGATTACCTTATGTGTTCGGAACTGCGAAAAGGGTTGAGGTTGCAATAAGCTAGAGCTTTAATAAAACCAAATGAACACATTACGCGACACACTAAAATAAGTAAACAAATCTTAAGACTCATACCCGAAAAGAACTGAAAAATGTCAACCGAAATGAAATAAATC

mRNA sequence

CTCAAAGCAACTTCTTTACCACACCTACCACAACCAGTCACGGAACATCCTAGATTTACCAAACTTCCTCGATTTCTTCACTTTATTAATTCTCTTCCTTAATTCGCCCTCTATAAACTCGGACAACCCCTCCATACGAAACACCATCCAGTTTTCAGCCATGGCAGTTACTAGAGCTCTTGTGTTTGCTATGCTTCTCATTTCTTTTGCCATTCTCCTTGTGGAATCAGGCCAAATGGTTATCACTACTCGGGTCAATAACCCTCTTCCTCATGATATAGATTGTGGTGTGGCTTGTGATGCACGGTGCCAATTATCGTCGAGGCAGAAGATGTGTAAGAGGGCATGTGGAACCTGCTGCGCTCGCTGTCAATGTGTTCCACCGGGTACTTCGGGCAACTACGACGTTTGTCCCTGCTATGCCAATATGACCACACACGGTGGCAGGCACAAGTGTCCCTAGCCACTGTCGCTGGTTCTATGATGATTATGTTACATTTCACATCACAGATATCCGAAATAAAGATGTTACTATCAAGTTGGTCCTTTTCTGAATGTAATAAATTATTGAGATAACAACTTTTGAGTCTAGAAGTATATCAACAAGAATGAATTCTCTGTGGATTTCACTATTTATAGAAGGTTGATGTTCTGAAAATGTTCAAAAACTATGCAAGAGTGATGCAGGGGACTCAATTCTGTTCGATCTTTTTCTTCTTTGTTCTATTTATCACAACAATACCATACAGACAAATATACTATGGGAAAACAAATCAAACTGAAATCAGCAATATAATAAATTCTGTCATGGAAAATAAATTGCAATCTTAGCTCTCTAACATGCACTATCTTCACTCCAGCTTTTCCAGCTCCCCCATTCTTTCAATAATCGCCTGAAAACGGACAAAAAGTAATTAAAATGTTAGACCAAATACTACCATTTTAGCGAAATCCATATAAATCAACTACTAAAAACATAAGATTCTACGGAAACTAATACTAGAGCACATAATATGGTTTTATGGCTAGGCATAGAAAACCACTACTATTCTAGGAAGATACAAGATTGTGTTGACAGGTTTTTTGACAGTCAGGTAATGAGAAAAATCAGAGCAACTAAAAATAAACAGGCAACACTTTACCTTTTTGCTTGTTTCTTGGAGCTCTCCAGCAAGAATGAATTCGTCAAGTATCAGATAAACCTATATCAGATTCAGCACAAAAATGTGGATCGGTATGGTAGCAGTCAGCAGATTTAACACTACAGTTACAACACTAACAAATCTCAACTGTCTTCTGAAATTCCTCAAACGCATCCAAGCAAACACAATCATCAGATGATAAATGTTTACATTTTCAACCCAGAAACTGAAGGTAAAAAGAAATATATATGCAACTGCTGCCTAACTGACTGACCTAAGATATTGATACCAACTTAAAGAATTGAGAAAAAGCATAAGGAATTTAACCCCTGGTATCTACTGATTGAGACCACAATGCCATGACAGTATTTTAATTCACCGGGTAGTGGGGAGGAAACAATGTTATTCAATTAAGAAATGTACCAAAACCAGTCCAGCTAATTGATTCAGAAGTACAACAGAAAGACAAAGATACCATAATCTTCATTACACGTTAGAATGGAAGCAAGAATAAAGAAGAGGGCAAATTAAGATCAACAAACCTTGTGAAAGTTAAAAACCAAATCGAGCTCACAAACATTGCTGAAGAAGTGATCCAAAATCTCCACAAACAAATGAATACACTCGAGATATGCCAACTCATTGTCGGTTATGTCCACACAAAGAGAGAAAAATAACCCGGCATATCGTCTGTAGATTACCTTATGTGTTCGGAACTGCGAAAAGGGTTGAGGTTGCAATAAGCTAGAGCTTTAATAAAACCAAATGAACACATTACGCGACACACTAAAATAAGTAAACAAATCTTAAGACTCATACCCGAAAAGAACTGAAAAATGTCAACCGAAATGAAATAAATC

Coding sequence (CDS)

TCAAAGCAACTTCTTTACCACACCTACCACAACCAGTCACGGAACATCCTAGATTTACCAAACTTCCTCGATTTCTTCACTTTATTAATTCTCTTCCTTAATTCGCCCTCTATAAACTCGGACAACCCCTCCATACGAAACACCATCCAGTTTTCAGCCATGGCAGTTACTAGAGCTCTTGTGTTTGCTATGCTTCTCATTTCTTTTGCCATTCTCCTTGTGGAATCAGGCCAAATGGTTATCACTACTCGGGTCAATAACCCTCTTCCTCATGATATAGATTGTGGTGTGGCTTGTGATGCACGGTGCCAATTATCGTCGAGGCAGAAGATGTGTAAGAGGGCATGTGGAACCTGCTGCGCTCGCTGTCAATGTGTTCCACCGGGTACTTCGGGCAACTACGACGTTTGTCCCTGCTATGCCAATATGACCACACACGGTGGCAGGCACAAGTGTCCCTAG

Protein sequence

SKQLLYHTYHNQSRNILDLPNFLDFFTLLILFLNSPSINSDNPSIRNTIQFSAMAVTRALVFAMLLISFAILLVESGQMVITTRVNNPLPHDIDCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP

Homology

[Close]

BLAST of MC11g0105 vs. ExPASy Swiss-Prot
Match: Q93X17 (Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.8e-25
Identity = 60/107 (56.07%), Postives = 77/107 (71.96%), Query Frame = 0


Query: 54  MAVTRALVFAMLLISFAILLVESGQMVITTRVNNPLPHD-------IDCGVACDARCQLS 113
           MA+++AL FA LL+S  +LL+E  Q + T +V +    +       IDCG AC ARC+LS
Sbjct: 1   MAISKAL-FASLLLS--LLLLEQVQSIQTDQVTSNAISEAAYSYKKIDCGGACAARCRLS 60

Query: 114 SRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 154
           SR ++C RACGTCCARC CVPPGTSGN + CPCYA++TTHG + KCP
Sbjct: 61  SRPRLCNRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104

[Close]

BLAST of MC11g0105 vs. ExPASy Swiss-Prot
Match: P46689 (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV=2)

HSP 1 Score: 114.8 bits (286), Expect = 8.8e-25
Identity = 54/100 (54.00%), Postives = 71/100 (71.00%), Query Frame = 0


Query: 54  MAVTRALVFAMLLISFAILLVESGQMVITTRVNNPLPHDIDCGVACDARCQLSSRQKMCK 113
           MA+++AL+ ++L+    + LV++   V  ++  N     IDCG AC ARC+LS R ++C 
Sbjct: 1   MAISKALIASLLISLLVLQLVQAD--VENSQKKNGYAKKIDCGSACVARCRLSRRPRLCH 60

Query: 114 RACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 154
           RACGTCC RC CVPPGT GNYD C CYA++TTHGGR KCP
Sbjct: 61  RACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98

[Close]

BLAST of MC11g0105 vs. ExPASy Swiss-Prot
Match: F4IQJ4 (Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.7e-23
Identity = 59/100 (59.00%), Postives = 65/100 (65.00%), Query Frame = 0


Query: 54  MAVTRALVFAMLLISFAILLVESGQMVITTRVNNPLPHDIDCGVACDARCQLSSRQKMCK 113
           MAV R L+ A LLIS  +L      MV     +N  P  IDC   C  RC LSSR  +C 
Sbjct: 1   MAVFRVLL-ASLLISLLVLDFVHADMV----TSNDAP-KIDCNSRCQERCSLSSRPNLCH 60

Query: 114 RACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 154
           RACGTCCARC CV PGTSGNYD CPCY ++TTHGGR KCP
Sbjct: 61  RACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRRKCP 94

[Close]

BLAST of MC11g0105 vs. ExPASy Swiss-Prot
Match: P46688 (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.2e-20
Identity = 42/61 (68.85%), Postives = 48/61 (78.69%), Query Frame = 0


Query: 93  IDCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKC 152
           IDCG  C  RC  SSR K+C RAC +CC+RC CVPPGTSGN  +CPCYA++TTHGGR KC
Sbjct: 39  IDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKC 98

Query: 153 P 154
           P
Sbjct: 99  P 99

[Close]

BLAST of MC11g0105 vs. ExPASy Swiss-Prot
Match: Q8GWK5 (Gibberellin-regulated protein 9 OS=Arabidopsis thaliana OX=3702 GN=GASA9 PE=3 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.5e-19
Identity = 40/61 (65.57%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 93  IDCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKC 152
           I+CG AC  RC  +SR+K+C RACG+CCA+CQCVPPGTSGN   CPCYA++ THG + KC
Sbjct: 59  INCGHACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKC 118

Query: 153 P 154
           P
Sbjct: 119 P 119

[Close]

BLAST of MC11g0105 vs. NCBI nr
Match: XP_022142565.1 (gibberellin-regulated protein 1-like [Momordica charantia])

HSP 1 Score: 208 bits (530), Expect = 5.41e-67
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 54  MAVTRALVFAMLLISFAILLVESGQMVITTRVNNPLPHDIDCGVACDARCQLSSRQKMCK 113
           MAVTRALVFAMLLISFAILLVESGQMVITTRVNNPLPHDIDCGVACDARCQLSSRQKMCK
Sbjct: 1   MAVTRALVFAMLLISFAILLVESGQMVITTRVNNPLPHDIDCGVACDARCQLSSRQKMCK 60

Query: 114 RACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 153
           RACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
Sbjct: 61  RACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 100

[Close]

BLAST of MC11g0105 vs. NCBI nr
Match: XP_008466485.1 (PREDICTED: gibberellin-regulated protein 1-like [Cucumis melo] >KAA0063283.1 gibberellin-regulated protein 1-like [Cucumis melo var. makuwa] >TYK31492.1 gibberellin-regulated protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 185 bits (470), Expect = 7.52e-58
Identity = 85/100 (85.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 54  MAVTRALVFAMLLISFAILLVESGQMVITTRVNNPLPHDIDCGVACDARCQLSSRQKMCK 113
           MA T+ LVF MLLI+FA+LL+ESGQM+ITT+V+NPLP +IDCG ACDARC+LSSRQK+CK
Sbjct: 1   MAATKGLVFVMLLIAFAMLLMESGQMIITTQVDNPLPQEIDCGKACDARCRLSSRQKICK 60

Query: 114 RACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 153
           RACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
Sbjct: 61  RACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 100

[Close]

BLAST of MC11g0105 vs. NCBI nr
Match: XP_004136384.1 (gibberellin-regulated protein 1 [Cucumis sativus])

HSP 1 Score: 180 bits (457), Expect = 7.18e-56
Identity = 82/100 (82.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 54  MAVTRALVFAMLLISFAILLVESGQMVITTRVNNPLPHDIDCGVACDARCQLSSRQKMCK 113
           MA T+ L+F +LLI+FA+LL+ESGQMVITT+V+NPLP DIDCG ACDARC+LSSRQK+C+
Sbjct: 1   MAATKGLMFVLLLIAFAMLLMESGQMVITTQVDNPLPQDIDCGEACDARCRLSSRQKICE 60

Query: 114 RACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 153
           RACGTCC+RCQCVPPGTSGNYD CPCYANMTTHGGRHKCP
Sbjct: 61  RACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP 100

[Close]

BLAST of MC11g0105 vs. NCBI nr
Match: XP_022975660.1 (snakin-2-like [Cucurbita maxima])

HSP 1 Score: 180 bits (456), Expect = 1.05e-55
Identity = 86/101 (85.15%), Postives = 94/101 (93.07%), Query Frame = 0


Query: 54  MAVTRALVFAMLLISFA-ILLVESGQMVITTRVNNPLPHDIDCGVACDARCQLSSRQKMC 113
           MA T+ LVFAMLLISFA +LL+ES QMVITT+V++PLP +IDCG  CDARCQLSSRQK+C
Sbjct: 1   MAATKGLVFAMLLISFAFVLLMESAQMVITTQVDSPLPDEIDCGEVCDARCQLSSRQKIC 60

Query: 114 KRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 153
           KRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
Sbjct: 61  KRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 101

[Close]

BLAST of MC11g0105 vs. NCBI nr
Match: XP_023535343.1 (gibberellin-regulated protein 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 179 bits (455), Expect = 1.49e-55
Identity = 86/101 (85.15%), Postives = 94/101 (93.07%), Query Frame = 0


Query: 54  MAVTRALVFAMLLISFA-ILLVESGQMVITTRVNNPLPHDIDCGVACDARCQLSSRQKMC 113
           MA T+ LVFAMLLI+FA +LLVES QM ITT+V++PLP +IDCG ACDARCQLSSRQK+C
Sbjct: 1   MAATKGLVFAMLLIAFAFVLLVESAQMAITTQVDSPLPGEIDCGEACDARCQLSSRQKIC 60

Query: 114 KRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 153
           KRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
Sbjct: 61  KRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 101

[Close]

BLAST of MC11g0105 vs. ExPASy TrEMBL
Match: A0A6J1CLA3 (gibberellin-regulated protein 1-like OS=Momordica charantia OX=3673 GN=LOC111012644 PE=3 SV=1)

HSP 1 Score: 208 bits (530), Expect = 2.62e-67
Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 0


Query: 54  MAVTRALVFAMLLISFAILLVESGQMVITTRVNNPLPHDIDCGVACDARCQLSSRQKMCK 113
           MAVTRALVFAMLLISFAILLVESGQMVITTRVNNPLPHDIDCGVACDARCQLSSRQKMCK
Sbjct: 1   MAVTRALVFAMLLISFAILLVESGQMVITTRVNNPLPHDIDCGVACDARCQLSSRQKMCK 60

Query: 114 RACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 153
           RACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
Sbjct: 61  RACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 100

[Close]

BLAST of MC11g0105 vs. ExPASy TrEMBL
Match: A0A5A7V5C1 (Gibberellin-regulated protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G008080 PE=3 SV=1)

HSP 1 Score: 185 bits (470), Expect = 3.64e-58
Identity = 85/100 (85.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 54  MAVTRALVFAMLLISFAILLVESGQMVITTRVNNPLPHDIDCGVACDARCQLSSRQKMCK 113
           MA T+ LVF MLLI+FA+LL+ESGQM+ITT+V+NPLP +IDCG ACDARC+LSSRQK+CK
Sbjct: 1   MAATKGLVFVMLLIAFAMLLMESGQMIITTQVDNPLPQEIDCGKACDARCRLSSRQKICK 60

Query: 114 RACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 153
           RACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
Sbjct: 61  RACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 100

[Close]

BLAST of MC11g0105 vs. ExPASy TrEMBL
Match: A0A1S3CRE3 (gibberellin-regulated protein 1-like OS=Cucumis melo OX=3656 GN=LOC103503877 PE=3 SV=1)

HSP 1 Score: 185 bits (470), Expect = 3.64e-58
Identity = 85/100 (85.00%), Postives = 95/100 (95.00%), Query Frame = 0


Query: 54  MAVTRALVFAMLLISFAILLVESGQMVITTRVNNPLPHDIDCGVACDARCQLSSRQKMCK 113
           MA T+ LVF MLLI+FA+LL+ESGQM+ITT+V+NPLP +IDCG ACDARC+LSSRQK+CK
Sbjct: 1   MAATKGLVFVMLLIAFAMLLMESGQMIITTQVDNPLPQEIDCGKACDARCRLSSRQKICK 60

Query: 114 RACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 153
           RACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
Sbjct: 61  RACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 100

[Close]

BLAST of MC11g0105 vs. ExPASy TrEMBL
Match: A0A0A0LGH8 (Gibberellin-regulated protein 1 OS=Cucumis sativus OX=3659 GN=Csa_3G872160 PE=3 SV=1)

HSP 1 Score: 180 bits (457), Expect = 3.48e-56
Identity = 82/100 (82.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 54  MAVTRALVFAMLLISFAILLVESGQMVITTRVNNPLPHDIDCGVACDARCQLSSRQKMCK 113
           MA T+ L+F +LLI+FA+LL+ESGQMVITT+V+NPLP DIDCG ACDARC+LSSRQK+C+
Sbjct: 1   MAATKGLMFVLLLIAFAMLLMESGQMVITTQVDNPLPQDIDCGEACDARCRLSSRQKICE 60

Query: 114 RACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 153
           RACGTCC+RCQCVPPGTSGNYD CPCYANMTTHGGRHKCP
Sbjct: 61  RACGTCCSRCQCVPPGTSGNYDFCPCYANMTTHGGRHKCP 100

[Close]

BLAST of MC11g0105 vs. ExPASy TrEMBL
Match: A0A6J1IHC1 (snakin-2-like OS=Cucurbita maxima OX=3661 GN=LOC111475493 PE=3 SV=1)

HSP 1 Score: 180 bits (456), Expect = 5.09e-56
Identity = 86/101 (85.15%), Postives = 94/101 (93.07%), Query Frame = 0


Query: 54  MAVTRALVFAMLLISFA-ILLVESGQMVITTRVNNPLPHDIDCGVACDARCQLSSRQKMC 113
           MA T+ LVFAMLLISFA +LL+ES QMVITT+V++PLP +IDCG  CDARCQLSSRQK+C
Sbjct: 1   MAATKGLVFAMLLISFAFVLLMESAQMVITTQVDSPLPDEIDCGEVCDARCQLSSRQKIC 60

Query: 114 KRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 153
           KRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP
Sbjct: 61  KRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 101

[Close]

BLAST of MC11g0105 vs. TAIR 10
Match: AT1G75750.2 (GAST1 protein homolog 1 )

HSP 1 Score: 115.5 bits (288), Expect = 3.7e-26
Identity = 53/100 (53.00%), Postives = 71/100 (71.00%), Query Frame = 0


Query: 54  MAVTRALVFAMLLISFAILLVESGQMVITTRVNNPLPHDIDCGVACDARCQLSSRQKMCK 113
           MA+++AL+ ++L+    + LV++ +    ++  N     IDCG AC ARC+LS R ++C 
Sbjct: 1   MAISKALIASLLISLLVLQLVQADE---NSQKKNGYAKKIDCGSACVARCRLSRRPRLCH 60

Query: 114 RACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 154
           RACGTCC RC CVPPGT GNYD C CYA++TTHGGR KCP
Sbjct: 61  RACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 97

[Close]

BLAST of MC11g0105 vs. TAIR 10
Match: AT1G75750.1 (GAST1 protein homolog 1 )

HSP 1 Score: 114.8 bits (286), Expect = 6.2e-26
Identity = 54/100 (54.00%), Postives = 71/100 (71.00%), Query Frame = 0


Query: 54  MAVTRALVFAMLLISFAILLVESGQMVITTRVNNPLPHDIDCGVACDARCQLSSRQKMCK 113
           MA+++AL+ ++L+    + LV++   V  ++  N     IDCG AC ARC+LS R ++C 
Sbjct: 1   MAISKALIASLLISLLVLQLVQAD--VENSQKKNGYAKKIDCGSACVARCRLSRRPRLCH 60

Query: 114 RACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 154
           RACGTCC RC CVPPGT GNYD C CYA++TTHGGR KCP
Sbjct: 61  RACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98

[Close]

BLAST of MC11g0105 vs. TAIR 10
Match: AT2G18420.1 (Gibberellin-regulated family protein )

HSP 1 Score: 110.5 bits (275), Expect = 1.2e-24
Identity = 59/100 (59.00%), Postives = 65/100 (65.00%), Query Frame = 0


Query: 54  MAVTRALVFAMLLISFAILLVESGQMVITTRVNNPLPHDIDCGVACDARCQLSSRQKMCK 113
           MAV R L+ A LLIS  +L      MV     +N  P  IDC   C  RC LSSR  +C 
Sbjct: 1   MAVFRVLL-ASLLISLLVLDFVHADMV----TSNDAP-KIDCNSRCQERCSLSSRPNLCH 60

Query: 114 RACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 154
           RACGTCCARC CV PGTSGNYD CPCY ++TTHGGR KCP
Sbjct: 61  RACGTCCARCNCVAPGTSGNYDKCPCYGSLTTHGGRRKCP 94

[Close]

BLAST of MC11g0105 vs. TAIR 10
Match: AT4G09610.1 (GAST1 protein homolog 2 )

HSP 1 Score: 100.1 bits (248), Expect = 1.6e-21
Identity = 42/61 (68.85%), Postives = 48/61 (78.69%), Query Frame = 0


Query: 93  IDCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKC 152
           IDCG  C  RC  SSR K+C RAC +CC+RC CVPPGTSGN  +CPCYA++TTHGGR KC
Sbjct: 39  IDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKC 98

Query: 153 P 154
           P
Sbjct: 99  P 99

[Close]

BLAST of MC11g0105 vs. TAIR 10
Match: AT1G22690.1 (Gibberellin-regulated family protein )

HSP 1 Score: 96.7 bits (239), Expect = 1.8e-20
Identity = 40/61 (65.57%), Postives = 49/61 (80.33%), Query Frame = 0


Query: 93  IDCGVACDARCQLSSRQKMCKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKC 152
           I+CG AC  RC  +SR+K+C RACG+CCA+CQCVPPGTSGN   CPCYA++ THG + KC
Sbjct: 59  INCGHACARRCSKTSRKKVCHRACGSCCAKCQCVPPGTSGNTASCPCYASIRTHGNKLKC 118

Query: 153 P 154
           P
Sbjct: 119 P 119

The following BLAST results are available for this feature:

BLAST of MC11g0105 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93X17	1.8e-25	56.07	Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1	[more]
P46689	8.8e-25	54.00	Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV...	[more]
F4IQJ4	1.7e-23	59.00	Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 ...	[more]
P46688	2.2e-20	68.85	Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV...	[more]
Q8GWK5	2.5e-19	65.57	Gibberellin-regulated protein 9 OS=Arabidopsis thaliana OX=3702 GN=GASA9 PE=3 SV...	[more]

BLAST of MC11g0105 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022142565.1	5.41e-67	100.00	gibberellin-regulated protein 1-like [Momordica charantia]	[more]
XP_008466485.1	7.52e-58	85.00	PREDICTED: gibberellin-regulated protein 1-like [Cucumis melo] >KAA0063283.1 gib...	[more]
XP_004136384.1	7.18e-56	82.00	gibberellin-regulated protein 1 [Cucumis sativus]	[more]
XP_022975660.1	1.05e-55	85.15	snakin-2-like [Cucurbita maxima]	[more]
XP_023535343.1	1.49e-55	85.15	gibberellin-regulated protein 11-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MC11g0105 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CLA3	2.62e-67	100.00	gibberellin-regulated protein 1-like OS=Momordica charantia OX=3673 GN=LOC111012...	[more]
A0A5A7V5C1	3.64e-58	85.00	Gibberellin-regulated protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3CRE3	3.64e-58	85.00	gibberellin-regulated protein 1-like OS=Cucumis melo OX=3656 GN=LOC103503877 PE=...	[more]
A0A0A0LGH8	3.48e-56	82.00	Gibberellin-regulated protein 1 OS=Cucumis sativus OX=3659 GN=Csa_3G872160 PE=3 ...	[more]
A0A6J1IHC1	5.09e-56	85.15	snakin-2-like OS=Cucurbita maxima OX=3661 GN=LOC111475493 PE=3 SV=1	[more]

BLAST of MC11g0105 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75750.2	3.7e-26	53.00	GAST1 protein homolog 1	[more]
AT1G75750.1	6.2e-26	54.00	GAST1 protein homolog 1	[more]
AT2G18420.1	1.2e-24	59.00	Gibberellin-regulated family protein	[more]
AT4G09610.1	1.6e-21	68.85	GAST1 protein homolog 2	[more]
AT1G22690.1	1.8e-20	65.57	Gibberellin-regulated family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 94..153 e-value: 1.3E-22 score: 79.7
None	No IPR available	PANTHER	PTHR23201:SF104	GIBBERELLIN-REGULATED PROTEIN 1	coord: 54..153
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 54..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g0105.1	MC11g0105.1	mRNA